Multiple sequence alignment - TraesCS1B01G374100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G374100 chr1B 100.000 5857 0 0 1 5857 604548290 604554146 0.000000e+00 10816
1 TraesCS1B01G374100 chr1B 94.413 179 6 3 5589 5766 47231137 47231312 7.480000e-69 272
2 TraesCS1B01G374100 chr1B 92.529 174 0 3 4294 4454 604552414 604552587 2.730000e-58 237
3 TraesCS1B01G374100 chr1B 92.529 174 0 3 4125 4298 604552583 604552743 2.730000e-58 237
4 TraesCS1B01G374100 chr1D 90.201 3041 179 44 1 2984 444361452 444364430 0.000000e+00 3855
5 TraesCS1B01G374100 chr1D 96.523 1323 28 5 2981 4298 444364466 444365775 0.000000e+00 2172
6 TraesCS1B01G374100 chr1D 89.828 1278 83 26 4294 5534 444365610 444366877 0.000000e+00 1596
7 TraesCS1B01G374100 chr1D 82.667 225 33 4 5542 5766 57501699 57501917 1.670000e-45 195
8 TraesCS1B01G374100 chr1D 84.021 194 23 7 5556 5747 112914793 112914606 4.660000e-41 180
9 TraesCS1B01G374100 chr1A 95.329 1306 47 4 2981 4285 540050073 540051365 0.000000e+00 2061
10 TraesCS1B01G374100 chr1A 92.438 1296 84 12 1685 2971 540048731 540050021 0.000000e+00 1838
11 TraesCS1B01G374100 chr1A 86.103 1691 111 44 1 1641 540047104 540048720 0.000000e+00 1707
12 TraesCS1B01G374100 chr1A 90.179 896 63 16 4648 5531 540051535 540052417 0.000000e+00 1144
13 TraesCS1B01G374100 chr1A 89.198 324 31 2 4294 4616 540051217 540051537 9.140000e-108 401
14 TraesCS1B01G374100 chr4D 83.258 221 28 7 5547 5763 505925123 505925338 1.670000e-45 195
15 TraesCS1B01G374100 chr6B 86.624 157 21 0 3031 3187 241145742 241145586 2.170000e-39 174
16 TraesCS1B01G374100 chr2A 81.690 213 33 6 5558 5766 195065679 195065469 7.800000e-39 172
17 TraesCS1B01G374100 chr4B 82.902 193 25 7 5557 5745 645306674 645306862 3.630000e-37 167
18 TraesCS1B01G374100 chr3A 82.540 189 30 2 5558 5746 108490018 108489833 4.700000e-36 163
19 TraesCS1B01G374100 chr2B 82.840 169 28 1 5578 5746 780496648 780496815 3.660000e-32 150
20 TraesCS1B01G374100 chr5B 80.500 200 29 5 5550 5746 450417336 450417144 1.700000e-30 145


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G374100 chr1B 604548290 604554146 5856 False 3763.333333 10816 95.019333 1 5857 3 chr1B.!!$F2 5856
1 TraesCS1B01G374100 chr1D 444361452 444366877 5425 False 2541.000000 3855 92.184000 1 5534 3 chr1D.!!$F2 5533
2 TraesCS1B01G374100 chr1A 540047104 540052417 5313 False 1430.200000 2061 90.649400 1 5531 5 chr1A.!!$F1 5530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
364 381 0.246086 CTCACTGGCTCACTCACTCC 59.754 60.0 0.0 0.0 0.0 3.85 F
1247 1313 0.035056 ACAGAGGGTATGTTGCTGCC 60.035 55.0 0.0 0.0 0.0 4.85 F
1810 1886 0.109132 GGGCTTTCCGTGCATTGAAG 60.109 55.0 0.0 0.0 0.0 3.02 F
3145 3273 0.035739 TAAGCCGTGTCTGGAAACCC 59.964 55.0 0.0 0.0 0.0 4.11 F
4490 4623 0.190815 AAAGTGTTCCAGGCCCCAAT 59.809 50.0 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1457 1523 0.239347 CGGCTGCTTGTTCTTCCTTG 59.761 55.000 0.00 0.00 0.00 3.61 R
3079 3207 1.492176 GCTGAATTGGGATCCCTCTCA 59.508 52.381 31.05 25.41 36.94 3.27 R
3263 3391 0.038166 GGGATGGGCTCAACTGACAA 59.962 55.000 0.00 0.00 0.00 3.18 R
4633 4766 0.604578 ATGGATGCCAGTGTGTTTGC 59.395 50.000 0.00 0.00 36.75 3.68 R
5694 5890 0.324943 ACAAAGCACTGCTATCCCGT 59.675 50.000 3.33 0.00 38.25 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
179 180 1.163420 TCAAAACTCACCGCACGCAT 61.163 50.000 0.00 0.00 0.00 4.73
261 274 4.592192 CATCGAGACGGGGCGCAT 62.592 66.667 10.83 0.00 0.00 4.73
262 275 2.910479 ATCGAGACGGGGCGCATA 60.910 61.111 10.83 0.00 0.00 3.14
264 277 4.944372 CGAGACGGGGCGCATACC 62.944 72.222 10.83 7.41 0.00 2.73
286 299 0.915872 AGCCCCACATGTCATGGAGA 60.916 55.000 17.08 0.00 39.87 3.71
290 303 1.561076 CCCACATGTCATGGAGAAGGA 59.439 52.381 17.08 0.00 39.87 3.36
333 346 1.376424 CCACGCTTCACTGGCTCAT 60.376 57.895 0.00 0.00 0.00 2.90
358 375 1.255882 CTCTCACTCACTGGCTCACT 58.744 55.000 0.00 0.00 0.00 3.41
360 377 0.964700 CTCACTCACTGGCTCACTCA 59.035 55.000 0.00 0.00 0.00 3.41
362 379 0.678395 CACTCACTGGCTCACTCACT 59.322 55.000 0.00 0.00 0.00 3.41
364 381 0.246086 CTCACTGGCTCACTCACTCC 59.754 60.000 0.00 0.00 0.00 3.85
365 382 1.188219 TCACTGGCTCACTCACTCCC 61.188 60.000 0.00 0.00 0.00 4.30
366 383 1.157276 ACTGGCTCACTCACTCCCT 59.843 57.895 0.00 0.00 0.00 4.20
368 385 0.248843 CTGGCTCACTCACTCCCTTC 59.751 60.000 0.00 0.00 0.00 3.46
372 389 2.224646 GGCTCACTCACTCCCTTCTTTT 60.225 50.000 0.00 0.00 0.00 2.27
455 478 2.101582 GCTGCTGCTACTACACTACCAT 59.898 50.000 8.53 0.00 36.03 3.55
464 495 2.292257 ACTACACTACCATCCAGCCAGA 60.292 50.000 0.00 0.00 0.00 3.86
614 651 3.917760 CGCTCCCCAGATCCGTCC 61.918 72.222 0.00 0.00 0.00 4.79
642 679 3.237741 GCCCCCTAGATCTGCGCT 61.238 66.667 9.73 0.00 0.00 5.92
658 707 2.583593 CTAGGGCGCTGCTTCGAC 60.584 66.667 14.51 0.00 36.59 4.20
785 834 1.732259 CTCGTTTGATCCGTTTCTGGG 59.268 52.381 0.00 0.00 0.00 4.45
794 843 4.277423 TGATCCGTTTCTGGGTTTCTTTTC 59.723 41.667 0.00 0.00 0.00 2.29
795 844 3.893521 TCCGTTTCTGGGTTTCTTTTCT 58.106 40.909 0.00 0.00 0.00 2.52
796 845 3.881089 TCCGTTTCTGGGTTTCTTTTCTC 59.119 43.478 0.00 0.00 0.00 2.87
797 846 3.630312 CCGTTTCTGGGTTTCTTTTCTCA 59.370 43.478 0.00 0.00 0.00 3.27
869 924 1.682344 GGGGGTTTGAGTGGATGCC 60.682 63.158 0.00 0.00 0.00 4.40
894 949 1.947456 GTTCTGCCGGTTTTTCTCTGT 59.053 47.619 1.90 0.00 0.00 3.41
912 967 2.174060 GTGTAACAATTAGCTGCGGC 57.826 50.000 10.33 10.33 36.32 6.53
1096 1151 3.751698 GGCCAAGGATTTATCGGTATGTC 59.248 47.826 0.00 0.00 0.00 3.06
1125 1180 6.099557 ACTTGGATTGGAGGTGAAAATTGAAA 59.900 34.615 0.00 0.00 0.00 2.69
1224 1290 3.861797 ATGCGTAGAAGGCCGGGG 61.862 66.667 2.18 0.00 0.00 5.73
1247 1313 0.035056 ACAGAGGGTATGTTGCTGCC 60.035 55.000 0.00 0.00 0.00 4.85
1325 1391 4.088762 CCGCGCAACAATGACGCT 62.089 61.111 8.75 0.00 44.36 5.07
1457 1523 4.162690 AATGACCCGGAGCGGCTC 62.163 66.667 21.57 21.57 46.86 4.70
1568 1642 7.500720 AAAATGATCAGAAAAAGGGCAAAAG 57.499 32.000 0.09 0.00 0.00 2.27
1670 1746 8.655935 ATCATTTCACCCTCTTAATGTTCTTT 57.344 30.769 0.00 0.00 31.59 2.52
1671 1747 8.477419 TCATTTCACCCTCTTAATGTTCTTTT 57.523 30.769 0.00 0.00 31.59 2.27
1672 1748 8.923270 TCATTTCACCCTCTTAATGTTCTTTTT 58.077 29.630 0.00 0.00 31.59 1.94
1722 1798 5.776744 AGCTGCTACAAAAGAAATTCTTGG 58.223 37.500 9.21 7.46 36.71 3.61
1723 1799 5.302823 AGCTGCTACAAAAGAAATTCTTGGT 59.697 36.000 9.21 12.60 36.71 3.67
1744 1820 6.459923 TGGTATAGCCATTTGGTTTGTTTTC 58.540 36.000 0.00 0.00 43.61 2.29
1810 1886 0.109132 GGGCTTTCCGTGCATTGAAG 60.109 55.000 0.00 0.00 0.00 3.02
1882 1958 1.294659 CTGCTTCAACTCTCCGTGCC 61.295 60.000 0.00 0.00 0.00 5.01
1921 1997 1.448985 TCCAAGCTATTGTTCGTGGC 58.551 50.000 0.00 0.00 34.39 5.01
1924 2000 1.131126 CAAGCTATTGTTCGTGGCAGG 59.869 52.381 0.00 0.00 0.00 4.85
1936 2012 1.609061 CGTGGCAGGAATGTCAGACTT 60.609 52.381 0.00 0.00 0.00 3.01
1999 2075 5.938125 GCAGAAGTCTGTGGTAAATTCCTTA 59.062 40.000 9.94 0.00 45.45 2.69
2013 2089 9.327628 GGTAAATTCCTTACTCATTCTAGTTCC 57.672 37.037 0.00 0.00 39.98 3.62
2042 2118 8.659491 CAATACCTGATATATTGTTCATCGTGG 58.341 37.037 0.00 0.00 35.95 4.94
2123 2200 9.552114 GATGCTCATGATTTTATTAGTATGTGC 57.448 33.333 0.00 0.00 36.28 4.57
2155 2232 2.602257 TGCAAGATGTGAGATACGGG 57.398 50.000 0.00 0.00 0.00 5.28
2158 2235 3.068165 TGCAAGATGTGAGATACGGGTAG 59.932 47.826 0.00 0.00 0.00 3.18
2172 2249 3.671716 ACGGGTAGGCTAAAACAAGAAG 58.328 45.455 0.00 0.00 0.00 2.85
2173 2250 3.325716 ACGGGTAGGCTAAAACAAGAAGA 59.674 43.478 0.00 0.00 0.00 2.87
2194 2271 9.088987 AGAAGAAATAAGTTTTCATTAAGGCCA 57.911 29.630 5.01 0.00 0.00 5.36
2262 2339 2.839486 TTCTCCTTCAAGCGTCATGT 57.161 45.000 0.00 0.00 0.00 3.21
2301 2378 9.855361 TTGTTTGCATACAAAATGTTAAATTCG 57.145 25.926 18.69 0.00 46.94 3.34
2310 2387 5.913137 AAATGTTAAATTCGGCTCATGGA 57.087 34.783 0.00 0.00 0.00 3.41
2318 2395 3.988379 TTCGGCTCATGGAATAATTGC 57.012 42.857 0.00 0.00 0.00 3.56
2319 2396 3.213206 TCGGCTCATGGAATAATTGCT 57.787 42.857 0.00 0.00 0.00 3.91
