Multiple sequence alignment - TraesCS1B01G360600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G360600 chr1B 100.000 4874 0 0 1 4874 589065624 589070497 0.000000e+00 9001.0
1 TraesCS1B01G360600 chr1B 93.750 240 14 1 451 690 334234522 334234284 4.640000e-95 359.0
2 TraesCS1B01G360600 chr1B 84.034 238 35 3 3767 4004 589131806 589132040 4.910000e-55 226.0
3 TraesCS1B01G360600 chr1B 93.878 49 2 1 4191 4238 589069919 589069967 6.770000e-09 73.1
4 TraesCS1B01G360600 chr1A 95.465 2249 64 6 1765 4013 533144011 533146221 0.000000e+00 3554.0
5 TraesCS1B01G360600 chr1A 93.045 949 35 13 841 1767 533142845 533143784 0.000000e+00 1358.0
6 TraesCS1B01G360600 chr1A 88.571 315 31 4 2459 2770 412466770 412467082 1.280000e-100 377.0
7 TraesCS1B01G360600 chr1A 95.122 164 6 2 1 164 245126056 245125895 1.740000e-64 257.0
8 TraesCS1B01G360600 chr1D 94.849 1592 59 5 2474 4062 435753473 435755044 0.000000e+00 2464.0
9 TraesCS1B01G360600 chr1D 91.621 1098 42 20 689 1767 435751516 435752582 0.000000e+00 1472.0
10 TraesCS1B01G360600 chr1D 96.847 666 19 2 1765 2428 435752808 435753473 0.000000e+00 1112.0
11 TraesCS1B01G360600 chr1D 90.878 581 25 12 4322 4874 435755544 435756124 0.000000e+00 754.0
12 TraesCS1B01G360600 chr1D 89.404 302 27 4 2459 2758 326292007 326292305 4.610000e-100 375.0
13 TraesCS1B01G360600 chr1D 87.059 255 20 7 155 404 435750973 435751219 4.810000e-70 276.0
14 TraesCS1B01G360600 chr1D 97.368 114 3 0 4092 4205 435755044 435755157 1.380000e-45 195.0
15 TraesCS1B01G360600 chr1D 92.857 70 5 0 4249 4318 435755135 435755204 8.630000e-18 102.0
16 TraesCS1B01G360600 chr4D 94.581 406 12 4 4472 4874 138704041 138703643 1.930000e-173 619.0
17 TraesCS1B01G360600 chr4D 88.199 322 29 7 2459 2773 211388018 211388337 4.610000e-100 375.0
18 TraesCS1B01G360600 chr4D 88.406 207 15 4 4007 4205 138705201 138704996 1.750000e-59 241.0
19 TraesCS1B01G360600 chr4D 90.370 135 11 2 4320 4452 362219773 362219639 5.010000e-40 176.0
20 TraesCS1B01G360600 chr4D 94.444 36 2 0 4271 4306 85007133 85007168 6.820000e-04 56.5
21 TraesCS1B01G360600 chr4A 94.428 341 13 2 4471 4811 415857340 415857674 2.010000e-143 520.0
22 TraesCS1B01G360600 chr4A 88.073 327 33 5 2452 2773 512543179 512543504 2.750000e-102 383.0
23 TraesCS1B01G360600 chr4A 93.333 165 10 1 4710 4874 415857718 415857881 4.870000e-60 243.0
24 TraesCS1B01G360600 chr4A 93.617 141 7 1 4055 4193 415855871 415856011 4.940000e-50 209.0
25 TraesCS1B01G360600 chr4A 92.157 102 7 1 4710 4811 415857646 415857746 5.090000e-30 143.0
26 TraesCS1B01G360600 chr3A 88.785 321 25 9 2456 2772 164407652 164407965 2.750000e-102 383.0
27 TraesCS1B01G360600 chr4B 88.474 321 28 7 2459 2772 282886351 282886669 3.560000e-101 379.0
28 TraesCS1B01G360600 chr4B 87.227 321 31 8 2460 2773 107453331 107453014 1.670000e-94 357.0
29 TraesCS1B01G360600 chr4B 90.272 257 21 4 438 693 598385150 598384897 2.810000e-87 333.0
30 TraesCS1B01G360600 chr4B 91.083 157 11 2 4051 4204 227301324 227301168 4.940000e-50 209.0
31 TraesCS1B01G360600 chr4B 89.583 48 5 0 4271 4318 122218068 122218115 1.460000e-05 62.1
32 TraesCS1B01G360600 chr6B 92.213 244 17 2 448 690 504600667 504600909 1.300000e-90 344.0
33 TraesCS1B01G360600 chr3D 90.945 254 20 3 440 691 583710026 583710278 6.040000e-89 339.0
34 TraesCS1B01G360600 chr3D 89.922 258 23 3 435 690 429626225 429626481 3.640000e-86 329.0
35 TraesCS1B01G360600 chr3B 90.310 258 21 4 440 696 391567692 391567438 7.820000e-88 335.0
36 TraesCS1B01G360600 chr3B 94.578 166 7 2 1 165 451856932 451856768 6.260000e-64 255.0
37 TraesCS1B01G360600 chrUn 90.272 257 22 3 440 696 94329514 94329767 2.810000e-87 333.0
38 TraesCS1B01G360600 chrUn 89.922 258 23 3 439 696 94342206 94342460 3.640000e-86 329.0
39 TraesCS1B01G360600 chrUn 89.922 258 23 3 439 696 366100603 366100857 3.640000e-86 329.0
40 TraesCS1B01G360600 chrUn 93.605 172 8 2 1 172 433586180 433586012 2.250000e-63 254.0
41 TraesCS1B01G360600 chrUn 90.370 135 11 2 4320 4452 468072624 468072490 5.010000e-40 176.0
42 TraesCS1B01G360600 chr5A 93.820 178 10 1 1 178 295167183 295167359 2.890000e-67 267.0
43 TraesCS1B01G360600 chr2A 97.419 155 4 0 1 155 342482318 342482164 1.040000e-66 265.0
44 TraesCS1B01G360600 chr2A 93.130 131 9 0 4322 4452 324615070 324614940 4.980000e-45 193.0
45 TraesCS1B01G360600 chr2A 95.122 41 2 0 4274 4314 504339075 504339115 1.130000e-06 65.8
46 TraesCS1B01G360600 chr5D 93.605 172 10 1 1 171 68285697 68285868 6.260000e-64 255.0
47 TraesCS1B01G360600 chr5D 93.567 171 8 2 1 171 509347006 509347173 8.100000e-63 252.0
48 TraesCS1B01G360600 chr5D 90.370 135 11 2 4320 4452 471161434 471161300 5.010000e-40 176.0
49 TraesCS1B01G360600 chr6D 91.304 184 12 4 1 181 431226165 431225983 1.050000e-61 248.0
50 TraesCS1B01G360600 chr6D 90.370 135 11 2 4320 4452 441944673 441944539 5.010000e-40 176.0
51 TraesCS1B01G360600 chr6D 97.727 44 1 0 4275 4318 61192512 61192469 5.230000e-10 76.8
52 TraesCS1B01G360600 chr6D 90.476 42 4 0 4275 4316 81743014 81743055 6.820000e-04 56.5
53 TraesCS1B01G360600 chr7D 91.620 179 11 3 1 179 461466258 461466432 1.360000e-60 244.0
54 TraesCS1B01G360600 chr2D 93.130 131 9 0 4322 4452 218046843 218046973 4.980000e-45 193.0
55 TraesCS1B01G360600 chr2D 91.603 131 11 0 4322 4452 299891570 299891700 1.080000e-41 182.0
56 TraesCS1B01G360600 chr2D 95.238 42 2 0 4274 4315 372929903 372929862 3.150000e-07 67.6
57 TraesCS1B01G360600 chr5B 90.299 134 12 1 4322 4454 554821047 554821180 1.800000e-39 174.0
58 TraesCS1B01G360600 chr5B 85.185 54 7 1 4255 4308 477642649 477642597 2.000000e-03 54.7
59 TraesCS1B01G360600 chr7B 84.848 66 6 4 4271 4333 15038182 15038118 4.070000e-06 63.9
60 TraesCS1B01G360600 chr7A 84.615 65 8 2 4271 4333 77202223 77202159 4.070000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G360600 chr1B 589065624 589070497 4873 False 4537.050000 9001 96.939000 1 4874 2 chr1B.!!$F2 4873
1 TraesCS1B01G360600 chr1A 533142845 533146221 3376 False 2456.000000 3554 94.255000 841 4013 2 chr1A.!!$F2 3172
2 TraesCS1B01G360600 chr1D 435750973 435756124 5151 False 910.714286 2464 93.068429 155 4874 7 chr1D.!!$F2 4719
3 TraesCS1B01G360600 chr4D 138703643 138705201 1558 True 430.000000 619 91.493500 4007 4874 2 chr4D.!!$R2 867
4 TraesCS1B01G360600 chr4A 415855871 415857881 2010 False 278.750000 520 93.383750 4055 4874 4 chr4A.!!$F2 819

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
493 759 0.037590 AGTTAAGCATGGCAACCCGA 59.962 50.000 0.0 0.0 0.00 5.14 F
500 766 0.247185 CATGGCAACCCGAATGCTTT 59.753 50.000 0.0 0.0 43.34 3.51 F
643 909 0.309302 TGCCATGTCAAAACGTTCGG 59.691 50.000 0.0 0.0 0.00 4.30 F
644 910 0.386731 GCCATGTCAAAACGTTCGGG 60.387 55.000 0.0 0.0 0.00 5.14 F
775 1042 0.543277 CTCTGGCTGTCAATGGGCTA 59.457 55.000 0.0 0.0 0.00 3.93 F
1478 1779 0.836606 TCCGGCATTATCTTGGCAGA 59.163 50.000 0.0 0.0 41.97 4.26 F
1479 1780 1.202687 TCCGGCATTATCTTGGCAGAG 60.203 52.381 0.0 0.0 41.97 3.35 F
2651 3231 1.339929 GTTGAATGTTGTGGTGGGTCC 59.660 52.381 0.0 0.0 0.00 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1359 1654 0.398696 ATGTAACAGAACGGCCACCA 59.601 50.000 2.24 0.00 0.0 4.17 R
2461 2994 0.469917 CAACGCATGGGGTATCCTCT 59.530 55.000 14.94 0.00 36.2 3.69 R
2463 2996 1.152963 GCAACGCATGGGGTATCCT 60.153 57.895 14.94 0.00 36.2 3.24 R
2464 2997 1.152963 AGCAACGCATGGGGTATCC 60.153 57.895 14.94 0.00 0.0 2.59 R
2465 2998 2.024918 CAGCAACGCATGGGGTATC 58.975 57.895 14.94 3.03 0.0 2.24 R
3113 3695 1.953559 TCTCCACAGCTTGTTGTCAC 58.046 50.000 0.00 0.00 0.0 3.67 R
3408 3990 1.971481 TGCTCTATTTGATGCGGCAT 58.029 45.000 16.65 16.65 0.0 4.40 R
