Multiple sequence alignment - TraesCS1B01G361900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G361900 chr1B 100.000 2096 0 0 1 2096 590919698 590921793 0.000000e+00 3871.0
1 TraesCS1B01G361900 chr1B 90.909 605 41 6 389 983 590913553 590914153 0.000000e+00 800.0
2 TraesCS1B01G361900 chr1B 85.204 784 96 12 1173 1949 590914155 590914925 0.000000e+00 787.0
3 TraesCS1B01G361900 chr1B 91.935 62 5 0 1991 2052 590914930 590914991 1.030000e-13 87.9
4 TraesCS1B01G361900 chr1B 91.489 47 4 0 2050 2096 590932056 590932102 4.830000e-07 65.8
5 TraesCS1B01G361900 chr5D 82.584 890 128 18 52 922 168859211 168860092 0.000000e+00 760.0
6 TraesCS1B01G361900 chr5D 93.782 193 11 1 984 1175 554200757 554200949 2.630000e-74 289.0
7 TraesCS1B01G361900 chr7A 79.412 952 160 28 48 983 317126040 317126971 6.310000e-180 640.0
8 TraesCS1B01G361900 chr4A 82.248 614 79 22 284 880 477950817 477951417 8.630000e-139 503.0
9 TraesCS1B01G361900 chr4A 100.000 30 0 0 1444 1473 633573025 633573054 2.900000e-04 56.5
10 TraesCS1B01G361900 chr4A 100.000 30 0 0 1444 1473 633676771 633676800 2.900000e-04 56.5
11 TraesCS1B01G361900 chr5B 80.505 554 88 12 382 921 194126957 194126410 6.960000e-110 407.0
12 TraesCS1B01G361900 chr5B 79.450 618 94 19 382 983 244641336 244640736 6.960000e-110 407.0
13 TraesCS1B01G361900 chr5B 86.486 74 10 0 1234 1307 174753321 174753248 4.790000e-12 82.4
14 TraesCS1B01G361900 chr6D 81.368 424 55 17 381 792 89261556 89261145 7.210000e-85 324.0
15 TraesCS1B01G361900 chr6D 93.782 193 11 1 984 1175 431400438 431400630 2.630000e-74 289.0
16 TraesCS1B01G361900 chr3D 77.375 579 106 20 381 943 254215923 254216492 9.330000e-84 320.0
17 TraesCS1B01G361900 chr3D 93.782 193 11 1 984 1175 21897973 21898165 2.630000e-74 289.0
18 TraesCS1B01G361900 chr3D 86.383 235 32 0 48 282 237779776 237780010 7.420000e-65 257.0
19 TraesCS1B01G361900 chr3D 87.611 113 10 3 381 491 254215615 254215725 6.070000e-26 128.0
20 TraesCS1B01G361900 chr3B 94.301 193 10 1 984 1175 201506990 201507182 5.650000e-76 294.0
21 TraesCS1B01G361900 chrUn 94.211 190 10 1 987 1175 317472773 317472584 2.630000e-74 289.0
22 TraesCS1B01G361900 chrUn 93.782 193 11 1 984 1175 404958650 404958842 2.630000e-74 289.0
23 TraesCS1B01G361900 chr2D 93.782 193 11 1 984 1175 628286086 628286278 2.630000e-74 289.0
24 TraesCS1B01G361900 chr1D 93.782 193 11 1 984 1175 394179327 394179519 2.630000e-74 289.0
25 TraesCS1B01G361900 chr1D 94.211 190 10 1 987 1175 483922542 483922353 2.630000e-74 289.0
26 TraesCS1B01G361900 chr1D 93.182 44 3 0 2053 2096 481394810 481394767 4.830000e-07 65.8
27 TraesCS1B01G361900 chr1D 92.683 41 1 1 2053 2093 398468768 398468730 8.080000e-05 58.4
28 TraesCS1B01G361900 chr3A 85.892 241 34 0 48 288 341397426 341397186 7.420000e-65 257.0
29 TraesCS1B01G361900 chr4D 78.302 318 45 16 383 687 208563692 208563998 1.280000e-42 183.0
30 TraesCS1B01G361900 chr7B 90.909 44 1 1 2053 2096 533777943 533777983 2.900000e-04 56.5
31 TraesCS1B01G361900 chr6A 100.000 30 0 0 1444 1473 527275691 527275720 2.900000e-04 56.5
32 TraesCS1B01G361900 chr6A 100.000 30 0 0 1444 1473 527336279 527336250 2.900000e-04 56.5
33 TraesCS1B01G361900 chr5A 90.476 42 4 0 1444 1485 117199907 117199866 2.900000e-04 56.5
34 TraesCS1B01G361900 chr5A 90.476 42 4 0 1444 1485 117207470 117207429 2.900000e-04 56.5
35 TraesCS1B01G361900 chr2A 92.500 40 2 1 2053 2092 644310945 644310983 2.900000e-04 56.5
36 TraesCS1B01G361900 chr1A 100.000 30 0 0 1444 1473 273741310 273741281 2.900000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G361900 chr1B 590919698 590921793 2095 False 3871.0 3871 100.000000 1 2096 1 chr1B.!!$F1 2095
1 TraesCS1B01G361900 chr1B 590913553 590914991 1438 False 558.3 800 89.349333 389 2052 3 chr1B.!!$F3 1663
2 TraesCS1B01G361900 chr5D 168859211 168860092 881 False 760.0 760 82.584000 52 922 1 chr5D.!!$F1 870
3 TraesCS1B01G361900 chr7A 317126040 317126971 931 False 640.0 640 79.412000 48 983 1 chr7A.!!$F1 935
4 TraesCS1B01G361900 chr4A 477950817 477951417 600 False 503.0 503 82.248000 284 880 1 chr4A.!!$F1 596
5 TraesCS1B01G361900 chr5B 194126410 194126957 547 True 407.0 407 80.505000 382 921 1 chr5B.!!$R2 539
6 TraesCS1B01G361900 chr5B 244640736 244641336 600 True 407.0 407 79.450000 382 983 1 chr5B.!!$R3 601
7 TraesCS1B01G361900 chr3D 254215615 254216492 877 False 224.0 320 82.493000 381 943 2 chr3D.!!$F3 562

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
45 46 0.249398 GTAGCCAGTACACCTGTGGG 59.751 60.0 1.91 0.0 39.74 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1975 2354 0.032678 CGAGCTCGAGGTGGCATTAT 59.967 55.0 32.06 0.0 43.02 1.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.216411 TCTTGGGGATTTTCTCTAACGG 57.784 45.455 0.00 0.00 0.00 4.44
22 23 3.054655 TCTTGGGGATTTTCTCTAACGGG 60.055 47.826 0.00 0.00 0.00 5.28
23 24 2.553464 TGGGGATTTTCTCTAACGGGA 58.447 47.619 0.00 0.00 0.00 5.14
24 25 3.120108 TGGGGATTTTCTCTAACGGGAT 58.880 45.455 0.00 0.00 0.00 3.85
25 26 3.526019 TGGGGATTTTCTCTAACGGGATT 59.474 43.478 0.00 0.00 0.00 3.01
26 27 3.883489 GGGGATTTTCTCTAACGGGATTG 59.117 47.826 0.00 0.00 0.00 2.67
27 28 4.524053 GGGATTTTCTCTAACGGGATTGT 58.476 43.478 0.00 0.00 0.00 2.71
28 29 5.397109 GGGGATTTTCTCTAACGGGATTGTA 60.397 44.000 0.00 0.00 0.00 2.41
29 30 5.758784 GGGATTTTCTCTAACGGGATTGTAG 59.241 44.000 0.00 0.00 0.00 2.74
30 31 5.236695 GGATTTTCTCTAACGGGATTGTAGC 59.763 44.000 0.00 0.00 0.00 3.58