2386 2467 9.582431 TTAGATTTCTTTATAGTTGAGTGACGG 57.418 33.333 0.00 0.00 0.00 4.79
2414 2495 6.582677 TTGTAAAGACAATATGGTTGGTGG 57.417 37.500 0.00 0.00 40.72 4.61
2420 2501 5.887754 AGACAATATGGTTGGTGGTTAACT 58.112 37.500 5.42 0.00 0.00 2.24
2462 2543 8.698210 TGTAACTGGACTAAGAGACTTTGTTAA 58.302 33.333 0.00 0.00 0.00 2.01
2467 2548 7.959175 TGGACTAAGAGACTTTGTTAAGCTTA 58.041 34.615 0.86 0.86 34.60 3.09
2468 2549 8.594550 TGGACTAAGAGACTTTGTTAAGCTTAT 58.405 33.333 7.08 0.00 34.60 1.73
2469 2550 9.089601 GGACTAAGAGACTTTGTTAAGCTTATC 57.910 37.037 7.08 7.31 34.60 1.75
2595 2678 6.690194 AAAGCTATTCAGTTGACATGGATC 57.310 37.500 0.00 0.00 0.00 3.36
2601 2684 7.712639 GCTATTCAGTTGACATGGATCTTTCTA 59.287 37.037 0.00 0.00 0.00 2.10
2605 2688 9.551734 TTCAGTTGACATGGATCTTTCTATATG 57.448 33.333 0.00 0.00 0.00 1.78
2634 2717 1.460255 CCTGCCCCTTCTGGTTCAA 59.540 57.895 0.00 0.00 0.00 2.69
2691 2774 3.944015 GAGCATTGTGGCTAGATTCTTGT 59.056 43.478 0.00 0.00 45.99 3.16
2948 3034 4.647564 ATTTGAGGGCAGGGATATACAG 57.352 45.455 0.00 0.00 0.00 2.74
2971 3057 6.430925 CAGAACAAATTATCCTGACCTGTTGA 59.569 38.462 0.00 0.00 0.00 3.18
2972 3058 6.656693 AGAACAAATTATCCTGACCTGTTGAG 59.343 38.462 0.00 0.00 0.00 3.02
2974 3060 5.940470 ACAAATTATCCTGACCTGTTGAGTC 59.060 40.000 0.00 0.00 34.72 3.36
2975 3061 6.176183 CAAATTATCCTGACCTGTTGAGTCT 58.824 40.000 0.00 0.00 35.21 3.24
2977 3063 5.825593 TTATCCTGACCTGTTGAGTCTTT 57.174 39.130 0.00 0.00 35.21 2.52
2978 3064 3.475566 TCCTGACCTGTTGAGTCTTTG 57.524 47.619 0.00 0.00 35.21 2.77
3145 3273 0.035739 TAAGCCGTGTCTGGAAACCC 59.964 55.000 0.00 0.00 0.00 4.11
3279 3407 1.180029 GCATTGTCAGTTGAGCCCAT 58.820 50.000 0.00 0.00 0.00 4.00
3285 3413 0.252881 TCAGTTGAGCCCATCCCTCT 60.253 55.000 0.00 0.00 0.00 3.69
3298 3426 0.770499 TCCCTCTGACAAACATGCCA 59.230 50.000 0.00 0.00 0.00 4.92
3457 3585 3.964031 CCTCAAAGGTATCTAGTCCTGCT 59.036 47.826 5.08 0.00 33.97 4.24
3458 3586 4.407296 CCTCAAAGGTATCTAGTCCTGCTT 59.593 45.833 5.08 0.00 33.97 3.91
3459 3587 5.344743 TCAAAGGTATCTAGTCCTGCTTG 57.655 43.478 5.08 6.91 33.97 4.01
3485 3613 1.680522 CCCTGACCACCCAGAGATCG 61.681 65.000 0.00 0.00 36.29 3.69
3548 3676 8.260818 CAGTTTATCCTGAGATTCAAGAACCTA 58.739 37.037 0.00 0.00 34.23 3.08
3561 3689 6.312141 TCAAGAACCTAACCATGATGATCA 57.688 37.500 0.00 0.00 0.00 2.92
3565 3693 7.437713 AGAACCTAACCATGATGATCAGTTA 57.562 36.000 0.09 4.42 0.00 2.24
3612 3740 3.710209 ACCTGATCTCAAACCTGAAGG 57.290 47.619 0.00 0.00 42.17 3.46
3662 3790 3.253188 TGAAGAAAAACTTGATGAGCCGG 59.747 43.478 0.00 0.00 39.13 6.13
3772 3900 1.470051 GAGAAGAACCTCTCTCCGCT 58.530 55.000 0.00 0.00 39.08 5.52
4164 4292 5.882557 ACTGTTTGATGACTTGTCAGACTTT 59.117 36.000 9.39 0.00 33.32 2.66
4165 4293 6.037610 ACTGTTTGATGACTTGTCAGACTTTC 59.962 38.462 9.39 2.63 33.32 2.62
4166 4294 6.115446 TGTTTGATGACTTGTCAGACTTTCT 58.885 36.000 9.39 0.00 33.32 2.52
4167 4295 6.599244 TGTTTGATGACTTGTCAGACTTTCTT 59.401 34.615 9.39 0.00 33.32 2.52
4168 4296 7.768582 TGTTTGATGACTTGTCAGACTTTCTTA 59.231 33.333 9.39 0.00 33.32 2.10
4169 4297 7.715265 TTGATGACTTGTCAGACTTTCTTAC 57.285 36.000 9.39 0.00 0.00 2.34
4170 4298 6.223852 TGATGACTTGTCAGACTTTCTTACC 58.776 40.000 9.39 0.00 0.00 2.85
4171 4299 5.871396 TGACTTGTCAGACTTTCTTACCT 57.129 39.130 1.31 0.00 0.00 3.08
4172 4300 6.971726 TGACTTGTCAGACTTTCTTACCTA 57.028 37.500 1.31 0.00 0.00 3.08
4173 4301 6.746120 TGACTTGTCAGACTTTCTTACCTAC 58.254 40.000 1.31 0.00 0.00 3.18
4174 4302 6.550108 TGACTTGTCAGACTTTCTTACCTACT 59.450 38.462 1.31 0.00 0.00 2.57
4175 4303 7.069578 TGACTTGTCAGACTTTCTTACCTACTT 59.930 37.037 1.31 0.00 0.00 2.24
4176 4304 7.435305 ACTTGTCAGACTTTCTTACCTACTTC 58.565 38.462 1.31 0.00 0.00 3.01
4177 4305 6.971726 TGTCAGACTTTCTTACCTACTTCA 57.028 37.500 1.31 0.00 0.00 3.02
4178 4306 7.356089 TGTCAGACTTTCTTACCTACTTCAA 57.644 36.000 1.31 0.00 0.00 2.69
4179 4307 7.788026 TGTCAGACTTTCTTACCTACTTCAAA 58.212 34.615 1.31 0.00 0.00 2.69
4180 4308 7.926555 TGTCAGACTTTCTTACCTACTTCAAAG 59.073 37.037 1.31 0.00 0.00 2.77
4181 4309 7.927092 GTCAGACTTTCTTACCTACTTCAAAGT 59.073 37.037 0.46 0.46 42.91 2.66
4182 4310 9.139734 TCAGACTTTCTTACCTACTTCAAAGTA 57.860 33.333 2.82 2.82 40.37 2.24
4183 4311 9.760077 CAGACTTTCTTACCTACTTCAAAGTAA 57.240 33.333 4.32 0.00 40.70 2.24
4184 4312 9.761504 AGACTTTCTTACCTACTTCAAAGTAAC 57.238 33.333 4.32 0.00 40.70 2.50
4185 4313 8.899427 ACTTTCTTACCTACTTCAAAGTAACC 57.101 34.615 4.32 0.00 40.70 2.85
4186 4314 8.488668 ACTTTCTTACCTACTTCAAAGTAACCA 58.511 33.333 4.32 0.00 40.70 3.67
4187 4315 9.503399 CTTTCTTACCTACTTCAAAGTAACCAT 57.497 33.333 4.32 0.00 40.70 3.55
4188 4316 8.842358 TTCTTACCTACTTCAAAGTAACCATG 57.158 34.615 4.32 0.00 40.70 3.66
4189 4317 7.970102 TCTTACCTACTTCAAAGTAACCATGT 58.030 34.615 4.32 1.02 40.70 3.21
4190 4318 9.092338 TCTTACCTACTTCAAAGTAACCATGTA 57.908 33.333 4.32 0.28 40.70 2.29
4191 4319 9.148104 CTTACCTACTTCAAAGTAACCATGTAC 57.852 37.037 4.32 0.00 40.70 2.90
4192 4320 7.069877 ACCTACTTCAAAGTAACCATGTACA 57.930 36.000 0.00 0.00 40.70 2.90
4193 4321 6.932960 ACCTACTTCAAAGTAACCATGTACAC 59.067 38.462 0.00 0.00 40.70 2.90
4194 4322 6.932400 CCTACTTCAAAGTAACCATGTACACA 59.068 38.462 0.00 0.00 40.70 3.72
4195 4323 7.606456 CCTACTTCAAAGTAACCATGTACACAT 59.394 37.037 0.00 0.00 40.70 3.21
4196 4324 9.647797 CTACTTCAAAGTAACCATGTACACATA 57.352 33.333 0.00 0.00 40.70 2.29
4197 4325 8.547967 ACTTCAAAGTAACCATGTACACATAG 57.452 34.615 0.00 0.00 37.52 2.23
4198 4326 8.154856 ACTTCAAAGTAACCATGTACACATAGT 58.845 33.333 0.00 0.00 37.52 2.12
4199 4327 9.647797 CTTCAAAGTAACCATGTACACATAGTA 57.352 33.333 0.00 0.00 34.26 1.82
4201 4329 9.594478 TCAAAGTAACCATGTACACATAGTATG 57.406 33.333 8.66 8.66 34.67 2.39
4202 4330 9.378551 CAAAGTAACCATGTACACATAGTATGT 57.621 33.333 10.10 10.10 46.22 2.29
4203 4331 9.953565 AAAGTAACCATGTACACATAGTATGTT 57.046 29.630 13.25 7.87 42.70 2.71
4204 4332 9.953565 AAGTAACCATGTACACATAGTATGTTT 57.046 29.630 13.25 9.95 42.70 2.83
4205 4333 9.953565 AGTAACCATGTACACATAGTATGTTTT 57.046 29.630 13.25 6.26 42.70 2.43
4208 4336 7.535139 ACCATGTACACATAGTATGTTTTTGC 58.465 34.615 13.25 5.46 42.70 3.68
4209 4337 6.972328 CCATGTACACATAGTATGTTTTTGCC 59.028 38.462 13.25 0.22 42.70 4.52
4210 4338 7.148086 CCATGTACACATAGTATGTTTTTGCCT 60.148 37.037 13.25 0.00 42.70 4.75
4211 4339 8.888716 CATGTACACATAGTATGTTTTTGCCTA 58.111 33.333 13.25 0.00 42.70 3.93
4212 4340 8.259049 TGTACACATAGTATGTTTTTGCCTAC 57.741 34.615 13.25 2.52 42.70 3.18
4213 4341 8.098286 TGTACACATAGTATGTTTTTGCCTACT 58.902 33.333 13.25 0.00 42.70 2.57
4214 4342 7.996098 ACACATAGTATGTTTTTGCCTACTT 57.004 32.000 13.25 0.00 42.70 2.24
4215 4343 8.040716 ACACATAGTATGTTTTTGCCTACTTC 57.959 34.615 13.25 0.00 42.70 3.01
4216 4344 7.663905 ACACATAGTATGTTTTTGCCTACTTCA 59.336 33.333 13.25 0.00 42.70 3.02
4217 4345 8.511321 CACATAGTATGTTTTTGCCTACTTCAA 58.489 33.333 13.25 0.00 42.70 2.69
4218 4346 9.073475 ACATAGTATGTTTTTGCCTACTTCAAA 57.927 29.630 10.10 0.00 41.63 2.69
4219 4347 9.559958 CATAGTATGTTTTTGCCTACTTCAAAG 57.440 33.333 1.65 0.00 35.21 2.77
4220 4348 7.582667 AGTATGTTTTTGCCTACTTCAAAGT 57.417 32.000 0.46 0.46 42.91 2.66
4221 4349 8.685838 AGTATGTTTTTGCCTACTTCAAAGTA 57.314 30.769 2.82 2.82 40.37 2.24
4222 4350 9.127277 AGTATGTTTTTGCCTACTTCAAAGTAA 57.873 29.630 4.32 0.00 40.70 2.24
4223 4351 9.177304 GTATGTTTTTGCCTACTTCAAAGTAAC 57.823 33.333 4.32 1.07 40.70 2.50
4224 4352 7.399245 TGTTTTTGCCTACTTCAAAGTAACT 57.601 32.000 4.32 0.00 40.70 2.24
4225 4353 7.832769 TGTTTTTGCCTACTTCAAAGTAACTT 58.167 30.769 4.32 0.00 40.70 2.66
4226 4354 8.308207 TGTTTTTGCCTACTTCAAAGTAACTTT 58.692 29.630 4.32 0.00 40.70 2.66
4227 4355 9.146984 GTTTTTGCCTACTTCAAAGTAACTTTT 57.853 29.630 4.32 0.00 40.70 2.27
4228 4356 8.696410 TTTTGCCTACTTCAAAGTAACTTTTG 57.304 30.769 4.32 0.00 40.70 2.44
4229 4357 7.399245 TTGCCTACTTCAAAGTAACTTTTGT 57.601 32.000 4.32 3.78 40.70 2.83