4452 5751 0.608640 GTGTACTACTGCAGCCCACT 59.391 55.000 15.27 0.00 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.406512 AGAGGCTTACTAGGGACATGT 57.593 47.619 0.00 0.00 0.00 3.21
21 22 3.725634 AGAGGCTTACTAGGGACATGTT 58.274 45.455 0.00 0.00 0.00 2.71
22 23 3.452627 AGAGGCTTACTAGGGACATGTTG 59.547 47.826 0.00 0.00 0.00 3.33
23 24 3.182152 AGGCTTACTAGGGACATGTTGT 58.818 45.455 0.00 0.00 0.00 3.32
24 25 3.055094 AGGCTTACTAGGGACATGTTGTG 60.055 47.826 0.00 0.00 0.00 3.33
25 26 3.270877 GCTTACTAGGGACATGTTGTGG 58.729 50.000 0.00 0.00 0.00 4.17
26 27 3.307480 GCTTACTAGGGACATGTTGTGGT 60.307 47.826 0.00 0.00 0.00 4.16
27 28 4.504858 CTTACTAGGGACATGTTGTGGTC 58.495 47.826 0.00 0.00 0.00 4.02
28 29 2.621070 ACTAGGGACATGTTGTGGTCT 58.379 47.619 0.00 0.00 34.49 3.85
29 30 3.786553 ACTAGGGACATGTTGTGGTCTA 58.213 45.455 0.00 0.00 34.49 2.59
30 31 4.362677 ACTAGGGACATGTTGTGGTCTAT 58.637 43.478 0.00 0.00 34.49 1.98
31 32 3.634397 AGGGACATGTTGTGGTCTATG 57.366 47.619 0.00 0.00 34.49 2.23
32 33 2.912956 AGGGACATGTTGTGGTCTATGT 59.087 45.455 0.00 0.00 36.54 2.29
33 34 4.101114 AGGGACATGTTGTGGTCTATGTA 58.899 43.478 0.00 0.00 34.18 2.29
34 35 4.721776 AGGGACATGTTGTGGTCTATGTAT 59.278 41.667 0.00 0.00 34.18 2.29
35 36 5.191722 AGGGACATGTTGTGGTCTATGTATT 59.808 40.000 0.00 0.00 34.18 1.89
36 37 5.527582 GGGACATGTTGTGGTCTATGTATTC 59.472 44.000 0.00 0.00 34.18 1.75
37 38 6.112734 GGACATGTTGTGGTCTATGTATTCA 58.887 40.000 0.00 0.00 34.18 2.57
38 39 6.037172 GGACATGTTGTGGTCTATGTATTCAC 59.963 42.308 0.00 0.00 34.18 3.18
39 40 6.472016 ACATGTTGTGGTCTATGTATTCACA 58.528 36.000 0.00 0.00 39.52 3.58
41 42 8.264347 ACATGTTGTGGTCTATGTATTCACATA 58.736 33.333 0.00 0.00 43.74 2.29
42 43 9.276590 CATGTTGTGGTCTATGTATTCACATAT 57.723 33.333 0.00 0.00 44.65 1.78
43 44 8.661352 TGTTGTGGTCTATGTATTCACATATG 57.339 34.615 0.00 0.00 44.65 1.78
44 45 8.264347 TGTTGTGGTCTATGTATTCACATATGT 58.736 33.333 1.41 1.41 44.65 2.29
45 46 9.758651 GTTGTGGTCTATGTATTCACATATGTA 57.241 33.333 8.32 0.00 44.65 2.29
58 59 7.780008 TTCACATATGTATTACGGTTTCTGG 57.220 36.000 8.32 0.00 0.00 3.86
59 60 6.880484 TCACATATGTATTACGGTTTCTGGT 58.120 36.000 8.32 0.00 0.00 4.00
60 61 7.332557 TCACATATGTATTACGGTTTCTGGTT 58.667 34.615 8.32 0.00 0.00 3.67
61 62 8.476447 TCACATATGTATTACGGTTTCTGGTTA 58.524 33.333 8.32 0.00 0.00 2.85
62 63 9.100554 CACATATGTATTACGGTTTCTGGTTAA 57.899 33.333 8.32 0.00 0.00 2.01
63 64 9.841295 ACATATGTATTACGGTTTCTGGTTAAT 57.159 29.630 6.56 0.00 0.00 1.40
67 68 9.669887 ATGTATTACGGTTTCTGGTTAATACAA 57.330 29.630 13.58 2.48 40.20 2.41
68 69 9.669887 TGTATTACGGTTTCTGGTTAATACAAT 57.330 29.630 9.11 0.00 36.55 2.71
74 75 8.833493 ACGGTTTCTGGTTAATACAATTATAGC 58.167 33.333 0.00 0.00 0.00 2.97
75 76 8.832521 CGGTTTCTGGTTAATACAATTATAGCA 58.167 33.333 0.00 0.00 0.00 3.49
141 142 6.544928 ACCAATTTATTTTTGCCTCTAGGG 57.455 37.500 0.00 0.00 35.18 3.53
162 163 6.006449 AGGGCATATTTCCAACAGATATGAC 58.994 40.000 0.00 3.86 39.81 3.06
163 164 5.769662 GGGCATATTTCCAACAGATATGACA 59.230 40.000 9.79 0.00 41.47 3.58
173 174 5.757320 CCAACAGATATGACATCCAAGAGTC 59.243 44.000 0.00 0.00 35.37 3.36
175 176 6.550938 ACAGATATGACATCCAAGAGTCAA 57.449 37.500 0.00 0.00 46.62 3.18
176 177 7.134362 ACAGATATGACATCCAAGAGTCAAT 57.866 36.000 0.00 0.00 46.62 2.57
217 218 6.369890 GTGTATATATGCTCAAGTGACATGGG 59.630 42.308 0.00 0.00 0.00 4.00
218 219 5.830799 ATATATGCTCAAGTGACATGGGA 57.169 39.130 0.00 0.00 0.00 4.37
219 220 2.414994 ATGCTCAAGTGACATGGGAG 57.585 50.000 0.00 0.00 0.00 4.30
220 221 2.475666 GCTCAAGTGACATGGGAGC 58.524 57.895 0.00 8.72 43.41 4.70
337 342 6.925610 ATTAGTCGCATAATGTTGACATGT 57.074 33.333 0.00 0.00 36.56 3.21
404 409 9.396022 ACAAAATGAGAAGAGAAGTTTTACTCA 57.604 29.630 0.00 0.00 37.33 3.41
418 684 8.751302 AAGTTTTACTCATTGTTGTTTTTCGT 57.249 26.923 0.00 0.00 0.00 3.85
428 694 1.305201 TGTTTTTCGTGTGAGCTCCC 58.695 50.000 12.15 0.00 0.00 4.30
445 711 3.224269 CTCCCCGGTTTACCAAAAAGAA 58.776 45.455 0.00 0.00 35.14 2.52
446 712 3.637694 CTCCCCGGTTTACCAAAAAGAAA 59.362 43.478 0.00 0.00 35.14 2.52
447 713 3.384146 TCCCCGGTTTACCAAAAAGAAAC 59.616 43.478 0.00 0.00 35.14 2.78
448 714 3.373849 CCCGGTTTACCAAAAAGAAACG 58.626 45.455 0.00 0.00 34.55 3.60
449 715 3.373849 CCGGTTTACCAAAAAGAAACGG 58.626 45.455 0.00 0.00 34.55 4.44
450 716 3.066481 CCGGTTTACCAAAAAGAAACGGA 59.934 43.478 5.55 0.00 36.20 4.69
451 717 4.439837 CCGGTTTACCAAAAAGAAACGGAA 60.440 41.667 5.55 0.00 36.20 4.30
452 718 5.283294 CGGTTTACCAAAAAGAAACGGAAT 58.717 37.500 0.00 0.00 36.20 3.01
453 719 5.174216 CGGTTTACCAAAAAGAAACGGAATG 59.826 40.000 0.00 0.00 36.20 2.67
454 720 6.274579 GGTTTACCAAAAAGAAACGGAATGA 58.725 36.000 0.00 0.00 34.55 2.57
455 721 6.926826 GGTTTACCAAAAAGAAACGGAATGAT 59.073 34.615 0.00 0.00 34.55 2.45
456 722 8.083462 GGTTTACCAAAAAGAAACGGAATGATA 58.917 33.333 0.00 0.00 34.55 2.15
457 723 9.465985 GTTTACCAAAAAGAAACGGAATGATAA 57.534 29.630 0.00 0.00 0.00 1.75
458 724 9.465985 TTTACCAAAAAGAAACGGAATGATAAC 57.534 29.630 0.00 0.00 0.00 1.89
459 725 7.284919 ACCAAAAAGAAACGGAATGATAACT 57.715 32.000 0.00 0.00 0.00 2.24
460 726 7.368059 ACCAAAAAGAAACGGAATGATAACTC 58.632 34.615 0.00 0.00 0.00 3.01
461 727 6.806739 CCAAAAAGAAACGGAATGATAACTCC 59.193 38.462 0.00 0.00 0.00 3.85
462 728 6.510879 AAAAGAAACGGAATGATAACTCCC 57.489 37.500 0.00 0.00 0.00 4.30
463 729 3.793559 AGAAACGGAATGATAACTCCCG 58.206 45.455 0.00 0.00 45.09 5.14
464 730 3.449737 AGAAACGGAATGATAACTCCCGA 59.550 43.478 0.00 0.00 42.49 5.14
465 731 3.899052 AACGGAATGATAACTCCCGAA 57.101 42.857 0.00 0.00 42.49 4.30
466 732 3.175109 ACGGAATGATAACTCCCGAAC 57.825 47.619 0.00 0.00 42.49 3.95
467 733 2.124903 CGGAATGATAACTCCCGAACG 58.875 52.381 0.00 0.00 42.49 3.95
468 734 2.480759 CGGAATGATAACTCCCGAACGT 60.481 50.000 0.00 0.00 42.49 3.99
469 735 3.528532 GGAATGATAACTCCCGAACGTT 58.471 45.455 0.00 0.00 0.00 3.99
470 736 3.554731 GGAATGATAACTCCCGAACGTTC 59.445 47.826 18.47 18.47 0.00 3.95
481 747 0.712222 CGAACGTTCGGGAGTTAAGC 59.288 55.000 36.53 4.05 46.30 3.09
482 748 1.787012 GAACGTTCGGGAGTTAAGCA 58.213 50.000 13.36 0.00 0.00 3.91
483 749 2.344025 GAACGTTCGGGAGTTAAGCAT 58.656 47.619 13.36 0.00 0.00 3.79
484 750 1.722011 ACGTTCGGGAGTTAAGCATG 58.278 50.000 0.00 0.00 0.00 4.06
485 751 1.006832 CGTTCGGGAGTTAAGCATGG 58.993 55.000 0.00 0.00 0.00 3.66
486 752 0.733150 GTTCGGGAGTTAAGCATGGC 59.267 55.000 0.00 0.00 0.00 4.40
487 753 0.326595 TTCGGGAGTTAAGCATGGCA 59.673 50.000 0.00 0.00 0.00 4.92
488 754 0.326595 TCGGGAGTTAAGCATGGCAA 59.673 50.000 0.00 0.00 0.00 4.52
489 755 0.451783 CGGGAGTTAAGCATGGCAAC 59.548 55.000 0.00 0.00 0.00 4.17
490 756 0.817654 GGGAGTTAAGCATGGCAACC 59.182 55.000 0.00 0.00 0.00 3.77
491 757 0.817654 GGAGTTAAGCATGGCAACCC 59.182 55.000 0.00 0.00 0.00 4.11
492 758 0.451783 GAGTTAAGCATGGCAACCCG 59.548 55.000 0.00 0.00 0.00 5.28
493 759 0.037590 AGTTAAGCATGGCAACCCGA 59.962 50.000 0.00 0.00 0.00 5.14
494 760 0.885196 GTTAAGCATGGCAACCCGAA 59.115 50.000 0.00 0.00 0.00 4.30
495 761 1.476488 GTTAAGCATGGCAACCCGAAT 59.524 47.619 0.00 0.00 0.00 3.34
496 762 1.102154 TAAGCATGGCAACCCGAATG 58.898 50.000 0.00 0.00 0.00 2.67
497 763 2.202783 GCATGGCAACCCGAATGC 60.203 61.111 0.00 0.00 43.08 3.56
498 764 2.713967 GCATGGCAACCCGAATGCT 61.714 57.895 0.00 0.00 43.34 3.79
499 765 1.892338 CATGGCAACCCGAATGCTT 59.108 52.632 0.00 0.00 43.34 3.91
500 766 0.247185 CATGGCAACCCGAATGCTTT 59.753 50.000 0.00 0.00 43.34 3.51
501 767 0.975887 ATGGCAACCCGAATGCTTTT 59.024 45.000 0.00 0.00 43.34 2.27
502 768 1.621992 TGGCAACCCGAATGCTTTTA 58.378 45.000 6.93 0.00 43.34 1.52
503 769 1.543802 TGGCAACCCGAATGCTTTTAG 59.456 47.619 6.93 0.00 43.34 1.85
