Multiple sequence alignment - TraesCS1B01G373900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G373900 chr1B 100.000 4128 0 0 1 4128 604322332 604318205 0.000000e+00 7624.0
1 TraesCS1B01G373900 chr1B 91.667 120 10 0 3406 3525 67778959 67779078 2.550000e-37 167.0
2 TraesCS1B01G373900 chr1A 86.543 1345 123 25 1809 3140 539972579 539971280 0.000000e+00 1428.0
3 TraesCS1B01G373900 chr1A 88.296 769 32 17 1 756 539974574 539973851 0.000000e+00 869.0
4 TraesCS1B01G373900 chr1A 86.949 590 50 14 3523 4091 539970984 539970401 4.500000e-179 638.0
5 TraesCS1B01G373900 chr1A 93.798 258 14 1 3132 3387 539971319 539971062 1.800000e-103 387.0
6 TraesCS1B01G373900 chr1A 87.791 172 11 5 1265 1436 539973211 539973050 4.210000e-45 193.0
7 TraesCS1B01G373900 chr1A 92.537 134 5 2 1438 1570 588384898 588384769 1.960000e-43 187.0
8 TraesCS1B01G373900 chr1A 100.000 43 0 0 296 338 12218778 12218820 3.420000e-11 80.5
9 TraesCS1B01G373900 chr1D 86.650 1176 95 40 1 1148 444344725 444343584 0.000000e+00 1245.0
10 TraesCS1B01G373900 chr1D 86.767 1058 105 18 2095 3140 444342818 444341784 0.000000e+00 1146.0
11 TraesCS1B01G373900 chr1D 89.198 611 40 11 3529 4128 444341491 444340896 0.000000e+00 739.0
12 TraesCS1B01G373900 chr1D 91.016 256 17 4 3132 3387 444341823 444341574 1.420000e-89 340.0
13 TraesCS1B01G373900 chr1D 91.892 74 6 0 1054 1127 99471170 99471097 2.030000e-18 104.0
14 TraesCS1B01G373900 chrUn 93.985 133 2 3 1438 1569 322720417 322720544 3.260000e-46 196.0
15 TraesCS1B01G373900 chrUn 83.756 197 31 1 296 492 87835060 87835255 7.050000e-43 185.0
16 TraesCS1B01G373900 chr6B 94.488 127 4 3 1438 1562 98857888 98858013 4.210000e-45 193.0
17 TraesCS1B01G373900 chr6B 91.803 122 10 0 3404 3525 164882914 164883035 1.970000e-38 171.0
18 TraesCS1B01G373900 chr5B 94.531 128 1 4 1438 1564 563340627 563340505 4.210000e-45 193.0
19 TraesCS1B01G373900 chr5B 93.023 129 6 3 1438 1565 589585146 589585272 7.050000e-43 185.0
20 TraesCS1B01G373900 chr5B 89.262 149 6 7 1438 1585 383524772 383524633 1.180000e-40 178.0
21 TraesCS1B01G373900 chr5B 91.736 121 10 0 3405 3525 498793931 498794051 7.100000e-38 169.0
22 TraesCS1B01G373900 chr5B 89.922 129 12 1 3397 3525 641041104 641040977 9.180000e-37 165.0
23 TraesCS1B01G373900 chr5B 81.429 140 10 8 991 1129 53259321 53259445 2.630000e-17 100.0
24 TraesCS1B01G373900 chr5B 90.164 61 5 1 1065 1125 385243510 385243569 1.230000e-10 78.7
25 TraesCS1B01G373900 chr6A 92.593 135 2 5 1438 1571 286338722 286338849 1.960000e-43 187.0
26 TraesCS1B01G373900 chr6A 92.727 55 3 1 1071 1125 14540278 14540225 1.230000e-10 78.7
27 TraesCS1B01G373900 chr5A 92.593 135 3 4 1438 1571 696840444 696840572 1.960000e-43 187.0
28 TraesCS1B01G373900 chr5A 92.593 135 3 4 1438 1571 696879533 696879661 1.960000e-43 187.0
29 TraesCS1B01G373900 chr7D 89.928 139 12 2 3387 3525 277741814 277741950 1.180000e-40 178.0
30 TraesCS1B01G373900 chr4B 92.562 121 9 0 3408 3528 27399534 27399414 1.530000e-39 174.0
31 TraesCS1B01G373900 chr3D 91.339 127 11 0 3405 3531 499633722 499633596 1.530000e-39 174.0
32 TraesCS1B01G373900 chr3D 83.942 137 6 10 994 1129 550515496 550515617 2.610000e-22 117.0
33 TraesCS1B01G373900 chr3D 89.873 79 8 0 1051 1129 274336172 274336094 7.300000e-18 102.0
34 TraesCS1B01G373900 chr4D 91.870 123 7 3 3404 3525 492582487 492582367 7.100000e-38 169.0
35 TraesCS1B01G373900 chr5D 89.231 130 13 1 3404 3533 47284004 47283876 1.190000e-35 161.0
36 TraesCS1B01G373900 chr5D 94.737 76 3 1 1054 1129 553219772 553219698 2.610000e-22 117.0
37 TraesCS1B01G373900 chr5D 94.737 76 3 1 1054 1129 553254098 553254024 2.610000e-22 117.0
38 TraesCS1B01G373900 chr2A 76.500 200 28 10 296 482 18003750 18003943 1.580000e-14 91.6
39 TraesCS1B01G373900 chr3A 97.959 49 1 0 293 341 713994965 713995013 7.350000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G373900 chr1B 604318205 604322332 4127 True 7624.0 7624 100.00000 1 4128 1 chr1B.!!$R1 4127
1 TraesCS1B01G373900 chr1A 539970401 539974574 4173 True 703.0 1428 88.67540 1 4091 5 chr1A.!!$R2 4090
2 TraesCS1B01G373900 chr1D 444340896 444344725 3829 True 867.5 1245 88.40775 1 4128 4 chr1D.!!$R2 4127

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
775 789 0.106819 GCAGCAACCTCATCCTCCAT 60.107 55.0 0.00 0.0 0.00 3.41 F
1443 1598 0.101939 GAACGTATCCAGGTCCGTCC 59.898 60.0 0.00 0.0 32.30 4.79 F
1558 1713 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.0 13.64 0.0 46.06 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1662 1859 0.037590 AACGGCATTTCTGGCTACCA 59.962 50.0 0.00 0.00 45.42 3.25 R
2434 2853 0.174617 AGGCAAAACCACCAACGTTG 59.825 50.0 21.47 21.47 43.14 4.10 R
3501 3985 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.00 44.66 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 2.032528 CGCCTCCTTGGTCAGCAA 59.967 61.111 0.00 0.00 38.35 3.91
260 261 3.760035 TCCTCCGAGGCGTGCTTC 61.760 66.667 9.87 0.00 34.61 3.86
261 262 3.764466 CCTCCGAGGCGTGCTTCT 61.764 66.667 0.18 0.00 0.00 2.85
262 263 2.202676 CTCCGAGGCGTGCTTCTC 60.203 66.667 2.43 0.00 0.00 2.87
263 264 3.708220 CTCCGAGGCGTGCTTCTCC 62.708 68.421 2.43 0.00 0.00 3.71
264 265 3.764466 CCGAGGCGTGCTTCTCCT 61.764 66.667 2.43 0.00 33.45 3.69
265 266 2.262915 CGAGGCGTGCTTCTCCTT 59.737 61.111 2.43 0.00 30.54 3.36
490 491 4.356979 GACCACATCGGAGGAGGA 57.643 61.111 12.97 0.00 38.63 3.71
491 492 2.119886 GACCACATCGGAGGAGGAG 58.880 63.158 12.97 0.00 38.63 3.69
492 493 1.381872 ACCACATCGGAGGAGGAGG 60.382 63.158 12.97 3.83 40.04 4.30
493 494 1.075970 CCACATCGGAGGAGGAGGA 60.076 63.158 0.00 0.00 36.93 3.71
498 499 2.305314 ATCGGAGGAGGAGGAGGGTG 62.305 65.000 0.00 0.00 0.00 4.61
533 534 4.070552 GGAGTTCGCCCGCTGAGT 62.071 66.667 0.00 0.00 0.00 3.41
726 740 1.081509 CAGCTCTATCTCCTCGCGC 60.082 63.158 0.00 0.00 0.00 6.86
727 741 2.257067 GCTCTATCTCCTCGCGCC 59.743 66.667 0.00 0.00 0.00 6.53
732 746 0.803117 CTATCTCCTCGCGCCGATAA 59.197 55.000 0.00 0.00 34.61 1.75
733 747 1.402259 CTATCTCCTCGCGCCGATAAT 59.598 52.381 0.00 0.00 34.61 1.28
758 772 4.862902 TTTTGGAAATTTCTCATCGGCA 57.137 36.364 17.42 2.85 0.00 5.69
759 773 4.439305 TTTGGAAATTTCTCATCGGCAG 57.561 40.909 17.42 0.00 0.00 4.85
761 775 1.745087 GGAAATTTCTCATCGGCAGCA 59.255 47.619 17.42 0.00 0.00 4.41
762 776 2.164219 GGAAATTTCTCATCGGCAGCAA 59.836 45.455 17.42 0.00 0.00 3.91
764 778 1.098050 ATTTCTCATCGGCAGCAACC 58.902 50.000 0.00 0.00 0.00 3.77
766 780 0.391661 TTCTCATCGGCAGCAACCTC 60.392 55.000 0.00 0.00 0.00 3.85
767 781 1.078918 CTCATCGGCAGCAACCTCA 60.079 57.895 0.00 0.00 0.00 3.86
768 782 0.463295 CTCATCGGCAGCAACCTCAT 60.463 55.000 0.00 0.00 0.00 2.90
769 783 0.462581 TCATCGGCAGCAACCTCATC 60.463 55.000 0.00 0.00 0.00 2.92
770 784 1.153086 ATCGGCAGCAACCTCATCC 60.153 57.895 0.00 0.00 0.00 3.51
771 785 1.630126 ATCGGCAGCAACCTCATCCT 61.630 55.000 0.00 0.00 0.00 3.24
772 786 1.817099 CGGCAGCAACCTCATCCTC 60.817 63.158 0.00 0.00 0.00 3.71
773 787 1.452833 GGCAGCAACCTCATCCTCC 60.453 63.158 0.00 0.00 0.00 4.30
774 788 1.300963 GCAGCAACCTCATCCTCCA 59.699 57.895 0.00 0.00 0.00 3.86
775 789 0.106819 GCAGCAACCTCATCCTCCAT 60.107 55.000 0.00 0.00 0.00 3.41
776 790 1.684248 GCAGCAACCTCATCCTCCATT 60.684 52.381 0.00 0.00 0.00 3.16
777 791 2.295885 CAGCAACCTCATCCTCCATTC 58.704 52.381 0.00 0.00 0.00 2.67
778 792 1.213926 AGCAACCTCATCCTCCATTCC 59.786 52.381 0.00 0.00 0.00 3.01
779 793 1.752084 GCAACCTCATCCTCCATTCCC 60.752 57.143 0.00 0.00 0.00 3.97
795 809 0.539986 TCCCGCTATTCTGGTGAACC 59.460 55.000 0.00 0.00 34.71 3.62
797 811 1.339631 CCCGCTATTCTGGTGAACCAA 60.340 52.381 3.33 0.00 46.97 3.67
802 816 1.463674 ATTCTGGTGAACCAATCGGC 58.536 50.000 3.33 0.00 46.97 5.54
820 834 4.161295 CCGGCCCATCAGCGAAGA 62.161 66.667 0.00 0.00 0.00 2.87
822 836 2.892425 GGCCCATCAGCGAAGACG 60.892 66.667 0.00 0.00 42.93 4.18
824 838 1.141019 GCCCATCAGCGAAGACGTA 59.859 57.895 0.00 0.00 41.98 3.57