4230 4358 8.508883 TTGCCTACTTCAAAGTAACTTTTGTA 57.491 30.769 4.32 4.53 40.70 2.41
4231 4359 8.508883 TGCCTACTTCAAAGTAACTTTTGTAA 57.491 30.769 4.32 0.00 40.70 2.41
4232 4360 9.127277 TGCCTACTTCAAAGTAACTTTTGTAAT 57.873 29.630 4.32 0.00 40.70 1.89
4233 4361 9.961265 GCCTACTTCAAAGTAACTTTTGTAATT 57.039 29.630 4.32 0.00 40.70 1.40
4257 4385 7.859325 TGATAATTAGGTTGTTGGTAGAAGC 57.141 36.000 0.00 0.00 0.00 3.86
4258 4386 6.826741 TGATAATTAGGTTGTTGGTAGAAGCC 59.173 38.462 0.00 0.00 0.00 4.35
4259 4387 4.650972 ATTAGGTTGTTGGTAGAAGCCA 57.349 40.909 0.00 0.00 36.62 4.75
4260 4388 4.440826 TTAGGTTGTTGGTAGAAGCCAA 57.559 40.909 0.00 0.00 45.37 4.52
4290 4418 9.563898 TTGTTATATACATCATATTCCGTCGTC 57.436 33.333 0.00 0.00 36.44 4.20
4291 4419 8.953313 TGTTATATACATCATATTCCGTCGTCT 58.047 33.333 0.00 0.00 31.96 4.18
4292 4420 9.784680 GTTATATACATCATATTCCGTCGTCTT 57.215 33.333 0.00 0.00 31.96 3.01
4294 4422 8.689251 ATATACATCATATTCCGTCGTCTTTG 57.311 34.615 0.00 0.00 0.00 2.77
4295 4423 4.755411 ACATCATATTCCGTCGTCTTTGT 58.245 39.130 0.00 0.00 0.00 2.83
4296 4424 5.175859 ACATCATATTCCGTCGTCTTTGTT 58.824 37.500 0.00 0.00 0.00 2.83
4297 4425 5.642063 ACATCATATTCCGTCGTCTTTGTTT 59.358 36.000 0.00 0.00 0.00 2.83
4298 4426 6.814644 ACATCATATTCCGTCGTCTTTGTTTA 59.185 34.615 0.00 0.00 0.00 2.01
4299 4427 6.636666 TCATATTCCGTCGTCTTTGTTTAC 57.363 37.500 0.00 0.00 0.00 2.01
4300 4428 6.157904 TCATATTCCGTCGTCTTTGTTTACA 58.842 36.000 0.00 0.00 0.00 2.41
4301 4429 6.814644 TCATATTCCGTCGTCTTTGTTTACAT 59.185 34.615 0.00 0.00 0.00 2.29
4302 4430 5.934935 ATTCCGTCGTCTTTGTTTACATT 57.065 34.783 0.00 0.00 0.00 2.71
4303 4431 8.597227 CATATTCCGTCGTCTTTGTTTACATTA 58.403 33.333 0.00 0.00 0.00 1.90
4304 4432 6.456447 TTCCGTCGTCTTTGTTTACATTAG 57.544 37.500 0.00 0.00 0.00 1.73
4305 4433 5.531634 TCCGTCGTCTTTGTTTACATTAGT 58.468 37.500 0.00 0.00 0.00 2.24
4306 4434 6.676950 TCCGTCGTCTTTGTTTACATTAGTA 58.323 36.000 0.00 0.00 0.00 1.82
4307 4435 7.144661 TCCGTCGTCTTTGTTTACATTAGTAA 58.855 34.615 0.00 0.00 38.40 2.24
4308 4436 7.326789 TCCGTCGTCTTTGTTTACATTAGTAAG 59.673 37.037 0.00 0.00 41.00 2.34
4309 4437 7.326789 CCGTCGTCTTTGTTTACATTAGTAAGA 59.673 37.037 0.00 0.00 41.00 2.10
4310 4438 8.152159 CGTCGTCTTTGTTTACATTAGTAAGAC 58.848 37.037 11.60 11.60 41.00 3.01
4311 4439 9.189723 GTCGTCTTTGTTTACATTAGTAAGACT 57.810 33.333 16.31 0.00 41.00 3.24
4312 4440 9.188588 TCGTCTTTGTTTACATTAGTAAGACTG 57.811 33.333 16.31 12.10 41.00 3.51
4313 4441 8.975439 CGTCTTTGTTTACATTAGTAAGACTGT 58.025 33.333 16.31 0.00 41.00 3.55
4324 4452 8.993121 ACATTAGTAAGACTGTTTGATGACTTG 58.007 33.333 0.00 0.00 0.00 3.16
4325 4453 8.993121 CATTAGTAAGACTGTTTGATGACTTGT 58.007 33.333 0.00 0.00 0.00 3.16
4326 4454 8.589335 TTAGTAAGACTGTTTGATGACTTGTC 57.411 34.615 0.00 0.00 0.00 3.18
4327 4455 6.582636 AGTAAGACTGTTTGATGACTTGTCA 58.417 36.000 5.89 5.89 0.00 3.58
4328 4456 5.998454 AAGACTGTTTGATGACTTGTCAG 57.002 39.130 9.39 0.00 0.00 3.51
4329 4457 5.282055 AGACTGTTTGATGACTTGTCAGA 57.718 39.130 9.39 0.00 0.00 3.27
4330 4458 5.053145 AGACTGTTTGATGACTTGTCAGAC 58.947 41.667 9.39 0.00 32.91 3.51
4331 4459 5.028549 ACTGTTTGATGACTTGTCAGACT 57.971 39.130 9.39 0.00 33.32 3.24
4332 4460 5.431765 ACTGTTTGATGACTTGTCAGACTT 58.568 37.500 9.39 0.00 33.32 3.01
4490 4623 0.190815 AAAGTGTTCCAGGCCCCAAT 59.809 50.000 0.00 0.00 0.00 3.16
4496 4629 2.225496 TGTTCCAGGCCCCAATTGTATT 60.225 45.455 0.00 0.00 0.00 1.89
4617 4750 4.036518 ACTGAGCTGTTCCCTAAGATCAT 58.963 43.478 0.00 0.00 38.10 2.45
4619 4752 5.028549 TGAGCTGTTCCCTAAGATCATTC 57.971 43.478 0.00 0.00 34.10 2.67
4633 4766 1.226211 CATTCGGAGCTTGCTTGCG 60.226 57.895 0.00 0.00 38.13 4.85
4658 4791 3.282021 ACACACTGGCATCCATGAATAC 58.718 45.455 0.00 0.00 30.82 1.89
4663 4796 4.456911 CACTGGCATCCATGAATACCATAC 59.543 45.833 0.00 0.00 33.31 2.39
4742 4883 1.777101 TTGTGCTGCATTTAAACGGC 58.223 45.000 5.27 6.72 38.70 5.68
4768 4918 4.191544 TGCTACAGATAGTTGGATTGTGC 58.808 43.478 0.00 0.00 0.00 4.57
4775 4925 6.484643 ACAGATAGTTGGATTGTGCATCATAC 59.515 38.462 0.00 0.00 32.79 2.39
4865 5015 1.080705 GAGACGGTGAAGACGTGGG 60.081 63.158 0.00 0.00 45.68 4.61
5016 5166 1.933247 AATTTGTTGTGGTGTTGCCG 58.067 45.000 0.00 0.00 41.21 5.69
5022 5172 2.203153 GTGGTGTTGCCGACCTGT 60.203 61.111 0.00 0.00 41.21 4.00
5064 5214 0.322322 ATAGGGTTTTGCGACGGTCA 59.678 50.000 9.10 0.00 0.00 4.02
5104 5254 6.423905 TGTGTCTTGTATAGCTGAAGTTTGTC 59.576 38.462 0.00 0.00 0.00 3.18
5203 5375 0.881796 GCAAGTACCTGGGCTGTTTC 59.118 55.000 0.00 0.00 0.00 2.78
5204 5376 1.545651 GCAAGTACCTGGGCTGTTTCT 60.546 52.381 0.00 0.00 0.00 2.52
5206 5378 2.554032 CAAGTACCTGGGCTGTTTCTTG 59.446 50.000 0.00 0.00 0.00 3.02
5208 5380 1.145571 TACCTGGGCTGTTTCTTGGT 58.854 50.000 0.00 0.00 0.00 3.67
5210 5382 0.675633 CCTGGGCTGTTTCTTGGTTG 59.324 55.000 0.00 0.00 0.00 3.77
5211 5383 0.675633 CTGGGCTGTTTCTTGGTTGG 59.324 55.000 0.00 0.00 0.00 3.77
5330 5503 7.335422 GTCAGTGATGATTTCCTTGTCATAGTT 59.665 37.037 0.00 0.00 35.33 2.24
5331 5504 7.335171 TCAGTGATGATTTCCTTGTCATAGTTG 59.665 37.037 0.00 0.00 35.33 3.16
5332 5505 7.120285 CAGTGATGATTTCCTTGTCATAGTTGT 59.880 37.037 0.00 0.00 35.33 3.32
5333 5506 7.120285 AGTGATGATTTCCTTGTCATAGTTGTG 59.880 37.037 0.00 0.00 35.33 3.33
5334 5507 7.119699 GTGATGATTTCCTTGTCATAGTTGTGA 59.880 37.037 0.00 0.00 35.33 3.58
5335 5508 7.335171 TGATGATTTCCTTGTCATAGTTGTGAG 59.665 37.037 0.00 0.00 35.33 3.51
5336 5509 6.533730 TGATTTCCTTGTCATAGTTGTGAGT 58.466 36.000 0.00 0.00 0.00 3.41
5337 5510 6.427853 TGATTTCCTTGTCATAGTTGTGAGTG 59.572 38.462 0.00 0.00 0.00 3.51
5338 5511 4.955811 TCCTTGTCATAGTTGTGAGTGT 57.044 40.909 0.00 0.00 0.00 3.55
5339 5512 4.631131 TCCTTGTCATAGTTGTGAGTGTG 58.369 43.478 0.00 0.00 0.00 3.82
5340 5513 4.343814 TCCTTGTCATAGTTGTGAGTGTGA 59.656 41.667 0.00 0.00 0.00 3.58
5341 5514 5.012046 TCCTTGTCATAGTTGTGAGTGTGAT 59.988 40.000 0.00 0.00 30.42 3.06
5342 5515 5.121298 CCTTGTCATAGTTGTGAGTGTGATG 59.879 44.000 0.00 0.00 30.42 3.07
5343 5516 5.213891 TGTCATAGTTGTGAGTGTGATGT 57.786 39.130 0.00 0.00 30.42 3.06
5344 5517 5.610398 TGTCATAGTTGTGAGTGTGATGTT 58.390 37.500 0.00 0.00 30.42 2.71
5345 5518 5.466393 TGTCATAGTTGTGAGTGTGATGTTG 59.534 40.000 0.00 0.00 30.42 3.33
5346 5519 4.452114 TCATAGTTGTGAGTGTGATGTTGC 59.548 41.667 0.00 0.00 0.00 4.17
5347 5520 1.949525 AGTTGTGAGTGTGATGTTGCC 59.050 47.619 0.00 0.00 0.00 4.52
5348 5521 1.949525 GTTGTGAGTGTGATGTTGCCT 59.050 47.619 0.00 0.00 0.00 4.75
5349 5522 1.882912 TGTGAGTGTGATGTTGCCTC 58.117 50.000 0.00 0.00 0.00 4.70
5350 5523 1.417517 TGTGAGTGTGATGTTGCCTCT 59.582 47.619 0.00 0.00 0.00 3.69
5351 5524 1.802960 GTGAGTGTGATGTTGCCTCTG 59.197 52.381 0.00 0.00 0.00 3.35
5352 5525 1.271001 TGAGTGTGATGTTGCCTCTGG 60.271 52.381 0.00 0.00 0.00 3.86
5353 5526 1.002430 GAGTGTGATGTTGCCTCTGGA 59.998 52.381 0.00 0.00 0.00 3.86
5354 5527 1.421268 AGTGTGATGTTGCCTCTGGAA 59.579 47.619 0.00 0.00 0.00 3.53
5355 5528 2.040813 AGTGTGATGTTGCCTCTGGAAT 59.959 45.455 0.00 0.00 0.00 3.01
5385 5578 5.129634 TCCTTGTCATTCTGTTAGCAAACA 58.870 37.500 0.00 0.00 43.32 2.83
5393 5586 8.816144 GTCATTCTGTTAGCAAACATTTTTGAA 58.184 29.630 8.51 0.00 44.43 2.69
5396 5589 6.279882 TCTGTTAGCAAACATTTTTGAAGGG 58.720 36.000 8.51 0.00 44.43 3.95
5408 5601 2.024176 TTGAAGGGGAGCAGAGTGTA 57.976 50.000 0.00 0.00 0.00 2.90
5431 5626 3.391227 GCTTCGTTAGCCTGAACATTC 57.609 47.619 1.58 0.00 44.48 2.67
5435 5630 5.121768 GCTTCGTTAGCCTGAACATTCTTTA 59.878 40.000 1.58 0.00 44.48 1.85
5442 5637 3.736126 GCCTGAACATTCTTTATGCAGCC 60.736 47.826 0.00 0.00 37.81 4.85
5452 5647 3.652869 TCTTTATGCAGCCTAGCCCTATT 59.347 43.478 0.00 0.00 0.00 1.73
5471 5666 6.129393 CCTATTTATGATGCGTGTTTTCTCG 58.871 40.000 0.00 0.00 39.40 4.04
5472 5667 4.335082 TTTATGATGCGTGTTTTCTCGG 57.665 40.909 0.00 0.00 37.30 4.63
5473 5668 1.808411 ATGATGCGTGTTTTCTCGGT 58.192 45.000 0.00 0.00 37.30 4.69
5508 5704 2.132740 GTGAAGCAAAAATCACCGCA 57.867 45.000 0.00 0.00 40.00 5.69