504 770 1.816224 GGCAACCCGAATGCTTTTAGA 59.184 47.619 6.93 0.00 43.34 2.10
505 771 2.427095 GGCAACCCGAATGCTTTTAGAT 59.573 45.455 6.93 0.00 43.34 1.98
506 772 3.438360 GCAACCCGAATGCTTTTAGATG 58.562 45.455 0.00 0.00 40.64 2.90
507 773 3.734902 GCAACCCGAATGCTTTTAGATGG 60.735 47.826 0.00 0.00 40.64 3.51
508 774 2.024414 ACCCGAATGCTTTTAGATGGC 58.976 47.619 0.00 0.00 0.00 4.40
509 775 2.023673 CCCGAATGCTTTTAGATGGCA 58.976 47.619 0.00 0.00 40.32 4.92
510 776 2.033801 CCCGAATGCTTTTAGATGGCAG 59.966 50.000 0.00 0.00 39.38 4.85
511 777 2.542411 CCGAATGCTTTTAGATGGCAGC 60.542 50.000 0.00 0.00 39.38 5.25
512 778 2.357009 CGAATGCTTTTAGATGGCAGCT 59.643 45.455 11.24 11.24 39.38 4.24
513 779 3.181493 CGAATGCTTTTAGATGGCAGCTT 60.181 43.478 11.89 0.00 39.38 3.74
514 780 4.676196 CGAATGCTTTTAGATGGCAGCTTT 60.676 41.667 11.89 1.79 39.38 3.51
515 781 5.449041 CGAATGCTTTTAGATGGCAGCTTTA 60.449 40.000 11.89 0.00 39.38 1.85
516 782 4.970662 TGCTTTTAGATGGCAGCTTTAG 57.029 40.909 11.89 7.32 33.15 1.85
517 783 4.335416 TGCTTTTAGATGGCAGCTTTAGT 58.665 39.130 11.89 0.00 33.15 2.24
518 784 4.766891 TGCTTTTAGATGGCAGCTTTAGTT 59.233 37.500 11.89 0.00 33.15 2.24
519 785 5.243730 TGCTTTTAGATGGCAGCTTTAGTTT 59.756 36.000 11.89 0.00 33.15 2.66
520 786 5.574443 GCTTTTAGATGGCAGCTTTAGTTTG 59.426 40.000 11.89 0.00 0.00 2.93
521 787 4.701956 TTAGATGGCAGCTTTAGTTTGC 57.298 40.909 11.89 0.00 37.11 3.68
522 788 1.470098 AGATGGCAGCTTTAGTTTGCG 59.530 47.619 0.00 0.00 38.69 4.85
523 789 1.200020 GATGGCAGCTTTAGTTTGCGT 59.800 47.619 0.00 0.00 38.69 5.24
524 790 0.310543 TGGCAGCTTTAGTTTGCGTG 59.689 50.000 0.00 0.00 38.69 5.34
525 791 0.591170 GGCAGCTTTAGTTTGCGTGA 59.409 50.000 0.00 0.00 38.69 4.35
526 792 1.400242 GGCAGCTTTAGTTTGCGTGAG 60.400 52.381 0.00 0.00 38.69 3.51
527 793 1.531149 GCAGCTTTAGTTTGCGTGAGA 59.469 47.619 0.00 0.00 0.00 3.27
528 794 2.160417 GCAGCTTTAGTTTGCGTGAGAT 59.840 45.455 0.00 0.00 0.00 2.75
529 795 3.726190 GCAGCTTTAGTTTGCGTGAGATC 60.726 47.826 0.00 0.00 0.00 2.75
530 796 3.433274 CAGCTTTAGTTTGCGTGAGATCA 59.567 43.478 0.00 0.00 0.00 2.92
531 797 3.681897 AGCTTTAGTTTGCGTGAGATCAG 59.318 43.478 0.00 0.00 0.00 2.90
532 798 3.181516 GCTTTAGTTTGCGTGAGATCAGG 60.182 47.826 0.00 0.00 35.07 3.86
533 799 2.672961 TAGTTTGCGTGAGATCAGGG 57.327 50.000 4.84 0.00 32.80 4.45
534 800 0.976641 AGTTTGCGTGAGATCAGGGA 59.023 50.000 4.84 0.00 32.80 4.20
535 801 1.347707 AGTTTGCGTGAGATCAGGGAA 59.652 47.619 5.52 5.52 39.60 3.97
536 802 2.151202 GTTTGCGTGAGATCAGGGAAA 58.849 47.619 15.29 15.29 45.14 3.13
537 803 1.808411 TTGCGTGAGATCAGGGAAAC 58.192 50.000 6.96 0.00 38.69 2.78
538 804 0.684535 TGCGTGAGATCAGGGAAACA 59.315 50.000 4.84 0.00 32.80 2.83
539 805 1.278985 TGCGTGAGATCAGGGAAACAT 59.721 47.619 4.84 0.00 32.80 2.71
540 806 1.667724 GCGTGAGATCAGGGAAACATG 59.332 52.381 4.84 0.00 45.31 3.21
541 807 2.283298 CGTGAGATCAGGGAAACATGG 58.717 52.381 0.00 0.00 43.76 3.66
542 808 2.019984 GTGAGATCAGGGAAACATGGC 58.980 52.381 0.00 0.00 43.76 4.40
543 809 1.634973 TGAGATCAGGGAAACATGGCA 59.365 47.619 0.00 0.00 43.76 4.92
544 810 2.041485 TGAGATCAGGGAAACATGGCAA 59.959 45.455 0.00 0.00 43.76 4.52
545 811 3.294214 GAGATCAGGGAAACATGGCAAT 58.706 45.455 0.00 0.00 43.76 3.56
546 812 3.703052 GAGATCAGGGAAACATGGCAATT 59.297 43.478 0.00 0.00 43.76 2.32
547 813 4.098894 AGATCAGGGAAACATGGCAATTT 58.901 39.130 0.00 0.00 43.76 1.82
548 814 4.533311 AGATCAGGGAAACATGGCAATTTT 59.467 37.500 0.00 0.00 43.76 1.82
549 815 4.270245 TCAGGGAAACATGGCAATTTTC 57.730 40.909 13.20 13.20 43.76 2.29
550 816 3.903090 TCAGGGAAACATGGCAATTTTCT 59.097 39.130 18.32 9.73 43.76 2.52
551 817 3.998341 CAGGGAAACATGGCAATTTTCTG 59.002 43.478 18.32 15.23 38.79 3.02
552 818 3.903090 AGGGAAACATGGCAATTTTCTGA 59.097 39.130 18.32 0.00 31.21 3.27
553 819 3.996363 GGGAAACATGGCAATTTTCTGAC 59.004 43.478 18.32 9.54 31.21 3.51
554 820 4.502950 GGGAAACATGGCAATTTTCTGACA 60.503 41.667 18.32 0.00 39.14 3.58
555 821 5.055812 GGAAACATGGCAATTTTCTGACAA 58.944 37.500 18.32 0.00 38.03 3.18
556 822 5.526846 GGAAACATGGCAATTTTCTGACAAA 59.473 36.000 18.32 0.00 38.03 2.83
557 823 6.038050 GGAAACATGGCAATTTTCTGACAAAA 59.962 34.615 18.32 0.00 38.03 2.44
558 824 6.998968 AACATGGCAATTTTCTGACAAAAA 57.001 29.167 0.00 0.00 38.03 1.94
582 848 7.446001 AAAATGAAAAAGAACAAAGTTGCCA 57.554 28.000 0.00 0.00 0.00 4.92
583 849 7.628769 AAATGAAAAAGAACAAAGTTGCCAT 57.371 28.000 0.00 0.00 0.00 4.40
584 850 6.849588 ATGAAAAAGAACAAAGTTGCCATC 57.150 33.333 0.00 0.00 0.00 3.51
585 851 5.115480 TGAAAAAGAACAAAGTTGCCATCC 58.885 37.500 0.00 0.00 0.00 3.51
586 852 3.751479 AAAGAACAAAGTTGCCATCCC 57.249 42.857 0.00 0.00 0.00 3.85
587 853 1.632589 AGAACAAAGTTGCCATCCCC 58.367 50.000 0.00 0.00 0.00 4.81
588 854 1.147817 AGAACAAAGTTGCCATCCCCT 59.852 47.619 0.00 0.00 0.00 4.79
589 855 2.378547 AGAACAAAGTTGCCATCCCCTA 59.621 45.455 0.00 0.00 0.00 3.53
590 856 3.011708 AGAACAAAGTTGCCATCCCCTAT 59.988 43.478 0.00 0.00 0.00 2.57
591 857 3.473113 ACAAAGTTGCCATCCCCTATT 57.527 42.857 0.00 0.00 0.00 1.73
592 858 4.601406 ACAAAGTTGCCATCCCCTATTA 57.399 40.909 0.00 0.00 0.00 0.98
593 859 4.941713 ACAAAGTTGCCATCCCCTATTAA 58.058 39.130 0.00 0.00 0.00 1.40
594 860 5.528337 ACAAAGTTGCCATCCCCTATTAAT 58.472 37.500 0.00 0.00 0.00 1.40
595 861 5.963865 ACAAAGTTGCCATCCCCTATTAATT 59.036 36.000 0.00 0.00 0.00 1.40
596 862 7.129425 ACAAAGTTGCCATCCCCTATTAATTA 58.871 34.615 0.00 0.00 0.00 1.40
597 863 7.621683 ACAAAGTTGCCATCCCCTATTAATTAA 59.378 33.333 0.00 0.00 0.00 1.40
598 864 8.482128 CAAAGTTGCCATCCCCTATTAATTAAA 58.518 33.333 1.21 0.00 0.00 1.52
599 865 7.839680 AGTTGCCATCCCCTATTAATTAAAG 57.160 36.000 1.21 1.89 0.00 1.85
600 866 7.362234 AGTTGCCATCCCCTATTAATTAAAGT 58.638 34.615 1.21 0.00 0.00 2.66
601 867 7.844269 AGTTGCCATCCCCTATTAATTAAAGTT 59.156 33.333 1.21 0.00 0.00 2.66
602 868 7.595819 TGCCATCCCCTATTAATTAAAGTTG 57.404 36.000 1.21 0.00 0.00 3.16
603 869 7.129425 TGCCATCCCCTATTAATTAAAGTTGT 58.871 34.615 1.21 0.00 0.00 3.32
604 870 7.286775 TGCCATCCCCTATTAATTAAAGTTGTC 59.713 37.037 1.21 0.00 0.00 3.18
605 871 7.286775 GCCATCCCCTATTAATTAAAGTTGTCA 59.713 37.037 1.21 0.00 0.00 3.58
606 872 9.367160 CCATCCCCTATTAATTAAAGTTGTCAT 57.633 33.333 1.21 0.00 0.00 3.06
608 874 8.990163 TCCCCTATTAATTAAAGTTGTCATCC 57.010 34.615 1.21 0.00 0.00 3.51
609 875 8.002459 TCCCCTATTAATTAAAGTTGTCATCCC 58.998 37.037 1.21 0.00 0.00 3.85
610 876 7.040686 CCCCTATTAATTAAAGTTGTCATCCCG 60.041 40.741 1.21 0.00 0.00 5.14
611 877 7.501225 CCCTATTAATTAAAGTTGTCATCCCGT 59.499 37.037 1.21 0.00 0.00 5.28
612 878 9.550406 CCTATTAATTAAAGTTGTCATCCCGTA 57.450 33.333 1.21 0.00 0.00 4.02
614 880 5.789710 AATTAAAGTTGTCATCCCGTACG 57.210 39.130 8.69 8.69 0.00 3.67
615 881 4.517952 TTAAAGTTGTCATCCCGTACGA 57.482 40.909 18.76 0.00 0.00 3.43
616 882 3.389925 AAAGTTGTCATCCCGTACGAA 57.610 42.857 18.76 4.64 0.00 3.85
617 883 2.358939 AGTTGTCATCCCGTACGAAC 57.641 50.000 18.76 11.09 0.00 3.95
618 884 1.891150 AGTTGTCATCCCGTACGAACT 59.109 47.619 18.76 13.28 0.00 3.01
619 885 3.084039 AGTTGTCATCCCGTACGAACTA 58.916 45.455 18.76 0.00 0.00 2.24
620 886 3.507233 AGTTGTCATCCCGTACGAACTAA 59.493 43.478 18.76 0.00 0.00 2.24
621 887 4.022068 AGTTGTCATCCCGTACGAACTAAA 60.022 41.667 18.76 0.00 0.00 1.85
622 888 4.100707 TGTCATCCCGTACGAACTAAAG 57.899 45.455 18.76 0.00 0.00 1.85
623 889 3.507233 TGTCATCCCGTACGAACTAAAGT 59.493 43.478 18.76 0.00 0.00 2.66
624 890 4.022068 TGTCATCCCGTACGAACTAAAGTT 60.022 41.667 18.76 0.00 41.64 2.66
625 891 4.325472 GTCATCCCGTACGAACTAAAGTTG 59.675 45.833 18.76 0.00 38.56 3.16
626 892 2.676076 TCCCGTACGAACTAAAGTTGC 58.324 47.619 18.76 0.00 38.56 4.17