31 32 3.814005 TTCTCTAACGGGATTGTAGCC 57.186 47.619 0.00 0.00 0.00 3.93
32 33 2.742348 TCTCTAACGGGATTGTAGCCA 58.258 47.619 0.00 0.00 0.00 4.75
33 34 2.693591 TCTCTAACGGGATTGTAGCCAG 59.306 50.000 0.00 0.00 0.00 4.85
34 35 2.431057 CTCTAACGGGATTGTAGCCAGT 59.569 50.000 0.00 0.00 35.28 4.00
35 36 3.634504 TCTAACGGGATTGTAGCCAGTA 58.365 45.455 0.00 0.00 32.55 2.74
36 37 2.685850 AACGGGATTGTAGCCAGTAC 57.314 50.000 0.00 0.00 32.55 2.73
37 38 1.563924 ACGGGATTGTAGCCAGTACA 58.436 50.000 0.00 0.00 40.06 2.90
38 39 1.206371 ACGGGATTGTAGCCAGTACAC 59.794 52.381 0.00 0.00 41.58 2.90
39 40 1.472728 CGGGATTGTAGCCAGTACACC 60.473 57.143 0.00 0.00 41.58 4.16
40 41 1.838077 GGGATTGTAGCCAGTACACCT 59.162 52.381 0.00 0.00 41.58 4.00
41 42 2.420129 GGGATTGTAGCCAGTACACCTG 60.420 54.545 0.00 0.00 41.58 4.00
42 43 2.236395 GGATTGTAGCCAGTACACCTGT 59.764 50.000 0.00 0.00 41.58 4.00
43 44 2.831685 TTGTAGCCAGTACACCTGTG 57.168 50.000 0.00 0.00 41.58 3.66
44 45 0.973632 TGTAGCCAGTACACCTGTGG 59.026 55.000 1.91 0.00 39.74 4.17
45 46 0.249398 GTAGCCAGTACACCTGTGGG 59.751 60.000 1.91 0.00 39.74 4.61
47 48 1.003718 GCCAGTACACCTGTGGGTC 60.004 63.158 1.91 0.00 45.41 4.46
48 49 1.677552 CCAGTACACCTGTGGGTCC 59.322 63.158 1.91 0.00 45.41 4.46
49 50 0.836400 CCAGTACACCTGTGGGTCCT 60.836 60.000 1.91 0.00 45.41 3.85
50 51 1.551560 CCAGTACACCTGTGGGTCCTA 60.552 57.143 1.91 0.00 45.41 2.94
101 102 1.074248 GTTGAAGCCCCCGGAGAAA 59.926 57.895 0.73 0.00 0.00 2.52
109 110 2.181021 CCCGGAGAAACCTCGACG 59.819 66.667 0.73 0.00 36.31 5.12
140 141 2.125952 CTCGCCTGCATGTCGACA 60.126 61.111 22.48 22.48 0.00 4.35
197 198 3.477530 CTTAGTAACCCTATTGCCCTGC 58.522 50.000 0.00 0.00 0.00 4.85
210 211 1.693640 CCCTGCAGATCCCACCTTT 59.306 57.895 17.39 0.00 0.00 3.11
222 223 3.248024 TCCCACCTTTGTGTCATAGACT 58.752 45.455 0.00 0.00 41.09 3.24
223 224 3.007940 TCCCACCTTTGTGTCATAGACTG 59.992 47.826 0.00 0.00 41.09 3.51
242 243 6.759272 AGACTGTCATGTGTATGTTTGTAGT 58.241 36.000 10.88 0.00 35.73 2.73
270 271 6.025896 GTGTAGTGCTTGATTGAATGATGTG 58.974 40.000 0.00 0.00 0.00 3.21
322 323 6.709145 TGCTTGTTATTTGTGATTTGCATC 57.291 33.333 0.00 0.00 0.00 3.91
323 324 5.638657 TGCTTGTTATTTGTGATTTGCATCC 59.361 36.000 0.00 0.00 0.00 3.51
331 332 3.499338 TGTGATTTGCATCCAGTTCCTT 58.501 40.909 0.00 0.00 0.00 3.36
332 333 3.256383 TGTGATTTGCATCCAGTTCCTTG 59.744 43.478 0.00 0.00 0.00 3.61
351 352 5.001232 CCTTGGACCTTAACAAATCTCGAA 58.999 41.667 0.00 0.00 0.00 3.71
376 382 3.554731 CGAGATTTTCTTAAGCGGGGTAC 59.445 47.826 0.00 0.00 0.00 3.34
404 719 7.535489 TTGTAACAACCCAAAAATTTAACCG 57.465 32.000 0.00 0.00 0.00 4.44
553 895 8.989653 TGTGGTTTTCGAAAGTTTTCTTAAAT 57.010 26.923 10.98 0.00 39.48 1.40
656 1003 7.255590 CCTTTTCTGACTTTTAAATGCTCCTGA 60.256 37.037 1.19 0.00 0.00 3.86
810 1162 7.110155 TCTTTTCAGTTATGTCCCATCCTTAC 58.890 38.462 0.00 0.00 0.00 2.34
811 1163 6.381498 TTTCAGTTATGTCCCATCCTTACA 57.619 37.500 0.00 0.00 0.00 2.41
901 1254 2.107726 ACCAAACCCTTAAGTCCAGGAC 59.892 50.000 12.25 12.25 32.41 3.85
905 1258 1.831736 ACCCTTAAGTCCAGGACATCG 59.168 52.381 22.31 6.77 34.60 3.84
909 1262 0.616395 TAAGTCCAGGACATCGGCCA 60.616 55.000 22.31 0.00 34.60 5.36
922 1275 0.810648 TCGGCCACATTTGCATCTTC 59.189 50.000 2.24 0.00 0.00 2.87
964 1317 2.904434 TCCAAGTTAGGGTCCAGAAGTC 59.096 50.000 0.00 0.00 0.00 3.01
983 1336 7.869429 CAGAAGTCCATTTCAATAAAAGTTGCT 59.131 33.333 0.00 0.00 0.00 3.91
984 1337 7.869429 AGAAGTCCATTTCAATAAAAGTTGCTG 59.131 33.333 0.00 0.00 0.00 4.41
985 1338 7.054491 AGTCCATTTCAATAAAAGTTGCTGT 57.946 32.000 0.00 0.00 0.00 4.40
986 1339 8.177119 AGTCCATTTCAATAAAAGTTGCTGTA 57.823 30.769 0.00 0.00 0.00 2.74
987 1340 8.637986 AGTCCATTTCAATAAAAGTTGCTGTAA 58.362 29.630 0.00 0.00 0.00 2.41
988 1341 9.423061 GTCCATTTCAATAAAAGTTGCTGTAAT 57.577 29.630 0.00 0.00 0.00 1.89
989 1342 9.995003 TCCATTTCAATAAAAGTTGCTGTAATT 57.005 25.926 0.00 0.00 0.00 1.40
1002 1355 9.683069 AAGTTGCTGTAATTTAACTCTTTCATG 57.317 29.630 0.00 0.00 32.61 3.07
1003 1356 7.809806 AGTTGCTGTAATTTAACTCTTTCATGC 59.190 33.333 0.00 0.00 0.00 4.06
1004 1357 7.452880 TGCTGTAATTTAACTCTTTCATGCT 57.547 32.000 0.00 0.00 0.00 3.79
1005 1358 7.885297 TGCTGTAATTTAACTCTTTCATGCTT 58.115 30.769 0.00 0.00 0.00 3.91
1006 1359 9.008965 TGCTGTAATTTAACTCTTTCATGCTTA 57.991 29.630 0.00 0.00 0.00 3.09
1007 1360 9.278734 GCTGTAATTTAACTCTTTCATGCTTAC 57.721 33.333 0.00 0.00 0.00 2.34
1017 1370 9.726438 AACTCTTTCATGCTTACATTAACTAGT 57.274 29.630 0.00 0.00 32.87 2.57
1018 1371 9.726438 ACTCTTTCATGCTTACATTAACTAGTT 57.274 29.630 13.68 13.68 32.87 2.24
1054 1407 7.832503 TTACTCGTTGCTTTAACTATAACCC 57.167 36.000 0.00 0.00 37.13 4.11
1055 1408 5.181009 ACTCGTTGCTTTAACTATAACCCC 58.819 41.667 0.00 0.00 37.13 4.95
1056 1409 5.163281 TCGTTGCTTTAACTATAACCCCA 57.837 39.130 0.00 0.00 37.13 4.96
1057 1410 5.180271 TCGTTGCTTTAACTATAACCCCAG 58.820 41.667 0.00 0.00 37.13 4.45
1058 1411 4.201881 CGTTGCTTTAACTATAACCCCAGC 60.202 45.833 0.00 0.00 37.13 4.85
1059 1412 4.855298 TGCTTTAACTATAACCCCAGCT 57.145 40.909 0.00 0.00 0.00 4.24
1060 1413 4.777463 TGCTTTAACTATAACCCCAGCTC 58.223 43.478 0.00 0.00 0.00 4.09
1061 1414 4.473559 TGCTTTAACTATAACCCCAGCTCT 59.526 41.667 0.00 0.00 0.00 4.09
1062 1415 5.664006 TGCTTTAACTATAACCCCAGCTCTA 59.336 40.000 0.00 0.00 0.00 2.43
1063 1416 6.329197 TGCTTTAACTATAACCCCAGCTCTAT 59.671 38.462 0.00 0.00 0.00 1.98
1064 1417 7.147373 TGCTTTAACTATAACCCCAGCTCTATT 60.147 37.037 0.00 0.00 0.00 1.73