825 839 0.872021 GCCCATCAGCGAAGACGTAG 60.872 60.000 0.00 0.00 41.98 3.51
826 840 0.738975 CCCATCAGCGAAGACGTAGA 59.261 55.000 0.00 0.00 41.98 2.59
828 842 1.534175 CCATCAGCGAAGACGTAGACC 60.534 57.143 0.00 0.00 41.98 3.85
829 843 1.132453 CATCAGCGAAGACGTAGACCA 59.868 52.381 0.00 0.00 41.98 4.02
830 844 0.803117 TCAGCGAAGACGTAGACCAG 59.197 55.000 0.00 0.00 41.98 4.00
831 845 0.798771 CAGCGAAGACGTAGACCAGC 60.799 60.000 0.00 0.00 41.98 4.85
833 847 1.139095 CGAAGACGTAGACCAGCCC 59.861 63.158 0.00 0.00 34.56 5.19
834 848 1.592400 CGAAGACGTAGACCAGCCCA 61.592 60.000 0.00 0.00 34.56 5.36
835 849 0.173708 GAAGACGTAGACCAGCCCAG 59.826 60.000 0.00 0.00 0.00 4.45
836 850 1.258445 AAGACGTAGACCAGCCCAGG 61.258 60.000 0.00 0.00 0.00 4.45
837 851 3.372554 GACGTAGACCAGCCCAGGC 62.373 68.421 0.00 0.00 42.33 4.85
856 870 2.478335 CTTCCGCCTGGCCCAGTAAA 62.478 60.000 14.12 0.00 34.14 2.01
864 878 1.810030 GGCCCAGTAAAGTCGAGCG 60.810 63.158 0.00 0.00 0.00 5.03
866 880 1.810030 CCCAGTAAAGTCGAGCGCC 60.810 63.158 2.29 0.00 0.00 6.53
872 886 0.388134 TAAAGTCGAGCGCCACTGAC 60.388 55.000 2.29 7.33 0.00 3.51
899 925 2.482333 CCTAGGTCGAGCCGTCTGG 61.482 68.421 11.73 2.95 43.70 3.86
900 926 2.439701 TAGGTCGAGCCGTCTGGG 60.440 66.667 11.73 0.00 43.70 4.45
907 933 2.997897 AGCCGTCTGGGTCTGACC 60.998 66.667 18.65 18.65 44.55 4.02
908 934 4.436998 GCCGTCTGGGTCTGACCG 62.437 72.222 19.98 8.00 39.83 4.79
925 956 4.547905 GACGCGAGCCCGAATCGA 62.548 66.667 15.93 0.00 42.76 3.59
927 958 4.847516 CGCGAGCCCGAATCGACA 62.848 66.667 3.36 0.00 42.76 4.35
965 1004 4.162690 CGGCGGAAGGAAGGGGAG 62.163 72.222 0.00 0.00 0.00 4.30
967 1006 4.840005 GCGGAAGGAAGGGGAGCG 62.840 72.222 0.00 0.00 0.00 5.03
969 1008 2.904131 GGAAGGAAGGGGAGCGAG 59.096 66.667 0.00 0.00 0.00 5.03
970 1009 2.188207 GAAGGAAGGGGAGCGAGC 59.812 66.667 0.00 0.00 0.00 5.03
983 1022 2.671177 GCGAGCGAGCAGAAGCAAA 61.671 57.895 0.00 0.00 45.49 3.68
984 1023 1.419143 CGAGCGAGCAGAAGCAAAG 59.581 57.895 0.00 0.00 45.49 2.77
986 1025 0.671781 GAGCGAGCAGAAGCAAAGGA 60.672 55.000 0.00 0.00 45.49 3.36
987 1026 0.673022 AGCGAGCAGAAGCAAAGGAG 60.673 55.000 0.00 0.00 45.49 3.69
989 1028 1.642952 CGAGCAGAAGCAAAGGAGGC 61.643 60.000 0.00 0.00 45.49 4.70
990 1029 1.642952 GAGCAGAAGCAAAGGAGGCG 61.643 60.000 0.00 0.00 45.49 5.52
995 1034 3.273788 AAGCAAAGGAGGCGGAGGG 62.274 63.158 0.00 0.00 36.08 4.30
1120 1163 4.988716 ACGACTCCACGGCCCTCA 62.989 66.667 0.00 0.00 37.61 3.86
1164 1219 2.329690 CGCCTCAGATCTCGGACG 59.670 66.667 11.01 9.72 0.00 4.79
1168 1223 1.299014 CTCAGATCTCGGACGCTGC 60.299 63.158 0.00 0.00 0.00 5.25
1169 1224 1.997928 CTCAGATCTCGGACGCTGCA 61.998 60.000 0.00 0.00 0.00 4.41
1185 1240 4.114997 CACCGCCCCAAACGCATC 62.115 66.667 0.00 0.00 0.00 3.91
1218 1273 2.760385 GCCCCTCGTCTAGGCAGT 60.760 66.667 0.00 0.00 46.34 4.40
1219 1274 1.455217 GCCCCTCGTCTAGGCAGTA 60.455 63.158 0.00 0.00 46.34 2.74
1220 1275 1.457009 GCCCCTCGTCTAGGCAGTAG 61.457 65.000 0.00 0.00 46.34 2.57
1221 1276 0.824182 CCCCTCGTCTAGGCAGTAGG 60.824 65.000 0.00 0.00 45.03 3.18
1222 1277 0.183014 CCCTCGTCTAGGCAGTAGGA 59.817 60.000 8.57 0.00 45.03 2.94
1223 1278 1.310904 CCTCGTCTAGGCAGTAGGAC 58.689 60.000 1.96 0.00 38.97 3.85
1224 1279 0.938713 CTCGTCTAGGCAGTAGGACG 59.061 60.000 7.83 7.83 35.41 4.79
1225 1280 0.463295 TCGTCTAGGCAGTAGGACGG 60.463 60.000 13.01 0.00 35.11 4.79
1226 1281 1.445716 CGTCTAGGCAGTAGGACGGG 61.446 65.000 0.00 0.00 32.83 5.28
1288 1443 1.212616 GAAGGATGGATCGCACTTCG 58.787 55.000 0.00 0.00 40.15 3.79
1289 1444 0.811616 AAGGATGGATCGCACTTCGC 60.812 55.000 0.00 0.00 38.27 4.70
1291 1446 1.638467 GATGGATCGCACTTCGCAC 59.362 57.895 0.00 0.00 42.60 5.34
1293 1448 1.086067 ATGGATCGCACTTCGCACTG 61.086 55.000 0.00 0.00 42.60 3.66
1294 1449 2.397252 GATCGCACTTCGCACTGC 59.603 61.111 0.00 0.00 42.60 4.40
1322 1477 3.278592 GACGCGGGTCGAGGAAACT 62.279 63.158 17.36 0.00 41.67 2.66
1325 1480 1.888736 GCGGGTCGAGGAAACTACT 59.111 57.895 0.00 0.00 44.43 2.57
1326 1481 0.245813 GCGGGTCGAGGAAACTACTT 59.754 55.000 0.00 0.00 44.43 2.24
1327 1482 1.735038 GCGGGTCGAGGAAACTACTTC 60.735 57.143 0.00 0.00 44.43 3.01
1328 1483 1.817447 CGGGTCGAGGAAACTACTTCT 59.183 52.381 0.00 0.00 44.43 2.85
1329 1484 2.230750 CGGGTCGAGGAAACTACTTCTT 59.769 50.000 0.00 0.00 44.43 2.52
1330 1485 3.305881 CGGGTCGAGGAAACTACTTCTTT 60.306 47.826 0.00 0.00 44.43 2.52
1331 1486 3.995048 GGGTCGAGGAAACTACTTCTTTG 59.005 47.826 0.00 0.00 44.43 2.77
1332 1487 4.502777 GGGTCGAGGAAACTACTTCTTTGT 60.503 45.833 0.00 0.00 44.43 2.83
1392 1547 5.083122 TCATTGGTCTGCCCTGAAAATTTA 58.917 37.500 0.00 0.00 0.00 1.40
1404 1559 2.744741 TGAAAATTTACGCCAGCATCGA 59.255 40.909 0.00 0.00 0.00 3.59
1405 1560 3.376859 TGAAAATTTACGCCAGCATCGAT 59.623 39.130 0.00 0.00 0.00 3.59
1436 1591 1.137086 CACCAGGAGAACGTATCCAGG 59.863 57.143 22.38 22.38 46.30 4.45
1437 1592 1.486211 CCAGGAGAACGTATCCAGGT 58.514 55.000 18.95 0.00 38.40 4.00
1438 1593 1.409427 CCAGGAGAACGTATCCAGGTC 59.591 57.143 18.95 0.00 38.40 3.85
1439 1594 1.409427 CAGGAGAACGTATCCAGGTCC 59.591 57.143 18.95 8.39 39.47 4.46
1440 1595 0.384669 GGAGAACGTATCCAGGTCCG 59.615 60.000 13.46 0.00 36.79 4.79
1441 1596 1.101331 GAGAACGTATCCAGGTCCGT 58.899 55.000 0.00 0.00 34.56 4.69
1442 1597 1.065251 GAGAACGTATCCAGGTCCGTC 59.935 57.143 0.00 0.00 32.30 4.79
1443 1598 0.101939 GAACGTATCCAGGTCCGTCC 59.898 60.000 0.00 0.00 32.30 4.79
1444 1599 1.660560 AACGTATCCAGGTCCGTCCG 61.661 60.000 0.00 0.00 41.99 4.79
1445 1600 1.820906 CGTATCCAGGTCCGTCCGA 60.821 63.158 0.00 0.00 41.99 4.55
1446 1601 1.378882 CGTATCCAGGTCCGTCCGAA 61.379 60.000 0.00 0.00 41.99 4.30
1447 1602 0.819582 GTATCCAGGTCCGTCCGAAA 59.180 55.000 0.00 0.00 41.99 3.46
1451 1606 1.205417 TCCAGGTCCGTCCGAAAATAC 59.795 52.381 0.00 0.00 41.99 1.89
1452 1607 1.206371 CCAGGTCCGTCCGAAAATACT 59.794 52.381 0.00 0.00 41.99 2.12
1453 1608 2.354403 CCAGGTCCGTCCGAAAATACTT 60.354 50.000 0.00 0.00 41.99 2.24
1458 1613 3.930848 GTCCGTCCGAAAATACTTGTCAT 59.069 43.478 0.00 0.00 0.00 3.06
1459 1614 4.032558 GTCCGTCCGAAAATACTTGTCATC 59.967 45.833 0.00 0.00 0.00 2.92
1460 1615 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
1461 1616 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
1462 1617 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
1463 1618 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
1464 1619 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
1465 1620 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
1466 1621 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
1467 1622 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
1468 1623 7.273381 CCGAAAATACTTGTCATCAAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
1469 1624 7.807433 CGAAAATACTTGTCATCAAAATGGACA 59.193 33.333 0.00 0.00 33.42 4.02
1470 1625 9.474920 GAAAATACTTGTCATCAAAATGGACAA 57.525 29.630 0.00 0.00 34.59 3.18
1472 1627 9.829507 AAATACTTGTCATCAAAATGGACAAAA 57.170 25.926 7.70 0.84 34.98 2.44
1473 1628 9.829507 AATACTTGTCATCAAAATGGACAAAAA 57.170 25.926 7.70 0.55 34.98 1.94
1523 1678 9.781425 ACATCTAGATACATCCCTTCTATTCAT 57.219 33.333 4.54 0.00 0.00 2.57
1531 1686 7.502120 ACATCCCTTCTATTCATTTTGATCG 57.498 36.000 0.00 0.00 0.00 3.69
1532 1687 7.282585 ACATCCCTTCTATTCATTTTGATCGA 58.717 34.615 0.00 0.00 0.00 3.59
1533 1688 7.941238 ACATCCCTTCTATTCATTTTGATCGAT 59.059 33.333 0.00 0.00 0.00 3.59
1534 1689 7.734924 TCCCTTCTATTCATTTTGATCGATG 57.265 36.000 0.54 0.00 0.00 3.84
1535 1690 7.508687 TCCCTTCTATTCATTTTGATCGATGA 58.491 34.615 0.54 0.00 0.00 2.92
1536 1691 7.442364 TCCCTTCTATTCATTTTGATCGATGAC 59.558 37.037 0.54 0.00 32.36 3.06
1537 1692 7.227314 CCCTTCTATTCATTTTGATCGATGACA 59.773 37.037 0.54 0.00 32.36 3.58
1538 1693 8.615211 CCTTCTATTCATTTTGATCGATGACAA 58.385 33.333 0.54 0.00 32.36 3.18
1539 1694 9.647679 CTTCTATTCATTTTGATCGATGACAAG 57.352 33.333 0.54 6.77 32.36 3.16
1540 1695 8.722480 TCTATTCATTTTGATCGATGACAAGT 57.278 30.769 0.54 0.00 32.36 3.16