627 893 1.728425 CCCGTACGAACTAAAGTTGCC 59.272 52.381 18.76 0.00 38.56 4.52
628 894 2.406130 CCGTACGAACTAAAGTTGCCA 58.594 47.619 18.76 0.00 38.56 4.92
629 895 2.997986 CCGTACGAACTAAAGTTGCCAT 59.002 45.455 18.76 0.00 38.56 4.40
630 896 3.181524 CCGTACGAACTAAAGTTGCCATG 60.182 47.826 18.76 0.00 38.56 3.66
631 897 3.430895 CGTACGAACTAAAGTTGCCATGT 59.569 43.478 10.44 0.00 38.56 3.21
632 898 4.433805 CGTACGAACTAAAGTTGCCATGTC 60.434 45.833 10.44 0.00 38.56 3.06
633 899 3.472652 ACGAACTAAAGTTGCCATGTCA 58.527 40.909 0.00 0.00 38.56 3.58
634 900 3.880490 ACGAACTAAAGTTGCCATGTCAA 59.120 39.130 0.00 0.00 38.56 3.18
635 901 4.336993 ACGAACTAAAGTTGCCATGTCAAA 59.663 37.500 0.00 0.00 38.56 2.69
636 902 5.163602 ACGAACTAAAGTTGCCATGTCAAAA 60.164 36.000 0.00 0.00 38.56 2.44
637 903 5.173131 CGAACTAAAGTTGCCATGTCAAAAC 59.827 40.000 0.00 0.00 38.56 2.43
638 904 4.606961 ACTAAAGTTGCCATGTCAAAACG 58.393 39.130 0.00 0.00 0.00 3.60
639 905 3.518634 AAAGTTGCCATGTCAAAACGT 57.481 38.095 0.00 0.00 0.00 3.99
640 906 3.518634 AAGTTGCCATGTCAAAACGTT 57.481 38.095 0.00 0.00 0.00 3.99
641 907 3.078594 AGTTGCCATGTCAAAACGTTC 57.921 42.857 0.00 0.00 0.00 3.95
642 908 1.778591 GTTGCCATGTCAAAACGTTCG 59.221 47.619 0.00 0.00 0.00 3.95
643 909 0.309302 TGCCATGTCAAAACGTTCGG 59.691 50.000 0.00 0.00 0.00 4.30
644 910 0.386731 GCCATGTCAAAACGTTCGGG 60.387 55.000 0.00 0.00 0.00 5.14
645 911 1.231221 CCATGTCAAAACGTTCGGGA 58.769 50.000 0.00 0.00 0.00 5.14
646 912 1.069500 CCATGTCAAAACGTTCGGGAC 60.069 52.381 15.81 15.81 0.00 4.46
661 927 2.851805 GGGACGAAATGCTCAAATCC 57.148 50.000 0.00 0.00 0.00 3.01
662 928 1.405463 GGGACGAAATGCTCAAATCCC 59.595 52.381 0.00 0.00 34.70 3.85
663 929 1.064060 GGACGAAATGCTCAAATCCCG 59.936 52.381 0.00 0.00 0.00 5.14
664 930 2.006888 GACGAAATGCTCAAATCCCGA 58.993 47.619 0.00 0.00 0.00 5.14
665 931 2.418628 GACGAAATGCTCAAATCCCGAA 59.581 45.455 0.00 0.00 0.00 4.30
666 932 2.161609 ACGAAATGCTCAAATCCCGAAC 59.838 45.455 0.00 0.00 0.00 3.95
667 933 2.785679 GAAATGCTCAAATCCCGAACG 58.214 47.619 0.00 0.00 0.00 3.95
668 934 1.821216 AATGCTCAAATCCCGAACGT 58.179 45.000 0.00 0.00 0.00 3.99
669 935 1.821216 ATGCTCAAATCCCGAACGTT 58.179 45.000 0.00 0.00 0.00 3.99
670 936 1.153353 TGCTCAAATCCCGAACGTTC 58.847 50.000 18.47 18.47 0.00 3.95
679 945 4.917474 CGAACGTTCGGGGGTTAT 57.083 55.556 36.53 0.00 46.30 1.89
680 946 3.142124 CGAACGTTCGGGGGTTATT 57.858 52.632 36.53 0.00 46.30 1.40
681 947 0.722848 CGAACGTTCGGGGGTTATTG 59.277 55.000 36.53 10.09 46.30 1.90
682 948 1.089112 GAACGTTCGGGGGTTATTGG 58.911 55.000 13.36 0.00 0.00 3.16
683 949 0.691904 AACGTTCGGGGGTTATTGGA 59.308 50.000 0.00 0.00 0.00 3.53
684 950 0.913924 ACGTTCGGGGGTTATTGGAT 59.086 50.000 0.00 0.00 0.00 3.41
685 951 1.282738 ACGTTCGGGGGTTATTGGATT 59.717 47.619 0.00 0.00 0.00 3.01
686 952 1.944709 CGTTCGGGGGTTATTGGATTC 59.055 52.381 0.00 0.00 0.00 2.52
687 953 2.304092 GTTCGGGGGTTATTGGATTCC 58.696 52.381 0.00 0.00 0.00 3.01
688 954 1.597681 TCGGGGGTTATTGGATTCCA 58.402 50.000 0.00 0.00 0.00 3.53
706 972 4.135747 TCCAAAAGAAAAGTTTGCCAGG 57.864 40.909 0.00 0.00 35.13 4.45
774 1041 1.302285 CTCTGGCTGTCAATGGGCT 59.698 57.895 0.00 0.00 0.00 5.19
775 1042 0.543277 CTCTGGCTGTCAATGGGCTA 59.457 55.000 0.00 0.00 0.00 3.93
812 1079 4.047125 CAATCACGTGGGCCCCCT 62.047 66.667 22.27 0.00 36.94 4.79
835 1102 4.094684 CGTTCTTCCGCTAGCCTG 57.905 61.111 9.66 0.22 0.00 4.85
836 1103 2.167861 CGTTCTTCCGCTAGCCTGC 61.168 63.158 9.66 0.00 0.00 4.85
837 1104 1.219393 GTTCTTCCGCTAGCCTGCT 59.781 57.895 9.66 0.00 0.00 4.24
864 1131 1.597027 CCACCGGTCGAGCAAAACT 60.597 57.895 15.89 0.00 0.00 2.66
882 1149 1.004679 TTTTCCTACGCGACACCCC 60.005 57.895 15.93 0.00 0.00 4.95
887 1154 1.296056 CCTACGCGACACCCCAAAAG 61.296 60.000 15.93 0.00 0.00 2.27
1352 1647 1.794885 TTCGGATTGGCCCCCTTGAA 61.795 55.000 0.00 0.00 0.00 2.69
1353 1648 1.076044 CGGATTGGCCCCCTTGAAT 60.076 57.895 0.00 0.00 0.00 2.57
1356 1651 2.041081 CGGATTGGCCCCCTTGAATATA 59.959 50.000 0.00 0.00 0.00 0.86
1357 1652 3.499563 CGGATTGGCCCCCTTGAATATAA 60.500 47.826 0.00 0.00 0.00 0.98
1359 1654 5.093677 GGATTGGCCCCCTTGAATATAAAT 58.906 41.667 0.00 0.00 0.00 1.40
1360 1655 5.046376 GGATTGGCCCCCTTGAATATAAATG 60.046 44.000 0.00 0.00 0.00 2.32
1361 1656 3.855668 TGGCCCCCTTGAATATAAATGG 58.144 45.455 0.00 0.00 0.00 3.16
1364 1659 3.578282 GCCCCCTTGAATATAAATGGTGG 59.422 47.826 0.00 0.00 0.00 4.61
1365 1660 3.578282 CCCCCTTGAATATAAATGGTGGC 59.422 47.826 0.00 0.00 0.00 5.01
1366 1661 3.578282 CCCCTTGAATATAAATGGTGGCC 59.422 47.826 0.00 0.00 0.00 5.36
1368 1663 3.888930 CCTTGAATATAAATGGTGGCCGT 59.111 43.478 0.00 0.00 0.00 5.68
1369 1664 4.340950 CCTTGAATATAAATGGTGGCCGTT 59.659 41.667 0.00 0.00 33.67 4.44
1370 1665 5.507315 CCTTGAATATAAATGGTGGCCGTTC 60.507 44.000 0.00 0.00 30.58 3.95
1371 1666 4.787551 TGAATATAAATGGTGGCCGTTCT 58.212 39.130 0.00 0.00 30.58 3.01
1372 1667 4.578516 TGAATATAAATGGTGGCCGTTCTG 59.421 41.667 0.00 0.00 30.58 3.02
1373 1668 2.507407 ATAAATGGTGGCCGTTCTGT 57.493 45.000 0.00 0.00 30.58 3.41
1374 1669 2.279935 TAAATGGTGGCCGTTCTGTT 57.720 45.000 0.00 0.00 30.58 3.16
1478 1779 0.836606 TCCGGCATTATCTTGGCAGA 59.163 50.000 0.00 0.00 41.97 4.26
1479 1780 1.202687 TCCGGCATTATCTTGGCAGAG 60.203 52.381 0.00 0.00 41.97 3.35
1492 1793 2.195727 TGGCAGAGGTTATCCATGTCA 58.804 47.619 0.00 0.00 35.80 3.58
1497 1798 4.125703 CAGAGGTTATCCATGTCAGCTTC 58.874 47.826 0.00 0.00 35.89 3.86
1757 2060 7.812191 GGTTGATATGTTATTGACTTGCACAAA 59.188 33.333 0.00 0.00 0.00 2.83
2036 2569 7.497595 TGGTATTTCCACATGATAGTCTGTAC 58.502 38.462 0.00 0.00 41.93 2.90
2199 2732 2.238898 ACATAAGAGGCGGGCTAAAGTT 59.761 45.455 3.20 0.00 0.00 2.66
2271 2804 2.413453 GTCTTCCTGCTTAGCAAACTCG 59.587 50.000 8.68 0.00 38.41 4.18
2380 2913 6.371809 AGATTCTATGAAGTGACTCGACTC 57.628 41.667 0.00 0.00 0.00 3.36
2427 2960 9.920946 AGGATGATAAAGTCCAGCTTAAATAAA 57.079 29.630 0.00 0.00 36.17 1.40
2442 2975 8.043570 GCTTAAATAAAAGCTGATGATTGTCG 57.956 34.615 1.45 0.00 46.74 4.35
2443 2976 7.698130 GCTTAAATAAAAGCTGATGATTGTCGT 59.302 33.333 1.45 0.00 46.74 4.34
2444 2977 9.214953 CTTAAATAAAAGCTGATGATTGTCGTC 57.785 33.333 0.00 0.00 33.13 4.20
2445 2978 6.741992 AATAAAAGCTGATGATTGTCGTCA 57.258 33.333 0.00 2.27 39.87 4.35
2446 2979 6.932356 ATAAAAGCTGATGATTGTCGTCAT 57.068 33.333 2.62 0.00 41.15 3.06
2447 2980 4.611310 AAAGCTGATGATTGTCGTCATG 57.389 40.909 2.62 0.00 41.15 3.07
2448 2981 3.257469 AGCTGATGATTGTCGTCATGT 57.743 42.857 2.62 0.00 41.15 3.21
2449 2982 3.603532 AGCTGATGATTGTCGTCATGTT 58.396 40.909 2.62 0.00 41.15 2.71
2450 2983 4.758688 AGCTGATGATTGTCGTCATGTTA 58.241 39.130 2.62 0.00 41.15 2.41
2451 2984 5.363101 AGCTGATGATTGTCGTCATGTTAT 58.637 37.500 2.62 0.00 41.15 1.89
2452 2985 6.515832 AGCTGATGATTGTCGTCATGTTATA 58.484 36.000 2.62 0.00 41.15 0.98
2453 2986 7.157347 AGCTGATGATTGTCGTCATGTTATAT 58.843 34.615 2.62 0.00 41.15 0.86
2454 2987 7.330454 AGCTGATGATTGTCGTCATGTTATATC 59.670 37.037 2.62 0.00 41.15 1.63
2455 2988 7.330454 GCTGATGATTGTCGTCATGTTATATCT 59.670 37.037 2.62 0.00 41.15 1.98
2456 2989 9.846248 CTGATGATTGTCGTCATGTTATATCTA 57.154 33.333 2.62 0.00 41.15 1.98
2531 3110 7.662897 TGGGTTAATAACATGAGAACCAAAAC 58.337 34.615 0.00 0.00 41.15 2.43
2651 3231 1.339929 GTTGAATGTTGTGGTGGGTCC 59.660 52.381 0.00 0.00 0.00 4.46
2712 3294 6.207417 CCCATTCATAATTGTATGGTGAGGTC 59.793 42.308 9.75 0.00 44.90 3.85
2713 3295 6.073058 CCATTCATAATTGTATGGTGAGGTCG 60.073 42.308 4.09 0.00 42.70 4.79
2758 3340 7.726033 AATAAGTTAGTGTGGATGACTCTCT 57.274 36.000 0.00 0.00 30.90 3.10
2759 3341 7.726033 ATAAGTTAGTGTGGATGACTCTCTT 57.274 36.000 0.00 0.00 30.90 2.85