1065 1418 7.720074 GCTTTAACTATAACCCCAGCTCTATTT 59.280 37.037 0.00 0.00 0.00 1.40
1070 1423 7.690256 ACTATAACCCCAGCTCTATTTATTGG 58.310 38.462 0.00 0.00 0.00 3.16
1071 1424 3.884037 ACCCCAGCTCTATTTATTGGG 57.116 47.619 0.82 0.82 46.50 4.12
1072 1425 3.131252 ACCCCAGCTCTATTTATTGGGT 58.869 45.455 7.06 0.00 45.69 4.51
1073 1426 3.531814 ACCCCAGCTCTATTTATTGGGTT 59.468 43.478 7.06 0.00 45.69 4.11
1074 1427 3.891366 CCCCAGCTCTATTTATTGGGTTG 59.109 47.826 7.06 0.00 45.69 3.77
1075 1428 4.386312 CCCCAGCTCTATTTATTGGGTTGA 60.386 45.833 7.06 0.00 45.69 3.18
1076 1429 5.200483 CCCAGCTCTATTTATTGGGTTGAA 58.800 41.667 0.00 0.00 42.84 2.69
1077 1430 5.067805 CCCAGCTCTATTTATTGGGTTGAAC 59.932 44.000 0.00 0.00 42.84 3.18
1078 1431 5.652014 CCAGCTCTATTTATTGGGTTGAACA 59.348 40.000 0.00 0.00 0.00 3.18
1079 1432 6.152661 CCAGCTCTATTTATTGGGTTGAACAA 59.847 38.462 0.00 0.00 0.00 2.83
1080 1433 7.253422 CAGCTCTATTTATTGGGTTGAACAAG 58.747 38.462 0.00 0.00 0.00 3.16
1081 1434 7.121168 CAGCTCTATTTATTGGGTTGAACAAGA 59.879 37.037 0.00 0.00 0.00 3.02
1082 1435 7.836183 AGCTCTATTTATTGGGTTGAACAAGAT 59.164 33.333 0.00 0.00 0.00 2.40
1083 1436 9.120538 GCTCTATTTATTGGGTTGAACAAGATA 57.879 33.333 0.00 0.00 0.00 1.98
1085 1438 9.967451 TCTATTTATTGGGTTGAACAAGATACA 57.033 29.630 0.00 0.00 0.00 2.29
1087 1440 6.827586 TTATTGGGTTGAACAAGATACACC 57.172 37.500 0.00 0.00 0.00 4.16
1088 1441 4.447138 TTGGGTTGAACAAGATACACCT 57.553 40.909 0.00 0.00 0.00 4.00
1089 1442 4.447138 TGGGTTGAACAAGATACACCTT 57.553 40.909 0.00 0.00 0.00 3.50
1090 1443 5.570205 TGGGTTGAACAAGATACACCTTA 57.430 39.130 0.00 0.00 0.00 2.69
1091 1444 6.134535 TGGGTTGAACAAGATACACCTTAT 57.865 37.500 0.00 0.00 0.00 1.73
1092 1445 6.548321 TGGGTTGAACAAGATACACCTTATT 58.452 36.000 0.00 0.00 0.00 1.40
1093 1446 7.007723 TGGGTTGAACAAGATACACCTTATTT 58.992 34.615 0.00 0.00 0.00 1.40
1094 1447 7.040062 TGGGTTGAACAAGATACACCTTATTTG 60.040 37.037 0.00 0.00 0.00 2.32
1095 1448 7.175990 GGGTTGAACAAGATACACCTTATTTGA 59.824 37.037 0.00 0.00 0.00 2.69
1096 1449 8.573035 GGTTGAACAAGATACACCTTATTTGAA 58.427 33.333 0.00 0.00 0.00 2.69
1102 1455 9.520515 ACAAGATACACCTTATTTGAATTGACT 57.479 29.630 0.00 0.00 0.00 3.41
1103 1456 9.778993 CAAGATACACCTTATTTGAATTGACTG 57.221 33.333 0.00 0.00 0.00 3.51
1104 1457 9.739276 AAGATACACCTTATTTGAATTGACTGA 57.261 29.630 0.00 0.00 0.00 3.41
1105 1458 9.739276 AGATACACCTTATTTGAATTGACTGAA 57.261 29.630 0.00 0.00 0.00 3.02
1149 1502 7.616528 AAAAATCTTTCTTTGGGATTCCTCA 57.383 32.000 2.01 0.00 0.00 3.86
1150 1503 6.596309 AAATCTTTCTTTGGGATTCCTCAC 57.404 37.500 2.01 0.00 0.00 3.51
1151 1504 4.722526 TCTTTCTTTGGGATTCCTCACA 57.277 40.909 2.01 0.00 31.21 3.58
1152 1505 5.261040 TCTTTCTTTGGGATTCCTCACAT 57.739 39.130 2.01 0.00 33.92 3.21
1153 1506 5.644188 TCTTTCTTTGGGATTCCTCACATT 58.356 37.500 2.01 0.00 33.92 2.71
1154 1507 5.711976 TCTTTCTTTGGGATTCCTCACATTC 59.288 40.000 2.01 0.00 33.92 2.67
1155 1508 4.934797 TCTTTGGGATTCCTCACATTCT 57.065 40.909 2.01 0.00 33.92 2.40
1156 1509 6.387192 TTCTTTGGGATTCCTCACATTCTA 57.613 37.500 2.01 0.00 33.92 2.10
1157 1510 6.581388 TCTTTGGGATTCCTCACATTCTAT 57.419 37.500 2.01 0.00 33.92 1.98
1158 1511 6.359804 TCTTTGGGATTCCTCACATTCTATG 58.640 40.000 2.01 0.00 33.92 2.23
1159 1512 5.974156 TTGGGATTCCTCACATTCTATGA 57.026 39.130 2.01 0.00 33.92 2.15
1160 1513 5.296151 TGGGATTCCTCACATTCTATGAC 57.704 43.478 2.01 0.00 26.80 3.06
1161 1514 4.971282 TGGGATTCCTCACATTCTATGACT 59.029 41.667 2.01 0.00 26.80 3.41
1162 1515 5.429762 TGGGATTCCTCACATTCTATGACTT 59.570 40.000 2.01 0.00 26.80 3.01
1163 1516 6.069440 TGGGATTCCTCACATTCTATGACTTT 60.069 38.462 2.01 0.00 26.80 2.66
1164 1517 6.830838 GGGATTCCTCACATTCTATGACTTTT 59.169 38.462 2.01 0.00 0.00 2.27
1165 1518 7.340487 GGGATTCCTCACATTCTATGACTTTTT 59.660 37.037 2.01 0.00 0.00 1.94
1188 1541 5.767816 TCCAGCTAACAAGTTTTTCCTTC 57.232 39.130 0.00 0.00 0.00 3.46
1191 1544 5.507985 CCAGCTAACAAGTTTTTCCTTCTGG 60.508 44.000 0.00 0.00 30.06 3.86
1217 1570 7.627726 GCAAACCAACCTTACCATCATAACTAC 60.628 40.741 0.00 0.00 0.00 2.73
1230 1583 6.652481 CCATCATAACTACCATCCAATGAGAC 59.348 42.308 0.00 0.00 0.00 3.36
1259 1612 3.146104 ACCAAATCTCAGGTCCAACAG 57.854 47.619 0.00 0.00 30.79 3.16
1263 1616 4.392940 CAAATCTCAGGTCCAACAGAAGT 58.607 43.478 0.00 0.00 0.00 3.01
1322 1675 2.825532 GGCATGGCCGATATTTGGTAAT 59.174 45.455 8.35 0.00 39.62 1.89
1328 1681 4.202101 TGGCCGATATTTGGTAATTTGCTG 60.202 41.667 0.00 0.00 0.00 4.41
1342 1695 0.102844 TTGCTGAACTTGCACTTGGC 59.897 50.000 0.00 0.00 40.40 4.52
1346 1699 2.771089 CTGAACTTGCACTTGGCTCTA 58.229 47.619 0.00 0.00 45.15 2.43
1348 1701 2.368548 TGAACTTGCACTTGGCTCTAGA 59.631 45.455 0.00 0.00 45.15 2.43
1350 1703 3.710209 ACTTGCACTTGGCTCTAGATT 57.290 42.857 0.00 0.00 45.15 2.40
1358 1711 4.022935 CACTTGGCTCTAGATTGTTTTGCA 60.023 41.667 0.00 0.00 0.00 4.08
1371 1724 4.999751 TGTTTTGCAAAACCAACTTGAC 57.000 36.364 38.59 20.84 45.82 3.18
1376 1729 2.762887 TGCAAAACCAACTTGACCATCA 59.237 40.909 0.00 0.00 0.00 3.07
1382 1735 4.213564 ACCAACTTGACCATCATCTCTC 57.786 45.455 0.00 0.00 0.00 3.20
1384 1737 3.118992 CCAACTTGACCATCATCTCTCGA 60.119 47.826 0.00 0.00 0.00 4.04
1405 1758 4.320861 CGATTGCAAACAAACACCATCCTA 60.321 41.667 1.71 0.00 39.77 2.94
1406 1759 4.314740 TTGCAAACAAACACCATCCTAC 57.685 40.909 0.00 0.00 31.21 3.18
1412 1765 6.926272 GCAAACAAACACCATCCTACAAAATA 59.074 34.615 0.00 0.00 0.00 1.40