5515 5711 4.048504 AGCAAAAATCACCGCAGTAAAAC 58.951 39.130 0.00 0.00 0.00 2.43
5516 5712 3.799420 GCAAAAATCACCGCAGTAAAACA 59.201 39.130 0.00 0.00 0.00 2.83
5518 5714 5.050431 GCAAAAATCACCGCAGTAAAACAAT 60.050 36.000 0.00 0.00 0.00 2.71
5521 5717 3.134574 TCACCGCAGTAAAACAATCCT 57.865 42.857 0.00 0.00 0.00 3.24
5534 5730 8.329502 AGTAAAACAATCCTAGTTTAGCTGGAT 58.670 33.333 0.00 0.00 38.17 3.41
5535 5731 7.396540 AAAACAATCCTAGTTTAGCTGGATG 57.603 36.000 0.00 0.00 38.17 3.51
5536 5732 5.700402 ACAATCCTAGTTTAGCTGGATGT 57.300 39.130 0.00 0.00 36.19 3.06
5537 5733 6.808321 ACAATCCTAGTTTAGCTGGATGTA 57.192 37.500 0.00 0.00 36.19 2.29
5538 5734 7.195374 ACAATCCTAGTTTAGCTGGATGTAA 57.805 36.000 0.00 0.00 36.19 2.41
5539 5735 7.630082 ACAATCCTAGTTTAGCTGGATGTAAA 58.370 34.615 0.00 0.00 36.19 2.01
5540 5736 8.275040 ACAATCCTAGTTTAGCTGGATGTAAAT 58.725 33.333 0.00 0.00 36.19 1.40
5541 5737 8.778358 CAATCCTAGTTTAGCTGGATGTAAATC 58.222 37.037 0.00 0.00 36.19 2.17
5542 5738 6.513180 TCCTAGTTTAGCTGGATGTAAATCG 58.487 40.000 0.00 0.00 0.00 3.34
5543 5739 6.322969 TCCTAGTTTAGCTGGATGTAAATCGA 59.677 38.462 0.00 0.00 0.00 3.59
5544 5740 6.984474 CCTAGTTTAGCTGGATGTAAATCGAA 59.016 38.462 0.00 0.00 0.00 3.71
5545 5741 6.663944 AGTTTAGCTGGATGTAAATCGAAC 57.336 37.500 0.00 0.00 0.00 3.95
5546 5742 6.407202 AGTTTAGCTGGATGTAAATCGAACT 58.593 36.000 0.00 0.00 0.00 3.01
5547 5743 6.313905 AGTTTAGCTGGATGTAAATCGAACTG 59.686 38.462 0.00 0.00 0.00 3.16
5548 5744 4.471904 AGCTGGATGTAAATCGAACTGA 57.528 40.909 0.00 0.00 0.00 3.41
5549 5745 4.437239 AGCTGGATGTAAATCGAACTGAG 58.563 43.478 0.00 0.00 0.00 3.35
5550 5746 4.160439 AGCTGGATGTAAATCGAACTGAGA 59.840 41.667 0.00 0.00 0.00 3.27
5551 5747 4.505922 GCTGGATGTAAATCGAACTGAGAG 59.494 45.833 0.00 0.00 0.00 3.20
5552 5748 5.655488 CTGGATGTAAATCGAACTGAGAGT 58.345 41.667 0.00 0.00 0.00 3.24
5553 5749 5.410924 TGGATGTAAATCGAACTGAGAGTG 58.589 41.667 0.00 0.00 0.00 3.51
5554 5750 4.268884 GGATGTAAATCGAACTGAGAGTGC 59.731 45.833 0.00 0.00 0.00 4.40
5555 5751 3.585862 TGTAAATCGAACTGAGAGTGCC 58.414 45.455 0.00 0.00 0.00 5.01
5556 5752 1.714794 AAATCGAACTGAGAGTGCCG 58.285 50.000 0.00 0.00 0.00 5.69
5557 5753 0.603569 AATCGAACTGAGAGTGCCGT 59.396 50.000 0.00 0.00 0.00 5.68
5558 5754 0.603569 ATCGAACTGAGAGTGCCGTT 59.396 50.000 0.00 0.00 0.00 4.44
5559 5755 0.387929 TCGAACTGAGAGTGCCGTTT 59.612 50.000 0.00 0.00 0.00 3.60
5560 5756 1.202486 TCGAACTGAGAGTGCCGTTTT 60.202 47.619 0.00 0.00 0.00 2.43
5561 5757 1.070577 CGAACTGAGAGTGCCGTTTTG 60.071 52.381 0.00 0.00 0.00 2.44
5562 5758 1.264288 GAACTGAGAGTGCCGTTTTGG 59.736 52.381 0.00 0.00 42.50 3.28
5572 5768 2.793831 CCGTTTTGGCTATGGGGAG 58.206 57.895 0.00 0.00 0.00 4.30
5573 5769 1.384222 CCGTTTTGGCTATGGGGAGC 61.384 60.000 0.00 0.00 42.05 4.70
5574 5770 0.679640 CGTTTTGGCTATGGGGAGCA 60.680 55.000 0.00 0.00 44.76 4.26
5575 5771 1.780503 GTTTTGGCTATGGGGAGCAT 58.219 50.000 0.00 0.00 44.76 3.79
5576 5772 2.748132 CGTTTTGGCTATGGGGAGCATA 60.748 50.000 0.00 0.00 44.76 3.14
5577 5773 3.500343 GTTTTGGCTATGGGGAGCATAT 58.500 45.455 0.00 0.00 44.76 1.78
5578 5774 2.885135 TTGGCTATGGGGAGCATATG 57.115 50.000 0.00 0.00 44.76 1.78
5579 5775 0.329261 TGGCTATGGGGAGCATATGC 59.671 55.000 20.36 20.36 44.76 3.14
5593 5789 4.156664 GCATATGCTCATGGATGAACAC 57.843 45.455 20.64 0.00 35.92 3.32
5594 5790 3.819337 GCATATGCTCATGGATGAACACT 59.181 43.478 20.64 0.00 35.92 3.55
5595 5791 4.999311 GCATATGCTCATGGATGAACACTA 59.001 41.667 20.64 0.00 35.92 2.74
5596 5792 5.471116 GCATATGCTCATGGATGAACACTAA 59.529 40.000 20.64 0.00 35.92 2.24
5597 5793 6.016860 GCATATGCTCATGGATGAACACTAAA 60.017 38.462 20.64 0.00 35.92 1.85
5598 5794 7.309012 GCATATGCTCATGGATGAACACTAAAT 60.309 37.037 20.64 0.00 35.92 1.40
5599 5795 8.573885 CATATGCTCATGGATGAACACTAAATT 58.426 33.333 0.00 0.00 35.92 1.82
5600 5796 9.797642 ATATGCTCATGGATGAACACTAAATTA 57.202 29.630 0.00 0.00 35.92 1.40
5601 5797 7.936496 TGCTCATGGATGAACACTAAATTAA 57.064 32.000 0.00 0.00 36.18 1.40
5602 5798 8.347004 TGCTCATGGATGAACACTAAATTAAA 57.653 30.769 0.00 0.00 36.18 1.52
5603 5799 8.801299 TGCTCATGGATGAACACTAAATTAAAA 58.199 29.630 0.00 0.00 36.18 1.52
5604 5800 9.638239 GCTCATGGATGAACACTAAATTAAAAA 57.362 29.630 0.00 0.00 36.18 1.94
5661 5857 6.707440 TTTTGTGTGGATGTTCATGTTAGT 57.293 33.333 0.00 0.00 0.00 2.24
5662 5858 5.940192 TTGTGTGGATGTTCATGTTAGTC 57.060 39.130 0.00 0.00 0.00 2.59
5663 5859 5.227569 TGTGTGGATGTTCATGTTAGTCT 57.772 39.130 0.00 0.00 0.00 3.24
5664 5860 6.353404 TGTGTGGATGTTCATGTTAGTCTA 57.647 37.500 0.00 0.00 0.00 2.59
5665 5861 6.764379 TGTGTGGATGTTCATGTTAGTCTAA 58.236 36.000 0.00 0.00 0.00 2.10
5666 5862 6.649141 TGTGTGGATGTTCATGTTAGTCTAAC 59.351 38.462 14.76 14.76 39.11 2.34
5691 5887 7.878477 AAGTGTGCTTGATAATTTTCATGTG 57.122 32.000 11.56 3.11 32.92 3.21
5692 5888 7.218228 AGTGTGCTTGATAATTTTCATGTGA 57.782 32.000 11.56 0.21 0.00 3.58
5693 5889 7.660112 AGTGTGCTTGATAATTTTCATGTGAA 58.340 30.769 11.56 0.00 0.00 3.18
5694 5890 8.143193 AGTGTGCTTGATAATTTTCATGTGAAA 58.857 29.630 4.16 4.16 41.77 2.69
5695 5891 8.216453 GTGTGCTTGATAATTTTCATGTGAAAC 58.784 33.333 7.63 0.00 43.01 2.78
5696 5892 7.114670 TGTGCTTGATAATTTTCATGTGAAACG 59.885 33.333 7.63 0.00 43.01 3.60
5697 5893 6.585702 TGCTTGATAATTTTCATGTGAAACGG 59.414 34.615 7.63 0.00 43.01 4.44
5698 5894 6.034898 GCTTGATAATTTTCATGTGAAACGGG 59.965 38.462 7.63 0.00 43.01 5.28
5699 5895 6.825944 TGATAATTTTCATGTGAAACGGGA 57.174 33.333 7.63 0.00 43.01 5.14
5700 5896 7.403312 TGATAATTTTCATGTGAAACGGGAT 57.597 32.000 7.63 0.00 43.01 3.85
5701 5897 8.512966 TGATAATTTTCATGTGAAACGGGATA 57.487 30.769 7.63 0.00 43.01 2.59
5702 5898 8.620416 TGATAATTTTCATGTGAAACGGGATAG 58.380 33.333 7.63 0.00 43.01 2.08
5703 5899 4.695217 TTTTCATGTGAAACGGGATAGC 57.305 40.909 7.63 0.00 43.01 2.97
5704 5900 3.342377 TTCATGTGAAACGGGATAGCA 57.658 42.857 0.00 0.00 42.39 3.49
5705 5901 2.905075 TCATGTGAAACGGGATAGCAG 58.095 47.619 0.00 0.00 42.39 4.24
5706 5902 2.236146 TCATGTGAAACGGGATAGCAGT 59.764 45.455 0.00 0.00 42.39 4.40
5707 5903 2.093306 TGTGAAACGGGATAGCAGTG 57.907 50.000 0.00 0.00 42.39 3.66
5708 5904 0.727398 GTGAAACGGGATAGCAGTGC 59.273 55.000 7.13 7.13 0.00 4.40
5709 5905 0.613260 TGAAACGGGATAGCAGTGCT 59.387 50.000 23.44 23.44 43.41 4.40
5710 5906 1.003118 TGAAACGGGATAGCAGTGCTT 59.997 47.619 25.23 11.25 40.44 3.91
5711 5907 2.084546 GAAACGGGATAGCAGTGCTTT 58.915 47.619 25.23 16.35 40.44 3.51
5712 5908 1.453155 AACGGGATAGCAGTGCTTTG 58.547 50.000 25.23 11.16 40.44 2.77
5713 5909 0.324943 ACGGGATAGCAGTGCTTTGT 59.675 50.000 25.23 10.07 40.44 2.83
5714 5910 1.271379 ACGGGATAGCAGTGCTTTGTT 60.271 47.619 25.23 6.10 40.44 2.83
5715 5911 1.131126 CGGGATAGCAGTGCTTTGTTG 59.869 52.381 25.23 7.45 40.44 3.33
5716 5912 1.474077 GGGATAGCAGTGCTTTGTTGG 59.526 52.381 25.23 0.00 40.44 3.77
5717 5913 2.162681 GGATAGCAGTGCTTTGTTGGT 58.837 47.619 25.23 0.00 40.44 3.67
5718 5914 2.095059 GGATAGCAGTGCTTTGTTGGTG 60.095 50.000 25.23 0.00 40.44 4.17
5719 5915 2.340210 TAGCAGTGCTTTGTTGGTGA 57.660 45.000 25.23 0.00 40.44 4.02
5720 5916 1.473258 AGCAGTGCTTTGTTGGTGAA 58.527 45.000 13.14 0.00 33.89 3.18
5721 5917 1.824230 AGCAGTGCTTTGTTGGTGAAA 59.176 42.857 13.14 0.00 33.89 2.69
5722 5918 2.233431 AGCAGTGCTTTGTTGGTGAAAA 59.767 40.909 13.14 0.00 33.89 2.29
5723 5919 2.999355 GCAGTGCTTTGTTGGTGAAAAA 59.001 40.909 8.18 0.00 0.00 1.94
5782 5978 6.414408 TTTTGCAAGTAACATTTTGGTGTG 57.586 33.333 0.00 0.00 31.49 3.82
5783 5979 4.991153 TGCAAGTAACATTTTGGTGTGA 57.009 36.364 0.00 0.00 31.49 3.58
5784 5980 4.677584 TGCAAGTAACATTTTGGTGTGAC 58.322 39.130 0.00 0.00 34.26 3.67
5785 5981 4.158579 TGCAAGTAACATTTTGGTGTGACA 59.841 37.500 0.00 0.00 36.15 3.58
5786 5982 4.739716 GCAAGTAACATTTTGGTGTGACAG 59.260 41.667 0.00 0.00 36.15 3.51
5787 5983 5.678616 GCAAGTAACATTTTGGTGTGACAGT 60.679 40.000 0.00 0.00 36.15 3.55
5788 5984 5.499139 AGTAACATTTTGGTGTGACAGTG 57.501 39.130 0.00 0.00 36.15 3.66