2760 3342 8.824756 ATAAGTTAGTGTGGATGACTCTCTTA 57.175 34.615 0.00 0.00 30.90 2.10
3113 3695 4.015084 AGGTCTTGGAATTCATCTGCAAG 58.985 43.478 7.93 10.79 31.98 4.01
3114 3696 3.760684 GGTCTTGGAATTCATCTGCAAGT 59.239 43.478 16.21 0.00 32.37 3.16
3140 3722 3.144506 ACAAGCTGTGGAGAATGAACTG 58.855 45.455 0.00 0.00 0.00 3.16
3207 3789 5.734720 CTTGTATCCAGTGGTGTACAGAAT 58.265 41.667 21.13 5.85 31.17 2.40
3222 3804 7.868415 GGTGTACAGAATAGTCATGGTATTCTC 59.132 40.741 20.10 13.66 42.73 2.87
3223 3805 7.868415 GTGTACAGAATAGTCATGGTATTCTCC 59.132 40.741 20.10 14.36 42.73 3.71
3347 3929 6.428465 TCTCAATGTAAATTACACTCGGCAAA 59.572 34.615 8.12 0.00 42.23 3.68
3408 3990 4.760530 ATACAGAGCACATAAGCTGGAA 57.239 40.909 0.00 0.00 46.75 3.53
3544 4126 1.157870 CGCCCCTGTTACCTTATGCG 61.158 60.000 0.00 0.00 34.52 4.73
3936 4518 2.679837 CCATCCCAAACTCTGACGATTG 59.320 50.000 0.00 0.00 0.00 2.67
3947 4529 2.158885 TCTGACGATTGTGGACACCAAA 60.159 45.455 0.00 0.00 34.18 3.28
4047 4629 1.252904 TTGGTACTTCCTCCGTCCCG 61.253 60.000 0.00 0.00 37.07 5.14
4177 4766 8.494433 AGATTAAAGAACATACATGCTCCCTAA 58.506 33.333 0.00 0.00 0.00 2.69
4420 5719 7.710907 TCACTCATTTTGCTATGTATGTAGTCC 59.289 37.037 0.00 0.00 0.00 3.85
4427 5726 6.308015 TGCTATGTATGTAGTCCCTTTTGT 57.692 37.500 0.00 0.00 0.00 2.83
4429 5728 7.497595 TGCTATGTATGTAGTCCCTTTTGTAG 58.502 38.462 0.00 0.00 0.00 2.74
4438 5737 7.236529 TGTAGTCCCTTTTGTAGTCTCTAGAA 58.763 38.462 0.00 0.00 0.00 2.10
4443 5742 6.781014 TCCCTTTTGTAGTCTCTAGAAAGACA 59.219 38.462 13.05 4.20 46.65 3.41
4466 5794 6.936900 ACATATATTTAAGTGGGCTGCAGTAG 59.063 38.462 16.64 0.00 0.00 2.57
4571 6473 3.338249 TGCAATGCACTACTTCTCTTCC 58.662 45.455 2.72 0.00 31.71 3.46
4596 6498 7.254795 CCAAGTTGAAACTTAACTACACCTCAG 60.255 40.741 3.87 0.00 46.89 3.35
4617 6519 4.572389 CAGTTAGCAACTAAGGTATGCAGG 59.428 45.833 0.00 0.00 40.46 4.85
4658 6560 1.821759 CCAACACTTGTGCGGTCCA 60.822 57.895 0.10 0.00 0.00 4.02
4853 6900 8.757982 ACAATCATATCTGTTTTCATAGCCTT 57.242 30.769 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.406512 ACATGTCCCTAGTAAGCCTCT 57.593 47.619 0.00 0.00 0.00 3.69
1 2 3.197983 ACAACATGTCCCTAGTAAGCCTC 59.802 47.826 0.00 0.00 0.00 4.70
2 3 3.055094 CACAACATGTCCCTAGTAAGCCT 60.055 47.826 0.00 0.00 0.00 4.58
3 4 3.270877 CACAACATGTCCCTAGTAAGCC 58.729 50.000 0.00 0.00 0.00 4.35
4 5 3.270877 CCACAACATGTCCCTAGTAAGC 58.729 50.000 0.00 0.00 0.00 3.09
5 6 4.223032 AGACCACAACATGTCCCTAGTAAG 59.777 45.833 0.00 0.00 31.76 2.34
6 7 4.164981 AGACCACAACATGTCCCTAGTAA 58.835 43.478 0.00 0.00 31.76 2.24
7 8 3.786553 AGACCACAACATGTCCCTAGTA 58.213 45.455 0.00 0.00 31.76 1.82
8 9 2.621070 AGACCACAACATGTCCCTAGT 58.379 47.619 0.00 0.00 31.76 2.57
9 10 4.162320 ACATAGACCACAACATGTCCCTAG 59.838 45.833 0.00 0.00 31.76 3.02
10 11 4.101114 ACATAGACCACAACATGTCCCTA 58.899 43.478 0.00 0.00 31.76 3.53
11 12 2.912956 ACATAGACCACAACATGTCCCT 59.087 45.455 0.00 0.00 31.76 4.20
12 13 3.350219 ACATAGACCACAACATGTCCC 57.650 47.619 0.00 0.00 31.76 4.46
13 14 6.037172 GTGAATACATAGACCACAACATGTCC 59.963 42.308 0.00 0.00 33.78 4.02
14 15 6.593770 TGTGAATACATAGACCACAACATGTC 59.406 38.462 0.00 0.00 35.16 3.06
15 16 6.472016 TGTGAATACATAGACCACAACATGT 58.528 36.000 0.00 0.00 35.16 3.21
16 17 6.983474 TGTGAATACATAGACCACAACATG 57.017 37.500 0.00 0.00 35.16 3.21
32 33 9.483916 CCAGAAACCGTAATACATATGTGAATA 57.516 33.333 18.81 5.88 0.00 1.75
33 34 7.990886 ACCAGAAACCGTAATACATATGTGAAT 59.009 33.333 18.81 1.75 0.00 2.57
34 35 7.332557 ACCAGAAACCGTAATACATATGTGAA 58.667 34.615 18.81 0.00 0.00 3.18
35 36 6.880484 ACCAGAAACCGTAATACATATGTGA 58.120 36.000 18.81 3.26 0.00 3.58
36 37 7.548196 AACCAGAAACCGTAATACATATGTG 57.452 36.000 18.81 2.87 0.00 3.21
37 38 9.841295 ATTAACCAGAAACCGTAATACATATGT 57.159 29.630 13.93 13.93 0.00 2.29
41 42 9.669887 TTGTATTAACCAGAAACCGTAATACAT 57.330 29.630 12.74 0.00 38.15 2.29
42 43 9.669887 ATTGTATTAACCAGAAACCGTAATACA 57.330 29.630 9.41 9.41 37.23 2.29
48 49 8.833493 GCTATAATTGTATTAACCAGAAACCGT 58.167 33.333 0.00 0.00 0.00 4.83
49 50 8.832521 TGCTATAATTGTATTAACCAGAAACCG 58.167 33.333 0.00 0.00 0.00 4.44
115 116 8.704668 CCCTAGAGGCAAAAATAAATTGGTTAT 58.295 33.333 0.00 0.00 33.58 1.89
116 117 8.073467 CCCTAGAGGCAAAAATAAATTGGTTA 57.927 34.615 0.00 0.00 0.00 2.85
117 118 6.946340 CCCTAGAGGCAAAAATAAATTGGTT 58.054 36.000 0.00 0.00 0.00 3.67
118 119 6.544928 CCCTAGAGGCAAAAATAAATTGGT 57.455 37.500 0.00 0.00 0.00 3.67
133 134 4.103153 TCTGTTGGAAATATGCCCTAGAGG 59.897 45.833 0.00 0.00 39.47 3.69
134 135 5.296151 TCTGTTGGAAATATGCCCTAGAG 57.704 43.478 0.00 0.00 0.00 2.43
135 136 5.912149 ATCTGTTGGAAATATGCCCTAGA 57.088 39.130 0.00 0.00 0.00 2.43
136 137 7.335422 GTCATATCTGTTGGAAATATGCCCTAG 59.665 40.741 0.00 0.00 34.70 3.02
137 138 7.168219 GTCATATCTGTTGGAAATATGCCCTA 58.832 38.462 0.00 0.00 34.70 3.53
138 139 6.006449 GTCATATCTGTTGGAAATATGCCCT 58.994 40.000 0.00 0.00 34.70 5.19
139 140 5.769662 TGTCATATCTGTTGGAAATATGCCC 59.230 40.000 0.00 0.00 34.70 5.36
140 141 6.882610 TGTCATATCTGTTGGAAATATGCC 57.117 37.500 0.00 0.00 34.70 4.40
141 142 7.175467 TGGATGTCATATCTGTTGGAAATATGC 59.825 37.037 0.00 0.00 34.70 3.14
142 143 8.625786 TGGATGTCATATCTGTTGGAAATATG 57.374 34.615 0.00 0.00 35.58 1.78
143 144 9.293404 CTTGGATGTCATATCTGTTGGAAATAT 57.707 33.333 0.00 0.00 0.00 1.28
144 145 8.493607 TCTTGGATGTCATATCTGTTGGAAATA 58.506 33.333 0.00 0.00 0.00 1.40
145 146 7.348815 TCTTGGATGTCATATCTGTTGGAAAT 58.651 34.615 0.00 0.00 0.00 2.17
146 147 6.720309 TCTTGGATGTCATATCTGTTGGAAA 58.280 36.000 0.00 0.00 0.00 3.13
147 148 6.070021 ACTCTTGGATGTCATATCTGTTGGAA 60.070 38.462 0.00 0.00 0.00 3.53
148 149 5.426509 ACTCTTGGATGTCATATCTGTTGGA 59.573 40.000 0.00 0.00 0.00 3.53
149 150 5.678583 ACTCTTGGATGTCATATCTGTTGG 58.321 41.667 0.00 0.00 0.00 3.77
150 151 6.343703 TGACTCTTGGATGTCATATCTGTTG 58.656 40.000 0.00 0.00 38.15 3.33
151 152 6.550938 TGACTCTTGGATGTCATATCTGTT 57.449 37.500 0.00 0.00 38.15 3.16
152 153 6.550938 TTGACTCTTGGATGTCATATCTGT 57.449 37.500 0.00 0.00 41.93 3.41
153 154 7.215085 TCATTGACTCTTGGATGTCATATCTG 58.785 38.462 0.00 0.00 41.93 2.90
188 189 6.127196 TGTCACTTGAGCATATATACACACCA 60.127 38.462 0.00 0.00 0.00 4.17
189 190 6.280643 TGTCACTTGAGCATATATACACACC 58.719 40.000 0.00 0.00 0.00 4.16
217 218 0.964358 AGTTGCATGGCTTCTGGCTC 60.964 55.000 0.00 0.00 41.46 4.70
218 219 0.541296 AAGTTGCATGGCTTCTGGCT 60.541 50.000 0.00 0.00 41.46 4.75
219 220 0.319405 AAAGTTGCATGGCTTCTGGC 59.681 50.000 0.00 0.00 40.90 4.85
220 221 2.803956 CAAAAAGTTGCATGGCTTCTGG 59.196 45.455 0.00 0.00 0.00 3.86
317 322 4.093408 GTCACATGTCAACATTATGCGACT 59.907 41.667 13.90 1.36 33.42 4.18
320 325 4.093261 TGAGTCACATGTCAACATTATGCG 59.907 41.667 0.00 0.00 33.61 4.73
337 342 1.337703 GCACAACTGCCAAATGAGTCA 59.662 47.619 0.00 0.00 37.45 3.41
361 366 0.394938 TGTTGGTACAGTGCCATCGT 59.605 50.000 11.69 0.00 42.39 3.73
363 368 4.022416 TCATTTTGTTGGTACAGTGCCATC 60.022 41.667 11.69 11.27 42.39 3.51
370 375 7.227512 ACTTCTCTTCTCATTTTGTTGGTACAG 59.772 37.037 0.00 0.00 42.39 2.74
404 409 4.351192 GAGCTCACACGAAAAACAACAAT 58.649 39.130 9.40 0.00 0.00 2.71
414 680 3.691342 CCGGGGAGCTCACACGAA 61.691 66.667 23.16 0.00 0.00 3.85
418 684 1.675219 GTAAACCGGGGAGCTCACA 59.325 57.895 19.73 0.00 0.00 3.58
428 694 3.066481 TCCGTTTCTTTTTGGTAAACCGG 59.934 43.478 0.00 0.00 39.43 5.28
445 711 3.528532 GTTCGGGAGTTATCATTCCGTT 58.471 45.455 0.00 0.00 41.27 4.44
446 712 2.480759 CGTTCGGGAGTTATCATTCCGT 60.481 50.000 0.00 0.00 41.27 4.69
447 713 2.124903 CGTTCGGGAGTTATCATTCCG 58.875 52.381 0.00 0.00 41.80 4.30
448 714 3.175109 ACGTTCGGGAGTTATCATTCC 57.825 47.619 0.00 0.00 0.00 3.01