1416 1769 8.055279 ACAAACACCATCCTACAAAATATCAG 57.945 34.615 0.00 0.00 0.00 2.90
1434 1787 0.825010 AGCAGCAGAAAACCACCCTG 60.825 55.000 0.00 0.00 0.00 4.45
1436 1789 1.242076 CAGCAGAAAACCACCCTGAG 58.758 55.000 0.00 0.00 0.00 3.35
1437 1790 0.111253 AGCAGAAAACCACCCTGAGG 59.889 55.000 0.00 0.00 40.04 3.86
1448 1801 3.976704 CCCTGAGGTACATTGGCAA 57.023 52.632 0.68 0.68 0.00 4.52
1449 1802 2.442236 CCCTGAGGTACATTGGCAAT 57.558 50.000 6.96 6.96 0.00 3.56
1450 1803 2.738743 CCCTGAGGTACATTGGCAATT 58.261 47.619 10.65 5.16 0.00 2.32
1451 1804 2.689983 CCCTGAGGTACATTGGCAATTC 59.310 50.000 10.65 5.95 0.00 2.17
1452 1805 2.355756 CCTGAGGTACATTGGCAATTCG 59.644 50.000 10.65 2.79 0.00 3.34
1453 1806 3.009723 CTGAGGTACATTGGCAATTCGT 58.990 45.455 10.65 9.14 0.00 3.85
1454 1807 3.006940 TGAGGTACATTGGCAATTCGTC 58.993 45.455 10.65 14.17 0.00 4.20
1455 1808 2.006888 AGGTACATTGGCAATTCGTCG 58.993 47.619 10.65 1.20 0.00 5.12
1456 1809 2.004017 GGTACATTGGCAATTCGTCGA 58.996 47.619 10.65 0.00 0.00 4.20
1457 1810 2.030457 GGTACATTGGCAATTCGTCGAG 59.970 50.000 10.65 0.00 0.00 4.04
1458 1811 0.447801 ACATTGGCAATTCGTCGAGC 59.552 50.000 10.65 0.00 0.00 5.03
1459 1812 0.447406 CATTGGCAATTCGTCGAGCA 59.553 50.000 10.65 0.00 0.00 4.26
1460 1813 0.447801 ATTGGCAATTCGTCGAGCAC 59.552 50.000 6.96 0.00 0.00 4.40
1477 1830 1.810441 ACGTTTCGTGCGTGTCCAA 60.810 52.632 0.00 0.00 41.33 3.53
1503 1867 2.601666 TCGGCACTGAGCTCCTGT 60.602 61.111 12.15 7.48 44.79 4.00
1504 1868 2.210013 TCGGCACTGAGCTCCTGTT 61.210 57.895 12.15 0.00 44.79 3.16
1505 1869 0.898326 TCGGCACTGAGCTCCTGTTA 60.898 55.000 12.15 0.00 44.79 2.41
1511 1886 0.827368 CTGAGCTCCTGTTACCTCCC 59.173 60.000 12.15 0.00 0.00 4.30
1515 1890 1.908483 CTCCTGTTACCTCCCCTGC 59.092 63.158 0.00 0.00 0.00 4.85
1542 1917 1.078918 CACTCCATCCTGCTTCGCA 60.079 57.895 0.00 0.00 36.92 5.10
1576 1951 3.141488 CTCCGACACCTCCCCTCG 61.141 72.222 0.00 0.00 0.00 4.63
1583 1958 1.755008 CACCTCCCCTCGTCTCCTC 60.755 68.421 0.00 0.00 0.00 3.71
1585 1960 3.213402 CTCCCCTCGTCTCCTCGC 61.213 72.222 0.00 0.00 0.00 5.03
1604 1979 3.492353 CCGCCCTCCACCATCCAT 61.492 66.667 0.00 0.00 0.00 3.41
1606 1981 2.520260 GCCCTCCACCATCCATGC 60.520 66.667 0.00 0.00 0.00 4.06
1607 1982 2.196776 CCCTCCACCATCCATGCC 59.803 66.667 0.00 0.00 0.00 4.40
1610 1985 4.504596 TCCACCATCCATGCCCGC 62.505 66.667 0.00 0.00 0.00 6.13
1629 2004 1.078708 CGCCCATGGTTACCGTCTT 60.079 57.895 11.73 0.00 0.00 3.01
1635 2010 2.158813 CCATGGTTACCGTCTTGGCTAT 60.159 50.000 2.57 0.00 43.94 2.97
1691 2066 2.280552 AAGCTCCTCCCGTGCGTAA 61.281 57.895 0.00 0.00 36.07 3.18
1694 2069 1.660560 GCTCCTCCCGTGCGTAACTA 61.661 60.000 0.00 0.00 0.00 2.24
1696 2071 1.140375 CCTCCCGTGCGTAACTACC 59.860 63.158 0.00 0.00 0.00 3.18
1731 2106 3.066190 CTACCTCCGCCGTCCACA 61.066 66.667 0.00 0.00 0.00 4.17
1743 2118 1.651240 CGTCCACATACCGACCTCGT 61.651 60.000 0.00 0.00 37.74 4.18
1751 2126 0.179100 TACCGACCTCGTCTACCTCG 60.179 60.000 0.00 0.00 37.74 4.63
1757 2132 3.109612 CTCGTCTACCTCGCCACCG 62.110 68.421 0.00 0.00 0.00 4.94
1771 2146 1.671054 CACCGTCCTCGTTTGCCAT 60.671 57.895 0.00 0.00 35.01 4.40
1773 2148 0.536460 ACCGTCCTCGTTTGCCATTT 60.536 50.000 0.00 0.00 35.01 2.32
1838 2217 0.534203 GTGGTCTTCGAGCCAACCAA 60.534 55.000 10.61 0.00 43.09 3.67
1839 2218 0.400213 TGGTCTTCGAGCCAACCAAT 59.600 50.000 7.55 0.00 38.80 3.16
1854 2233 2.123597 AATGCGCCCTGCCATCAT 60.124 55.556 4.18 0.00 45.60 2.45
1858 2237 4.260355 CGCCCTGCCATCATTGCG 62.260 66.667 0.00 0.00 36.35 4.85
1862 2241 1.442526 CCCTGCCATCATTGCGAGAC 61.443 60.000 0.00 0.00 0.00 3.36
1883 2262 2.272146 GCCATCCACACCGACCAT 59.728 61.111 0.00 0.00 0.00 3.55
1889 2268 2.747022 CACACCGACCATCCACCA 59.253 61.111 0.00 0.00 0.00 4.17
1894 2273 1.377202 CCGACCATCCACCAACCTG 60.377 63.158 0.00 0.00 0.00 4.00
1920 2299 3.202001 CACCTGCCGCCGTAATGG 61.202 66.667 0.00 0.00 42.50 3.16
1949 2328 0.532862 CCATGCTTATCTTCGGGCGT 60.533 55.000 0.00 0.00 0.00 5.68
1951 2330 0.597637 ATGCTTATCTTCGGGCGTCG 60.598 55.000 0.00 0.00 40.90 5.12
1952 2331 2.586773 GCTTATCTTCGGGCGTCGC 61.587 63.158 9.22 9.22 39.05 5.19
1953 2332 2.278336 TTATCTTCGGGCGTCGCG 60.278 61.111 11.75 0.00 41.10 5.87
1954 2333 2.931713 CTTATCTTCGGGCGTCGCGT 62.932 60.000 11.75 0.00 40.60 6.01
1955 2334 1.713937 TTATCTTCGGGCGTCGCGTA 61.714 55.000 11.75 0.00 40.60 4.42
1956 2335 1.713937 TATCTTCGGGCGTCGCGTAA 61.714 55.000 11.75 4.34 40.60 3.18
1957 2336 3.539107 CTTCGGGCGTCGCGTAAC 61.539 66.667 11.75 0.00 40.60 2.50
1966 2345 3.672293 TCGCGTAACCGACCTTCT 58.328 55.556 5.77 0.00 35.63 2.85
1967 2346 1.503542 TCGCGTAACCGACCTTCTC 59.496 57.895 5.77 0.00 35.63 2.87
1968 2347 1.515736 CGCGTAACCGACCTTCTCC 60.516 63.158 0.00 0.00 35.63 3.71
1969 2348 1.515736 GCGTAACCGACCTTCTCCG 60.516 63.158 0.00 0.00 35.63 4.63
1974 2353 3.857764 CCGACCTTCTCCGGCTAT 58.142 61.111 0.00 0.00 39.22 2.97
1975 2354 3.031916 CCGACCTTCTCCGGCTATA 57.968 57.895 0.00 0.00 39.22 1.31
1976 2355 1.546961 CCGACCTTCTCCGGCTATAT 58.453 55.000 0.00 0.00 39.22 0.86
1977 2356 2.719739 CCGACCTTCTCCGGCTATATA 58.280 52.381 0.00 0.00 39.22 0.86
1978 2357 3.087031 CCGACCTTCTCCGGCTATATAA 58.913 50.000 0.00 0.00 39.22 0.98
1979 2358 3.700038 CCGACCTTCTCCGGCTATATAAT 59.300 47.826 0.00 0.00 39.22 1.28
1980 2359 4.440250 CCGACCTTCTCCGGCTATATAATG 60.440 50.000 0.00 0.00 39.22 1.90
1981 2360 4.434520 GACCTTCTCCGGCTATATAATGC 58.565 47.826 0.00 0.00 0.00 3.56
