Multiple sequence alignment - TraesCS1B01G360300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G360300 chr1B 100.000 2798 0 0 1 2798 588823669 588820872 0.000000e+00 5168.0
1 TraesCS1B01G360300 chr1B 96.296 54 2 0 2737 2790 327964225 327964278 3.840000e-14 89.8
2 TraesCS1B01G360300 chr1D 90.875 1874 106 40 563 2417 435535992 435534165 0.000000e+00 2453.0
3 TraesCS1B01G360300 chr1D 90.038 261 19 4 246 500 435536361 435536102 5.780000e-87 331.0
4 TraesCS1B01G360300 chr1D 87.179 195 14 4 2450 2634 435510162 435509969 7.850000e-51 211.0
5 TraesCS1B01G360300 chr1D 86.667 195 15 4 2450 2634 435511048 435510855 3.650000e-49 206.0
6 TraesCS1B01G360300 chr1D 80.465 215 16 11 2444 2634 435530095 435529883 1.040000e-29 141.0
7 TraesCS1B01G360300 chr1D 84.892 139 12 5 2504 2634 435512052 435511915 6.290000e-27 132.0
8 TraesCS1B01G360300 chr1D 97.059 68 2 0 2450 2517 435526789 435526722 6.330000e-22 115.0
9 TraesCS1B01G360300 chr1D 85.437 103 14 1 2532 2634 435518143 435518042 3.810000e-19 106.0
10 TraesCS1B01G360300 chr1D 98.246 57 1 0 2450 2506 435517175 435517119 1.770000e-17 100.0
11 TraesCS1B01G360300 chr1A 88.791 1472 71 31 904 2340 532968551 532967139 0.000000e+00 1718.0
12 TraesCS1B01G360300 chr1A 84.406 404 29 16 186 567 532970070 532969679 1.580000e-97 366.0
13 TraesCS1B01G360300 chr1A 95.197 229 7 4 619 843 532969204 532968976 2.650000e-95 359.0
14 TraesCS1B01G360300 chr6A 95.122 41 0 2 2596 2634 35635028 35634988 2.330000e-06 63.9
15 TraesCS1B01G360300 chr5A 94.872 39 2 0 2596 2634 569791416 569791454 8.370000e-06 62.1
16 TraesCS1B01G360300 chr5A 97.297 37 0 1 2602 2638 669627661 669627626 8.370000e-06 62.1
17 TraesCS1B01G360300 chr4A 93.023 43 2 1 2595 2637 685299716 685299757 8.370000e-06 62.1
18 TraesCS1B01G360300 chr4A 90.698 43 4 0 2594 2636 438448009 438448051 1.080000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G360300 chr1B 588820872 588823669 2797 True 5168.000000 5168 100.000000 1 2798 1 chr1B.!!$R1 2797
1 TraesCS1B01G360300 chr1D 435534165 435536361 2196 True 1392.000000 2453 90.456500 246 2417 2 chr1D.!!$R4 2171
2 TraesCS1B01G360300 chr1A 532967139 532970070 2931 True 814.333333 1718 89.464667 186 2340 3 chr1A.!!$R1 2154

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 475 0.179059 TCCACGCACTGCTCAGAAAA 60.179 50.0 3.6 0.0 0.0 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 3067 0.671781 CCGCTAGCTGCACTTGAAGT 60.672 55.0 13.93 0.0 43.06 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.927933 GTGCCAAACATTAACACACTATTC 57.072 37.500 0.00 0.00 0.00 1.75
24 25 6.442952 GTGCCAAACATTAACACACTATTCA 58.557 36.000 0.00 0.00 0.00 2.57
25 26 6.920758 GTGCCAAACATTAACACACTATTCAA 59.079 34.615 0.00 0.00 0.00 2.69