449 715 3.242248 CGAACGTTCGGGAGTTATCATTC 59.758 47.826 36.53 2.76 46.30 2.67
450 716 3.184541 CGAACGTTCGGGAGTTATCATT 58.815 45.455 36.53 0.00 46.30 2.57
451 717 2.805845 CGAACGTTCGGGAGTTATCAT 58.194 47.619 36.53 0.00 46.30 2.45
452 718 2.267188 CGAACGTTCGGGAGTTATCA 57.733 50.000 36.53 0.00 46.30 2.15
463 729 1.787012 TGCTTAACTCCCGAACGTTC 58.213 50.000 18.47 18.47 0.00 3.95
464 730 2.073816 CATGCTTAACTCCCGAACGTT 58.926 47.619 0.00 0.00 0.00 3.99
465 731 1.674817 CCATGCTTAACTCCCGAACGT 60.675 52.381 0.00 0.00 0.00 3.99
466 732 1.006832 CCATGCTTAACTCCCGAACG 58.993 55.000 0.00 0.00 0.00 3.95
467 733 0.733150 GCCATGCTTAACTCCCGAAC 59.267 55.000 0.00 0.00 0.00 3.95
468 734 0.326595 TGCCATGCTTAACTCCCGAA 59.673 50.000 0.00 0.00 0.00 4.30
469 735 0.326595 TTGCCATGCTTAACTCCCGA 59.673 50.000 0.00 0.00 0.00 5.14
470 736 0.451783 GTTGCCATGCTTAACTCCCG 59.548 55.000 0.00 0.00 0.00 5.14
471 737 0.817654 GGTTGCCATGCTTAACTCCC 59.182 55.000 0.00 0.00 0.00 4.30
472 738 0.817654 GGGTTGCCATGCTTAACTCC 59.182 55.000 0.00 0.00 0.00 3.85
473 739 0.451783 CGGGTTGCCATGCTTAACTC 59.548 55.000 0.00 0.00 0.00 3.01
474 740 0.037590 TCGGGTTGCCATGCTTAACT 59.962 50.000 0.00 0.00 0.00 2.24
475 741 0.885196 TTCGGGTTGCCATGCTTAAC 59.115 50.000 0.00 0.00 0.00 2.01
476 742 1.476085 CATTCGGGTTGCCATGCTTAA 59.524 47.619 0.00 0.00 0.00 1.85
477 743 1.102154 CATTCGGGTTGCCATGCTTA 58.898 50.000 0.00 0.00 0.00 3.09
478 744 1.892338 CATTCGGGTTGCCATGCTT 59.108 52.632 0.00 0.00 0.00 3.91
479 745 2.713967 GCATTCGGGTTGCCATGCT 61.714 57.895 0.00 0.00 39.20 3.79
480 746 2.202783 GCATTCGGGTTGCCATGC 60.203 61.111 0.00 0.00 35.59 4.06
481 747 0.247185 AAAGCATTCGGGTTGCCATG 59.753 50.000 2.25 0.00 41.06 3.66
482 748 0.975887 AAAAGCATTCGGGTTGCCAT 59.024 45.000 2.25 0.00 41.06 4.40
483 749 1.543802 CTAAAAGCATTCGGGTTGCCA 59.456 47.619 2.25 0.00 41.06 4.92
484 750 1.816224 TCTAAAAGCATTCGGGTTGCC 59.184 47.619 2.25 0.00 41.06 4.52
485 751 3.438360 CATCTAAAAGCATTCGGGTTGC 58.562 45.455 0.00 0.00 37.28 4.17
486 752 3.734902 GCCATCTAAAAGCATTCGGGTTG 60.735 47.826 0.00 0.00 37.28 3.77
487 753 2.427095 GCCATCTAAAAGCATTCGGGTT 59.573 45.455 0.00 0.00 39.32 4.11
488 754 2.024414 GCCATCTAAAAGCATTCGGGT 58.976 47.619 0.00 0.00 0.00 5.28
489 755 2.023673 TGCCATCTAAAAGCATTCGGG 58.976 47.619 0.00 0.00 0.00 5.14
490 756 2.542411 GCTGCCATCTAAAAGCATTCGG 60.542 50.000 0.00 0.00 35.64 4.30
491 757 2.357009 AGCTGCCATCTAAAAGCATTCG 59.643 45.455 0.00 0.00 38.14 3.34
492 758 4.382345 AAGCTGCCATCTAAAAGCATTC 57.618 40.909 0.00 0.00 38.14 2.67
493 759 4.813750 AAAGCTGCCATCTAAAAGCATT 57.186 36.364 0.00 0.00 38.14 3.56
494 760 4.952335 ACTAAAGCTGCCATCTAAAAGCAT 59.048 37.500 0.00 0.00 38.14 3.79
495 761 4.335416 ACTAAAGCTGCCATCTAAAAGCA 58.665 39.130 0.00 0.00 38.14 3.91
496 762 4.972514 ACTAAAGCTGCCATCTAAAAGC 57.027 40.909 0.00 0.00 35.86 3.51
497 763 5.574443 GCAAACTAAAGCTGCCATCTAAAAG 59.426 40.000 0.00 0.00 0.00 2.27
498 764 5.469479 GCAAACTAAAGCTGCCATCTAAAA 58.531 37.500 0.00 0.00 0.00 1.52
499 765 4.379394 CGCAAACTAAAGCTGCCATCTAAA 60.379 41.667 0.00 0.00 32.27 1.85
500 766 3.126858 CGCAAACTAAAGCTGCCATCTAA 59.873 43.478 0.00 0.00 32.27 2.10
501 767 2.677836 CGCAAACTAAAGCTGCCATCTA 59.322 45.455 0.00 0.00 32.27 1.98
502 768 1.470098 CGCAAACTAAAGCTGCCATCT 59.530 47.619 0.00 0.00 32.27 2.90
503 769 1.200020 ACGCAAACTAAAGCTGCCATC 59.800 47.619 0.00 0.00 32.27 3.51
504 770 1.068333 CACGCAAACTAAAGCTGCCAT 60.068 47.619 0.00 0.00 32.27 4.40
505 771 0.310543 CACGCAAACTAAAGCTGCCA 59.689 50.000 0.00 0.00 32.27 4.92
506 772 0.591170 TCACGCAAACTAAAGCTGCC 59.409 50.000 0.00 0.00 32.27 4.85
507 773 1.531149 TCTCACGCAAACTAAAGCTGC 59.469 47.619 0.00 0.00 0.00 5.25
508 774 3.433274 TGATCTCACGCAAACTAAAGCTG 59.567 43.478 0.00 0.00 0.00 4.24
509 775 3.664107 TGATCTCACGCAAACTAAAGCT 58.336 40.909 0.00 0.00 0.00 3.74
510 776 3.181516 CCTGATCTCACGCAAACTAAAGC 60.182 47.826 0.00 0.00 0.00 3.51
511 777 3.372206 CCCTGATCTCACGCAAACTAAAG 59.628 47.826 0.00 0.00 0.00 1.85
512 778 3.007506 TCCCTGATCTCACGCAAACTAAA 59.992 43.478 0.00 0.00 0.00 1.85
513 779 2.565391 TCCCTGATCTCACGCAAACTAA 59.435 45.455 0.00 0.00 0.00 2.24
514 780 2.176045 TCCCTGATCTCACGCAAACTA 58.824 47.619 0.00 0.00 0.00 2.24
515 781 0.976641 TCCCTGATCTCACGCAAACT 59.023 50.000 0.00 0.00 0.00 2.66
516 782 1.808411 TTCCCTGATCTCACGCAAAC 58.192 50.000 0.00 0.00 0.00 2.93
517 783 2.151202 GTTTCCCTGATCTCACGCAAA 58.849 47.619 0.00 0.00 0.00 3.68
518 784 1.071542 TGTTTCCCTGATCTCACGCAA 59.928 47.619 0.00 0.00 0.00 4.85
519 785 0.684535 TGTTTCCCTGATCTCACGCA 59.315 50.000 0.00 0.00 0.00 5.24
520 786 1.667724 CATGTTTCCCTGATCTCACGC 59.332 52.381 0.00 0.00 0.00 5.34
521 787 2.283298 CCATGTTTCCCTGATCTCACG 58.717 52.381 0.00 0.00 0.00 4.35
522 788 2.019984 GCCATGTTTCCCTGATCTCAC 58.980 52.381 0.00 0.00 0.00 3.51
523 789 1.634973 TGCCATGTTTCCCTGATCTCA 59.365 47.619 0.00 0.00 0.00 3.27
524 790 2.425143 TGCCATGTTTCCCTGATCTC 57.575 50.000 0.00 0.00 0.00 2.75
525 791 2.905415 TTGCCATGTTTCCCTGATCT 57.095 45.000 0.00 0.00 0.00 2.75
526 792 4.476628 AAATTGCCATGTTTCCCTGATC 57.523 40.909 0.00 0.00 0.00 2.92
527 793 4.533311 AGAAAATTGCCATGTTTCCCTGAT 59.467 37.500 2.96 0.00 32.74 2.90
528 794 3.903090 AGAAAATTGCCATGTTTCCCTGA 59.097 39.130 2.96 0.00 32.74 3.86
529 795 3.998341 CAGAAAATTGCCATGTTTCCCTG 59.002 43.478 2.96 0.00 32.74 4.45
530 796 3.903090 TCAGAAAATTGCCATGTTTCCCT 59.097 39.130 2.96 0.00 32.74 4.20
531 797 3.996363 GTCAGAAAATTGCCATGTTTCCC 59.004 43.478 2.96 0.00 32.74 3.97
532 798 4.630111 TGTCAGAAAATTGCCATGTTTCC 58.370 39.130 2.96 0.00 32.74 3.13
533 799 6.601741 TTTGTCAGAAAATTGCCATGTTTC 57.398 33.333 0.00 0.00 0.00 2.78
534 800 6.998968 TTTTGTCAGAAAATTGCCATGTTT 57.001 29.167 0.00 0.00 0.00 2.83
535 801 6.998968 TTTTTGTCAGAAAATTGCCATGTT 57.001 29.167 0.00 0.00 0.00 2.71
557 823 7.880105 TGGCAACTTTGTTCTTTTTCATTTTT 58.120 26.923 0.00 0.00 37.61 1.94
558 824 7.446001 TGGCAACTTTGTTCTTTTTCATTTT 57.554 28.000 0.00 0.00 37.61 1.82
559 825 7.201723 GGATGGCAACTTTGTTCTTTTTCATTT 60.202 33.333 0.00 0.00 37.61 2.32
560 826 6.260714 GGATGGCAACTTTGTTCTTTTTCATT 59.739 34.615 0.00 0.00 37.61 2.57
561 827 5.759763 GGATGGCAACTTTGTTCTTTTTCAT 59.240 36.000 0.00 0.00 37.61 2.57
562 828 5.115480 GGATGGCAACTTTGTTCTTTTTCA 58.885 37.500 0.00 0.00 37.61 2.69
563 829 4.511454 GGGATGGCAACTTTGTTCTTTTTC 59.489 41.667 0.00 0.00 37.61 2.29
564 830 4.450976 GGGATGGCAACTTTGTTCTTTTT 58.549 39.130 0.00 0.00 37.61 1.94
565 831 3.181455 GGGGATGGCAACTTTGTTCTTTT 60.181 43.478 0.00 0.00 37.61 2.27
566 832 2.368548 GGGGATGGCAACTTTGTTCTTT 59.631 45.455 0.00 0.00 37.61 2.52
567 833 1.970640 GGGGATGGCAACTTTGTTCTT 59.029 47.619 0.00 0.00 37.61 2.52
568 834 1.147817 AGGGGATGGCAACTTTGTTCT 59.852 47.619 0.00 0.00 37.61 3.01
569 835 1.632589 AGGGGATGGCAACTTTGTTC 58.367 50.000 0.00 0.00 37.61 3.18
570 836 2.990740 TAGGGGATGGCAACTTTGTT 57.009 45.000 0.00 0.00 37.61 2.83
571 837 3.473113 AATAGGGGATGGCAACTTTGT 57.527 42.857 0.00 0.00 37.61 2.83
572 838 6.484364 AATTAATAGGGGATGGCAACTTTG 57.516 37.500 0.00 0.00 37.61 2.77
573 839 8.616799 TTTAATTAATAGGGGATGGCAACTTT 57.383 30.769 0.00 0.00 37.61 2.66
574 840 7.844269 ACTTTAATTAATAGGGGATGGCAACTT 59.156 33.333 0.00 0.00 37.61 2.66
575 841 7.362234 ACTTTAATTAATAGGGGATGGCAACT 58.638 34.615 0.00 0.00 37.61 3.16
576 842 7.597288 ACTTTAATTAATAGGGGATGGCAAC 57.403 36.000 0.00 0.00 0.00 4.17
577 843 7.621683 ACAACTTTAATTAATAGGGGATGGCAA 59.378 33.333 0.00 0.00 0.00 4.52
578 844 7.129425 ACAACTTTAATTAATAGGGGATGGCA 58.871 34.615 0.00 0.00 0.00 4.92
579 845 7.286775 TGACAACTTTAATTAATAGGGGATGGC 59.713 37.037 0.00 2.70 0.00 4.40