1982 2361 3.197983 ACCTTCTCCGGCTATATAATGCC 59.802 47.826 0.00 8.75 45.25 4.40
1995 2374 2.629050 TAATGCCACCTCGAGCTCGC 62.629 60.000 30.97 16.17 39.60 5.03
1998 2377 2.409651 CCACCTCGAGCTCGCTAC 59.590 66.667 30.97 0.00 39.60 3.58
2001 2380 3.877357 CCTCGAGCTCGCTACGCA 61.877 66.667 30.97 12.00 39.60 5.24
2021 2400 3.490348 CACTTCACCACAATCCCTTCTT 58.510 45.455 0.00 0.00 0.00 2.52
2023 2402 2.879103 TCACCACAATCCCTTCTTCC 57.121 50.000 0.00 0.00 0.00 3.46
2057 2436 3.268013 CGTAGGAGCAAAAACTGTTGG 57.732 47.619 0.00 0.00 0.00 3.77
2058 2437 2.616842 CGTAGGAGCAAAAACTGTTGGT 59.383 45.455 0.00 0.00 41.74 3.67
2059 2438 3.548014 CGTAGGAGCAAAAACTGTTGGTG 60.548 47.826 0.00 0.00 39.25 4.17
2060 2439 1.136891 AGGAGCAAAAACTGTTGGTGC 59.863 47.619 16.67 16.67 44.70 5.01
2061 2440 1.570813 GAGCAAAAACTGTTGGTGCC 58.429 50.000 19.33 10.98 39.25 5.01
2062 2441 0.179113 AGCAAAAACTGTTGGTGCCG 60.179 50.000 19.33 0.00 37.80 5.69
2063 2442 0.179124 GCAAAAACTGTTGGTGCCGA 60.179 50.000 14.53 0.00 0.00 5.54
2064 2443 1.737363 GCAAAAACTGTTGGTGCCGAA 60.737 47.619 14.53 0.00 0.00 4.30
2065 2444 2.611518 CAAAAACTGTTGGTGCCGAAA 58.388 42.857 0.00 0.00 0.00 3.46
2066 2445 2.287393 AAAACTGTTGGTGCCGAAAC 57.713 45.000 0.00 0.00 0.00 2.78
2067 2446 0.458260 AAACTGTTGGTGCCGAAACC 59.542 50.000 0.00 0.00 40.94 3.27
2068 2447 1.388837 AACTGTTGGTGCCGAAACCC 61.389 55.000 4.29 0.00 39.70 4.11
2069 2448 1.528309 CTGTTGGTGCCGAAACCCT 60.528 57.895 4.29 0.00 39.70 4.34
2070 2449 0.250553 CTGTTGGTGCCGAAACCCTA 60.251 55.000 4.29 0.00 39.70 3.53
2071 2450 0.183014 TGTTGGTGCCGAAACCCTAA 59.817 50.000 4.29 0.00 39.70 2.69
2072 2451 1.320507 GTTGGTGCCGAAACCCTAAA 58.679 50.000 4.29 0.00 39.70 1.85
2073 2452 1.001048 GTTGGTGCCGAAACCCTAAAC 60.001 52.381 4.29 0.00 39.70 2.01
2074 2453 0.537828 TGGTGCCGAAACCCTAAACC 60.538 55.000 4.29 0.00 39.70 3.27
2075 2454 1.246056 GGTGCCGAAACCCTAAACCC 61.246 60.000 0.00 0.00 33.79 4.11
2076 2455 0.251033 GTGCCGAAACCCTAAACCCT 60.251 55.000 0.00 0.00 0.00 4.34
2077 2456 1.003464 GTGCCGAAACCCTAAACCCTA 59.997 52.381 0.00 0.00 0.00 3.53
2078 2457 1.279846 TGCCGAAACCCTAAACCCTAG 59.720 52.381 0.00 0.00 0.00 3.02
2079 2458 2.015588 GCCGAAACCCTAAACCCTAGC 61.016 57.143 0.00 0.00 0.00 3.42
2080 2459 1.407851 CCGAAACCCTAAACCCTAGCC 60.408 57.143 0.00 0.00 0.00 3.93
2081 2460 1.558294 CGAAACCCTAAACCCTAGCCT 59.442 52.381 0.00 0.00 0.00 4.58
2082 2461 2.679930 CGAAACCCTAAACCCTAGCCTG 60.680 54.545 0.00 0.00 0.00 4.85
2083 2462 0.624254 AACCCTAAACCCTAGCCTGC 59.376 55.000 0.00 0.00 0.00 4.85
2084 2463 1.279749 ACCCTAAACCCTAGCCTGCC 61.280 60.000 0.00 0.00 0.00 4.85
2085 2464 1.532238 CCTAAACCCTAGCCTGCCC 59.468 63.158 0.00 0.00 0.00 5.36
2086 2465 0.988678 CCTAAACCCTAGCCTGCCCT 60.989 60.000 0.00 0.00 0.00 5.19
2087 2466 1.694693 CCTAAACCCTAGCCTGCCCTA 60.695 57.143 0.00 0.00 0.00 3.53
2088 2467 1.694696 CTAAACCCTAGCCTGCCCTAG 59.305 57.143 0.00 0.00 35.62 3.02
2089 2468 1.636769 AAACCCTAGCCTGCCCTAGC 61.637 60.000 0.00 0.00 34.74 3.42
2090 2469 2.122636 CCCTAGCCTGCCCTAGCT 60.123 66.667 0.00 0.00 43.20 3.32
2091 2470 2.213513 CCCTAGCCTGCCCTAGCTC 61.214 68.421 0.00 0.00 40.56 4.09
2092 2471 1.152355 CCTAGCCTGCCCTAGCTCT 60.152 63.158 0.00 0.00 40.56 4.09
2093 2472 0.113385 CCTAGCCTGCCCTAGCTCTA 59.887 60.000 0.00 0.00 40.56 2.43
2094 2473 1.253100 CTAGCCTGCCCTAGCTCTAC 58.747 60.000 0.00 0.00 40.56 2.59
2095 2474 0.178958 TAGCCTGCCCTAGCTCTACC 60.179 60.000 0.00 0.00 40.56 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.054655 CCCGTTAGAGAAAATCCCCAAGA 60.055 47.826 0.00 0.00 0.00 3.02
3 4 2.553464 TCCCGTTAGAGAAAATCCCCA 58.447 47.619 0.00 0.00 0.00 4.96
4 5 3.859061 ATCCCGTTAGAGAAAATCCCC 57.141 47.619 0.00 0.00 0.00 4.81
5 6 4.524053 ACAATCCCGTTAGAGAAAATCCC 58.476 43.478 0.00 0.00 0.00 3.85
6 7 5.236695 GCTACAATCCCGTTAGAGAAAATCC 59.763 44.000 0.00 0.00 0.00 3.01
7 8 5.236695 GGCTACAATCCCGTTAGAGAAAATC 59.763 44.000 0.00 0.00 0.00 2.17
8 9 5.123936 GGCTACAATCCCGTTAGAGAAAAT 58.876 41.667 0.00 0.00 0.00 1.82
9 10 4.020039 TGGCTACAATCCCGTTAGAGAAAA 60.020 41.667 0.00 0.00 0.00 2.29
10 11 3.516300 TGGCTACAATCCCGTTAGAGAAA 59.484 43.478 0.00 0.00 0.00 2.52
11 12 3.101437 TGGCTACAATCCCGTTAGAGAA 58.899 45.455 0.00 0.00 0.00 2.87
12 13 2.693591 CTGGCTACAATCCCGTTAGAGA 59.306 50.000 0.00 0.00 0.00 3.10
13 14 2.431057 ACTGGCTACAATCCCGTTAGAG 59.569 50.000 0.00 0.00 0.00 2.43
14 15 2.463752 ACTGGCTACAATCCCGTTAGA 58.536 47.619 0.00 0.00 0.00 2.10
15 16 2.981859 ACTGGCTACAATCCCGTTAG 57.018 50.000 0.00 0.00 0.00 2.34
16 17 3.098377 TGTACTGGCTACAATCCCGTTA 58.902 45.455 0.00 0.00 31.99 3.18
17 18 1.903860 TGTACTGGCTACAATCCCGTT 59.096 47.619 0.00 0.00 31.99 4.44
18 19 1.206371 GTGTACTGGCTACAATCCCGT 59.794 52.381 0.00 0.00 37.09 5.28
19 20 1.472728 GGTGTACTGGCTACAATCCCG 60.473 57.143 0.00 0.00 37.09 5.14
20 21 1.838077 AGGTGTACTGGCTACAATCCC 59.162 52.381 0.00 0.00 37.09 3.85
21 22 2.906354 CAGGTGTACTGGCTACAATCC 58.094 52.381 0.00 0.00 43.70 3.01
38 39 1.133009 AGGAGCTATAGGACCCACAGG 60.133 57.143 1.04 0.00 40.04 4.00
39 40 2.243810 GAGGAGCTATAGGACCCACAG 58.756 57.143 1.04 0.00 0.00 3.66
40 41 1.573857 TGAGGAGCTATAGGACCCACA 59.426 52.381 1.04 0.00 0.00 4.17
41 42 2.383442 TGAGGAGCTATAGGACCCAC 57.617 55.000 1.04 0.00 0.00 4.61
42 43 3.142977 AGAATGAGGAGCTATAGGACCCA 59.857 47.826 1.04 0.00 0.00 4.51
43 44 3.785364 AGAATGAGGAGCTATAGGACCC 58.215 50.000 1.04 0.00 0.00 4.46
44 45 5.576128 AGTAGAATGAGGAGCTATAGGACC 58.424 45.833 1.04 0.00 0.00 4.46