1541 1696 9.816354 TCTATTCATTTTGATCGATGACAAGTA 57.184 29.630 0.54 0.00 32.36 2.24
1545 1700 9.773328 TTCATTTTGATCGATGACAAGTATTTC 57.227 29.630 0.54 0.00 32.36 2.17
1546 1701 8.397906 TCATTTTGATCGATGACAAGTATTTCC 58.602 33.333 0.54 0.00 0.00 3.13
1547 1702 5.966636 TTGATCGATGACAAGTATTTCCG 57.033 39.130 0.54 0.00 0.00 4.30
1548 1703 4.368315 TGATCGATGACAAGTATTTCCGG 58.632 43.478 0.54 0.00 0.00 5.14
1549 1704 4.098807 TGATCGATGACAAGTATTTCCGGA 59.901 41.667 0.54 0.00 0.00 5.14
1550 1705 3.777478 TCGATGACAAGTATTTCCGGAC 58.223 45.455 1.83 0.00 0.00 4.79
1551 1706 2.534349 CGATGACAAGTATTTCCGGACG 59.466 50.000 1.83 0.00 0.00 4.79
1552 1707 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
1553 1708 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
1554 1709 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
1555 1710 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1558 1713 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1568 1723 4.077822 CGGACGGAGGGAGTATATACTTT 58.922 47.826 16.46 6.10 36.50 2.66
1611 1808 6.864165 ACGTTTTGTTTGATTACAACTTGTGT 59.136 30.769 4.57 0.00 44.82 3.72
1620 1817 4.875544 TTACAACTTGTGTTCTGTCTGC 57.124 40.909 4.57 0.00 41.98 4.26
1635 1832 2.012673 GTCTGCCTGCCTACAAATCAG 58.987 52.381 0.00 0.00 0.00 2.90
1640 1837 2.372264 CCTGCCTACAAATCAGCATGT 58.628 47.619 0.00 0.00 37.40 3.21
1662 1859 1.609208 AGTTTCTGCAAGCCGTGATT 58.391 45.000 0.00 0.00 0.00 2.57
1667 1865 0.729116 CTGCAAGCCGTGATTGGTAG 59.271 55.000 4.48 0.00 28.93 3.18
1688 1886 2.922335 GCCAGAAATGCCGTTTTGAGTC 60.922 50.000 0.00 0.00 0.00 3.36
1703 1902 2.660572 TGAGTCTGACCTCTATGGCTC 58.339 52.381 3.76 0.00 40.22 4.70
1737 1948 0.670546 ACTTCGTGGATGTCTTGGCG 60.671 55.000 0.00 0.00 0.00 5.69
1771 1982 5.092554 TGGTCTGTTTGTCAGTTCAGTAA 57.907 39.130 0.00 0.00 43.97 2.24
1777 1988 7.640240 GTCTGTTTGTCAGTTCAGTAATTTGTC 59.360 37.037 0.00 0.00 43.97 3.18
1778 1989 7.335673 TCTGTTTGTCAGTTCAGTAATTTGTCA 59.664 33.333 0.00 0.00 43.97 3.58
1794 2005 4.476628 TTGTCATAGCTTGCTCTGATCA 57.523 40.909 12.58 10.05 0.00 2.92
1806 2017 3.511540 TGCTCTGATCATAGGGGTAATCG 59.488 47.826 9.88 0.00 0.00 3.34
1807 2018 3.511934 GCTCTGATCATAGGGGTAATCGT 59.488 47.826 9.88 0.00 0.00 3.73
1825 2221 3.605634 TCGTGGGGTACAATGATTTGAG 58.394 45.455 0.00 0.00 36.64 3.02
1834 2230 6.409234 GGGTACAATGATTTGAGTAGGATCCA 60.409 42.308 15.82 0.00 36.64 3.41
1835 2231 6.483640 GGTACAATGATTTGAGTAGGATCCAC 59.516 42.308 15.82 10.22 36.64 4.02
1855 2251 3.553917 CACGGTACAATGTTGCATCGATA 59.446 43.478 5.70 0.00 0.00 2.92
1859 2255 5.404066 CGGTACAATGTTGCATCGATACATA 59.596 40.000 11.67 0.10 32.51 2.29
1860 2256 6.590357 GGTACAATGTTGCATCGATACATAC 58.410 40.000 11.67 7.40 32.51 2.39
1864 2260 3.049912 TGTTGCATCGATACATACTCGC 58.950 45.455 0.00 0.00 36.11 5.03
1900 2296 2.901839 AGTTTCAGGCAAGCAATTGGAT 59.098 40.909 7.72 0.00 0.00 3.41
1906 2302 1.345415 GGCAAGCAATTGGATATGGGG 59.655 52.381 7.72 0.00 0.00 4.96
1936 2332 8.317679 CCTAGGATAGAGTCAATATCTTTTGGG 58.682 40.741 1.05 0.00 42.77 4.12
1941 2337 6.636454 AGAGTCAATATCTTTTGGGGTACA 57.364 37.500 0.00 0.00 0.00 2.90
1942 2338 7.027874 AGAGTCAATATCTTTTGGGGTACAA 57.972 36.000 0.00 0.00 37.28 2.41
1943 2339 7.643123 AGAGTCAATATCTTTTGGGGTACAAT 58.357 34.615 0.00 0.00 39.21 2.71
1944 2340 7.557719 AGAGTCAATATCTTTTGGGGTACAATG 59.442 37.037 0.00 0.00 39.21 2.82
1945 2341 7.410174 AGTCAATATCTTTTGGGGTACAATGA 58.590 34.615 0.00 0.00 39.21 2.57
1946 2342 8.061304 AGTCAATATCTTTTGGGGTACAATGAT 58.939 33.333 0.00 0.00 39.21 2.45
1947 2343 8.695456 GTCAATATCTTTTGGGGTACAATGATT 58.305 33.333 0.00 0.00 39.21 2.57
1948 2344 9.265862 TCAATATCTTTTGGGGTACAATGATTT 57.734 29.630 0.00 0.00 39.21 2.17
1959 2360 6.265577 GGGTACAATGATTTAAGTGATGTGC 58.734 40.000 0.00 0.00 0.00 4.57
1984 2388 5.179929 TGTCTTGTCTAAATGCATGTGACTG 59.820 40.000 20.24 15.16 0.00 3.51
2005 2410 1.032014 TTTGCTGCAACTTGACCTCC 58.968 50.000 15.72 0.00 0.00 4.30
2017 2422 1.342074 TGACCTCCGGATGATGGATC 58.658 55.000 14.21 8.10 34.32 3.36
2030 2435 6.453943 GGATGATGGATCGATGGATATGTAG 58.546 44.000 0.54 0.00 31.51 2.74
2074 2479 3.922240 CACACACTGAAATGCCTATTTGC 59.078 43.478 0.00 0.00 36.66 3.68
2086 2491 4.599041 TGCCTATTTGCTTGGTAAGTGAT 58.401 39.130 0.00 0.00 0.00 3.06
2095 2500 6.252967 TGCTTGGTAAGTGATAACATTGTG 57.747 37.500 0.00 0.00 29.37 3.33
2109 2515 1.538512 CATTGTGTCTGCAGTCCCTTG 59.461 52.381 14.67 2.51 0.00 3.61
2135 2541 7.227314 GGCACATTACAAGATGATCATGTCTTA 59.773 37.037 14.30 1.16 33.57 2.10
2141 2547 7.984422 ACAAGATGATCATGTCTTAACAACA 57.016 32.000 14.30 0.00 39.30 3.33
2192 2598 6.820335 AGATGCATCTAGTGTTAACAGCATA 58.180 36.000 27.73 11.13 41.07 3.14
2193 2599 7.275183 AGATGCATCTAGTGTTAACAGCATAA 58.725 34.615 27.73 5.67 41.07 1.90
2266 2680 3.397849 TGATGCAGCATATCTCAGGAC 57.602 47.619 8.22 0.00 0.00 3.85
2292 2706 3.411446 TCAGTTTCATAGGCACAACCAG 58.589 45.455 0.00 0.00 43.14 4.00
2298 2712 2.637382 TCATAGGCACAACCAGTCTTCA 59.363 45.455 0.00 0.00 43.14 3.02
2421 2840 0.473755 TCTTGAAGCTGGCCTGTTCA 59.526 50.000 17.45 17.45 0.00 3.18
2422 2841 0.879765 CTTGAAGCTGGCCTGTTCAG 59.120 55.000 19.20 13.44 32.00 3.02
2434 2853 2.351157 GCCTGTTCAGCTCATCAACAAC 60.351 50.000 0.00 0.00 29.78 3.32
2437 2856 4.285292 CTGTTCAGCTCATCAACAACAAC 58.715 43.478 0.00 0.00 29.78 3.32
2465 2884 3.138653 TGGTTTTGCCTACCTTCCAGTAA 59.861 43.478 0.00 0.00 36.60 2.24
2471 2890 5.099042 TGCCTACCTTCCAGTAAGAAATC 57.901 43.478 0.00 0.00 37.38 2.17
2472 2891 4.534500 TGCCTACCTTCCAGTAAGAAATCA 59.466 41.667 0.00 0.00 37.38 2.57
2473 2892 5.013704 TGCCTACCTTCCAGTAAGAAATCAA 59.986 40.000 0.00 0.00 37.38 2.57
2474 2893 5.944007 GCCTACCTTCCAGTAAGAAATCAAA 59.056 40.000 0.00 0.00 37.38 2.69
2475 2894 6.603599 GCCTACCTTCCAGTAAGAAATCAAAT 59.396 38.462 0.00 0.00 37.38 2.32
2476 2895 7.122799 GCCTACCTTCCAGTAAGAAATCAAATT 59.877 37.037 0.00 0.00 37.38 1.82
2477 2896 9.681062 CCTACCTTCCAGTAAGAAATCAAATTA 57.319 33.333 0.00 0.00 37.38 1.40
2480 2899 8.470002 ACCTTCCAGTAAGAAATCAAATTATGC 58.530 33.333 0.00 0.00 37.38 3.14
2543 2963 7.721399 ACATTGAATTTGAGAAGAACACTAGGT 59.279 33.333 0.00 0.00 0.00 3.08
2556 2976 7.559590 AGAACACTAGGTTAATTCATCATGC 57.440 36.000 0.00 0.00 40.63 4.06
2562 2982 7.879677 CACTAGGTTAATTCATCATGCCTGATA 59.120 37.037 4.01 0.00 40.20 2.15
2616 3037 8.730680 GGATTGTTCAGTAGTTCATGTAAATGT 58.269 33.333 0.00 0.00 0.00 2.71
2651 3072 5.051891 AGATGAAAGGCTGAAATTTGTCG 57.948 39.130 0.00 0.00 0.00 4.35
2733 3154 2.054799 GGGGATGGGTGTCTTATGCTA 58.945 52.381 0.00 0.00 0.00 3.49
2748 3169 5.414454 TCTTATGCTAATTTTGAGCGGTTGT 59.586 36.000 0.00 0.00 43.19 3.32
2749 3170 6.596106 TCTTATGCTAATTTTGAGCGGTTGTA 59.404 34.615 0.00 0.00 43.19 2.41
2796 3218 6.919775 TTCTTCTCTGAGGTAAAGCTTAGT 57.080 37.500 0.00 0.00 0.00 2.24
2843 3265 1.131126 GTCTTTCACATGTCATGGGCG 59.869 52.381 17.08 5.44 32.41 6.13
2889 3311 4.074970 TGAGCTTCAAGATTGAGGTTTCC 58.925 43.478 6.56 0.00 38.61 3.13
2899 3321 6.065976 AGATTGAGGTTTCCATACATGTGA 57.934 37.500 9.11 0.00 0.00 3.58
2910 3332 9.638239 GTTTCCATACATGTGATGTTTGTTAAT 57.362 29.630 9.11 0.00 41.63 1.40
2962 3384 1.895131 GCATGATTCTGGTTGGGTTGT 59.105 47.619 0.00 0.00 0.00 3.32
2963 3385 3.088532 GCATGATTCTGGTTGGGTTGTA 58.911 45.455 0.00 0.00 0.00 2.41
2964 3386 3.129287 GCATGATTCTGGTTGGGTTGTAG 59.871 47.826 0.00 0.00 0.00 2.74
2965 3387 4.335416 CATGATTCTGGTTGGGTTGTAGT 58.665 43.478 0.00 0.00 0.00 2.73
2966 3388 4.015872 TGATTCTGGTTGGGTTGTAGTC 57.984 45.455 0.00 0.00 0.00 2.59
2967 3389 3.650942 TGATTCTGGTTGGGTTGTAGTCT 59.349 43.478 0.00 0.00 0.00 3.24
2968 3390 4.104102 TGATTCTGGTTGGGTTGTAGTCTT 59.896 41.667 0.00 0.00 0.00 3.01
2969 3391 3.485463 TCTGGTTGGGTTGTAGTCTTG 57.515 47.619 0.00 0.00 0.00 3.02
2970 3392 2.775384 TCTGGTTGGGTTGTAGTCTTGT 59.225 45.455 0.00 0.00 0.00 3.16
2997 3419 8.028354 AGATAAGCATCTGATCTCTAAATCACG 58.972 37.037 0.00 0.00 40.15 4.35
3019 3441 3.821748 ACTTTTCCAGGTGAAAGGTCTC 58.178 45.455 17.10 0.00 46.79 3.36