580 846 8.760980 TGACAACTTTAATTAATAGGGGATGG 57.239 34.615 0.00 0.00 0.00 3.51
582 848 9.588096 GGATGACAACTTTAATTAATAGGGGAT 57.412 33.333 0.00 0.00 0.00 3.85
583 849 8.002459 GGGATGACAACTTTAATTAATAGGGGA 58.998 37.037 0.00 0.00 0.00 4.81
584 850 7.040686 CGGGATGACAACTTTAATTAATAGGGG 60.041 40.741 0.00 0.64 0.00 4.79
585 851 7.501225 ACGGGATGACAACTTTAATTAATAGGG 59.499 37.037 0.00 0.93 0.00 3.53
586 852 8.446599 ACGGGATGACAACTTTAATTAATAGG 57.553 34.615 0.00 0.00 0.00 2.57
588 854 9.033481 CGTACGGGATGACAACTTTAATTAATA 57.967 33.333 7.57 0.00 0.00 0.98
589 855 7.765360 TCGTACGGGATGACAACTTTAATTAAT 59.235 33.333 16.52 0.00 0.00 1.40
590 856 7.095910 TCGTACGGGATGACAACTTTAATTAA 58.904 34.615 16.52 0.00 0.00 1.40
591 857 6.629128 TCGTACGGGATGACAACTTTAATTA 58.371 36.000 16.52 0.00 0.00 1.40
592 858 5.481105 TCGTACGGGATGACAACTTTAATT 58.519 37.500 16.52 0.00 0.00 1.40
593 859 5.075858 TCGTACGGGATGACAACTTTAAT 57.924 39.130 16.52 0.00 0.00 1.40
594 860 4.517952 TCGTACGGGATGACAACTTTAA 57.482 40.909 16.52 0.00 0.00 1.52
595 861 4.022068 AGTTCGTACGGGATGACAACTTTA 60.022 41.667 16.52 0.00 0.00 1.85
596 862 3.062042 GTTCGTACGGGATGACAACTTT 58.938 45.455 16.52 0.00 0.00 2.66
597 863 2.298163 AGTTCGTACGGGATGACAACTT 59.702 45.455 16.52 0.00 0.00 2.66
598 864 1.891150 AGTTCGTACGGGATGACAACT 59.109 47.619 16.52 12.48 0.00 3.16
599 865 2.358939 AGTTCGTACGGGATGACAAC 57.641 50.000 16.52 10.32 0.00 3.32
600 866 4.022068 ACTTTAGTTCGTACGGGATGACAA 60.022 41.667 16.52 0.00 0.00 3.18
601 867 3.507233 ACTTTAGTTCGTACGGGATGACA 59.493 43.478 16.52 0.00 0.00 3.58
602 868 4.102035 ACTTTAGTTCGTACGGGATGAC 57.898 45.455 16.52 6.94 0.00 3.06
603 869 4.487948 CAACTTTAGTTCGTACGGGATGA 58.512 43.478 16.52 0.00 35.83 2.92
604 870 3.061697 GCAACTTTAGTTCGTACGGGATG 59.938 47.826 16.52 2.80 35.83 3.51
605 871 3.256558 GCAACTTTAGTTCGTACGGGAT 58.743 45.455 16.52 3.86 35.83 3.85
606 872 2.610232 GGCAACTTTAGTTCGTACGGGA 60.610 50.000 16.52 1.41 35.83 5.14
607 873 1.728425 GGCAACTTTAGTTCGTACGGG 59.272 52.381 16.52 0.35 35.83 5.28
608 874 2.406130 TGGCAACTTTAGTTCGTACGG 58.594 47.619 16.52 0.00 35.83 4.02
609 875 3.430895 ACATGGCAACTTTAGTTCGTACG 59.569 43.478 9.53 9.53 35.83 3.67
610 876 4.449743 TGACATGGCAACTTTAGTTCGTAC 59.550 41.667 0.00 0.00 35.83 3.67
611 877 4.633175 TGACATGGCAACTTTAGTTCGTA 58.367 39.130 0.00 0.00 35.83 3.43
612 878 3.472652 TGACATGGCAACTTTAGTTCGT 58.527 40.909 0.00 0.00 35.83 3.85
613 879 4.481930 TTGACATGGCAACTTTAGTTCG 57.518 40.909 10.79 0.00 35.83 3.95
614 880 5.173131 CGTTTTGACATGGCAACTTTAGTTC 59.827 40.000 15.21 0.00 35.83 3.01
615 881 5.040635 CGTTTTGACATGGCAACTTTAGTT 58.959 37.500 15.21 0.00 39.12 2.24
616 882 4.097286 ACGTTTTGACATGGCAACTTTAGT 59.903 37.500 15.21 7.34 37.61 2.24
617 883 4.606961 ACGTTTTGACATGGCAACTTTAG 58.393 39.130 15.21 6.68 37.61 1.85
618 884 4.640789 ACGTTTTGACATGGCAACTTTA 57.359 36.364 15.21 0.00 37.61 1.85
619 885 3.518634 ACGTTTTGACATGGCAACTTT 57.481 38.095 15.21 0.00 37.61 2.66
620 886 3.443976 GAACGTTTTGACATGGCAACTT 58.556 40.909 15.21 2.85 37.61 2.66
621 887 2.540769 CGAACGTTTTGACATGGCAACT 60.541 45.455 15.21 0.00 37.61 3.16
622 888 1.778591 CGAACGTTTTGACATGGCAAC 59.221 47.619 15.21 2.86 0.00 4.17
623 889 1.268794 CCGAACGTTTTGACATGGCAA 60.269 47.619 10.79 10.79 0.00 4.52
624 890 0.309302 CCGAACGTTTTGACATGGCA 59.691 50.000 0.00 0.00 0.00 4.92
625 891 0.386731 CCCGAACGTTTTGACATGGC 60.387 55.000 0.46 0.00 0.00 4.40
626 892 1.069500 GTCCCGAACGTTTTGACATGG 60.069 52.381 16.23 5.53 0.00 3.66
627 893 1.397945 CGTCCCGAACGTTTTGACATG 60.398 52.381 19.20 0.00 46.42 3.21
628 894 0.863144 CGTCCCGAACGTTTTGACAT 59.137 50.000 19.20 0.00 46.42 3.06
629 895 2.299562 CGTCCCGAACGTTTTGACA 58.700 52.632 19.20 0.00 46.42 3.58
638 904 1.153353 TTGAGCATTTCGTCCCGAAC 58.847 50.000 0.00 0.00 45.64 3.95
639 905 1.885560 TTTGAGCATTTCGTCCCGAA 58.114 45.000 0.00 0.00 44.28 4.30
640 906 2.006888 GATTTGAGCATTTCGTCCCGA 58.993 47.619 0.00 0.00 0.00 5.14
641 907 1.064060 GGATTTGAGCATTTCGTCCCG 59.936 52.381 0.00 0.00 0.00 5.14
642 908 1.405463 GGGATTTGAGCATTTCGTCCC 59.595 52.381 0.00 0.00 37.41 4.46
643 909 1.064060 CGGGATTTGAGCATTTCGTCC 59.936 52.381 0.00 0.00 0.00 4.79
644 910 2.006888 TCGGGATTTGAGCATTTCGTC 58.993 47.619 0.00 0.00 0.00 4.20
645 911 2.107950 TCGGGATTTGAGCATTTCGT 57.892 45.000 0.00 0.00 0.00 3.85
646 912 2.785679 GTTCGGGATTTGAGCATTTCG 58.214 47.619 0.00 0.00 0.00 3.46
647 913 2.161609 ACGTTCGGGATTTGAGCATTTC 59.838 45.455 0.00 0.00 0.00 2.17
648 914 2.159382 ACGTTCGGGATTTGAGCATTT 58.841 42.857 0.00 0.00 0.00 2.32
649 915 1.821216 ACGTTCGGGATTTGAGCATT 58.179 45.000 0.00 0.00 0.00 3.56
650 916 1.737793 GAACGTTCGGGATTTGAGCAT 59.262 47.619 13.36 0.00 0.00 3.79
651 917 1.153353 GAACGTTCGGGATTTGAGCA 58.847 50.000 13.36 0.00 0.00 4.26
652 918 0.094730 CGAACGTTCGGGATTTGAGC 59.905 55.000 36.53 4.05 46.30 4.26
663 929 1.089112 CCAATAACCCCCGAACGTTC 58.911 55.000 18.47 18.47 0.00 3.95
664 930 0.691904 TCCAATAACCCCCGAACGTT 59.308 50.000 0.00 0.00 0.00 3.99
665 931 0.913924 ATCCAATAACCCCCGAACGT 59.086 50.000 0.00 0.00 0.00 3.99
666 932 1.944709 GAATCCAATAACCCCCGAACG 59.055 52.381 0.00 0.00 0.00 3.95
667 933 2.304092 GGAATCCAATAACCCCCGAAC 58.696 52.381 0.00 0.00 0.00 3.95
668 934 1.923850 TGGAATCCAATAACCCCCGAA 59.076 47.619 0.00 0.00 0.00 4.30
669 935 1.597681 TGGAATCCAATAACCCCCGA 58.402 50.000 0.00 0.00 0.00 5.14
670 936 2.445682 TTGGAATCCAATAACCCCCG 57.554 50.000 11.23 0.00 38.75 5.73
671 937 4.358214 TCTTTTGGAATCCAATAACCCCC 58.642 43.478 16.30 0.00 43.55 5.40
672 938 6.367374 TTTCTTTTGGAATCCAATAACCCC 57.633 37.500 16.30 0.00 43.55 4.95
673 939 7.450074 ACTTTTCTTTTGGAATCCAATAACCC 58.550 34.615 16.30 0.00 43.55 4.11
674 940 8.902540 AACTTTTCTTTTGGAATCCAATAACC 57.097 30.769 16.30 0.00 43.55 2.85
676 942 8.835439 GCAAACTTTTCTTTTGGAATCCAATAA 58.165 29.630 16.30 11.53 43.55 1.40
677 943 7.443879 GGCAAACTTTTCTTTTGGAATCCAATA 59.556 33.333 16.30 10.25 43.55 1.90
678 944 6.262944 GGCAAACTTTTCTTTTGGAATCCAAT 59.737 34.615 16.30 0.00 43.55 3.16
679 945 5.588246 GGCAAACTTTTCTTTTGGAATCCAA 59.412 36.000 11.23 11.23 42.29 3.53
680 946 5.122519 GGCAAACTTTTCTTTTGGAATCCA 58.877 37.500 0.00 0.00 34.97 3.41
681 947 5.122519 TGGCAAACTTTTCTTTTGGAATCC 58.877 37.500 0.00 0.00 34.97 3.01
682 948 5.237127 CCTGGCAAACTTTTCTTTTGGAATC 59.763 40.000 0.00 0.00 34.97 2.52
683 949 5.104569 TCCTGGCAAACTTTTCTTTTGGAAT 60.105 36.000 0.00 0.00 34.97 3.01
684 950 4.223923 TCCTGGCAAACTTTTCTTTTGGAA 59.776 37.500 0.00 0.00 34.97 3.53
685 951 3.772025 TCCTGGCAAACTTTTCTTTTGGA 59.228 39.130 0.00 0.00 34.97 3.53
686 952 4.135747 TCCTGGCAAACTTTTCTTTTGG 57.864 40.909 0.00 0.00 34.97 3.28
687 953 6.493449 TTTTCCTGGCAAACTTTTCTTTTG 57.507 33.333 0.00 0.00 37.07 2.44
730 997 5.927819 AGCTCTGCTCTCTGCTAAATAATT 58.072 37.500 0.00 0.00 43.37 1.40
749 1016 0.319728 TTGACAGCCAGAGTGAGCTC 59.680 55.000 6.82 6.82 37.18 4.09
750 1017 0.982704 ATTGACAGCCAGAGTGAGCT 59.017 50.000 0.00 0.00 40.89 4.09
751 1018 1.085091 CATTGACAGCCAGAGTGAGC 58.915 55.000 0.00 0.00 0.00 4.26
752 1019 1.678123 CCCATTGACAGCCAGAGTGAG 60.678 57.143 0.00 0.00 0.00 3.51
753 1020 0.325933 CCCATTGACAGCCAGAGTGA 59.674 55.000 0.00 0.00 0.00 3.41
754 1021 1.310933 GCCCATTGACAGCCAGAGTG 61.311 60.000 0.00 0.00 0.00 3.51
755 1022 1.001641 GCCCATTGACAGCCAGAGT 60.002 57.895 0.00 0.00 0.00 3.24
774 1041 2.047274 GGCTGTCACGGCTGCTTA 60.047 61.111 8.93 0.00 35.82 3.09
829 1096 0.396556 TGGTGGATCGTAGCAGGCTA 60.397 55.000 0.00 0.00 0.00 3.93
830 1097 1.685765 TGGTGGATCGTAGCAGGCT 60.686 57.895 0.00 0.00 0.00 4.58
831 1098 1.521681 GTGGTGGATCGTAGCAGGC 60.522 63.158 1.31 0.00 0.00 4.85