45 46 5.650703 GGAGTAGAATGAGGAGCTATAGGAC 59.349 48.000 1.04 0.00 0.00 3.85
46 47 5.313506 TGGAGTAGAATGAGGAGCTATAGGA 59.686 44.000 1.04 0.00 0.00 2.94
47 48 5.575157 TGGAGTAGAATGAGGAGCTATAGG 58.425 45.833 1.04 0.00 0.00 2.57
48 49 5.125417 GCTGGAGTAGAATGAGGAGCTATAG 59.875 48.000 0.00 0.00 0.00 1.31
49 50 5.013547 GCTGGAGTAGAATGAGGAGCTATA 58.986 45.833 0.00 0.00 0.00 1.31
50 51 3.831911 GCTGGAGTAGAATGAGGAGCTAT 59.168 47.826 0.00 0.00 0.00 2.97
101 102 2.181584 GTCTCATGGACGTCGAGGT 58.818 57.895 11.12 11.12 35.07 3.85
109 110 2.951745 CGAGCGCGTCTCATGGAC 60.952 66.667 23.57 0.00 41.98 4.02
127 128 0.518636 CCACTTTGTCGACATGCAGG 59.481 55.000 20.80 15.21 0.00 4.85
131 132 2.733552 CTCAGTCCACTTTGTCGACATG 59.266 50.000 20.80 17.21 0.00 3.21
210 211 4.871933 ACACATGACAGTCTATGACACA 57.128 40.909 15.73 0.00 36.41 3.72
222 223 7.383843 CACACTACTACAAACATACACATGACA 59.616 37.037 0.00 0.00 35.96 3.58
223 224 7.384115 ACACACTACTACAAACATACACATGAC 59.616 37.037 0.00 0.00 35.96 3.06
242 243 6.463360 TCATTCAATCAAGCACTACACACTA 58.537 36.000 0.00 0.00 0.00 2.74
270 271 1.665169 CAAGGCAACAACACAAAAGGC 59.335 47.619 0.00 0.00 41.41 4.35
300 301 5.638657 TGGATGCAAATCACAAATAACAAGC 59.361 36.000 0.00 0.00 0.00 4.01
308 309 3.896888 AGGAACTGGATGCAAATCACAAA 59.103 39.130 0.00 0.00 37.18 2.83
322 323 3.502123 TGTTAAGGTCCAAGGAACTGG 57.498 47.619 7.56 0.00 42.03 4.00
323 324 5.770162 AGATTTGTTAAGGTCCAAGGAACTG 59.230 40.000 7.56 0.00 42.03 3.16
331 332 5.235516 GTCTTCGAGATTTGTTAAGGTCCA 58.764 41.667 0.00 0.00 0.00 4.02
332 333 4.326548 CGTCTTCGAGATTTGTTAAGGTCC 59.673 45.833 0.00 0.00 39.71 4.46
334 335 5.130292 TCGTCTTCGAGATTTGTTAAGGT 57.870 39.130 0.00 0.00 41.35 3.50
351 352 3.522553 CCCGCTTAAGAAAATCTCGTCT 58.477 45.455 6.67 0.00 0.00 4.18
369 370 3.057386 GGGTTGTTACAAAATGTACCCCG 60.057 47.826 8.99 0.00 32.31 5.73
644 991 6.830912 AGTTATAGTGCATCAGGAGCATTTA 58.169 36.000 0.00 0.00 44.79 1.40
810 1162 9.901172 AGGAAAACTAGGGTTGTACTTATAATG 57.099 33.333 0.00 0.00 29.85 1.90
838 1190 6.127083 TGGAAAAGCTTCAGAATTTTTGGAGT 60.127 34.615 0.00 0.00 32.75 3.85
901 1254 0.742505 AGATGCAAATGTGGCCGATG 59.257 50.000 0.00 0.00 0.00 3.84
905 1258 0.810648 TCGAAGATGCAAATGTGGCC 59.189 50.000 0.00 0.00 0.00 5.36
909 1262 3.127548 GTGGACATCGAAGATGCAAATGT 59.872 43.478 9.67 0.00 45.12 2.71
922 1275 4.275936 GGAGGAATAATTTGGTGGACATCG 59.724 45.833 0.00 0.00 0.00 3.84
991 1344 9.726438 ACTAGTTAATGTAAGCATGAAAGAGTT 57.274 29.630 0.00 0.00 35.15 3.01
992 1345 9.726438 AACTAGTTAATGTAAGCATGAAAGAGT 57.274 29.630 6.26 0.00 35.15 3.24
1028 1381 8.720562 GGGTTATAGTTAAAGCAACGAGTAAAA 58.279 33.333 0.00 0.00 42.35 1.52
1029 1382 7.334171 GGGGTTATAGTTAAAGCAACGAGTAAA 59.666 37.037 0.00 0.00 42.35 2.01
1030 1383 6.818142 GGGGTTATAGTTAAAGCAACGAGTAA 59.182 38.462 0.00 0.00 42.35 2.24
1031 1384 6.070881 TGGGGTTATAGTTAAAGCAACGAGTA 60.071 38.462 0.00 0.00 42.35 2.59
1032 1385 5.181009 GGGGTTATAGTTAAAGCAACGAGT 58.819 41.667 0.00 0.00 42.35 4.18
1033 1386 5.180271 TGGGGTTATAGTTAAAGCAACGAG 58.820 41.667 0.00 0.00 42.35 4.18
1034 1387 5.163281 TGGGGTTATAGTTAAAGCAACGA 57.837 39.130 0.00 0.00 42.35 3.85
1035 1388 4.201881 GCTGGGGTTATAGTTAAAGCAACG 60.202 45.833 0.00 0.00 42.35 4.10
1036 1389 4.948004 AGCTGGGGTTATAGTTAAAGCAAC 59.052 41.667 0.00 0.00 37.41 4.17
1037 1390 5.045140 AGAGCTGGGGTTATAGTTAAAGCAA 60.045 40.000 0.00 0.00 31.85 3.91
1038 1391 4.473559 AGAGCTGGGGTTATAGTTAAAGCA 59.526 41.667 0.00 0.00 31.85 3.91
1039 1392 5.037383 AGAGCTGGGGTTATAGTTAAAGC 57.963 43.478 0.00 0.00 0.00 3.51
1044 1397 8.164070 CCAATAAATAGAGCTGGGGTTATAGTT 58.836 37.037 0.00 0.00 0.00 2.24
1045 1398 7.257053 CCCAATAAATAGAGCTGGGGTTATAGT 60.257 40.741 0.00 0.00 42.68 2.12
1046 1399 7.112779 CCCAATAAATAGAGCTGGGGTTATAG 58.887 42.308 0.00 0.00 42.68 1.31
1047 1400 7.027874 CCCAATAAATAGAGCTGGGGTTATA 57.972 40.000 0.00 0.00 42.68 0.98
1048 1401 5.892348 CCCAATAAATAGAGCTGGGGTTAT 58.108 41.667 0.00 0.00 42.68 1.89
1049 1402 5.319043 CCCAATAAATAGAGCTGGGGTTA 57.681 43.478 0.00 0.00 42.68 2.85
1050 1403 4.016572 AACCCAATAAATAGAGCTGGGGTT 60.017 41.667 10.10 5.96 45.33 4.11
1051 1404 3.884037 CCCAATAAATAGAGCTGGGGT 57.116 47.619 0.00 0.00 42.68 4.95
1054 1407 5.652014 TGTTCAACCCAATAAATAGAGCTGG 59.348 40.000 0.00 0.00 0.00 4.85
1055 1408 6.757897 TGTTCAACCCAATAAATAGAGCTG 57.242 37.500 0.00 0.00 0.00 4.24
1056 1409 7.175104 TCTTGTTCAACCCAATAAATAGAGCT 58.825 34.615 0.00 0.00 0.00 4.09
1057 1410 7.391148 TCTTGTTCAACCCAATAAATAGAGC 57.609 36.000 0.00 0.00 0.00 4.09
1059 1412 9.967451 TGTATCTTGTTCAACCCAATAAATAGA 57.033 29.630 0.00 0.00 0.00 1.98
1061 1414 8.962679 GGTGTATCTTGTTCAACCCAATAAATA 58.037 33.333 0.00 0.00 0.00 1.40
1062 1415 7.673926 AGGTGTATCTTGTTCAACCCAATAAAT 59.326 33.333 0.00 0.00 0.00 1.40
1063 1416 7.007723 AGGTGTATCTTGTTCAACCCAATAAA 58.992 34.615 0.00 0.00 0.00 1.40
1064 1417 6.548321 AGGTGTATCTTGTTCAACCCAATAA 58.452 36.000 0.00 0.00 0.00 1.40
1065 1418 6.134535 AGGTGTATCTTGTTCAACCCAATA 57.865 37.500 0.00 0.00 0.00 1.90
1066 1419 4.998051 AGGTGTATCTTGTTCAACCCAAT 58.002 39.130 0.00 0.00 0.00 3.16
1067 1420 4.447138 AGGTGTATCTTGTTCAACCCAA 57.553 40.909 0.00 0.00 0.00 4.12
1068 1421 4.447138 AAGGTGTATCTTGTTCAACCCA 57.553 40.909 0.00 0.00 0.00 4.51
1069 1422 7.175990 TCAAATAAGGTGTATCTTGTTCAACCC 59.824 37.037 0.00 0.00 29.79 4.11
1070 1423 8.106247 TCAAATAAGGTGTATCTTGTTCAACC 57.894 34.615 0.00 0.00 29.79 3.77