5789 5985 5.189928 AGTAACATTTTGGTGTGACAGTGA 58.810 37.500 0.00 0.00 36.15 3.41
5790 5986 5.650266 AGTAACATTTTGGTGTGACAGTGAA 59.350 36.000 0.00 0.00 36.15 3.18
5791 5987 5.596836 AACATTTTGGTGTGACAGTGAAT 57.403 34.783 0.00 0.00 31.49 2.57
5792 5988 6.707440 AACATTTTGGTGTGACAGTGAATA 57.293 33.333 0.00 0.00 31.49 1.75
5793 5989 6.899393 ACATTTTGGTGTGACAGTGAATAT 57.101 33.333 0.00 0.00 0.00 1.28
5794 5990 7.994425 ACATTTTGGTGTGACAGTGAATATA 57.006 32.000 0.00 0.00 0.00 0.86
5795 5991 7.816640 ACATTTTGGTGTGACAGTGAATATAC 58.183 34.615 0.00 0.00 0.00 1.47
5796 5992 6.811253 TTTTGGTGTGACAGTGAATATACC 57.189 37.500 0.00 1.27 0.00 2.73
5797 5993 5.755409 TTGGTGTGACAGTGAATATACCT 57.245 39.130 0.00 0.00 0.00 3.08
5798 5994 6.860790 TTGGTGTGACAGTGAATATACCTA 57.139 37.500 0.00 0.00 0.00 3.08
5799 5995 7.432148 TTGGTGTGACAGTGAATATACCTAT 57.568 36.000 0.00 0.00 0.00 2.57
5800 5996 8.541899 TTGGTGTGACAGTGAATATACCTATA 57.458 34.615 0.00 0.00 0.00 1.31
5801 5997 8.721133 TGGTGTGACAGTGAATATACCTATAT 57.279 34.615 0.00 0.00 0.00 0.86
5802 5998 9.154632 TGGTGTGACAGTGAATATACCTATATT 57.845 33.333 0.00 0.00 40.53 1.28
5803 5999 9.998106 GGTGTGACAGTGAATATACCTATATTT 57.002 33.333 0.00 0.00 38.58 1.40
5844 6040 2.119886 TTTTTGGTGGGCAGAACCG 58.880 52.632 0.00 0.00 40.86 4.44
5845 6041 2.022240 TTTTTGGTGGGCAGAACCGC 62.022 55.000 0.00 0.00 40.86 5.68
5846 6042 3.723097 TTTGGTGGGCAGAACCGCA 62.723 57.895 0.00 0.00 42.82 5.69
5847 6043 4.641645 TGGTGGGCAGAACCGCAG 62.642 66.667 0.00 0.00 42.82 5.18
5848 6044 4.329545 GGTGGGCAGAACCGCAGA 62.330 66.667 0.00 0.00 42.82 4.26
5849 6045 2.281484 GTGGGCAGAACCGCAGAA 60.281 61.111 0.00 0.00 40.73 3.02
5850 6046 2.032528 TGGGCAGAACCGCAGAAG 59.967 61.111 0.00 0.00 40.62 2.85
5851 6047 3.435186 GGGCAGAACCGCAGAAGC 61.435 66.667 0.00 0.00 40.62 3.86
5852 6048 2.669569 GGCAGAACCGCAGAAGCA 60.670 61.111 0.00 0.00 42.27 3.91
5853 6049 2.042831 GGCAGAACCGCAGAAGCAT 61.043 57.895 0.00 0.00 42.27 3.79
5854 6050 0.744414 GGCAGAACCGCAGAAGCATA 60.744 55.000 0.00 0.00 42.27 3.14
5855 6051 1.303309 GCAGAACCGCAGAAGCATAT 58.697 50.000 0.00 0.00 42.27 1.78
5856 6052 2.483876 GCAGAACCGCAGAAGCATATA 58.516 47.619 0.00 0.00 42.27 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 4.564110 GGTGGGGCCGTGGCTATC 62.564 72.222 11.25 1.62 41.60 2.08
261 274 2.285069 ACATGTGGGGCTCCGGTA 60.285 61.111 0.00 0.00 35.24 4.02
262 275 3.717294 GACATGTGGGGCTCCGGT 61.717 66.667 1.15 0.00 35.24 5.28
264 277 1.820906 CATGACATGTGGGGCTCCG 60.821 63.158 1.15 0.00 35.24 4.63
286 299 0.478507 CCCCAACAGAACCACTCCTT 59.521 55.000 0.00 0.00 0.00 3.36
290 303 2.113139 CGCCCCAACAGAACCACT 59.887 61.111 0.00 0.00 0.00 4.00
333 346 1.615883 GCCAGTGAGTGAGAGTGAGAA 59.384 52.381 0.00 0.00 0.00 2.87
358 375 3.555168 GCGAGAGAAAAAGAAGGGAGTGA 60.555 47.826 0.00 0.00 0.00 3.41
360 377 2.368875 TGCGAGAGAAAAAGAAGGGAGT 59.631 45.455 0.00 0.00 0.00 3.85
362 379 3.703001 ATGCGAGAGAAAAAGAAGGGA 57.297 42.857 0.00 0.00 0.00 4.20
364 381 5.362556 TGAAATGCGAGAGAAAAAGAAGG 57.637 39.130 0.00 0.00 0.00 3.46
365 382 7.061557 GGAAATGAAATGCGAGAGAAAAAGAAG 59.938 37.037 0.00 0.00 0.00 2.85
366 383 6.863126 GGAAATGAAATGCGAGAGAAAAAGAA 59.137 34.615 0.00 0.00 0.00 2.52
368 385 5.574443 GGGAAATGAAATGCGAGAGAAAAAG 59.426 40.000 0.00 0.00 0.00 2.27
372 389 3.955471 AGGGAAATGAAATGCGAGAGAA 58.045 40.909 0.00 0.00 0.00 2.87
445 468 2.388735 CTCTGGCTGGATGGTAGTGTA 58.611 52.381 0.00 0.00 0.00 2.90
455 478 4.025858 GCACTGGCTCTGGCTGGA 62.026 66.667 0.00 0.00 38.73 3.86
464 495 2.856000 AGGAGTTGGGCACTGGCT 60.856 61.111 2.14 0.00 40.87 4.75
487 518 0.182299 CATTCCTTCCAGGGAGAGGC 59.818 60.000 0.00 0.00 35.59 4.70
497 528 0.106894 CCTACGCCTCCATTCCTTCC 59.893 60.000 0.00 0.00 0.00 3.46
498 529 1.069358 CTCCTACGCCTCCATTCCTTC 59.931 57.143 0.00 0.00 0.00 3.46
499 530 1.123928 CTCCTACGCCTCCATTCCTT 58.876 55.000 0.00 0.00 0.00 3.36
500 531 0.760945 CCTCCTACGCCTCCATTCCT 60.761 60.000 0.00 0.00 0.00 3.36
533 564 2.493973 CTCCCGCTCTCTGTCTGC 59.506 66.667 0.00 0.00 0.00 4.26
642 679 4.143333 GGTCGAAGCAGCGCCCTA 62.143 66.667 2.29 0.00 0.00 3.53
794 843 5.345741 CCACGGCAACTAATTTCAAAATGAG 59.654 40.000 0.00 0.00 33.76 2.90
795 844 5.221342 ACCACGGCAACTAATTTCAAAATGA 60.221 36.000 0.00 0.00 0.00 2.57
796 845 4.987912 ACCACGGCAACTAATTTCAAAATG 59.012 37.500 0.00 0.00 0.00 2.32
797 846 5.208463 ACCACGGCAACTAATTTCAAAAT 57.792 34.783 0.00 0.00 0.00 1.82
860 915 4.778143 GAACCCGCGGCATCCACT 62.778 66.667 22.85 0.00 0.00 4.00
880 935 4.886247 TTGTTACACAGAGAAAAACCGG 57.114 40.909 0.00 0.00 0.00 5.28
894 949 0.724549 CGCCGCAGCTAATTGTTACA 59.275 50.000 0.00 0.00 36.60 2.41
912 967 2.024729 TCAGCGCGCAGATCTACG 59.975 61.111 35.10 11.12 0.00 3.51
1125 1180 1.014352 CGCGGAATCCTCGGAAAAAT 58.986 50.000 3.37 0.00 0.00 1.82
1149 1204 3.123620 GCTCTCCAGTTGCAGGCG 61.124 66.667 0.00 0.00 0.00 5.52
1378 1444 3.405831 TCATGGTTCACTTCTTGCTGAG 58.594 45.455 0.00 0.00 0.00 3.35
1379 1445 3.490439 TCATGGTTCACTTCTTGCTGA 57.510 42.857 0.00 0.00 0.00 4.26
1457 1523 0.239347 CGGCTGCTTGTTCTTCCTTG 59.761 55.000 0.00 0.00 0.00 3.61
1672 1748 8.649973 AATAAGAACATTAACAACCGCAAAAA 57.350 26.923 0.00 0.00 0.00 1.94
1673 1749 9.745880 TTAATAAGAACATTAACAACCGCAAAA 57.254 25.926 0.00 0.00 0.00 2.44
1674 1750 9.400638 CTTAATAAGAACATTAACAACCGCAAA 57.599 29.630 0.00 0.00 0.00 3.68
1675 1751 7.539366 GCTTAATAAGAACATTAACAACCGCAA 59.461 33.333 3.88 0.00 0.00 4.85
1676 1752 7.024768 GCTTAATAAGAACATTAACAACCGCA 58.975 34.615 3.88 0.00 0.00 5.69
1677 1753 7.218204 CAGCTTAATAAGAACATTAACAACCGC 59.782 37.037 3.88 0.00 0.00 5.68
1678 1754 7.218204 GCAGCTTAATAAGAACATTAACAACCG 59.782 37.037 3.88 0.00 0.00 4.44
1679 1755 8.244113 AGCAGCTTAATAAGAACATTAACAACC 58.756 33.333 3.88 0.00 0.00 3.77
1682 1758 9.443323 TGTAGCAGCTTAATAAGAACATTAACA 57.557 29.630 0.00 0.00 0.00 2.41
1722 1798 6.697395 AGGAAAACAAACCAAATGGCTATAC 58.303 36.000 0.00 0.00 39.32 1.47
1723 1799 6.926630 AGGAAAACAAACCAAATGGCTATA 57.073 33.333 0.00 0.00 39.32 1.31
1779 1855 3.767630 AAAGCCCGACGTGCCTGTT 62.768 57.895 0.00 0.00 0.00 3.16
1780 1856 4.250305 AAAGCCCGACGTGCCTGT 62.250 61.111 0.00 0.00 0.00 4.00
1810 1886 2.484889 GCCTGAAGTCGTATGATTCCC 58.515 52.381 0.00 0.00 0.00 3.97
1882 1958 4.037803 TGGAACTTCACAATCAACCATGTG 59.962 41.667 0.00 0.00 46.44 3.21
1921 1997 6.030548 TCACTAGAAAGTCTGACATTCCTG 57.969 41.667 18.89 14.75 31.97 3.86
1924 2000 5.871524 TGCATCACTAGAAAGTCTGACATTC 59.128 40.000 15.80 15.80 31.97 2.67
1936 2012 7.692460 ACTGAATTGAATTGCATCACTAGAA 57.308 32.000 0.00 0.00 0.00 2.10
1999 2075 6.098982 CAGGTATTGGAGGAACTAGAATGAGT 59.901 42.308 0.00 0.00 41.55 3.41
2013 2089 9.091784 CGATGAACAATATATCAGGTATTGGAG 57.908 37.037 9.78 0.00 41.57 3.86
2123 2200 4.210746 CACATCTTGCATTCCTCGACATAG 59.789 45.833 0.00 0.00 0.00 2.23
2204 2281 2.853235 AAGTACAAAGCGGCCTTACT 57.147 45.000 0.00 0.00 0.00 2.24
2213 2290 6.603095 CCAATCTGTCAACTAAGTACAAAGC 58.397 40.000 0.00 0.00 0.00 3.51
2262 2339 7.492524 TGTATGCAAACAAGTTACAAAATCCA 58.507 30.769 0.00 0.00 0.00 3.41
2290 2367 7.581213 TTATTCCATGAGCCGAATTTAACAT 57.419 32.000 0.00 0.00 31.33 2.71
2301 2378 4.098349 TGAACAGCAATTATTCCATGAGCC 59.902 41.667 0.00 0.00 0.00 4.70
2366 2446 6.335471 TCACCGTCACTCAACTATAAAGAA 57.665 37.500 0.00 0.00 0.00 2.52
2482 2563 5.291971 AGAATTGTTTTTGTGCTGATCACC 58.708 37.500 0.00 0.00 45.03 4.02
2484 2565 6.395426 AGAGAATTGTTTTTGTGCTGATCA 57.605 33.333 0.00 0.00 0.00 2.92
2595 2678 9.034544 GGCAGGCATTTAAAAACATATAGAAAG 57.965 33.333 0.00 0.00 0.00 2.62
2601 2684 4.721274 AGGGGCAGGCATTTAAAAACATAT 59.279 37.500 0.00 0.00 0.00 1.78
2605 2688 3.007940 AGAAGGGGCAGGCATTTAAAAAC 59.992 43.478 0.00 0.00 0.00 2.43
2634 2717 9.959749 CACTGTAGTGTTATTGTTTGGTTAAAT 57.040 29.630 3.88 0.00 40.96 1.40
2658 2741 2.063266 CACAATGCTCACAATTGGCAC 58.937 47.619 10.83 0.00 38.83 5.01
2860 2944 2.188817 GAAGCTAACCTCTCCCTCCAA 58.811 52.381 0.00 0.00 0.00 3.53
2924 3008 6.505344 TCTGTATATCCCTGCCCTCAAATAAT 59.495 38.462 0.00 0.00 0.00 1.28