3133 3555 2.728817 CCATCGGGCTAGTCGTCC 59.271 66.667 7.33 0.00 0.00 4.79
3138 3560 2.799371 GGGCTAGTCGTCCGTCTG 59.201 66.667 0.00 0.00 0.00 3.51
3139 3561 2.045131 GGGCTAGTCGTCCGTCTGT 61.045 63.158 0.00 0.00 0.00 3.41
3140 3562 1.136984 GGCTAGTCGTCCGTCTGTG 59.863 63.158 0.00 0.00 0.00 3.66
3141 3563 1.136984 GCTAGTCGTCCGTCTGTGG 59.863 63.158 0.00 0.00 0.00 4.17
3142 3564 1.303799 GCTAGTCGTCCGTCTGTGGA 61.304 60.000 0.00 0.00 35.04 4.02
3201 3623 3.084039 GGCTTGACAAGTGGATGATTCA 58.916 45.455 16.39 0.00 0.00 2.57
3206 3628 6.713762 TTGACAAGTGGATGATTCAAAGTT 57.286 33.333 0.00 0.00 0.00 2.66
3282 3704 5.136250 CTGTGACTGACAGCGAAATAATC 57.864 43.478 1.25 0.00 45.72 1.75
3287 3709 4.372656 ACTGACAGCGAAATAATCTAGCC 58.627 43.478 1.25 0.00 0.00 3.93
3290 3712 5.368145 TGACAGCGAAATAATCTAGCCAAT 58.632 37.500 0.00 0.00 0.00 3.16
3298 3720 7.918562 GCGAAATAATCTAGCCAATGGTTTTTA 59.081 33.333 0.00 0.00 0.00 1.52
3308 3730 7.637631 AGCCAATGGTTTTTATTTTGTTGTT 57.362 28.000 0.00 0.00 0.00 2.83
3376 3800 4.143543 TCAGATCTTTGCACACCATTTCA 58.856 39.130 0.00 0.00 0.00 2.69
3387 3811 2.760092 ACACCATTTCACACTTGCTGTT 59.240 40.909 0.00 0.00 0.00 3.16
3388 3812 3.195396 ACACCATTTCACACTTGCTGTTT 59.805 39.130 0.00 0.00 0.00 2.83
3389 3813 3.552699 CACCATTTCACACTTGCTGTTTG 59.447 43.478 0.00 0.00 0.00 2.93
3393 3877 5.122082 CCATTTCACACTTGCTGTTTGTTTT 59.878 36.000 0.00 0.00 0.00 2.43
3403 3887 6.697019 ACTTGCTGTTTGTTTTACTAGCAATG 59.303 34.615 9.52 7.12 46.22 2.82
3404 3888 6.142818 TGCTGTTTGTTTTACTAGCAATGT 57.857 33.333 0.00 0.00 38.12 2.71
3405 3889 7.265647 TGCTGTTTGTTTTACTAGCAATGTA 57.734 32.000 0.00 0.00 38.12 2.29
3406 3890 7.359595 TGCTGTTTGTTTTACTAGCAATGTAG 58.640 34.615 0.00 0.00 38.12 2.74
3407 3891 7.012894 TGCTGTTTGTTTTACTAGCAATGTAGT 59.987 33.333 0.00 2.24 38.12 2.73
3408 3892 8.500773 GCTGTTTGTTTTACTAGCAATGTAGTA 58.499 33.333 0.00 0.00 34.91 1.82
3409 3893 9.807386 CTGTTTGTTTTACTAGCAATGTAGTAC 57.193 33.333 0.00 0.00 35.63 2.73
3410 3894 9.550406 TGTTTGTTTTACTAGCAATGTAGTACT 57.450 29.630 0.00 0.00 35.63 2.73
3412 3896 8.767478 TTGTTTTACTAGCAATGTAGTACTCC 57.233 34.615 0.00 0.00 35.63 3.85
3413 3897 7.325694 TGTTTTACTAGCAATGTAGTACTCCC 58.674 38.462 0.00 0.00 35.63 4.30
3414 3898 7.179694 TGTTTTACTAGCAATGTAGTACTCCCT 59.820 37.037 0.00 0.00 35.63 4.20
3415 3899 6.956202 TTACTAGCAATGTAGTACTCCCTC 57.044 41.667 0.00 0.00 35.63 4.30
3416 3900 4.216708 ACTAGCAATGTAGTACTCCCTCC 58.783 47.826 0.00 0.00 31.14 4.30
3417 3901 2.032620 AGCAATGTAGTACTCCCTCCG 58.967 52.381 0.00 0.00 0.00 4.63
3418 3902 1.755380 GCAATGTAGTACTCCCTCCGT 59.245 52.381 0.00 0.00 0.00 4.69
3419 3903 2.223758 GCAATGTAGTACTCCCTCCGTC 60.224 54.545 0.00 0.00 0.00 4.79
3420 3904 3.288964 CAATGTAGTACTCCCTCCGTCT 58.711 50.000 0.00 0.00 0.00 4.18
3421 3905 2.414994 TGTAGTACTCCCTCCGTCTG 57.585 55.000 0.00 0.00 0.00 3.51
3422 3906 1.064906 TGTAGTACTCCCTCCGTCTGG 60.065 57.143 0.00 0.00 0.00 3.86
3423 3907 1.211457 GTAGTACTCCCTCCGTCTGGA 59.789 57.143 0.00 0.00 43.88 3.86
3424 3908 0.702902 AGTACTCCCTCCGTCTGGAA 59.297 55.000 0.00 0.00 45.87 3.53
3425 3909 1.288335 AGTACTCCCTCCGTCTGGAAT 59.712 52.381 0.00 0.00 45.87 3.01
3426 3910 2.108970 GTACTCCCTCCGTCTGGAATT 58.891 52.381 0.00 0.00 45.87 2.17
3427 3911 2.544844 ACTCCCTCCGTCTGGAATTA 57.455 50.000 0.00 0.00 45.87 1.40
3428 3912 2.108970 ACTCCCTCCGTCTGGAATTAC 58.891 52.381 0.00 0.00 45.87 1.89
3429 3913 2.292323 ACTCCCTCCGTCTGGAATTACT 60.292 50.000 0.00 0.00 45.87 2.24
3430 3914 2.766828 CTCCCTCCGTCTGGAATTACTT 59.233 50.000 0.00 0.00 45.87 2.24
3431 3915 2.500098 TCCCTCCGTCTGGAATTACTTG 59.500 50.000 0.00 0.00 45.87 3.16
3432 3916 2.236395 CCCTCCGTCTGGAATTACTTGT 59.764 50.000 0.00 0.00 45.87 3.16
3433 3917 3.522553 CCTCCGTCTGGAATTACTTGTC 58.477 50.000 0.00 0.00 45.87 3.18
3434 3918 3.056107 CCTCCGTCTGGAATTACTTGTCA 60.056 47.826 0.00 0.00 45.87 3.58
3435 3919 3.921677 TCCGTCTGGAATTACTTGTCAC 58.078 45.455 0.00 0.00 42.85 3.67
3436 3920 2.666508 CCGTCTGGAATTACTTGTCACG 59.333 50.000 0.00 0.00 37.49 4.35
3437 3921 3.571571 CGTCTGGAATTACTTGTCACGA 58.428 45.455 0.00 0.00 0.00 4.35
3438 3922 3.985279 CGTCTGGAATTACTTGTCACGAA 59.015 43.478 0.00 0.00 0.00 3.85
3439 3923 4.446385 CGTCTGGAATTACTTGTCACGAAA 59.554 41.667 0.00 0.00 0.00 3.46
3440 3924 5.050634 CGTCTGGAATTACTTGTCACGAAAA 60.051 40.000 0.00 0.00 0.00 2.29
3441 3925 6.347402 CGTCTGGAATTACTTGTCACGAAAAT 60.347 38.462 0.00 0.00 0.00 1.82
3442 3926 6.797033 GTCTGGAATTACTTGTCACGAAAATG 59.203 38.462 0.00 0.00 0.00 2.32
3443 3927 6.708502 TCTGGAATTACTTGTCACGAAAATGA 59.291 34.615 0.00 0.00 0.00 2.57
3444 3928 7.227711 TCTGGAATTACTTGTCACGAAAATGAA 59.772 33.333 0.00 0.00 0.00 2.57
3445 3929 7.881142 TGGAATTACTTGTCACGAAAATGAAT 58.119 30.769 0.00 0.00 0.00 2.57
3446 3930 7.807433 TGGAATTACTTGTCACGAAAATGAATG 59.193 33.333 0.00 0.00 0.00 2.67
3447 3931 7.273381 GGAATTACTTGTCACGAAAATGAATGG 59.727 37.037 0.00 0.00 0.00 3.16
3448 3932 6.869315 TTACTTGTCACGAAAATGAATGGA 57.131 33.333 0.00 0.00 0.00 3.41
3449 3933 5.766150 ACTTGTCACGAAAATGAATGGAA 57.234 34.783 0.00 0.00 0.00 3.53
3450 3934 6.142818 ACTTGTCACGAAAATGAATGGAAA 57.857 33.333 0.00 0.00 0.00 3.13
3451 3935 6.748132 ACTTGTCACGAAAATGAATGGAAAT 58.252 32.000 0.00 0.00 0.00 2.17
3452 3936 6.642131 ACTTGTCACGAAAATGAATGGAAATG 59.358 34.615 0.00 0.00 0.00 2.32
3453 3937 5.468592 TGTCACGAAAATGAATGGAAATGG 58.531 37.500 0.00 0.00 0.00 3.16
3454 3938 5.242615 TGTCACGAAAATGAATGGAAATGGA 59.757 36.000 0.00 0.00 0.00 3.41
3455 3939 6.071447 TGTCACGAAAATGAATGGAAATGGAT 60.071 34.615 0.00 0.00 0.00 3.41
3456 3940 6.254157 GTCACGAAAATGAATGGAAATGGATG 59.746 38.462 0.00 0.00 0.00 3.51
3457 3941 6.071447 TCACGAAAATGAATGGAAATGGATGT 60.071 34.615 0.00 0.00 0.00 3.06
3458 3942 7.121907 TCACGAAAATGAATGGAAATGGATGTA 59.878 33.333 0.00 0.00 0.00 2.29
3459 3943 7.922278 CACGAAAATGAATGGAAATGGATGTAT 59.078 33.333 0.00 0.00 0.00 2.29
3460 3944 8.137437 ACGAAAATGAATGGAAATGGATGTATC 58.863 33.333 0.00 0.00 0.00 2.24
3461 3945 8.355169 CGAAAATGAATGGAAATGGATGTATCT 58.645 33.333 0.00 0.00 0.00 1.98
3466 3950 8.908786 TGAATGGAAATGGATGTATCTAGAAC 57.091 34.615 0.00 0.00 0.00 3.01
3467 3951 8.717717 TGAATGGAAATGGATGTATCTAGAACT 58.282 33.333 0.00 0.00 0.00 3.01
3497 3981 6.425210 TGTCTAGATACATCCATTTCTGGG 57.575 41.667 0.00 0.00 43.34 4.45
3498 3982 6.143206 TGTCTAGATACATCCATTTCTGGGA 58.857 40.000 0.00 0.00 43.34 4.37
3499 3983 6.042093 TGTCTAGATACATCCATTTCTGGGAC 59.958 42.308 0.00 0.00 43.34 4.46
3500 3984 6.042093 GTCTAGATACATCCATTTCTGGGACA 59.958 42.308 0.00 0.00 43.34 4.02
3501 3985 5.715439 AGATACATCCATTTCTGGGACAA 57.285 39.130 0.00 0.00 43.34 3.18
3502 3986 5.688807 AGATACATCCATTTCTGGGACAAG 58.311 41.667 0.00 0.00 43.34 3.16
3503 3987 3.814504 ACATCCATTTCTGGGACAAGT 57.185 42.857 0.00 0.00 43.34 3.16
3504 3988 4.927267 ACATCCATTTCTGGGACAAGTA 57.073 40.909 0.00 0.00 43.34 2.24
3505 3989 5.456921 ACATCCATTTCTGGGACAAGTAT 57.543 39.130 0.00 0.00 43.34 2.12
3506 3990 5.831103 ACATCCATTTCTGGGACAAGTATT 58.169 37.500 0.00 0.00 43.34 1.89
3507 3991 6.256053 ACATCCATTTCTGGGACAAGTATTT 58.744 36.000 0.00 0.00 43.34 1.40
3508 3992 6.378280 ACATCCATTTCTGGGACAAGTATTTC 59.622 38.462 0.00 0.00 43.34 2.17
3509 3993 5.261216 TCCATTTCTGGGACAAGTATTTCC 58.739 41.667 0.00 0.00 43.34 3.13
3510 3994 4.096382 CCATTTCTGGGACAAGTATTTCCG 59.904 45.833 0.00 0.00 38.70 4.30
3511 3995 3.343941 TTCTGGGACAAGTATTTCCGG 57.656 47.619 0.00 0.00 38.70 5.14
3512 3996 2.542550 TCTGGGACAAGTATTTCCGGA 58.457 47.619 0.00 0.00 38.70 5.14
3513 3997 2.235402 TCTGGGACAAGTATTTCCGGAC 59.765 50.000 1.83 0.00 38.70 4.79
3514 3998 1.066716 TGGGACAAGTATTTCCGGACG 60.067 52.381 1.83 0.00 31.92 4.79
3515 3999 1.648504 GGACAAGTATTTCCGGACGG 58.351 55.000 1.83 3.96 0.00 4.79
3516 4000 1.205417 GGACAAGTATTTCCGGACGGA 59.795 52.381 1.83 9.76 43.52 4.69
3517 4001 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