1076 1429 9.520515 AGTCAATTCAAATAAGGTGTATCTTGT 57.479 29.630 0.00 0.00 0.00 3.16
1077 1430 9.778993 CAGTCAATTCAAATAAGGTGTATCTTG 57.221 33.333 0.00 0.00 0.00 3.02
1078 1431 9.739276 TCAGTCAATTCAAATAAGGTGTATCTT 57.261 29.630 0.00 0.00 0.00 2.40
1079 1432 9.739276 TTCAGTCAATTCAAATAAGGTGTATCT 57.261 29.630 0.00 0.00 0.00 1.98
1123 1476 7.510343 TGAGGAATCCCAAAGAAAGATTTTTCT 59.490 33.333 5.43 5.43 43.90 2.52
1124 1477 7.600375 GTGAGGAATCCCAAAGAAAGATTTTTC 59.400 37.037 0.00 0.46 37.97 2.29
1125 1478 7.071071 TGTGAGGAATCCCAAAGAAAGATTTTT 59.929 33.333 0.00 0.00 30.52 1.94
1126 1479 6.554605 TGTGAGGAATCCCAAAGAAAGATTTT 59.445 34.615 0.00 0.00 30.52 1.82
1127 1480 6.077322 TGTGAGGAATCCCAAAGAAAGATTT 58.923 36.000 0.00 0.00 30.52 2.17
1128 1481 5.644188 TGTGAGGAATCCCAAAGAAAGATT 58.356 37.500 0.00 0.00 33.01 2.40
1129 1482 5.261040 TGTGAGGAATCCCAAAGAAAGAT 57.739 39.130 0.00 0.00 33.88 2.40
1130 1483 4.722526 TGTGAGGAATCCCAAAGAAAGA 57.277 40.909 0.00 0.00 33.88 2.52
1131 1484 5.713861 AGAATGTGAGGAATCCCAAAGAAAG 59.286 40.000 0.00 0.00 33.88 2.62
1132 1485 5.644188 AGAATGTGAGGAATCCCAAAGAAA 58.356 37.500 0.00 0.00 33.88 2.52
1133 1486 5.261040 AGAATGTGAGGAATCCCAAAGAA 57.739 39.130 0.00 0.00 33.88 2.52
1134 1487 4.934797 AGAATGTGAGGAATCCCAAAGA 57.065 40.909 0.00 0.00 33.88 2.52
1135 1488 6.261826 GTCATAGAATGTGAGGAATCCCAAAG 59.738 42.308 0.00 0.00 33.88 2.77
1136 1489 6.069440 AGTCATAGAATGTGAGGAATCCCAAA 60.069 38.462 0.00 0.00 33.88 3.28
1137 1490 5.429762 AGTCATAGAATGTGAGGAATCCCAA 59.570 40.000 0.00 0.00 33.88 4.12
1138 1491 4.971282 AGTCATAGAATGTGAGGAATCCCA 59.029 41.667 0.00 0.00 33.88 4.37
1139 1492 5.559148 AGTCATAGAATGTGAGGAATCCC 57.441 43.478 0.00 0.00 0.00 3.85
1140 1493 7.872113 AAAAGTCATAGAATGTGAGGAATCC 57.128 36.000 0.00 0.00 0.00 3.01
1162 1515 6.941857 AGGAAAAACTTGTTAGCTGGAAAAA 58.058 32.000 0.00 0.00 0.00 1.94
1163 1516 6.538945 AGGAAAAACTTGTTAGCTGGAAAA 57.461 33.333 0.00 0.00 0.00 2.29
1164 1517 6.379988 AGAAGGAAAAACTTGTTAGCTGGAAA 59.620 34.615 0.00 0.00 0.00 3.13
1165 1518 5.891551 AGAAGGAAAAACTTGTTAGCTGGAA 59.108 36.000 0.00 0.00 0.00 3.53
1166 1519 5.299279 CAGAAGGAAAAACTTGTTAGCTGGA 59.701 40.000 0.00 0.00 0.00 3.86
1167 1520 5.507985 CCAGAAGGAAAAACTTGTTAGCTGG 60.508 44.000 0.00 0.00 36.89 4.85
1168 1521 5.523369 CCAGAAGGAAAAACTTGTTAGCTG 58.477 41.667 0.00 0.00 36.89 4.24
1169 1522 4.038042 GCCAGAAGGAAAAACTTGTTAGCT 59.962 41.667 0.00 0.00 36.89 3.32
1170 1523 4.202111 TGCCAGAAGGAAAAACTTGTTAGC 60.202 41.667 0.00 0.00 36.89 3.09
1171 1524 5.514274 TGCCAGAAGGAAAAACTTGTTAG 57.486 39.130 0.00 0.00 36.89 2.34
1188 1541 1.698506 TGGTAAGGTTGGTTTGCCAG 58.301 50.000 0.00 0.00 46.91 4.85
1191 1544 5.185056 AGTTATGATGGTAAGGTTGGTTTGC 59.815 40.000 0.00 0.00 0.00 3.68
1203 1556 7.512402 TCTCATTGGATGGTAGTTATGATGGTA 59.488 37.037 0.00 0.00 0.00 3.25
1206 1559 7.448420 AGTCTCATTGGATGGTAGTTATGATG 58.552 38.462 0.00 0.00 0.00 3.07
1217 1570 6.183361 TGGTAGTATGAAGTCTCATTGGATGG 60.183 42.308 0.00 0.00 39.36 3.51
1230 1583 6.127054 TGGACCTGAGATTTGGTAGTATGAAG 60.127 42.308 0.00 0.00 36.59 3.02
1309 1662 7.253750 GCAAGTTCAGCAAATTACCAAATATCG 60.254 37.037 0.00 0.00 0.00 2.92
1322 1675 1.471327 GCCAAGTGCAAGTTCAGCAAA 60.471 47.619 0.00 0.00 44.64 3.68
1328 1681 3.045601 TCTAGAGCCAAGTGCAAGTTC 57.954 47.619 0.00 0.00 44.83 3.01
1358 1711 5.388654 AGAGATGATGGTCAAGTTGGTTTT 58.611 37.500 2.34 0.00 0.00 2.43
1382 1735 2.730928 GGATGGTGTTTGTTTGCAATCG 59.269 45.455 0.00 0.00 34.18 3.34
1384 1737 4.343526 TGTAGGATGGTGTTTGTTTGCAAT 59.656 37.500 0.00 0.00 34.18 3.56
1405 1758 5.010922 TGGTTTTCTGCTGCTGATATTTTGT 59.989 36.000 10.09 0.00 0.00 2.83
1406 1759 5.346822 GTGGTTTTCTGCTGCTGATATTTTG 59.653 40.000 10.09 0.00 0.00 2.44
1412 1765 1.251251 GGTGGTTTTCTGCTGCTGAT 58.749 50.000 10.09 0.00 0.00 2.90
1416 1769 0.823356 TCAGGGTGGTTTTCTGCTGC 60.823 55.000 0.00 0.00 0.00 5.25
1434 1787 2.030457 CGACGAATTGCCAATGTACCTC 59.970 50.000 0.00 0.00 0.00 3.85
1436 1789 2.004017 TCGACGAATTGCCAATGTACC 58.996 47.619 0.00 0.00 0.00 3.34
1437 1790 2.536928 GCTCGACGAATTGCCAATGTAC 60.537 50.000 0.00 0.00 0.00 2.90
1438 1791 1.663643 GCTCGACGAATTGCCAATGTA 59.336 47.619 0.00 0.00 0.00 2.29
1439 1792 0.447801 GCTCGACGAATTGCCAATGT 59.552 50.000 0.00 0.00 0.00 2.71
1440 1793 0.447406 TGCTCGACGAATTGCCAATG 59.553 50.000 0.00 0.00 0.00 2.82
1441 1794 0.447801 GTGCTCGACGAATTGCCAAT 59.552 50.000 0.00 0.00 0.00 3.16
1442 1795 1.866237 GTGCTCGACGAATTGCCAA 59.134 52.632 0.00 0.00 0.00 4.52
1443 1796 3.561429 GTGCTCGACGAATTGCCA 58.439 55.556 0.00 0.00 0.00 4.92
1459 1812 1.758319 CTTGGACACGCACGAAACGT 61.758 55.000 0.00 0.00 46.42 3.99
1460 1813 1.083657 CTTGGACACGCACGAAACG 60.084 57.895 0.00 0.00 0.00 3.60
1461 1814 1.278637 CCTTGGACACGCACGAAAC 59.721 57.895 0.00 0.00 0.00 2.78
1462 1815 2.539338 GCCTTGGACACGCACGAAA 61.539 57.895 0.00 0.00 0.00 3.46
1463 1816 2.970324 GCCTTGGACACGCACGAA 60.970 61.111 0.00 0.00 0.00 3.85
1464 1817 4.228567 TGCCTTGGACACGCACGA 62.229 61.111 0.00 0.00 0.00 4.35
1493 1857 0.617820 GGGGAGGTAACAGGAGCTCA 60.618 60.000 17.19 0.00 44.19 4.26
1503 1867 2.204074 TGCAGGCAGGGGAGGTAA 60.204 61.111 0.00 0.00 0.00 2.85
1504 1868 3.009115 GTGCAGGCAGGGGAGGTA 61.009 66.667 0.00 0.00 0.00 3.08
1511 1886 4.729918 GAGTGGGGTGCAGGCAGG 62.730 72.222 0.00 0.00 0.00 4.85
1515 1890 2.273449 GATGGAGTGGGGTGCAGG 59.727 66.667 0.00 0.00 0.00 4.85
1592 1967 2.203252 CGGGCATGGATGGTGGAG 60.203 66.667 0.00 0.00 0.00 3.86