2938 3024 9.220767 GTCAGGATAATTTGTTCTGTATATCCC 57.779 37.037 1.83 0.00 39.61 3.85
2948 3034 6.431234 ACTCAACAGGTCAGGATAATTTGTTC 59.569 38.462 0.00 0.00 0.00 3.18
2971 3057 3.019564 ACAGCAAAAGAGCACAAAGACT 58.980 40.909 0.00 0.00 36.85 3.24
2972 3058 3.065925 AGACAGCAAAAGAGCACAAAGAC 59.934 43.478 0.00 0.00 36.85 3.01
2974 3060 3.181493 ACAGACAGCAAAAGAGCACAAAG 60.181 43.478 0.00 0.00 36.85 2.77
2975 3061 2.754552 ACAGACAGCAAAAGAGCACAAA 59.245 40.909 0.00 0.00 36.85 2.83
2977 3063 1.942657 GACAGACAGCAAAAGAGCACA 59.057 47.619 0.00 0.00 36.85 4.57
2978 3064 2.032204 CAGACAGACAGCAAAAGAGCAC 60.032 50.000 0.00 0.00 36.85 4.40
3079 3207 1.492176 GCTGAATTGGGATCCCTCTCA 59.508 52.381 31.05 25.41 36.94 3.27
3145 3273 5.977129 AGCATTTCTCTTTGTTTGGTAAACG 59.023 36.000 0.00 0.00 44.28 3.60
3263 3391 0.038166 GGGATGGGCTCAACTGACAA 59.962 55.000 0.00 0.00 0.00 3.18
3279 3407 0.770499 TGGCATGTTTGTCAGAGGGA 59.230 50.000 0.00 0.00 30.95 4.20
3285 3413 3.387374 AGTTTCCAATGGCATGTTTGTCA 59.613 39.130 0.00 0.00 42.74 3.58
3324 3452 2.755103 GTGCTAGTGAATTTCCTTGGGG 59.245 50.000 0.00 0.00 0.00 4.96
3457 3585 0.988832 GGTGGTCAGGGGTATCACAA 59.011 55.000 0.00 0.00 0.00 3.33
3458 3586 0.912487 GGGTGGTCAGGGGTATCACA 60.912 60.000 0.00 0.00 0.00 3.58
3459 3587 0.912487 TGGGTGGTCAGGGGTATCAC 60.912 60.000 0.00 0.00 0.00 3.06
3485 3613 6.373779 CAGTACATTGTGGTTTCTCACATTC 58.626 40.000 0.00 0.00 45.63 2.67
3503 3631 1.765904 TGGAACTTCCTGTGCAGTACA 59.234 47.619 9.31 0.00 37.46 2.90
3548 3676 7.486647 GCATTTTCTAACTGATCATCATGGTT 58.513 34.615 0.00 0.00 0.00 3.67
3561 3689 4.015872 TCCACCTTCGCATTTTCTAACT 57.984 40.909 0.00 0.00 0.00 2.24
3565 3693 5.041191 AGATATCCACCTTCGCATTTTCT 57.959 39.130 0.00 0.00 0.00 2.52
3612 3740 4.141711 TGACTGCATATGGAGTAACTTCCC 60.142 45.833 27.44 14.75 46.89 3.97
3772 3900 4.794334 TGTTACCACCTTTAAGGCTTTCA 58.206 39.130 11.45 0.99 39.63 2.69
4164 4292 7.970102 ACATGGTTACTTTGAAGTAGGTAAGA 58.030 34.615 0.00 0.00 42.04 2.10
4165 4293 9.148104 GTACATGGTTACTTTGAAGTAGGTAAG 57.852 37.037 0.00 0.00 42.04 2.34
4166 4294 8.649591 TGTACATGGTTACTTTGAAGTAGGTAA 58.350 33.333 0.00 0.00 42.04 2.85
4167 4295 8.090214 GTGTACATGGTTACTTTGAAGTAGGTA 58.910 37.037 0.00 0.00 42.04 3.08
4168 4296 6.932960 GTGTACATGGTTACTTTGAAGTAGGT 59.067 38.462 0.00 0.00 42.04 3.08
4169 4297 6.932400 TGTGTACATGGTTACTTTGAAGTAGG 59.068 38.462 0.00 0.00 42.04 3.18
4170 4298 7.956420 TGTGTACATGGTTACTTTGAAGTAG 57.044 36.000 0.00 0.00 42.04 2.57
4171 4299 9.647797 CTATGTGTACATGGTTACTTTGAAGTA 57.352 33.333 7.73 0.00 37.52 2.24
4172 4300 8.154856 ACTATGTGTACATGGTTACTTTGAAGT 58.845 33.333 8.02 1.60 44.10 3.01
4173 4301 8.547967 ACTATGTGTACATGGTTACTTTGAAG 57.452 34.615 8.02 0.00 44.10 3.02
4175 4303 9.594478 CATACTATGTGTACATGGTTACTTTGA 57.406 33.333 17.23 0.88 44.10 2.69
4176 4304 9.378551 ACATACTATGTGTACATGGTTACTTTG 57.621 33.333 17.23 10.82 44.10 2.77
4177 4305 9.953565 AACATACTATGTGTACATGGTTACTTT 57.046 29.630 17.23 5.74 44.10 2.66
4178 4306 9.953565 AAACATACTATGTGTACATGGTTACTT 57.046 29.630 17.23 5.69 44.10 2.24
4179 4307 9.953565 AAAACATACTATGTGTACATGGTTACT 57.046 29.630 17.23 3.17 44.10 2.24
4182 4310 8.026607 GCAAAAACATACTATGTGTACATGGTT 58.973 33.333 17.23 0.35 44.10 3.67
4184 4312 6.972328 GGCAAAAACATACTATGTGTACATGG 59.028 38.462 7.73 7.24 44.07 3.66
4185 4313 7.761409 AGGCAAAAACATACTATGTGTACATG 58.239 34.615 7.73 0.00 44.07 3.21
4186 4314 7.938140 AGGCAAAAACATACTATGTGTACAT 57.062 32.000 0.00 2.75 44.07 2.29
4187 4315 8.098286 AGTAGGCAAAAACATACTATGTGTACA 58.902 33.333 2.31 0.00 44.07 2.90
4188 4316 8.488651 AGTAGGCAAAAACATACTATGTGTAC 57.511 34.615 2.31 0.00 44.07 2.90
4189 4317 9.158233 GAAGTAGGCAAAAACATACTATGTGTA 57.842 33.333 2.31 0.00 44.07 2.90
4190 4318 7.663905 TGAAGTAGGCAAAAACATACTATGTGT 59.336 33.333 2.31 0.00 44.07 3.72
4191 4319 8.039603 TGAAGTAGGCAAAAACATACTATGTG 57.960 34.615 2.31 0.00 44.07 3.21
4192 4320 9.073475 TTTGAAGTAGGCAAAAACATACTATGT 57.927 29.630 0.00 0.00 36.34 2.29
4193 4321 9.559958 CTTTGAAGTAGGCAAAAACATACTATG 57.440 33.333 0.00 0.00 35.09 2.23
4194 4322 9.297037 ACTTTGAAGTAGGCAAAAACATACTAT 57.703 29.630 0.00 0.00 37.52 2.12
4195 4323 8.685838 ACTTTGAAGTAGGCAAAAACATACTA 57.314 30.769 0.00 0.00 37.52 1.82
4196 4324 7.582667 ACTTTGAAGTAGGCAAAAACATACT 57.417 32.000 0.00 0.00 37.52 2.12
4197 4325 9.177304 GTTACTTTGAAGTAGGCAAAAACATAC 57.823 33.333 4.03 0.00 42.04 2.39
4198 4326 9.127277 AGTTACTTTGAAGTAGGCAAAAACATA 57.873 29.630 4.03 0.00 42.04 2.29
4199 4327 8.007405 AGTTACTTTGAAGTAGGCAAAAACAT 57.993 30.769 4.03 0.00 42.04 2.71
4200 4328 7.399245 AGTTACTTTGAAGTAGGCAAAAACA 57.601 32.000 4.03 0.00 42.04 2.83
4201 4329 8.697846 AAAGTTACTTTGAAGTAGGCAAAAAC 57.302 30.769 9.77 0.00 42.04 2.43
4202 4330 9.145865 CAAAAGTTACTTTGAAGTAGGCAAAAA 57.854 29.630 11.35 0.00 42.04 1.94
4203 4331 8.308207 ACAAAAGTTACTTTGAAGTAGGCAAAA 58.692 29.630 11.35 0.00 42.04 2.44
4204 4332 7.832769 ACAAAAGTTACTTTGAAGTAGGCAAA 58.167 30.769 11.35 0.00 42.04 3.68
4205 4333 7.399245 ACAAAAGTTACTTTGAAGTAGGCAA 57.601 32.000 11.35 0.00 42.04 4.52
4206 4334 8.508883 TTACAAAAGTTACTTTGAAGTAGGCA 57.491 30.769 11.35 0.00 42.04 4.75
4207 4335 9.961265 AATTACAAAAGTTACTTTGAAGTAGGC 57.039 29.630 11.35 2.73 42.04 3.93
4231 4359 8.903820 GCTTCTACCAACAACCTAATTATCAAT 58.096 33.333 0.00 0.00 0.00 2.57
4232 4360 7.338449 GGCTTCTACCAACAACCTAATTATCAA 59.662 37.037 0.00 0.00 0.00 2.57
4233 4361 6.826741 GGCTTCTACCAACAACCTAATTATCA 59.173 38.462 0.00 0.00 0.00 2.15
4234 4362 6.826741 TGGCTTCTACCAACAACCTAATTATC 59.173 38.462 0.00 0.00 36.55 1.75
4235 4363 6.727394 TGGCTTCTACCAACAACCTAATTAT 58.273 36.000 0.00 0.00 36.55 1.28
4236 4364 6.129414 TGGCTTCTACCAACAACCTAATTA 57.871 37.500 0.00 0.00 36.55 1.40
4237 4365 4.993028 TGGCTTCTACCAACAACCTAATT 58.007 39.130 0.00 0.00 36.55 1.40
4238 4366 4.650972 TGGCTTCTACCAACAACCTAAT 57.349 40.909 0.00 0.00 36.55 1.73
4239 4367 4.440826 TTGGCTTCTACCAACAACCTAA 57.559 40.909 0.00 0.00 44.80 2.69
4264 4392 9.563898 GACGACGGAATATGATGTATATAACAA 57.436 33.333 0.00 0.00 42.70 2.83
4265 4393 8.953313 AGACGACGGAATATGATGTATATAACA 58.047 33.333 0.00 0.00 43.86 2.41
4266 4394 9.784680 AAGACGACGGAATATGATGTATATAAC 57.215 33.333 0.00 0.00 31.68 1.89
4268 4396 9.783256 CAAAGACGACGGAATATGATGTATATA 57.217 33.333 0.00 0.00 31.68 0.86
4269 4397 8.304596 ACAAAGACGACGGAATATGATGTATAT 58.695 33.333 0.00 0.00 33.33 0.86
4270 4398 7.654568 ACAAAGACGACGGAATATGATGTATA 58.345 34.615 0.00 0.00 0.00 1.47
4271 4399 6.513180 ACAAAGACGACGGAATATGATGTAT 58.487 36.000 0.00 0.00 0.00 2.29
4272 4400 5.898174 ACAAAGACGACGGAATATGATGTA 58.102 37.500 0.00 0.00 0.00 2.29
4273 4401 4.755411 ACAAAGACGACGGAATATGATGT 58.245 39.130 0.00 0.00 0.00 3.06
4274 4402 5.718649 AACAAAGACGACGGAATATGATG 57.281 39.130 0.00 0.00 0.00 3.07
4275 4403 6.814644 TGTAAACAAAGACGACGGAATATGAT 59.185 34.615 0.00 0.00 0.00 2.45
4276 4404 6.157904 TGTAAACAAAGACGACGGAATATGA 58.842 36.000 0.00 0.00 0.00 2.15
4277 4405 6.397831 TGTAAACAAAGACGACGGAATATG 57.602 37.500 0.00 0.00 0.00 1.78
4278 4406 7.605410 AATGTAAACAAAGACGACGGAATAT 57.395 32.000 0.00 0.00 0.00 1.28
4279 4407 7.814107 ACTAATGTAAACAAAGACGACGGAATA 59.186 33.333 0.00 0.00 0.00 1.75
4280 4408 5.934935 AATGTAAACAAAGACGACGGAAT 57.065 34.783 0.00 0.00 0.00 3.01
4281 4409 5.984926 ACTAATGTAAACAAAGACGACGGAA 59.015 36.000 0.00 0.00 0.00 4.30
4282 4410 5.531634 ACTAATGTAAACAAAGACGACGGA 58.468 37.500 0.00 0.00 0.00 4.69
4283 4411 5.834239 ACTAATGTAAACAAAGACGACGG 57.166 39.130 0.00 0.00 0.00 4.79
4284 4412 8.152159 GTCTTACTAATGTAAACAAAGACGACG 58.848 37.037 8.20 0.00 38.09 5.12
4285 4413 9.189723 AGTCTTACTAATGTAAACAAAGACGAC 57.810 33.333 14.37 10.71 40.70 4.34
4286 4414 9.188588 CAGTCTTACTAATGTAAACAAAGACGA 57.811 33.333 14.37 2.92 40.70 4.20
4287 4415 8.975439 ACAGTCTTACTAATGTAAACAAAGACG 58.025 33.333 14.37 12.51 40.70 4.18