3518 4002 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3519 4003 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3520 4004 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3521 4005 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3551 4037 2.642139 ATGATGCCTGTTTTTCGCTG 57.358 45.000 0.00 0.00 0.00 5.18
3564 4050 5.049680 TGTTTTTCGCTGGTTTGATAGTCTC 60.050 40.000 0.00 0.00 0.00 3.36
3565 4051 4.537135 TTTCGCTGGTTTGATAGTCTCT 57.463 40.909 0.00 0.00 0.00 3.10
3576 4062 4.933505 TGATAGTCTCTGCTGATGAAGG 57.066 45.455 0.00 0.00 0.00 3.46
3582 4068 4.018597 AGTCTCTGCTGATGAAGGGAAAAT 60.019 41.667 0.00 0.00 28.08 1.82
3586 4072 4.641989 TCTGCTGATGAAGGGAAAATTAGC 59.358 41.667 0.00 0.00 34.48 3.09
3588 4074 3.793465 GCTGATGAAGGGAAAATTAGCGC 60.793 47.826 0.00 0.00 0.00 5.92
3592 4081 2.092323 GAAGGGAAAATTAGCGCTGGT 58.908 47.619 22.90 5.17 0.00 4.00
3595 4084 1.135112 GGGAAAATTAGCGCTGGTTGG 60.135 52.381 22.90 0.00 0.00 3.77
3616 4105 3.574614 GTCCATGCTTGCACGTTTTATT 58.425 40.909 0.00 0.00 0.00 1.40
3618 4107 3.005261 TCCATGCTTGCACGTTTTATTGT 59.995 39.130 0.00 0.00 0.00 2.71
3620 4109 2.736978 TGCTTGCACGTTTTATTGTGG 58.263 42.857 0.00 0.00 36.61 4.17
3625 4114 4.481930 TGCACGTTTTATTGTGGAGAAG 57.518 40.909 0.00 0.00 36.61 2.85
3626 4115 4.130857 TGCACGTTTTATTGTGGAGAAGA 58.869 39.130 0.00 0.00 36.61 2.87
3627 4116 4.576873 TGCACGTTTTATTGTGGAGAAGAA 59.423 37.500 0.00 0.00 36.61 2.52
3628 4117 5.066634 TGCACGTTTTATTGTGGAGAAGAAA 59.933 36.000 0.00 0.00 36.61 2.52
3670 4160 2.351726 GCGTTGGTAGTATCTGCAAAGG 59.648 50.000 0.00 0.00 0.00 3.11
3702 4192 1.537202 GCTCAACATCACCTTGTCCAC 59.463 52.381 0.00 0.00 0.00 4.02
3753 4250 1.216710 CCTCTTGCCGACCTCTGTC 59.783 63.158 0.00 0.00 38.18 3.51
3754 4251 1.254284 CCTCTTGCCGACCTCTGTCT 61.254 60.000 0.00 0.00 39.47 3.41
3755 4252 0.108898 CTCTTGCCGACCTCTGTCTG 60.109 60.000 0.00 0.00 39.47 3.51
3758 4258 0.468226 TTGCCGACCTCTGTCTGTTT 59.532 50.000 0.00 0.00 39.47 2.83
3830 4334 1.386533 GGTTCAGGCCTGTGATGATG 58.613 55.000 31.58 5.23 0.00 3.07
3917 4421 9.829507 ATCTTGATCTTGGACTGTTCTAATTAG 57.170 33.333 6.11 6.11 0.00 1.73
3918 4422 8.816894 TCTTGATCTTGGACTGTTCTAATTAGT 58.183 33.333 12.19 0.00 0.00 2.24
3919 4423 9.442047 CTTGATCTTGGACTGTTCTAATTAGTT 57.558 33.333 12.19 0.00 0.00 2.24
3970 4480 5.643777 GCCATTATCAGCTATCGTTATTGGT 59.356 40.000 0.00 0.00 0.00 3.67
3972 4482 7.521529 CCATTATCAGCTATCGTTATTGGTTG 58.478 38.462 0.00 0.00 0.00 3.77
3985 4495 2.036256 GGTTGCCCACCATCTGCT 59.964 61.111 0.00 0.00 46.42 4.24
4014 4524 6.541641 GCAGAAGAAGATGATCATTAACTGGT 59.458 38.462 10.14 0.00 0.00 4.00
4040 4550 5.391312 AGCATTGTTTCCACCACTATTTC 57.609 39.130 0.00 0.00 0.00 2.17
4053 4563 6.828273 CCACCACTATTTCTTCCATGTATGAA 59.172 38.462 0.00 0.00 0.00 2.57
4054 4564 7.339212 CCACCACTATTTCTTCCATGTATGAAA 59.661 37.037 2.50 2.50 33.74 2.69
4091 4606 3.182572 GTCAGCGCAACAGCATAGTATAC 59.817 47.826 11.47 0.00 40.15 1.47
4117 4632 4.202243 ACACAAAAATGACCCTCAACCATG 60.202 41.667 0.00 0.00 0.00 3.66
4118 4633 3.244181 ACAAAAATGACCCTCAACCATGC 60.244 43.478 0.00 0.00 0.00 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
198 199 2.595238 GGTCATCTACTACGACCCCAT 58.405 52.381 0.00 0.00 42.87 4.00
490 491 3.670629 CTCCGCTCCTCACCCTCCT 62.671 68.421 0.00 0.00 0.00 3.69
491 492 3.151022 CTCCGCTCCTCACCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
492 493 3.844090 GCTCCGCTCCTCACCCTC 61.844 72.222 0.00 0.00 0.00 4.30
520 521 2.361992 TCCTACTCAGCGGGCGAA 60.362 61.111 0.00 0.00 0.00 4.70
525 526 3.528370 CCCCGTCCTACTCAGCGG 61.528 72.222 0.00 0.00 43.40 5.52
533 534 2.957902 ATTCCCGCATCCCCGTCCTA 62.958 60.000 0.00 0.00 0.00 2.94
752 766 1.153086 GGATGAGGTTGCTGCCGAT 60.153 57.895 0.00 0.00 0.00 4.18
756 770 0.106819 ATGGAGGATGAGGTTGCTGC 60.107 55.000 0.00 0.00 0.00 5.25
758 772 1.213926 GGAATGGAGGATGAGGTTGCT 59.786 52.381 0.00 0.00 0.00 3.91
759 773 1.685148 GGAATGGAGGATGAGGTTGC 58.315 55.000 0.00 0.00 0.00 4.17
761 775 0.839946 CGGGAATGGAGGATGAGGTT 59.160 55.000 0.00 0.00 0.00 3.50
762 776 1.700042 GCGGGAATGGAGGATGAGGT 61.700 60.000 0.00 0.00 0.00 3.85
764 778 1.342074 TAGCGGGAATGGAGGATGAG 58.658 55.000 0.00 0.00 0.00 2.90
766 780 2.304180 AGAATAGCGGGAATGGAGGATG 59.696 50.000 0.00 0.00 0.00 3.51
767 781 2.304180 CAGAATAGCGGGAATGGAGGAT 59.696 50.000 0.00 0.00 0.00 3.24
768 782 1.694150 CAGAATAGCGGGAATGGAGGA 59.306 52.381 0.00 0.00 0.00 3.71
769 783 1.271054 CCAGAATAGCGGGAATGGAGG 60.271 57.143 0.00 0.00 33.08 4.30
770 784 1.417890 ACCAGAATAGCGGGAATGGAG 59.582 52.381 7.22 0.00 35.60 3.86
771 785 1.140852 CACCAGAATAGCGGGAATGGA 59.859 52.381 7.22 0.00 35.60 3.41
772 786 1.140852 TCACCAGAATAGCGGGAATGG 59.859 52.381 0.00 0.00 35.60 3.16
773 787 2.614057 GTTCACCAGAATAGCGGGAATG 59.386 50.000 0.00 0.00 35.92 2.67
774 788 2.421529 GGTTCACCAGAATAGCGGGAAT 60.422 50.000 0.00 0.00 35.92 3.01
775 789 1.065709 GGTTCACCAGAATAGCGGGAA 60.066 52.381 0.00 0.00 35.92 3.97
776 790 0.539986 GGTTCACCAGAATAGCGGGA 59.460 55.000 0.00 0.00 35.92 5.14
777 791 0.251916 TGGTTCACCAGAATAGCGGG 59.748 55.000 0.00 0.00 42.01 6.13
778 792 3.853104 TGGTTCACCAGAATAGCGG 57.147 52.632 0.00 0.00 42.01 5.52
811 825 0.803117 CTGGTCTACGTCTTCGCTGA 59.197 55.000 0.00 0.00 41.18 4.26
812 826 0.798771 GCTGGTCTACGTCTTCGCTG 60.799 60.000 0.00 0.00 41.18 5.18
813 827 1.507174 GCTGGTCTACGTCTTCGCT 59.493 57.895 0.00 0.00 41.18 4.93
814 828 1.516603 GGCTGGTCTACGTCTTCGC 60.517 63.158 0.00 0.00 41.18 4.70
815 829 1.139095 GGGCTGGTCTACGTCTTCG 59.861 63.158 0.00 0.00 43.34 3.79
816 830 0.173708 CTGGGCTGGTCTACGTCTTC 59.826 60.000 0.00 0.00 0.00 2.87
817 831 1.258445 CCTGGGCTGGTCTACGTCTT 61.258 60.000 0.00 0.00 0.00 3.01
819 833 2.893398 CCTGGGCTGGTCTACGTC 59.107 66.667 0.00 0.00 0.00 4.34
820 834 3.391382 GCCTGGGCTGGTCTACGT 61.391 66.667 4.12 0.00 38.26 3.57
837 851 2.478335 TTTACTGGGCCAGGCGGAAG 62.478 60.000 35.34 11.84 35.51 3.46
838 852 2.478335 CTTTACTGGGCCAGGCGGAA 62.478 60.000 35.34 20.67 35.51 4.30
839 853 2.931105 TTTACTGGGCCAGGCGGA 60.931 61.111 35.34 16.58 35.51 5.54
840 854 2.438434 CTTTACTGGGCCAGGCGG 60.438 66.667 35.34 18.80 35.51 6.13
841 855 1.745489 GACTTTACTGGGCCAGGCG 60.745 63.158 35.34 21.84 35.51 5.52
853 867 0.388134 GTCAGTGGCGCTCGACTTTA 60.388 55.000 7.64 0.00 0.00 1.85
856 870 2.640302 ATGTCAGTGGCGCTCGACT 61.640 57.895 22.14 4.23 0.00 4.18
864 878 3.127533 GTCCCGCATGTCAGTGGC 61.128 66.667 0.00 0.00 37.85 5.01
866 880 0.179100 CTAGGTCCCGCATGTCAGTG 60.179 60.000 0.00 0.00 0.00 3.66
872 886 2.076622 CTCGACCTAGGTCCCGCATG 62.077 65.000 31.78 18.74 41.76 4.06
908 934 4.547905 TCGATTCGGGCTCGCGTC 62.548 66.667 0.00 0.00 36.11 5.19
925 956 0.960861 TCTGATCCGACTGCGACTGT 60.961 55.000 0.00 0.00 40.82 3.55
927 958 0.393132 TCTCTGATCCGACTGCGACT 60.393 55.000 0.00 0.00 40.82 4.18
939 970 2.790791 CCTTCCGCCGCTCTCTGAT 61.791 63.158 0.00 0.00 0.00 2.90
940 971 3.452786 CCTTCCGCCGCTCTCTGA 61.453 66.667 0.00 0.00 0.00 3.27
965 1004 2.560172 CTTTGCTTCTGCTCGCTCGC 62.560 60.000 0.00 0.00 40.48 5.03
967 1006 0.671781 TCCTTTGCTTCTGCTCGCTC 60.672 55.000 0.00 0.00 40.48 5.03
969 1008 1.642952 CCTCCTTTGCTTCTGCTCGC 61.643 60.000 0.00 0.00 40.48 5.03
970 1009 1.642952 GCCTCCTTTGCTTCTGCTCG 61.643 60.000 0.00 0.00 40.48 5.03
975 1014 1.298014 CTCCGCCTCCTTTGCTTCT 59.702 57.895 0.00 0.00 0.00 2.85
976 1015 1.746991 CCTCCGCCTCCTTTGCTTC 60.747 63.158 0.00 0.00 0.00 3.86
984 1023 4.565850 ATCTCCCCCTCCGCCTCC 62.566 72.222 0.00 0.00 0.00 4.30
986 1025 4.888325 CCATCTCCCCCTCCGCCT 62.888 72.222 0.00 0.00 0.00 5.52
989 1028 4.499116 ACCCCATCTCCCCCTCCG 62.499 72.222 0.00 0.00 0.00 4.63
990 1029 2.044620 AACCCCATCTCCCCCTCC 59.955 66.667 0.00 0.00 0.00 4.30
995 1034 0.466922 CAGCATGAACCCCATCTCCC 60.467 60.000 0.00 0.00 39.69 4.30
1062 1105 4.148825 AGGAAGTAGCTGCCGCCG 62.149 66.667 0.00 0.00 33.44 6.46
1145 1200 2.519541 TCCGAGATCTGAGGCGGG 60.520 66.667 17.68 2.84 43.71 6.13