1610 1985 2.512974 GACGGTAACCATGGGCGG 60.513 66.667 18.09 12.19 0.00 6.13
1673 2048 2.280552 TTACGCACGGGAGGAGCTT 61.281 57.895 0.00 0.00 33.62 3.74
1726 2101 0.034767 AGACGAGGTCGGTATGTGGA 60.035 55.000 4.13 0.00 44.95 4.02
1731 2106 1.539929 CGAGGTAGACGAGGTCGGTAT 60.540 57.143 4.13 0.00 44.95 2.73
1743 2118 2.753043 GGACGGTGGCGAGGTAGA 60.753 66.667 0.00 0.00 0.00 2.59
1757 2132 3.420839 CCATAAATGGCAAACGAGGAC 57.579 47.619 0.00 0.00 41.75 3.85
1808 2183 3.469863 AAGACCACGCGCCTTGGAA 62.470 57.895 25.59 0.00 37.58 3.53
1809 2184 3.876589 GAAGACCACGCGCCTTGGA 62.877 63.158 25.59 0.00 37.58 3.53
1838 2217 2.123597 AATGATGGCAGGGCGCAT 60.124 55.556 10.83 0.00 45.17 4.73
1839 2218 3.142162 CAATGATGGCAGGGCGCA 61.142 61.111 10.83 0.00 45.17 6.09
1858 2237 4.451150 TGTGGATGGCGGCGTCTC 62.451 66.667 27.81 20.91 0.00 3.36
1866 2245 1.819632 GATGGTCGGTGTGGATGGC 60.820 63.158 0.00 0.00 0.00 4.40
1869 2248 1.602237 GTGGATGGTCGGTGTGGAT 59.398 57.895 0.00 0.00 0.00 3.41
1873 2252 1.072505 GTTGGTGGATGGTCGGTGT 59.927 57.895 0.00 0.00 0.00 4.16
1883 2262 2.112297 GCCGTTCAGGTTGGTGGA 59.888 61.111 0.00 0.00 43.70 4.02
1889 2268 2.147387 AGGTGAGGCCGTTCAGGTT 61.147 57.895 0.00 0.00 43.70 3.50
1925 2304 0.583438 CGAAGATAAGCATGGCGGTG 59.417 55.000 0.00 0.00 0.00 4.94
1926 2305 0.532862 CCGAAGATAAGCATGGCGGT 60.533 55.000 0.00 0.00 33.14 5.68
1936 2315 1.713937 TACGCGACGCCCGAAGATAA 61.714 55.000 15.93 0.00 41.76 1.75
1949 2328 1.503542 GAGAAGGTCGGTTACGCGA 59.496 57.895 15.93 0.00 40.69 5.87
1951 2330 1.515736 CGGAGAAGGTCGGTTACGC 60.516 63.158 0.00 0.00 40.69 4.42
1952 2331 1.138247 CCGGAGAAGGTCGGTTACG 59.862 63.158 0.00 0.00 41.23 3.18
1958 2337 4.673441 CATTATATAGCCGGAGAAGGTCG 58.327 47.826 5.05 0.00 0.00 4.79
1959 2338 4.434520 GCATTATATAGCCGGAGAAGGTC 58.565 47.826 5.05 0.00 0.00 3.85
1960 2339 3.197983 GGCATTATATAGCCGGAGAAGGT 59.802 47.826 5.05 0.00 41.70 3.50
1961 2340 3.798202 GGCATTATATAGCCGGAGAAGG 58.202 50.000 5.05 0.00 41.70 3.46
1970 2349 3.118956 AGCTCGAGGTGGCATTATATAGC 60.119 47.826 17.85 0.00 0.00 2.97
1971 2350 4.677584 GAGCTCGAGGTGGCATTATATAG 58.322 47.826 23.97 0.00 0.00 1.31
1972 2351 3.128764 CGAGCTCGAGGTGGCATTATATA 59.871 47.826 32.06 0.00 43.02 0.86
1973 2352 2.094494 CGAGCTCGAGGTGGCATTATAT 60.094 50.000 32.06 0.00 43.02 0.86
1974 2353 1.269723 CGAGCTCGAGGTGGCATTATA 59.730 52.381 32.06 0.00 43.02 0.98
1975 2354 0.032678 CGAGCTCGAGGTGGCATTAT 59.967 55.000 32.06 0.00 43.02 1.28
1976 2355 1.437573 CGAGCTCGAGGTGGCATTA 59.562 57.895 32.06 0.00 43.02 1.90
1977 2356 2.185350 CGAGCTCGAGGTGGCATT 59.815 61.111 32.06 0.00 43.02 3.56
1978 2357 4.521062 GCGAGCTCGAGGTGGCAT 62.521 66.667 36.34 6.42 44.72 4.40
1980 2359 3.518998 TAGCGAGCTCGAGGTGGC 61.519 66.667 38.74 35.11 45.50 5.01
1981 2360 2.409651 GTAGCGAGCTCGAGGTGG 59.590 66.667 38.74 22.11 43.02 4.61
1982 2361 2.023461 CGTAGCGAGCTCGAGGTG 59.977 66.667 38.74 20.62 43.02 4.00
1995 2374 1.732259 GGATTGTGGTGAAGTGCGTAG 59.268 52.381 0.00 0.00 0.00 3.51
1998 2377 0.606401 AGGGATTGTGGTGAAGTGCG 60.606 55.000 0.00 0.00 0.00 5.34
2001 2380 3.498661 GGAAGAAGGGATTGTGGTGAAGT 60.499 47.826 0.00 0.00 0.00 3.01
2021 2400 0.627451 TACGGGAGGCTTACAGAGGA 59.373 55.000 0.00 0.00 0.00 3.71
2023 2402 1.033574 CCTACGGGAGGCTTACAGAG 58.966 60.000 0.00 0.00 38.96 3.35
2052 2431 0.183014 TTAGGGTTTCGGCACCAACA 59.817 50.000 6.31 0.00 38.79 3.33
2053 2432 1.001048 GTTTAGGGTTTCGGCACCAAC 60.001 52.381 6.31 0.00 38.79 3.77
2054 2433 1.320507 GTTTAGGGTTTCGGCACCAA 58.679 50.000 6.31 0.00 38.79 3.67
2055 2434 0.537828 GGTTTAGGGTTTCGGCACCA 60.538 55.000 6.31 0.00 38.79 4.17
2056 2435 1.246056 GGGTTTAGGGTTTCGGCACC 61.246 60.000 0.00 0.00 35.88 5.01
2057 2436 0.251033 AGGGTTTAGGGTTTCGGCAC 60.251 55.000 0.00 0.00 0.00 5.01
2058 2437 1.279846 CTAGGGTTTAGGGTTTCGGCA 59.720 52.381 0.00 0.00 0.00 5.69
2059 2438 2.015588 GCTAGGGTTTAGGGTTTCGGC 61.016 57.143 0.00 0.00 0.00 5.54
2060 2439 1.407851 GGCTAGGGTTTAGGGTTTCGG 60.408 57.143 0.00 0.00 0.00 4.30
2061 2440 1.558294 AGGCTAGGGTTTAGGGTTTCG 59.442 52.381 0.00 0.00 0.00 3.46
2062 2441 2.944542 GCAGGCTAGGGTTTAGGGTTTC 60.945 54.545 0.00 0.00 0.00 2.78
2063 2442 1.005569 GCAGGCTAGGGTTTAGGGTTT 59.994 52.381 0.00 0.00 0.00 3.27
2064 2443 0.624254 GCAGGCTAGGGTTTAGGGTT 59.376 55.000 0.00 0.00 0.00 4.11
2065 2444 1.279749 GGCAGGCTAGGGTTTAGGGT 61.280 60.000 0.00 0.00 0.00 4.34
2066 2445 1.532238 GGCAGGCTAGGGTTTAGGG 59.468 63.158 0.00 0.00 0.00 3.53
2067 2446 0.988678 AGGGCAGGCTAGGGTTTAGG 60.989 60.000 0.00 0.00 0.00 2.69
2068 2447 1.694696 CTAGGGCAGGCTAGGGTTTAG 59.305 57.143 0.00 0.00 0.00 1.85
2069 2448 1.802553 CTAGGGCAGGCTAGGGTTTA 58.197 55.000 0.00 0.00 0.00 2.01
2070 2449 1.636769 GCTAGGGCAGGCTAGGGTTT 61.637 60.000 0.00 0.00 38.54 3.27
2071 2450 2.073101 GCTAGGGCAGGCTAGGGTT 61.073 63.158 0.00 0.00 38.54 4.11
2072 2451 2.446802 GCTAGGGCAGGCTAGGGT 60.447 66.667 0.00 0.00 38.54 4.34
2073 2452 2.122636 AGCTAGGGCAGGCTAGGG 60.123 66.667 0.00 0.00 41.70 3.53
2074 2453 0.113385 TAGAGCTAGGGCAGGCTAGG 59.887 60.000 0.00 0.00 41.70 3.02
2075 2454 1.253100 GTAGAGCTAGGGCAGGCTAG 58.747 60.000 0.00 0.00 41.70 3.42
2076 2455 0.178958 GGTAGAGCTAGGGCAGGCTA 60.179 60.000 0.00 0.00 41.70 3.93
2077 2456 1.458588 GGTAGAGCTAGGGCAGGCT 60.459 63.158 0.00 0.00 41.70 4.58
2078 2457 3.143338 GGTAGAGCTAGGGCAGGC 58.857 66.667 0.00 0.00 41.70 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.