4298 4426 8.993121 CAAGTCATCAAACAGTCTTACTAATGT 58.007 33.333 0.00 0.00 0.00 2.71
4299 4427 8.993121 ACAAGTCATCAAACAGTCTTACTAATG 58.007 33.333 0.00 0.00 0.00 1.90
4300 4428 9.209175 GACAAGTCATCAAACAGTCTTACTAAT 57.791 33.333 0.00 0.00 0.00 1.73
4301 4429 8.201464 TGACAAGTCATCAAACAGTCTTACTAA 58.799 33.333 0.00 0.00 34.14 2.24
4302 4430 7.722363 TGACAAGTCATCAAACAGTCTTACTA 58.278 34.615 0.00 0.00 34.14 1.82
4303 4431 6.582636 TGACAAGTCATCAAACAGTCTTACT 58.417 36.000 0.00 0.00 34.14 2.24
4304 4432 6.701841 TCTGACAAGTCATCAAACAGTCTTAC 59.298 38.462 3.01 0.00 39.13 2.34
4305 4433 6.701841 GTCTGACAAGTCATCAAACAGTCTTA 59.298 38.462 3.01 0.00 39.13 2.10
4306 4434 5.525378 GTCTGACAAGTCATCAAACAGTCTT 59.475 40.000 3.01 0.00 39.13 3.01
4307 4435 5.053145 GTCTGACAAGTCATCAAACAGTCT 58.947 41.667 3.01 0.00 39.13 3.24
4308 4436 5.053145 AGTCTGACAAGTCATCAAACAGTC 58.947 41.667 10.88 0.00 39.13 3.51
4309 4437 5.028549 AGTCTGACAAGTCATCAAACAGT 57.971 39.130 10.88 0.00 39.13 3.55
4310 4438 5.998454 AAGTCTGACAAGTCATCAAACAG 57.002 39.130 10.88 0.00 39.13 3.16
4311 4439 6.115446 AGAAAGTCTGACAAGTCATCAAACA 58.885 36.000 10.88 0.00 39.13 2.83
4312 4440 6.610741 AGAAAGTCTGACAAGTCATCAAAC 57.389 37.500 10.88 1.14 39.13 2.93
4313 4441 7.226720 GGTAAGAAAGTCTGACAAGTCATCAAA 59.773 37.037 10.88 0.00 39.13 2.69
4314 4442 6.706270 GGTAAGAAAGTCTGACAAGTCATCAA 59.294 38.462 10.88 0.00 39.13 2.57
4315 4443 6.042093 AGGTAAGAAAGTCTGACAAGTCATCA 59.958 38.462 10.88 0.00 39.13 3.07
4316 4444 6.459923 AGGTAAGAAAGTCTGACAAGTCATC 58.540 40.000 10.88 0.00 39.13 2.92
4317 4445 6.426646 AGGTAAGAAAGTCTGACAAGTCAT 57.573 37.500 10.88 0.16 39.13 3.06
4318 4446 5.871396 AGGTAAGAAAGTCTGACAAGTCA 57.129 39.130 10.88 2.56 38.06 3.41
4319 4447 6.281405 TGAAGGTAAGAAAGTCTGACAAGTC 58.719 40.000 10.88 4.13 28.97 3.01
4320 4448 6.127026 ACTGAAGGTAAGAAAGTCTGACAAGT 60.127 38.462 10.88 0.00 28.97 3.16
4321 4449 6.284459 ACTGAAGGTAAGAAAGTCTGACAAG 58.716 40.000 10.88 0.00 28.97 3.16
4322 4450 6.235231 ACTGAAGGTAAGAAAGTCTGACAA 57.765 37.500 10.88 0.00 28.97 3.18
4323 4451 5.871396 ACTGAAGGTAAGAAAGTCTGACA 57.129 39.130 10.88 0.00 28.97 3.58
4324 4452 6.641723 GTGTACTGAAGGTAAGAAAGTCTGAC 59.358 42.308 0.00 0.00 31.56 3.51
4325 4453 6.322969 TGTGTACTGAAGGTAAGAAAGTCTGA 59.677 38.462 0.00 0.00 31.56 3.27
4326 4454 6.513180 TGTGTACTGAAGGTAAGAAAGTCTG 58.487 40.000 0.00 0.00 31.56 3.51
4327 4455 6.726490 TGTGTACTGAAGGTAAGAAAGTCT 57.274 37.500 0.00 0.00 31.56 3.24
4328 4456 8.305317 ACTATGTGTACTGAAGGTAAGAAAGTC 58.695 37.037 0.00 0.00 31.56 3.01
4329 4457 8.191534 ACTATGTGTACTGAAGGTAAGAAAGT 57.808 34.615 0.00 0.00 31.56 2.66
4332 4460 9.251440 ACATACTATGTGTACTGAAGGTAAGAA 57.749 33.333 0.58 0.00 43.01 2.52
4470 4603 0.758685 TTGGGGCCTGGAACACTTTG 60.759 55.000 0.84 0.00 0.00 2.77
4474 4607 0.831711 ACAATTGGGGCCTGGAACAC 60.832 55.000 10.83 0.00 0.00 3.32
4482 4615 5.869649 ATGACTTTAATACAATTGGGGCC 57.130 39.130 10.83 0.00 0.00 5.80
4545 4678 9.182933 GGAGCTAAATAAAGACAATACTAGTCG 57.817 37.037 0.00 0.00 40.84 4.18
4583 4716 5.557891 AACAGCTCAGTTCATTTATCTGC 57.442 39.130 0.00 0.00 0.00 4.26
4633 4766 0.604578 ATGGATGCCAGTGTGTTTGC 59.395 50.000 0.00 0.00 36.75 3.68
4658 4791 4.438744 GGTTCAGAAAATTGGCTCGTATGG 60.439 45.833 0.00 0.00 0.00 2.74
4663 4796 1.135689 CCGGTTCAGAAAATTGGCTCG 60.136 52.381 0.00 0.00 0.00 5.03
4719 4852 3.801594 CCGTTTAAATGCAGCACAAAAGT 59.198 39.130 0.00 0.00 0.00 2.66
4720 4853 3.362888 GCCGTTTAAATGCAGCACAAAAG 60.363 43.478 0.00 1.24 0.00 2.27
4742 4883 7.191551 CACAATCCAACTATCTGTAGCAAATG 58.808 38.462 0.00 0.00 0.00 2.32
4768 4918 3.276857 AGCTCAAGTGGCAAGTATGATG 58.723 45.455 0.00 0.00 0.00 3.07
4775 4925 1.534595 GAGTTGAGCTCAAGTGGCAAG 59.465 52.381 35.59 0.00 43.58 4.01
4865 5015 2.474410 ACTCAAATGGAACGGAGGAC 57.526 50.000 0.00 0.00 0.00 3.85
5016 5166 1.604278 GTCAAACTCAGGCAACAGGTC 59.396 52.381 0.00 0.00 41.41 3.85
5104 5254 1.202475 CGAACCAAAACAAACTGGGGG 60.202 52.381 0.00 0.00 37.00 5.40
5186 5337 2.489073 CCAAGAAACAGCCCAGGTACTT 60.489 50.000 0.00 0.00 34.60 2.24
5203 5375 2.689983 GCATCAGGGATAACCAACCAAG 59.310 50.000 0.00 0.00 43.89 3.61
5204 5376 2.733956 GCATCAGGGATAACCAACCAA 58.266 47.619 0.00 0.00 43.89 3.67
5206 5378 1.308998 CGCATCAGGGATAACCAACC 58.691 55.000 0.00 0.00 43.89 3.77
5208 5380 2.799126 AACGCATCAGGGATAACCAA 57.201 45.000 0.00 0.00 43.89 3.67
5210 5382 3.279434 AGAAAACGCATCAGGGATAACC 58.721 45.455 0.00 0.00 40.67 2.85
5211 5383 4.965119 AAGAAAACGCATCAGGGATAAC 57.035 40.909 0.00 0.00 0.00 1.89
5330 5503 1.417517 AGAGGCAACATCACACTCACA 59.582 47.619 0.00 0.00 41.41 3.58
5331 5504 1.802960 CAGAGGCAACATCACACTCAC 59.197 52.381 0.00 0.00 41.41 3.51
5332 5505 1.271001 CCAGAGGCAACATCACACTCA 60.271 52.381 0.00 0.00 41.41 3.41
5333 5506 1.002430 TCCAGAGGCAACATCACACTC 59.998 52.381 0.00 0.00 41.41 3.51
5334 5507 1.059098 TCCAGAGGCAACATCACACT 58.941 50.000 0.00 0.00 41.41 3.55
5335 5508 1.896220 TTCCAGAGGCAACATCACAC 58.104 50.000 0.00 0.00 41.41 3.82
5336 5509 2.885135 ATTCCAGAGGCAACATCACA 57.115 45.000 0.00 0.00 41.41 3.58
5337 5510 7.516198 AATATTATTCCAGAGGCAACATCAC 57.484 36.000 0.00 0.00 41.41 3.06
5338 5511 7.231317 GGAAATATTATTCCAGAGGCAACATCA 59.769 37.037 1.87 0.00 46.70 3.07
5339 5512 7.597386 GGAAATATTATTCCAGAGGCAACATC 58.403 38.462 1.87 0.00 46.70 3.06
5340 5513 7.530426 GGAAATATTATTCCAGAGGCAACAT 57.470 36.000 1.87 0.00 46.70 2.71
5341 5514 6.959639 GGAAATATTATTCCAGAGGCAACA 57.040 37.500 1.87 0.00 46.70 3.33
5350 5523 9.699410 ACAGAATGACAAGGAAATATTATTCCA 57.301 29.630 8.56 0.00 45.32 3.53
5355 5528 9.679661 TGCTAACAGAATGACAAGGAAATATTA 57.320 29.630 0.00 0.00 39.69 0.98
5379 5572 2.807967 GCTCCCCTTCAAAAATGTTTGC 59.192 45.455 3.24 0.00 43.30 3.68
5385 5578 3.160269 CACTCTGCTCCCCTTCAAAAAT 58.840 45.455 0.00 0.00 0.00 1.82
5393 5586 1.261238 GCTGTACACTCTGCTCCCCT 61.261 60.000 0.00 0.00 0.00 4.79
5396 5589 1.734047 CGAAGCTGTACACTCTGCTCC 60.734 57.143 7.70 0.00 40.65 4.70
5431 5626 3.710209 ATAGGGCTAGGCTGCATAAAG 57.290 47.619 16.80 0.00 34.04 1.85
5435 5630 3.588842 TCATAAATAGGGCTAGGCTGCAT 59.411 43.478 16.80 0.00 34.04 3.96
5442 5637 4.569943 ACACGCATCATAAATAGGGCTAG 58.430 43.478 0.00 0.00 0.00 3.42
5452 5647 3.331150 ACCGAGAAAACACGCATCATAA 58.669 40.909 0.00 0.00 0.00 1.90
5471 5666 2.187946 CTCGCCAGGGACATGACC 59.812 66.667 5.56 5.56 0.00 4.02
5472 5667 2.187946 CCTCGCCAGGGACATGAC 59.812 66.667 0.00 0.00 35.89 3.06
5473 5668 2.284625 ACCTCGCCAGGGACATGA 60.285 61.111 1.31 0.00 45.53 3.07
5508 5704 7.686434 TCCAGCTAAACTAGGATTGTTTTACT 58.314 34.615 0.00 0.00 38.41 2.24
5515 5711 8.682936 ATTTACATCCAGCTAAACTAGGATTG 57.317 34.615 0.00 0.00 35.41 2.67
5516 5712 7.657761 CGATTTACATCCAGCTAAACTAGGATT 59.342 37.037 0.00 0.00 35.41 3.01
5518 5714 6.322969 TCGATTTACATCCAGCTAAACTAGGA 59.677 38.462 0.00 0.00 32.41 2.94
5521 5717 7.491372 CAGTTCGATTTACATCCAGCTAAACTA 59.509 37.037 0.00 0.00 0.00 2.24
5534 5730 3.585862 GGCACTCTCAGTTCGATTTACA 58.414 45.455 0.00 0.00 0.00 2.41
5535 5731 2.599082 CGGCACTCTCAGTTCGATTTAC 59.401 50.000 0.00 0.00 0.00 2.01
5536 5732 2.230508 ACGGCACTCTCAGTTCGATTTA 59.769 45.455 0.00 0.00 0.00 1.40
5537 5733 1.000955 ACGGCACTCTCAGTTCGATTT 59.999 47.619 0.00 0.00 0.00 2.17
5538 5734 0.603569 ACGGCACTCTCAGTTCGATT 59.396 50.000 0.00 0.00 0.00 3.34
5539 5735 0.603569 AACGGCACTCTCAGTTCGAT 59.396 50.000 0.00 0.00 0.00 3.59
5540 5736 0.387929 AAACGGCACTCTCAGTTCGA 59.612 50.000 0.00 0.00 0.00 3.71
5541 5737 1.070577 CAAAACGGCACTCTCAGTTCG 60.071 52.381 0.00 0.00 0.00 3.95
5542 5738 1.264288 CCAAAACGGCACTCTCAGTTC 59.736 52.381 0.00 0.00 0.00 3.01
5543 5739 1.308998 CCAAAACGGCACTCTCAGTT 58.691 50.000 0.00 0.00 0.00 3.16
5544 5740 3.006672 CCAAAACGGCACTCTCAGT 57.993 52.632 0.00 0.00 0.00 3.41
5554 5750 1.384222 GCTCCCCATAGCCAAAACGG 61.384 60.000 0.00 0.00 36.45 4.44
5555 5751 0.679640 TGCTCCCCATAGCCAAAACG 60.680 55.000 0.00 0.00 42.05 3.60
5556 5752 1.780503 ATGCTCCCCATAGCCAAAAC 58.219 50.000 0.00 0.00 42.05 2.43