1146 1201 2.725008 GTCCGAGATCTGAGGCGG 59.275 66.667 13.07 13.07 44.83 6.13
1149 1204 1.358402 CAGCGTCCGAGATCTGAGG 59.642 63.158 0.00 3.40 0.00 3.86
1168 1223 4.114997 GATGCGTTTGGGGCGGTG 62.115 66.667 0.00 0.00 0.00 4.94
1200 1255 3.905678 CTGCCTAGACGAGGGGCG 61.906 72.222 3.58 0.00 46.81 6.13
1201 1256 1.455217 TACTGCCTAGACGAGGGGC 60.455 63.158 3.58 0.00 46.81 5.80
1202 1257 0.824182 CCTACTGCCTAGACGAGGGG 60.824 65.000 3.58 0.00 46.81 4.79
1203 1258 0.183014 TCCTACTGCCTAGACGAGGG 59.817 60.000 3.58 0.00 46.81 4.30
1205 1260 0.938713 CGTCCTACTGCCTAGACGAG 59.061 60.000 5.52 0.00 38.16 4.18
1206 1261 0.463295 CCGTCCTACTGCCTAGACGA 60.463 60.000 12.52 0.00 38.16 4.20
1207 1262 1.445716 CCCGTCCTACTGCCTAGACG 61.446 65.000 4.51 4.51 36.04 4.18
1209 1264 1.229359 CCCCGTCCTACTGCCTAGA 59.771 63.158 0.00 0.00 0.00 2.43
1210 1265 1.833049 CCCCCGTCCTACTGCCTAG 60.833 68.421 0.00 0.00 0.00 3.02
1211 1266 2.281091 CCCCCGTCCTACTGCCTA 59.719 66.667 0.00 0.00 0.00 3.93
1252 1307 0.109272 TTCACAGAGGACGACGCATC 60.109 55.000 0.00 0.00 0.00 3.91
1253 1308 0.109086 CTTCACAGAGGACGACGCAT 60.109 55.000 0.00 0.00 0.00 4.73
1254 1309 1.285950 CTTCACAGAGGACGACGCA 59.714 57.895 0.00 0.00 0.00 5.24
1256 1311 2.254471 TCCTTCACAGAGGACGACG 58.746 57.895 0.00 0.00 40.87 5.12
1263 1318 1.137675 TGCGATCCATCCTTCACAGAG 59.862 52.381 0.00 0.00 0.00 3.35
1288 1443 0.445436 CGTCAGGAAATCAGCAGTGC 59.555 55.000 7.13 7.13 0.00 4.40
1289 1444 0.445436 GCGTCAGGAAATCAGCAGTG 59.555 55.000 0.00 0.00 0.00 3.66
1291 1446 1.699656 CCGCGTCAGGAAATCAGCAG 61.700 60.000 4.92 0.00 0.00 4.24
1293 1448 2.464459 CCCGCGTCAGGAAATCAGC 61.464 63.158 4.92 0.00 0.00 4.26
1294 1449 1.079127 ACCCGCGTCAGGAAATCAG 60.079 57.895 4.92 0.00 0.00 2.90
1392 1547 1.522355 CCAAGATCGATGCTGGCGT 60.522 57.895 0.54 0.00 0.00 5.68
1404 1559 2.053244 CTCCTGGTGCCTATCCAAGAT 58.947 52.381 0.00 0.00 34.35 2.40
1405 1560 1.008327 TCTCCTGGTGCCTATCCAAGA 59.992 52.381 0.00 0.00 34.35 3.02
1436 1591 3.319755 TGACAAGTATTTTCGGACGGAC 58.680 45.455 0.00 0.00 0.00 4.79
1437 1592 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
1438 1593 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
1439 1594 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
1440 1595 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
1441 1596 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
1442 1597 7.273381 GTCCATTTTGATGACAAGTATTTTCGG 59.727 37.037 0.00 0.00 37.32 4.30
1443 1598 7.807433 TGTCCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
1444 1599 9.474920 TTGTCCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
1445 1600 9.829507 TTTGTCCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.13 1.82
1446 1601 9.829507 TTTTGTCCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.13 1.40
1447 1602 9.829507 TTTTTGTCCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.13 1.89
1497 1652 9.781425 ATGAATAGAAGGGATGTATCTAGATGT 57.219 33.333 15.79 1.25 0.00 3.06
1505 1660 9.224267 CGATCAAAATGAATAGAAGGGATGTAT 57.776 33.333 0.00 0.00 0.00 2.29
1506 1661 8.428852 TCGATCAAAATGAATAGAAGGGATGTA 58.571 33.333 0.00 0.00 0.00 2.29
1507 1662 7.282585 TCGATCAAAATGAATAGAAGGGATGT 58.717 34.615 0.00 0.00 0.00 3.06
1508 1663 7.734924 TCGATCAAAATGAATAGAAGGGATG 57.265 36.000 0.00 0.00 0.00 3.51
1509 1664 8.159447 TCATCGATCAAAATGAATAGAAGGGAT 58.841 33.333 0.00 0.00 0.00 3.85
1510 1665 7.442364 GTCATCGATCAAAATGAATAGAAGGGA 59.558 37.037 0.00 0.00 33.89 4.20
1511 1666 7.227314 TGTCATCGATCAAAATGAATAGAAGGG 59.773 37.037 0.00 0.00 33.89 3.95
1512 1667 8.146479 TGTCATCGATCAAAATGAATAGAAGG 57.854 34.615 0.00 0.00 33.89 3.46
1513 1668 9.647679 CTTGTCATCGATCAAAATGAATAGAAG 57.352 33.333 0.00 2.85 33.89 2.85
1514 1669 9.166173 ACTTGTCATCGATCAAAATGAATAGAA 57.834 29.630 0.00 3.98 33.89 2.10
1515 1670 8.722480 ACTTGTCATCGATCAAAATGAATAGA 57.278 30.769 0.00 0.00 33.89 1.98
1519 1674 9.773328 GAAATACTTGTCATCGATCAAAATGAA 57.227 29.630 0.00 0.00 33.89 2.57
1520 1675 8.397906 GGAAATACTTGTCATCGATCAAAATGA 58.602 33.333 0.00 0.00 0.00 2.57
1521 1676 7.374228 CGGAAATACTTGTCATCGATCAAAATG 59.626 37.037 0.00 0.00 0.00 2.32
1522 1677 7.409697 CGGAAATACTTGTCATCGATCAAAAT 58.590 34.615 0.00 0.00 0.00 1.82
1523 1678 6.183360 CCGGAAATACTTGTCATCGATCAAAA 60.183 38.462 0.00 0.00 0.00 2.44
1524 1679 5.293324 CCGGAAATACTTGTCATCGATCAAA 59.707 40.000 0.00 0.00 0.00 2.69
1525 1680 4.808895 CCGGAAATACTTGTCATCGATCAA 59.191 41.667 0.00 0.00 0.00 2.57
1526 1681 4.098807 TCCGGAAATACTTGTCATCGATCA 59.901 41.667 0.00 0.00 0.00 2.92
1527 1682 4.444720 GTCCGGAAATACTTGTCATCGATC 59.555 45.833 5.23 0.00 0.00 3.69
1528 1683 4.369182 GTCCGGAAATACTTGTCATCGAT 58.631 43.478 5.23 0.00 0.00 3.59
1529 1684 3.732774 CGTCCGGAAATACTTGTCATCGA 60.733 47.826 5.23 0.00 0.00 3.59
1530 1685 2.534349 CGTCCGGAAATACTTGTCATCG 59.466 50.000 5.23 0.00 0.00 3.84
1531 1686 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
1532 1687 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
1533 1688 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
1534 1689 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1535 1690 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1536 1691 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1537 1692 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1538 1693 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1539 1694 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1540 1695 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1541 1696 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1542 1697 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
1543 1698 0.846015 TATACTCCCTCCGTCCGGAA 59.154 55.000 5.23 0.00 44.66 4.30
1544 1699 1.070604 ATATACTCCCTCCGTCCGGA 58.929 55.000 0.00 0.00 42.90 5.14
1545 1700 2.026449 AGTATATACTCCCTCCGTCCGG 60.026 54.545 9.71 0.00 0.00 5.14
1546 1701 3.347077 AGTATATACTCCCTCCGTCCG 57.653 52.381 9.71 0.00 0.00 4.79
1547 1702 4.220163 CCAAAGTATATACTCCCTCCGTCC 59.780 50.000 15.72 0.00 34.99 4.79
1548 1703 4.220163 CCCAAAGTATATACTCCCTCCGTC 59.780 50.000 15.72 0.00 34.99 4.79
1549 1704 4.140853 TCCCAAAGTATATACTCCCTCCGT 60.141 45.833 15.72 0.00 34.99 4.69
1550 1705 4.413760 TCCCAAAGTATATACTCCCTCCG 58.586 47.826 15.72 2.80 34.99 4.63
1551 1706 5.338463 GCATCCCAAAGTATATACTCCCTCC 60.338 48.000 15.72 0.00 34.99 4.30
1552 1707 5.338463 GGCATCCCAAAGTATATACTCCCTC 60.338 48.000 15.72 1.37 34.99 4.30
1553 1708 4.536489 GGCATCCCAAAGTATATACTCCCT 59.464 45.833 15.72 0.00 34.99 4.20
1554 1709 4.536489 AGGCATCCCAAAGTATATACTCCC 59.464 45.833 15.72 6.73 34.99 4.30
1555 1710 5.013183 ACAGGCATCCCAAAGTATATACTCC 59.987 44.000 15.72 9.82 34.99 3.85
1558 1713 5.003804 CCACAGGCATCCCAAAGTATATAC 58.996 45.833 4.60 4.60 0.00 1.47
1568 1723 4.365111 GGCACCACAGGCATCCCA 62.365 66.667 0.00 0.00 0.00 4.37
1588 1782 8.921670 AGAACACAAGTTGTAATCAAACAAAAC 58.078 29.630 8.49 0.00 40.85 2.43
1592 1786 7.120579 AGACAGAACACAAGTTGTAATCAAACA 59.879 33.333 8.49 0.00 37.51 2.83
1611 1808 1.055849 TTGTAGGCAGGCAGACAGAA 58.944 50.000 0.00 0.00 0.00 3.02
1620 1817 2.357009 GACATGCTGATTTGTAGGCAGG 59.643 50.000 0.00 0.00 41.34 4.85
1635 1832 2.159462 GGCTTGCAGAAACTAGACATGC 60.159 50.000 0.00 1.87 37.40 4.06
1640 1837 1.343142 TCACGGCTTGCAGAAACTAGA 59.657 47.619 0.00 0.00 0.00 2.43
1662 1859 0.037590 AACGGCATTTCTGGCTACCA 59.962 50.000 0.00 0.00 45.42 3.25
1667 1865 1.000274 ACTCAAAACGGCATTTCTGGC 60.000 47.619 0.00 0.00 44.21 4.85
1688 1886 2.106566 ACTGTGAGCCATAGAGGTCAG 58.893 52.381 6.07 0.00 40.61 3.51
1703 1902 2.223971 ACGAAGTGGTACTGGAACTGTG 60.224 50.000 0.00 0.00 42.51 3.66
1760 1971 7.361201 GCAAGCTATGACAAATTACTGAACTGA 60.361 37.037 0.00 0.00 0.00 3.41
1771 1982 5.434408 TGATCAGAGCAAGCTATGACAAAT 58.566 37.500 20.17 5.94 45.36 2.32
1777 1988 4.505808 CCCTATGATCAGAGCAAGCTATG 58.494 47.826 12.00 10.26 36.69 2.23
1778 1989 3.518705 CCCCTATGATCAGAGCAAGCTAT 59.481 47.826 12.00 0.00 0.00 2.97