832 1099 1.144057 GGTGGTGGATCGTAGCAGG 59.856 63.158 1.31 0.00 0.00 4.85
833 1100 1.226974 CGGTGGTGGATCGTAGCAG 60.227 63.158 1.31 0.00 0.00 4.24
834 1101 2.717044 CCGGTGGTGGATCGTAGCA 61.717 63.158 0.00 0.00 0.00 3.49
835 1102 2.106332 CCGGTGGTGGATCGTAGC 59.894 66.667 0.00 0.00 0.00 3.58
836 1103 1.436336 GACCGGTGGTGGATCGTAG 59.564 63.158 14.63 0.00 35.25 3.51
837 1104 2.409055 CGACCGGTGGTGGATCGTA 61.409 63.158 14.63 0.00 35.25 3.43
864 1131 1.004679 GGGGTGTCGCGTAGGAAAA 60.005 57.895 5.77 0.00 0.00 2.29
882 1149 2.490903 CTCCACCAATCTGCCTCTTTTG 59.509 50.000 0.00 0.00 0.00 2.44
887 1154 1.452833 GGCTCCACCAATCTGCCTC 60.453 63.158 0.00 0.00 40.36 4.70
1255 1546 3.777910 ACGGGGAATTCGACGGGG 61.778 66.667 19.90 4.33 0.00 5.73
1305 1600 2.395690 CAGCAATCCGTCGCGAAC 59.604 61.111 12.06 4.28 0.00 3.95
1326 1621 1.474330 GGGCCAATCCGAATTTCACT 58.526 50.000 4.39 0.00 34.94 3.41
1327 1622 0.459899 GGGGCCAATCCGAATTTCAC 59.540 55.000 4.39 0.00 34.94 3.18
1352 1647 4.164843 ACAGAACGGCCACCATTTATAT 57.835 40.909 2.24 0.00 0.00 0.86
1353 1648 3.637911 ACAGAACGGCCACCATTTATA 57.362 42.857 2.24 0.00 0.00 0.98
1356 1651 1.883926 GTAACAGAACGGCCACCATTT 59.116 47.619 2.24 0.00 0.00 2.32
1357 1652 1.202830 TGTAACAGAACGGCCACCATT 60.203 47.619 2.24 0.00 0.00 3.16
1359 1654 0.398696 ATGTAACAGAACGGCCACCA 59.601 50.000 2.24 0.00 0.00 4.17
1360 1655 1.199097 CAATGTAACAGAACGGCCACC 59.801 52.381 2.24 0.00 0.00 4.61
1361 1656 1.401018 GCAATGTAACAGAACGGCCAC 60.401 52.381 2.24 0.00 0.00 5.01
1364 1659 0.515564 ACGCAATGTAACAGAACGGC 59.484 50.000 0.00 0.00 0.00 5.68
1365 1660 1.724654 GCACGCAATGTAACAGAACGG 60.725 52.381 0.00 0.00 0.00 4.44
1366 1661 1.194547 AGCACGCAATGTAACAGAACG 59.805 47.619 0.00 0.00 0.00 3.95
1368 1663 5.621197 ATTTAGCACGCAATGTAACAGAA 57.379 34.783 0.00 0.00 0.00 3.02
1369 1664 5.389778 CAATTTAGCACGCAATGTAACAGA 58.610 37.500 0.00 0.00 0.00 3.41
1370 1665 4.030529 GCAATTTAGCACGCAATGTAACAG 59.969 41.667 0.00 0.00 0.00 3.16
1371 1666 3.917380 GCAATTTAGCACGCAATGTAACA 59.083 39.130 0.00 0.00 0.00 2.41
1372 1667 4.165779 AGCAATTTAGCACGCAATGTAAC 58.834 39.130 0.00 0.00 36.85 2.50
1373 1668 4.433186 AGCAATTTAGCACGCAATGTAA 57.567 36.364 0.00 0.00 36.85 2.41
1374 1669 4.433186 AAGCAATTTAGCACGCAATGTA 57.567 36.364 0.00 0.00 36.85 2.29
1478 1779 4.785346 ATGAAGCTGACATGGATAACCT 57.215 40.909 0.00 0.00 37.04 3.50
1479 1780 6.939163 AGAATATGAAGCTGACATGGATAACC 59.061 38.462 14.38 0.00 0.00 2.85
1492 1793 5.674525 TCCAAATCGACAGAATATGAAGCT 58.325 37.500 0.00 0.00 0.00 3.74
1497 1798 9.229784 CTTGAAATTCCAAATCGACAGAATATG 57.770 33.333 0.00 0.00 0.00 1.78
1709 2012 7.291411 ACCTAACTACCTAAGTGCATATCTG 57.709 40.000 0.00 0.00 38.88 2.90
1749 2052 7.487829 GTGACAAGACTAAGAAAATTTGTGCAA 59.512 33.333 0.00 0.00 0.00 4.08
1761 2064 7.761038 TGTATTCAGAGTGACAAGACTAAGA 57.239 36.000 0.00 0.00 0.00 2.10
1762 2065 8.867935 CAATGTATTCAGAGTGACAAGACTAAG 58.132 37.037 0.00 0.00 0.00 2.18
1766 2297 5.163814 GGCAATGTATTCAGAGTGACAAGAC 60.164 44.000 0.00 0.00 0.00 3.01
1783 2316 5.594317 GTGGAAGGATAATACAAGGCAATGT 59.406 40.000 1.57 1.57 37.32 2.71
1991 2524 6.405278 ACCATGCAAGCTTTAAGTTAAGTT 57.595 33.333 0.00 0.37 0.00 2.66
2036 2569 8.408601 CACTATGGGAAAGAAACAATGGATTAG 58.591 37.037 0.00 0.00 0.00 1.73
2199 2732 3.197766 CCTACATACCAGGCTCTTGTTGA 59.802 47.826 0.00 0.00 0.00 3.18
2359 2892 6.767524 AAGAGTCGAGTCACTTCATAGAAT 57.232 37.500 21.89 0.00 0.00 2.40
2380 2913 7.615582 TCCTAGCAGAACATTCAAACATAAG 57.384 36.000 0.00 0.00 0.00 1.73
2427 2960 3.603532 ACATGACGACAATCATCAGCTT 58.396 40.909 0.00 0.00 37.20 3.74
2428 2961 3.257469 ACATGACGACAATCATCAGCT 57.743 42.857 0.00 0.00 37.20 4.24
2429 2962 5.663795 ATAACATGACGACAATCATCAGC 57.336 39.130 0.00 0.00 37.20 4.26
2430 2963 8.754230 AGATATAACATGACGACAATCATCAG 57.246 34.615 0.00 0.00 37.20 2.90
2454 2987 4.580995 CGCATGGGGTATCCTCTAGTATAG 59.419 50.000 0.89 0.00 41.04 1.31
2455 2988 4.017775 ACGCATGGGGTATCCTCTAGTATA 60.018 45.833 14.94 0.00 36.20 1.47
2456 2989 3.245658 ACGCATGGGGTATCCTCTAGTAT 60.246 47.826 14.94 0.00 36.20 2.12
2457 2990 2.109480 ACGCATGGGGTATCCTCTAGTA 59.891 50.000 14.94 0.00 36.20 1.82
2458 2991 1.133136 ACGCATGGGGTATCCTCTAGT 60.133 52.381 14.94 0.00 36.20 2.57
2459 2992 1.633774 ACGCATGGGGTATCCTCTAG 58.366 55.000 14.94 0.00 36.20 2.43
2460 2993 1.691976 CAACGCATGGGGTATCCTCTA 59.308 52.381 14.94 0.00 36.20 2.43
2461 2994 0.469917 CAACGCATGGGGTATCCTCT 59.530 55.000 14.94 0.00 36.20 3.69
2462 2995 1.166531 GCAACGCATGGGGTATCCTC 61.167 60.000 14.94 0.00 36.20 3.71
2463 2996 1.152963 GCAACGCATGGGGTATCCT 60.153 57.895 14.94 0.00 36.20 3.24
2464 2997 1.152963 AGCAACGCATGGGGTATCC 60.153 57.895 14.94 0.00 0.00 2.59
2465 2998 2.024918 CAGCAACGCATGGGGTATC 58.975 57.895 14.94 3.03 0.00 2.24
2466 2999 2.120909 GCAGCAACGCATGGGGTAT 61.121 57.895 14.94 0.00 0.00 2.73
2467 3000 2.749839 GCAGCAACGCATGGGGTA 60.750 61.111 14.94 0.00 0.00 3.69
2472 3005 2.546645 AATTCCCGCAGCAACGCATG 62.547 55.000 0.00 0.00 0.00 4.06
2712 3294 3.957671 ATCTCAACATGCAAGCATACG 57.042 42.857 7.29 0.00 34.91 3.06
2713 3295 9.390795 CTTATTTATCTCAACATGCAAGCATAC 57.609 33.333 7.29 0.00 34.91 2.39
2760 3342 9.203163 GAGGGCATAAAGTGTATCCTATATACT 57.797 37.037 0.00 0.00 0.00 2.12
2891 3473 9.696917 GTCAAAGAGGTTCAAAATAAATGTCAT 57.303 29.630 0.00 0.00 0.00 3.06
3113 3695 1.953559 TCTCCACAGCTTGTTGTCAC 58.046 50.000 0.00 0.00 0.00 3.67
3114 3696 2.708216 TTCTCCACAGCTTGTTGTCA 57.292 45.000 0.00 0.00 0.00 3.58
3140 3722 2.152016 ACGTGCTAAAGAAAAGGGAGC 58.848 47.619 0.00 0.00 0.00 4.70
3207 3789 2.628178 CTGCGGGAGAATACCATGACTA 59.372 50.000 0.00 0.00 0.00 2.59
3222 3804 2.154462 GGATCCACATTATTCTGCGGG 58.846 52.381 6.95 0.00 0.00 6.13
3223 3805 2.810274 CTGGATCCACATTATTCTGCGG 59.190 50.000 11.44 0.00 0.00 5.69
3347 3929 5.231702 TGTTTAGAGGGGAACGTTGTAAT 57.768 39.130 5.00 0.00 0.00 1.89
3408 3990 1.971481 TGCTCTATTTGATGCGGCAT 58.029 45.000 16.65 16.65 0.00 4.40
3525 4107 1.157870 CGCATAAGGTAACAGGGGCG 61.158 60.000 0.00 0.00 39.29 6.13
3544 4126 6.817184 TGACCATAAGATAGAAGCACTTACC 58.183 40.000 0.00 0.00 0.00 2.85
3695 4277 7.765695 ACAATGGAATATCAAGTGAAAGTGT 57.234 32.000 0.00 0.00 0.00 3.55
3936 4518 1.599419 GCGTGAATGTTTGGTGTCCAC 60.599 52.381 0.00 0.00 30.78 4.02
3947 4529 5.212194 GTGAATTTACAACAGCGTGAATGT 58.788 37.500 0.00 0.00 0.00 2.71
4394 5693 7.710907 GGACTACATACATAGCAAAATGAGTGA 59.289 37.037 1.26 0.00 0.00 3.41
4408 5707 7.620094 AGAGACTACAAAAGGGACTACATACAT 59.380 37.037 0.00 0.00 38.49 2.29
4409 5708 6.952358 AGAGACTACAAAAGGGACTACATACA 59.048 38.462 0.00 0.00 38.49 2.29
4438 5737 6.364701 TGCAGCCCACTTAAATATATGTCTT 58.635 36.000 0.00 0.00 0.00 3.01
4443 5742 7.079451 ACTACTGCAGCCCACTTAAATATAT 57.921 36.000 15.27 0.00 0.00 0.86
4452 5751 0.608640 GTGTACTACTGCAGCCCACT 59.391 55.000 15.27 0.00 0.00 4.00
4454 5753 1.550130 GGGTGTACTACTGCAGCCCA 61.550 60.000 15.27 0.12 44.78 5.36
4455 5754 1.221021 GGGTGTACTACTGCAGCCC 59.779 63.158 15.27 10.74 44.78 5.19
4456 5755 4.934989 GGGTGTACTACTGCAGCC 57.065 61.111 15.27 4.52 44.42 4.85
4466 5794 4.035208 GCAAGTATATGCAACTGGGTGTAC 59.965 45.833 0.00 0.00 45.70 2.90
4596 6498 4.514401 ACCTGCATACCTTAGTTGCTAAC 58.486 43.478 0.00 0.00 37.28 2.34
4617 6519 5.635700 GGATGTCACTACTCTTTCACTGAAC 59.364 44.000 0.00 0.00 0.00 3.18
4658 6560 4.351874 TTTAGCTGCACCTCAGTTTACT 57.648 40.909 1.02 0.00 44.66 2.24
4750 6724 6.780457 AAAATATTCCAGGGTCACATTCTG 57.220 37.500 0.00 0.00 0.00 3.02
4791 6838 6.100279 TGCATGGATTATCCTAGGGTCATATC 59.900 42.308 12.91 6.09 37.46 1.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.