5557 5753 3.499338 CATATGCTCCCCATAGCCAAAA 58.501 45.455 0.00 0.00 42.05 2.44
5558 5754 2.818970 GCATATGCTCCCCATAGCCAAA 60.819 50.000 20.64 0.00 42.05 3.28
5559 5755 1.272092 GCATATGCTCCCCATAGCCAA 60.272 52.381 20.64 0.00 42.05 4.52
5560 5756 0.329261 GCATATGCTCCCCATAGCCA 59.671 55.000 20.64 0.00 42.05 4.75
5561 5757 3.181526 GCATATGCTCCCCATAGCC 57.818 57.895 20.64 0.00 42.05 3.93
5572 5768 3.819337 AGTGTTCATCCATGAGCATATGC 59.181 43.478 20.36 20.36 46.91 3.14
5573 5769 7.500720 TTTAGTGTTCATCCATGAGCATATG 57.499 36.000 9.05 0.00 46.91 1.78
5574 5770 8.701908 AATTTAGTGTTCATCCATGAGCATAT 57.298 30.769 9.05 4.86 46.91 1.78
5575 5771 9.625747 TTAATTTAGTGTTCATCCATGAGCATA 57.374 29.630 9.05 1.95 46.91 3.14
5576 5772 8.523915 TTAATTTAGTGTTCATCCATGAGCAT 57.476 30.769 9.05 2.72 46.91 3.79
5577 5773 7.936496 TTAATTTAGTGTTCATCCATGAGCA 57.064 32.000 2.23 2.23 44.10 4.26
5578 5774 9.638239 TTTTTAATTTAGTGTTCATCCATGAGC 57.362 29.630 0.00 0.00 38.19 4.26
5637 5833 7.068103 AGACTAACATGAACATCCACACAAAAA 59.932 33.333 0.00 0.00 0.00 1.94
5638 5834 6.545666 AGACTAACATGAACATCCACACAAAA 59.454 34.615 0.00 0.00 0.00 2.44
5639 5835 6.061441 AGACTAACATGAACATCCACACAAA 58.939 36.000 0.00 0.00 0.00 2.83
5640 5836 5.620206 AGACTAACATGAACATCCACACAA 58.380 37.500 0.00 0.00 0.00 3.33
5641 5837 5.227569 AGACTAACATGAACATCCACACA 57.772 39.130 0.00 0.00 0.00 3.72
5642 5838 6.649141 TGTTAGACTAACATGAACATCCACAC 59.351 38.462 21.54 0.00 43.23 3.82
5643 5839 6.764379 TGTTAGACTAACATGAACATCCACA 58.236 36.000 21.54 0.00 43.23 4.17
5644 5840 7.387948 ACTTGTTAGACTAACATGAACATCCAC 59.612 37.037 32.17 6.68 46.89 4.02
5645 5841 7.387673 CACTTGTTAGACTAACATGAACATCCA 59.612 37.037 32.17 15.38 46.89 3.41
5646 5842 7.387948 ACACTTGTTAGACTAACATGAACATCC 59.612 37.037 32.17 6.69 46.89 3.51
5647 5843 8.223769 CACACTTGTTAGACTAACATGAACATC 58.776 37.037 32.17 7.28 46.89 3.06
5648 5844 7.307989 GCACACTTGTTAGACTAACATGAACAT 60.308 37.037 32.17 16.85 46.89 2.71
5649 5845 6.018262 GCACACTTGTTAGACTAACATGAACA 60.018 38.462 32.17 17.56 46.89 3.18
5650 5846 6.202954 AGCACACTTGTTAGACTAACATGAAC 59.797 38.462 32.17 21.92 46.89 3.18
5651 5847 6.288294 AGCACACTTGTTAGACTAACATGAA 58.712 36.000 32.17 18.12 46.89 2.57
5652 5848 5.853936 AGCACACTTGTTAGACTAACATGA 58.146 37.500 32.17 18.67 46.89 3.07
5653 5849 6.365839 CAAGCACACTTGTTAGACTAACATG 58.634 40.000 27.34 27.34 46.89 3.21
5654 5850 6.545504 CAAGCACACTTGTTAGACTAACAT 57.454 37.500 24.92 11.43 46.89 2.71
5655 5851 5.984233 CAAGCACACTTGTTAGACTAACA 57.016 39.130 21.54 21.54 46.84 2.41
5667 5863 7.660112 TCACATGAAAATTATCAAGCACACTT 58.340 30.769 0.00 0.00 36.19 3.16
5668 5864 7.218228 TCACATGAAAATTATCAAGCACACT 57.782 32.000 0.00 0.00 32.06 3.55
5669 5865 7.872163 TTCACATGAAAATTATCAAGCACAC 57.128 32.000 0.00 0.00 32.06 3.82
5670 5866 7.114670 CGTTTCACATGAAAATTATCAAGCACA 59.885 33.333 8.58 0.00 44.58 4.57
5671 5867 7.410728 CCGTTTCACATGAAAATTATCAAGCAC 60.411 37.037 8.58 0.00 44.58 4.40
5672 5868 6.585702 CCGTTTCACATGAAAATTATCAAGCA 59.414 34.615 8.58 0.00 44.58 3.91
5673 5869 6.034898 CCCGTTTCACATGAAAATTATCAAGC 59.965 38.462 8.58 0.00 44.58 4.01
5674 5870 7.312154 TCCCGTTTCACATGAAAATTATCAAG 58.688 34.615 8.58 0.00 44.58 3.02
5675 5871 7.220741 TCCCGTTTCACATGAAAATTATCAA 57.779 32.000 8.58 0.00 44.58 2.57
5676 5872 6.825944 TCCCGTTTCACATGAAAATTATCA 57.174 33.333 8.58 0.00 44.58 2.15
5677 5873 7.591426 GCTATCCCGTTTCACATGAAAATTATC 59.409 37.037 8.58 0.00 44.58 1.75
5678 5874 7.068103 TGCTATCCCGTTTCACATGAAAATTAT 59.932 33.333 8.58 4.04 44.58 1.28
5679 5875 6.375736 TGCTATCCCGTTTCACATGAAAATTA 59.624 34.615 8.58 0.00 44.58 1.40
5680 5876 5.184864 TGCTATCCCGTTTCACATGAAAATT 59.815 36.000 8.58 0.00 44.58 1.82
5681 5877 4.704540 TGCTATCCCGTTTCACATGAAAAT 59.295 37.500 8.58 2.27 44.58 1.82
5682 5878 4.075682 TGCTATCCCGTTTCACATGAAAA 58.924 39.130 8.58 0.00 44.58 2.29
5683 5879 3.680490 TGCTATCCCGTTTCACATGAAA 58.320 40.909 0.00 2.89 41.29 2.69
5684 5880 3.270027 CTGCTATCCCGTTTCACATGAA 58.730 45.455 0.00 0.00 0.00 2.57
5685 5881 2.236146 ACTGCTATCCCGTTTCACATGA 59.764 45.455 0.00 0.00 0.00 3.07
5686 5882 2.352651 CACTGCTATCCCGTTTCACATG 59.647 50.000 0.00 0.00 0.00 3.21
5687 5883 2.632377 CACTGCTATCCCGTTTCACAT 58.368 47.619 0.00 0.00 0.00 3.21
5688 5884 1.943968 GCACTGCTATCCCGTTTCACA 60.944 52.381 0.00 0.00 0.00 3.58
5689 5885 0.727398 GCACTGCTATCCCGTTTCAC 59.273 55.000 0.00 0.00 0.00 3.18
5690 5886 0.613260 AGCACTGCTATCCCGTTTCA 59.387 50.000 0.21 0.00 36.99 2.69
5691 5887 1.739067 AAGCACTGCTATCCCGTTTC 58.261 50.000 3.33 0.00 38.25 2.78
5692 5888 1.812571 CAAAGCACTGCTATCCCGTTT 59.187 47.619 3.33 0.00 38.25 3.60
5693 5889 1.271379 ACAAAGCACTGCTATCCCGTT 60.271 47.619 3.33 0.00 38.25 4.44
5694 5890 0.324943 ACAAAGCACTGCTATCCCGT 59.675 50.000 3.33 0.00 38.25 5.28
5695 5891 1.131126 CAACAAAGCACTGCTATCCCG 59.869 52.381 3.33 0.00 38.25 5.14
5696 5892 1.474077 CCAACAAAGCACTGCTATCCC 59.526 52.381 3.33 0.00 38.25 3.85
5697 5893 2.095059 CACCAACAAAGCACTGCTATCC 60.095 50.000 3.33 0.00 38.25 2.59
5698 5894 2.813754 TCACCAACAAAGCACTGCTATC 59.186 45.455 3.33 0.00 38.25 2.08
5699 5895 2.862541 TCACCAACAAAGCACTGCTAT 58.137 42.857 3.33 0.00 38.25 2.97
5700 5896 2.340210 TCACCAACAAAGCACTGCTA 57.660 45.000 3.33 0.00 38.25 3.49
5701 5897 1.473258 TTCACCAACAAAGCACTGCT 58.527 45.000 0.00 0.00 42.56 4.24
5702 5898 2.292103 TTTCACCAACAAAGCACTGC 57.708 45.000 0.00 0.00 0.00 4.40
5758 5954 6.650807 TCACACCAAAATGTTACTTGCAAAAA 59.349 30.769 0.00 0.00 0.00 1.94
5759 5955 6.091441 GTCACACCAAAATGTTACTTGCAAAA 59.909 34.615 0.00 0.00 0.00 2.44
5760 5956 5.578727 GTCACACCAAAATGTTACTTGCAAA 59.421 36.000 0.00 0.00 0.00 3.68
5761 5957 5.105752 GTCACACCAAAATGTTACTTGCAA 58.894 37.500 0.00 0.00 0.00 4.08
5762 5958 4.158579 TGTCACACCAAAATGTTACTTGCA 59.841 37.500 0.00 0.00 29.72 4.08
5763 5959 4.677584 TGTCACACCAAAATGTTACTTGC 58.322 39.130 0.00 0.00 29.72 4.01
5764 5960 5.743398 CACTGTCACACCAAAATGTTACTTG 59.257 40.000 0.00 0.00 29.72 3.16
5765 5961 5.650266 TCACTGTCACACCAAAATGTTACTT 59.350 36.000 0.00 0.00 29.72 2.24
5766 5962 5.189928 TCACTGTCACACCAAAATGTTACT 58.810 37.500 0.00 0.00 29.72 2.24
5767 5963 5.493133 TCACTGTCACACCAAAATGTTAC 57.507 39.130 0.00 0.00 0.00 2.50
5768 5964 6.707440 ATTCACTGTCACACCAAAATGTTA 57.293 33.333 0.00 0.00 0.00 2.41
5769 5965 5.596836 ATTCACTGTCACACCAAAATGTT 57.403 34.783 0.00 0.00 0.00 2.71
5770 5966 6.899393 ATATTCACTGTCACACCAAAATGT 57.101 33.333 0.00 0.00 0.00 2.71
5771 5967 7.121168 AGGTATATTCACTGTCACACCAAAATG 59.879 37.037 0.00 0.00 0.00 2.32
5772 5968 7.175104 AGGTATATTCACTGTCACACCAAAAT 58.825 34.615 0.00 0.00 0.00 1.82
5773 5969 6.539173 AGGTATATTCACTGTCACACCAAAA 58.461 36.000 0.00 0.00 0.00 2.44
5774 5970 6.121776 AGGTATATTCACTGTCACACCAAA 57.878 37.500 0.00 0.00 0.00 3.28
5775 5971 5.755409 AGGTATATTCACTGTCACACCAA 57.245 39.130 0.00 0.00 0.00 3.67
5776 5972 8.721133 ATATAGGTATATTCACTGTCACACCA 57.279 34.615 0.00 0.00 0.00 4.17
5777 5973 9.998106 AAATATAGGTATATTCACTGTCACACC 57.002 33.333 3.28 0.00 37.77 4.16
5826 6022 2.022240 GCGGTTCTGCCCACCAAAAA 62.022 55.000 0.00 0.00 33.36 1.94
5827 6023 2.494530 GCGGTTCTGCCCACCAAAA 61.495 57.895 0.00 0.00 33.36 2.44
5828 6024 2.909965 GCGGTTCTGCCCACCAAA 60.910 61.111 0.00 0.00 33.36 3.28
5829 6025 4.196778 TGCGGTTCTGCCCACCAA 62.197 61.111 1.01 0.00 33.36 3.67
5830 6026 4.641645 CTGCGGTTCTGCCCACCA 62.642 66.667 1.01 0.00 33.36 4.17
5831 6027 3.842925 TTCTGCGGTTCTGCCCACC 62.843 63.158 1.01 0.00 0.00 4.61
5832 6028 2.281484 TTCTGCGGTTCTGCCCAC 60.281 61.111 1.01 0.00 0.00 4.61
5833 6029 2.032528 CTTCTGCGGTTCTGCCCA 59.967 61.111 1.01 0.00 0.00 5.36
5834 6030 3.435186 GCTTCTGCGGTTCTGCCC 61.435 66.667 1.01 0.00 0.00 5.36
5835 6031 0.744414 TATGCTTCTGCGGTTCTGCC 60.744 55.000 1.01 0.00 43.34 4.85
5836 6032 1.303309 ATATGCTTCTGCGGTTCTGC 58.697 50.000 0.00 0.00 43.34 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.