1794 2005 2.090606 TGTACCCCACGATTACCCCTAT 60.091 50.000 0.00 0.00 0.00 2.57
1806 2017 4.881850 CCTACTCAAATCATTGTACCCCAC 59.118 45.833 0.00 0.00 37.79 4.61
1807 2018 4.785914 TCCTACTCAAATCATTGTACCCCA 59.214 41.667 0.00 0.00 37.79 4.96
1825 2221 3.814005 ACATTGTACCGTGGATCCTAC 57.186 47.619 14.23 7.60 0.00 3.18
1834 2230 2.087501 TCGATGCAACATTGTACCGT 57.912 45.000 0.00 0.00 0.00 4.83
1835 2231 3.553917 TGTATCGATGCAACATTGTACCG 59.446 43.478 14.17 0.00 0.00 4.02
1855 2251 3.248266 GAACAAAGTACGGCGAGTATGT 58.752 45.455 16.62 9.07 37.69 2.29
1859 2255 2.450609 ATGAACAAAGTACGGCGAGT 57.549 45.000 16.62 0.00 0.00 4.18
1860 2256 3.508762 ACTATGAACAAAGTACGGCGAG 58.491 45.455 16.62 0.00 0.00 5.03
1864 2260 5.390567 GCCTGAAACTATGAACAAAGTACGG 60.391 44.000 0.00 0.00 0.00 4.02
1900 2296 1.722271 TCTATCCTAGGCAGCCCCATA 59.278 52.381 8.22 0.00 35.39 2.74
1906 2302 5.656416 AGATATTGACTCTATCCTAGGCAGC 59.344 44.000 2.96 0.00 32.36 5.25
1936 2332 6.968904 CAGCACATCACTTAAATCATTGTACC 59.031 38.462 0.00 0.00 0.00 3.34
1941 2337 7.040201 ACAAGACAGCACATCACTTAAATCATT 60.040 33.333 0.00 0.00 0.00 2.57
1942 2338 6.432162 ACAAGACAGCACATCACTTAAATCAT 59.568 34.615 0.00 0.00 0.00 2.45
1943 2339 5.764686 ACAAGACAGCACATCACTTAAATCA 59.235 36.000 0.00 0.00 0.00 2.57
1944 2340 6.148480 AGACAAGACAGCACATCACTTAAATC 59.852 38.462 0.00 0.00 0.00 2.17
1945 2341 6.000219 AGACAAGACAGCACATCACTTAAAT 59.000 36.000 0.00 0.00 0.00 1.40
1946 2342 5.368145 AGACAAGACAGCACATCACTTAAA 58.632 37.500 0.00 0.00 0.00 1.52
1947 2343 4.960938 AGACAAGACAGCACATCACTTAA 58.039 39.130 0.00 0.00 0.00 1.85
1948 2344 4.607293 AGACAAGACAGCACATCACTTA 57.393 40.909 0.00 0.00 0.00 2.24
1949 2345 3.482156 AGACAAGACAGCACATCACTT 57.518 42.857 0.00 0.00 0.00 3.16
1959 2360 5.410746 AGTCACATGCATTTAGACAAGACAG 59.589 40.000 19.35 0.00 0.00 3.51
1984 2388 0.746659 AGGTCAAGTTGCAGCAAACC 59.253 50.000 16.21 16.21 0.00 3.27
2005 2410 2.975732 ATCCATCGATCCATCATCCG 57.024 50.000 0.00 0.00 0.00 4.18
2074 2479 7.521529 CAGACACAATGTTATCACTTACCAAG 58.478 38.462 0.00 0.00 0.00 3.61
2086 2491 2.371841 AGGGACTGCAGACACAATGTTA 59.628 45.455 23.35 0.00 37.18 2.41
2095 2500 1.968540 GTGCCAAGGGACTGCAGAC 60.969 63.158 23.35 15.15 38.05 3.51
2109 2515 5.530171 AGACATGATCATCTTGTAATGTGCC 59.470 40.000 4.86 0.00 35.29 5.01
2135 2541 5.185454 TGATCGCTTCCATTCTATGTTGTT 58.815 37.500 0.00 0.00 0.00 2.83
2140 2546 6.738832 ATTCATGATCGCTTCCATTCTATG 57.261 37.500 0.00 0.00 0.00 2.23
2141 2547 7.309012 CCAAATTCATGATCGCTTCCATTCTAT 60.309 37.037 0.00 0.00 0.00 1.98
2223 2629 4.701765 ACAAATACCAATGCACAGCAAAA 58.298 34.783 0.00 0.00 43.62 2.44
2225 2631 4.056740 CAACAAATACCAATGCACAGCAA 58.943 39.130 0.00 0.00 43.62 3.91
2233 2639 4.496360 TGCTGCATCAACAAATACCAATG 58.504 39.130 0.00 0.00 0.00 2.82
2239 2645 6.206048 CCTGAGATATGCTGCATCAACAAATA 59.794 38.462 19.90 0.00 0.00 1.40
2243 2649 3.135167 TCCTGAGATATGCTGCATCAACA 59.865 43.478 19.90 13.51 0.00 3.33
2266 2680 2.811431 TGTGCCTATGAAACTGAAACGG 59.189 45.455 0.00 0.00 0.00 4.44
2292 2706 9.076596 GCAAATATATGTTGGAACTTTGAAGAC 57.923 33.333 0.00 0.00 0.00 3.01
2298 2712 8.987890 GTTTGTGCAAATATATGTTGGAACTTT 58.012 29.630 0.00 0.00 32.36 2.66
2421 2840 6.500800 CACCAACGTTGTTGTTGATGAGCT 62.501 45.833 25.63 0.00 44.62 4.09
2422 2841 4.331576 CACCAACGTTGTTGTTGATGAGC 61.332 47.826 25.63 0.00 44.62 4.26
2434 2853 0.174617 AGGCAAAACCACCAACGTTG 59.825 50.000 21.47 21.47 43.14 4.10
2437 2856 0.312729 GGTAGGCAAAACCACCAACG 59.687 55.000 0.00 0.00 43.14 4.10
2514 2933 8.174733 AGTGTTCTTCTCAAATTCAATGTCAT 57.825 30.769 0.00 0.00 0.00 3.06
2520 2939 9.621629 TTAACCTAGTGTTCTTCTCAAATTCAA 57.378 29.630 0.55 0.00 38.42 2.69
2526 2946 9.436957 GATGAATTAACCTAGTGTTCTTCTCAA 57.563 33.333 13.87 1.99 38.42 3.02
2543 2963 9.181061 CATGGTATATCAGGCATGATGAATTAA 57.819 33.333 23.44 2.77 45.89 1.40
2651 3072 4.933330 TGTGTCTTTATCGCATCTACCTC 58.067 43.478 0.00 0.00 0.00 3.85
2733 3154 5.765176 GGTTAGTTACAACCGCTCAAAATT 58.235 37.500 2.12 0.00 38.74 1.82
2796 3218 8.006298 ACTTCACTTATGAAAAACATCCACAA 57.994 30.769 0.00 0.00 44.28 3.33
2843 3265 2.599973 CCAATGATTGCGCTGCTTAAAC 59.400 45.455 9.73 0.00 0.00 2.01
2889 3311 8.748582 GCATGATTAACAAACATCACATGTATG 58.251 33.333 0.00 5.94 44.07 2.39
2899 3321 5.359009 CAGAGGGAGCATGATTAACAAACAT 59.641 40.000 0.00 0.00 0.00 2.71
2929 3351 5.277683 CCAGAATCATGCAAGTGTATAGTGC 60.278 44.000 0.00 0.00 38.78 4.40
2940 3362 2.299582 CAACCCAACCAGAATCATGCAA 59.700 45.455 0.00 0.00 0.00 4.08
2962 3384 8.932434 AGATCAGATGCTTATCTACAAGACTA 57.068 34.615 0.00 0.00 0.00 2.59
2963 3385 7.725397 AGAGATCAGATGCTTATCTACAAGACT 59.275 37.037 0.00 0.00 30.19 3.24
2964 3386 7.885297 AGAGATCAGATGCTTATCTACAAGAC 58.115 38.462 0.00 0.00 30.19 3.01
2965 3387 9.579932 TTAGAGATCAGATGCTTATCTACAAGA 57.420 33.333 0.00 0.00 30.19 3.02
3028 3450 1.301087 CTTGTAACGGGCGTCCACA 60.301 57.895 6.96 0.00 0.00 4.17
3089 3511 4.049817 AGCCGGAGAGGAGTCGGT 62.050 66.667 5.05 0.00 44.97 4.69
3147 3569 1.227263 CGGACGACTAGCCCAATGG 60.227 63.158 0.00 0.00 0.00 3.16
3148 3570 0.527817 GACGGACGACTAGCCCAATG 60.528 60.000 0.00 0.00 0.00 2.82
3149 3571 0.683504 AGACGGACGACTAGCCCAAT 60.684 55.000 0.00 0.00 0.00 3.16
3150 3572 1.303888 AGACGGACGACTAGCCCAA 60.304 57.895 0.00 0.00 0.00 4.12
3151 3573 2.044555 CAGACGGACGACTAGCCCA 61.045 63.158 0.00 0.00 0.00 5.36
3152 3574 1.991099 GACAGACGGACGACTAGCCC 61.991 65.000 0.00 0.00 0.00 5.19
3153 3575 1.428620 GACAGACGGACGACTAGCC 59.571 63.158 0.00 0.00 0.00 3.93
3154 3576 1.303799 TGGACAGACGGACGACTAGC 61.304 60.000 0.00 0.00 0.00 3.42
3155 3577 1.331138 GATGGACAGACGGACGACTAG 59.669 57.143 0.00 0.00 0.00 2.57
3156 3578 1.339342 TGATGGACAGACGGACGACTA 60.339 52.381 0.00 0.00 0.00 2.59
3157 3579 0.608308 TGATGGACAGACGGACGACT 60.608 55.000 0.00 0.00 0.00 4.18
3158 3580 0.456312 GTGATGGACAGACGGACGAC 60.456 60.000 0.00 0.00 0.00 4.34
3159 3581 1.880894 GTGATGGACAGACGGACGA 59.119 57.895 0.00 0.00 0.00 4.20
3160 3582 1.514228 CGTGATGGACAGACGGACG 60.514 63.158 0.00 0.00 0.00 4.79
3161 3583 0.179161 CTCGTGATGGACAGACGGAC 60.179 60.000 0.00 0.00 0.00 4.79
3206 3628 3.422546 GCGCGCATGTTAAAAGTAAACAA 59.577 39.130 29.10 0.00 40.05 2.83
3282 3704 8.376889 ACAACAAAATAAAAACCATTGGCTAG 57.623 30.769 1.54 0.00 0.00 3.42
3287 3709 7.221645 GCCCAAACAACAAAATAAAAACCATTG 59.778 33.333 0.00 0.00 0.00 2.82
3290 3712 5.710099 TGCCCAAACAACAAAATAAAAACCA 59.290 32.000 0.00 0.00 0.00 3.67
3298 3720 5.096443 TCTTCTTGCCCAAACAACAAAAT 57.904 34.783 0.00 0.00 0.00 1.82
3376 3800 5.124776 TGCTAGTAAAACAAACAGCAAGTGT 59.875 36.000 0.00 0.00 43.24 3.55
3387 3811 7.820872 GGGAGTACTACATTGCTAGTAAAACAA 59.179 37.037 7.57 0.00 32.22 2.83
3388 3812 7.179694 AGGGAGTACTACATTGCTAGTAAAACA 59.820 37.037 7.57 0.00 32.22 2.83
3389 3813 7.554211 AGGGAGTACTACATTGCTAGTAAAAC 58.446 38.462 7.57 0.00 32.22 2.43
3393 3877 5.383476 GGAGGGAGTACTACATTGCTAGTA 58.617 45.833 7.57 0.00 0.00 1.82
3403 3887 1.211457 TCCAGACGGAGGGAGTACTAC 59.789 57.143 0.00 0.00 35.91 2.73
3404 3888 1.588239 TCCAGACGGAGGGAGTACTA 58.412 55.000 0.00 0.00 35.91 1.82
3405 3889 0.702902 TTCCAGACGGAGGGAGTACT 59.297 55.000 0.00 0.00 44.10 2.73
3406 3890 1.777941 ATTCCAGACGGAGGGAGTAC 58.222 55.000 0.00 0.00 44.10 2.73
3407 3891 2.544844 AATTCCAGACGGAGGGAGTA 57.455 50.000 0.00 0.00 44.10 2.59
3408 3892 2.108970 GTAATTCCAGACGGAGGGAGT 58.891 52.381 0.00 0.00 44.10 3.85
3409 3893 2.389715 AGTAATTCCAGACGGAGGGAG 58.610 52.381 0.00 0.00 44.10 4.30
3410 3894 2.500098 CAAGTAATTCCAGACGGAGGGA 59.500 50.000 0.00 0.00 44.10 4.20
3411 3895 2.236395 ACAAGTAATTCCAGACGGAGGG 59.764 50.000 0.00 0.00 44.10 4.30
3412 3896 3.056107 TGACAAGTAATTCCAGACGGAGG 60.056 47.826 0.00 0.00 44.10 4.30
3413 3897 3.927142 GTGACAAGTAATTCCAGACGGAG 59.073 47.826 0.00 0.00 44.10 4.63
3414 3898 3.613193 CGTGACAAGTAATTCCAGACGGA 60.613 47.826 0.00 0.00 40.60 4.69
3415 3899 2.666508 CGTGACAAGTAATTCCAGACGG 59.333 50.000 0.00 0.00 0.00 4.79
3416 3900 3.571571 TCGTGACAAGTAATTCCAGACG 58.428 45.455 0.00 0.00 0.00 4.18
3417 3901 5.917541 TTTCGTGACAAGTAATTCCAGAC 57.082 39.130 0.00 0.00 0.00 3.51
3418 3902 6.708502 TCATTTTCGTGACAAGTAATTCCAGA 59.291 34.615 0.00 0.00 0.00 3.86
3419 3903 6.898041 TCATTTTCGTGACAAGTAATTCCAG 58.102 36.000 0.00 0.00 0.00 3.86
3420 3904 6.869315 TCATTTTCGTGACAAGTAATTCCA 57.131 33.333 0.00 0.00 0.00 3.53
3421 3905 7.273381 CCATTCATTTTCGTGACAAGTAATTCC 59.727 37.037 0.00 0.00 0.00 3.01
3422 3906 8.020819 TCCATTCATTTTCGTGACAAGTAATTC 58.979 33.333 0.00 0.00 0.00 2.17
3423 3907 7.881142 TCCATTCATTTTCGTGACAAGTAATT 58.119 30.769 0.00 0.00 0.00 1.40
3424 3908 7.447374 TCCATTCATTTTCGTGACAAGTAAT 57.553 32.000 0.00 0.00 0.00 1.89
3425 3909 6.869315 TCCATTCATTTTCGTGACAAGTAA 57.131 33.333 0.00 0.00 0.00 2.24
3426 3910 6.869315 TTCCATTCATTTTCGTGACAAGTA 57.131 33.333 0.00 0.00 0.00 2.24
3427 3911 5.766150 TTCCATTCATTTTCGTGACAAGT 57.234 34.783 0.00 0.00 0.00 3.16
3428 3912 6.089820 CCATTTCCATTCATTTTCGTGACAAG 59.910 38.462 0.00 0.00 0.00 3.16
3429 3913 5.925397 CCATTTCCATTCATTTTCGTGACAA 59.075 36.000 0.00 0.00 0.00 3.18
3430 3914 5.242615 TCCATTTCCATTCATTTTCGTGACA 59.757 36.000 0.00 0.00 0.00 3.58
3431 3915 5.708948 TCCATTTCCATTCATTTTCGTGAC 58.291 37.500 0.00 0.00 0.00 3.67
3432 3916 5.973899 TCCATTTCCATTCATTTTCGTGA 57.026 34.783 0.00 0.00 0.00 4.35
3433 3917 6.101332 ACATCCATTTCCATTCATTTTCGTG 58.899 36.000 0.00 0.00 0.00 4.35
3434 3918 6.284891 ACATCCATTTCCATTCATTTTCGT 57.715 33.333 0.00 0.00 0.00 3.85
3435 3919 8.355169 AGATACATCCATTTCCATTCATTTTCG 58.645 33.333 0.00 0.00 0.00 3.46
3440 3924 9.512588 GTTCTAGATACATCCATTTCCATTCAT 57.487 33.333 0.00 0.00 0.00 2.57
3441 3925 8.717717 AGTTCTAGATACATCCATTTCCATTCA 58.282 33.333 0.00 0.00 0.00 2.57
3471 3955 8.766476 CCCAGAAATGGATGTATCTAGACATAT 58.234 37.037 0.00 0.00 40.18 1.78
3472 3956 7.955750 TCCCAGAAATGGATGTATCTAGACATA 59.044 37.037 0.00 0.00 40.18 2.29
3473 3957 6.789457 TCCCAGAAATGGATGTATCTAGACAT 59.211 38.462 0.00 0.00 42.82 3.06
3474 3958 6.042093 GTCCCAGAAATGGATGTATCTAGACA 59.958 42.308 0.00 0.00 33.65 3.41
3475 3959 6.042093 TGTCCCAGAAATGGATGTATCTAGAC 59.958 42.308 0.00 0.00 33.65 2.59
3476 3960 6.143206 TGTCCCAGAAATGGATGTATCTAGA 58.857 40.000 0.00 0.00 33.65 2.43
3477 3961 6.425210 TGTCCCAGAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
3478 3962 6.386927 ACTTGTCCCAGAAATGGATGTATCTA 59.613 38.462 0.00 0.00 33.65 1.98
3479 3963 5.192522 ACTTGTCCCAGAAATGGATGTATCT 59.807 40.000 0.00 0.00 33.65 1.98
3480 3964 5.440610 ACTTGTCCCAGAAATGGATGTATC 58.559 41.667 0.00 0.00 33.65 2.24
3481 3965 5.456921 ACTTGTCCCAGAAATGGATGTAT 57.543 39.130 0.00 0.00 33.65 2.29
3482 3966 4.927267 ACTTGTCCCAGAAATGGATGTA 57.073 40.909 0.00 0.00 33.65 2.29
3483 3967 3.814504 ACTTGTCCCAGAAATGGATGT 57.185 42.857 0.00 0.00 33.65 3.06
3484 3968 6.183360 GGAAATACTTGTCCCAGAAATGGATG 60.183 42.308 0.00 0.00 33.65 3.51
3485 3969 5.893824 GGAAATACTTGTCCCAGAAATGGAT 59.106 40.000 0.00 0.00 33.65 3.41
3486 3970 5.261216 GGAAATACTTGTCCCAGAAATGGA 58.739 41.667 0.00 0.00 0.00 3.41
3487 3971 4.096382 CGGAAATACTTGTCCCAGAAATGG 59.904 45.833 0.00 0.00 0.00 3.16
3488 3972 4.096382 CCGGAAATACTTGTCCCAGAAATG 59.904 45.833 0.00 0.00 0.00 2.32
3489 3973 4.018779 TCCGGAAATACTTGTCCCAGAAAT 60.019 41.667 0.00 0.00 0.00 2.17
3490 3974 3.328343 TCCGGAAATACTTGTCCCAGAAA 59.672 43.478 0.00 0.00 0.00 2.52
3491 3975 2.907696 TCCGGAAATACTTGTCCCAGAA 59.092 45.455 0.00 0.00 0.00 3.02
3492 3976 2.235402 GTCCGGAAATACTTGTCCCAGA 59.765 50.000 5.23 0.00 0.00 3.86
3493 3977 2.629051 GTCCGGAAATACTTGTCCCAG 58.371 52.381 5.23 0.00 0.00 4.45
3494 3978 1.066716 CGTCCGGAAATACTTGTCCCA 60.067 52.381 5.23 0.00 0.00 4.37
3495 3979 1.648504 CGTCCGGAAATACTTGTCCC 58.351 55.000 5.23 0.00 0.00 4.46
3496 3980 1.205417 TCCGTCCGGAAATACTTGTCC 59.795 52.381 5.23 0.00 42.05 4.02
3497 3981 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3498 3982 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3499 3983 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3500 3984 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3501 3985 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3502 3986 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3503 3987 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3504 3988 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3505 3989 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
3506 3990 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
3507 3991 1.351080 ATCTACTCCCTCCGTCCGGA 61.351 60.000 0.00 0.00 42.90 5.14
3508 3992 1.150992 ATCTACTCCCTCCGTCCGG 59.849 63.158 0.00 0.00 0.00 5.14
3509 3993 1.173444 CCATCTACTCCCTCCGTCCG 61.173 65.000 0.00 0.00 0.00 4.79
3510 3994 0.106116 ACCATCTACTCCCTCCGTCC 60.106 60.000 0.00 0.00 0.00 4.79
3511 3995 1.777941 AACCATCTACTCCCTCCGTC 58.222 55.000 0.00 0.00 0.00 4.79
3512 3996 2.249309 AAACCATCTACTCCCTCCGT 57.751 50.000 0.00 0.00 0.00 4.69
3513 3997 3.895656 TCATAAACCATCTACTCCCTCCG 59.104 47.826 0.00 0.00 0.00 4.63
3514 3998 5.799213 CATCATAAACCATCTACTCCCTCC 58.201 45.833 0.00 0.00 0.00 4.30
3515 3999 5.241662 GCATCATAAACCATCTACTCCCTC 58.758 45.833 0.00 0.00 0.00 4.30
3516 4000 4.042187 GGCATCATAAACCATCTACTCCCT 59.958 45.833 0.00 0.00 0.00 4.20
3517 4001 4.042187 AGGCATCATAAACCATCTACTCCC 59.958 45.833 0.00 0.00 0.00 4.30
3518 4002 4.999950 CAGGCATCATAAACCATCTACTCC 59.000 45.833 0.00 0.00 0.00 3.85
3519 4003 5.615289 ACAGGCATCATAAACCATCTACTC 58.385 41.667 0.00 0.00 0.00 2.59
3520 4004 5.636903 ACAGGCATCATAAACCATCTACT 57.363 39.130 0.00 0.00 0.00 2.57
3521 4005 6.699575 AAACAGGCATCATAAACCATCTAC 57.300 37.500 0.00 0.00 0.00 2.59
3551 4037 5.016051 TCATCAGCAGAGACTATCAAACC 57.984 43.478 0.00 0.00 0.00 3.27
3564 4050 4.497006 CGCTAATTTTCCCTTCATCAGCAG 60.497 45.833 0.00 0.00 0.00 4.24
3565 4051 3.378112 CGCTAATTTTCCCTTCATCAGCA 59.622 43.478 0.00 0.00 0.00 4.41
3576 4062 1.544246 ACCAACCAGCGCTAATTTTCC 59.456 47.619 10.99 0.00 0.00 3.13
3582 4068 3.152865 TGGACCAACCAGCGCTAA 58.847 55.556 10.99 0.00 44.64 3.09
3592 4081 1.106351 AACGTGCAAGCATGGACCAA 61.106 50.000 17.61 0.00 44.30 3.67
3595 4084 2.697431 TAAAACGTGCAAGCATGGAC 57.303 45.000 17.61 3.22 43.77 4.02
3616 4105 5.949354 TGGACTTTTCTTTTTCTTCTCCACA 59.051 36.000 0.00 0.00 0.00 4.17
3618 4107 5.067805 GCTGGACTTTTCTTTTTCTTCTCCA 59.932 40.000 0.00 0.00 0.00 3.86
3620 4109 6.038714 TCAGCTGGACTTTTCTTTTTCTTCTC 59.961 38.462 15.13 0.00 0.00 2.87
3625 4114 6.584184 GCTTATCAGCTGGACTTTTCTTTTTC 59.416 38.462 15.13 0.00 43.51 2.29
3626 4115 6.450545 GCTTATCAGCTGGACTTTTCTTTTT 58.549 36.000 15.13 0.00 43.51 1.94
3627 4116 5.335191 CGCTTATCAGCTGGACTTTTCTTTT 60.335 40.000 15.13 0.00 44.85 2.27
3628 4117 4.154918 CGCTTATCAGCTGGACTTTTCTTT 59.845 41.667 15.13 0.00 44.85 2.52
3717 4207 4.403137 CATGGCCACACGCAACGG 62.403 66.667 8.16 0.00 40.31 4.44
3793 4293 0.742990 CCGTTCCGAGCCAATAAGCA 60.743 55.000 0.00 0.00 34.23 3.91
3818 4318 4.069300 TCTTCTGATCATCATCACAGGC 57.931 45.455 0.00 0.00 33.80 4.85
3830 4334 5.776173 TCTCCCGATTACTTCTTCTGATC 57.224 43.478 0.00 0.00 0.00 2.92
3985 4495 3.986996 TGATCATCTTCTTCTGCACCA 57.013 42.857 0.00 0.00 0.00 4.17
3988 4498 6.541278 CCAGTTAATGATCATCTTCTTCTGCA 59.459 38.462 9.06 0.00 0.00 4.41
3989 4499 6.541641 ACCAGTTAATGATCATCTTCTTCTGC 59.458 38.462 9.06 0.00 0.00 4.26
4014 4524 3.030291 AGTGGTGGAAACAATGCTTCAA 58.970 40.909 0.00 0.00 46.06 2.69
4040 4550 9.859427 TTAGCTTGAATTTTTCATACATGGAAG 57.141 29.630 0.00 0.00 39.84 3.46
4053 4563 5.123820 TGCGCTGACTATTAGCTTGAATTTT 59.876 36.000 9.73 0.00 39.00 1.82
4054 4564 4.635765 TGCGCTGACTATTAGCTTGAATTT 59.364 37.500 9.73 0.00 39.00 1.82
4058 4568 2.930040 GTTGCGCTGACTATTAGCTTGA 59.070 45.455 9.73 0.00 39.00 3.02
4091 4606 5.010516 TGGTTGAGGGTCATTTTTGTGTATG 59.989 40.000 0.00 0.00 0.00 2.39


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.