26 27 7.598493 GTGCCAAACATTAACACACTATTCAAT 59.402 33.333 0.00 0.00 0.00 2.57
27 28 7.598118 TGCCAAACATTAACACACTATTCAATG 59.402 33.333 0.00 0.00 0.00 2.82
28 29 7.411804 GCCAAACATTAACACACTATTCAATGC 60.412 37.037 0.00 0.00 0.00 3.56
29 30 7.814107 CCAAACATTAACACACTATTCAATGCT 59.186 33.333 0.00 0.00 0.00 3.79
30 31 8.641155 CAAACATTAACACACTATTCAATGCTG 58.359 33.333 0.00 0.00 0.00 4.41
31 32 7.686438 ACATTAACACACTATTCAATGCTGA 57.314 32.000 0.00 0.00 0.00 4.26
32 33 8.109705 ACATTAACACACTATTCAATGCTGAA 57.890 30.769 0.00 0.00 45.53 3.02
68 69 8.942338 TTTTTAGCTCATATCTCGTAATGTGT 57.058 30.769 0.00 0.00 0.00 3.72
69 70 8.942338 TTTTAGCTCATATCTCGTAATGTGTT 57.058 30.769 0.00 0.00 0.00 3.32
70 71 8.942338 TTTAGCTCATATCTCGTAATGTGTTT 57.058 30.769 0.00 0.00 0.00 2.83
71 72 8.942338 TTAGCTCATATCTCGTAATGTGTTTT 57.058 30.769 0.00 0.00 0.00 2.43
72 73 7.470289 AGCTCATATCTCGTAATGTGTTTTC 57.530 36.000 0.00 0.00 0.00 2.29
73 74 7.041721 AGCTCATATCTCGTAATGTGTTTTCA 58.958 34.615 0.00 0.00 0.00 2.69
74 75 7.549134 AGCTCATATCTCGTAATGTGTTTTCAA 59.451 33.333 0.00 0.00 0.00 2.69
75 76 7.636359 GCTCATATCTCGTAATGTGTTTTCAAC 59.364 37.037 0.00 0.00 0.00 3.18
76 77 8.771920 TCATATCTCGTAATGTGTTTTCAACT 57.228 30.769 0.00 0.00 0.00 3.16
77 78 9.214957 TCATATCTCGTAATGTGTTTTCAACTT 57.785 29.630 0.00 0.00 0.00 2.66
88 89 9.959749 AATGTGTTTTCAACTTATAATTCGTGT 57.040 25.926 0.00 0.00 0.00 4.49
89 90 8.775220 TGTGTTTTCAACTTATAATTCGTGTG 57.225 30.769 0.00 0.00 0.00 3.82
90 91 7.858382 TGTGTTTTCAACTTATAATTCGTGTGG 59.142 33.333 0.00 0.00 0.00 4.17
91 92 6.858993 TGTTTTCAACTTATAATTCGTGTGGC 59.141 34.615 0.00 0.00 0.00 5.01
92 93 5.554822 TTCAACTTATAATTCGTGTGGCC 57.445 39.130 0.00 0.00 0.00 5.36
93 94 4.580868 TCAACTTATAATTCGTGTGGCCA 58.419 39.130 0.00 0.00 0.00 5.36
94 95 5.189928 TCAACTTATAATTCGTGTGGCCAT 58.810 37.500 9.72 0.00 0.00 4.40
95 96 6.350103 TCAACTTATAATTCGTGTGGCCATA 58.650 36.000 9.72 1.91 0.00 2.74
96 97 6.824196 TCAACTTATAATTCGTGTGGCCATAA 59.176 34.615 9.72 1.48 0.00 1.90
97 98 7.337184 TCAACTTATAATTCGTGTGGCCATAAA 59.663 33.333 9.72 0.00 0.00 1.40
98 99 7.259290 ACTTATAATTCGTGTGGCCATAAAG 57.741 36.000 9.72 6.73 0.00 1.85
99 100 2.939460 AATTCGTGTGGCCATAAAGC 57.061 45.000 9.72 0.00 0.00 3.51
100 101 1.832883 ATTCGTGTGGCCATAAAGCA 58.167 45.000 9.72 0.00 0.00 3.91
101 102 1.832883 TTCGTGTGGCCATAAAGCAT 58.167 45.000 9.72 0.00 0.00 3.79
102 103 1.378531 TCGTGTGGCCATAAAGCATC 58.621 50.000 9.72 0.00 0.00 3.91
103 104 1.093972 CGTGTGGCCATAAAGCATCA 58.906 50.000 9.72 0.00 0.00 3.07
104 105 1.202177 CGTGTGGCCATAAAGCATCAC 60.202 52.381 9.72 8.89 35.79 3.06
105 106 2.094675 GTGTGGCCATAAAGCATCACT 58.905 47.619 9.72 0.00 36.04 3.41
106 107 2.098117 GTGTGGCCATAAAGCATCACTC 59.902 50.000 9.72 0.00 36.04 3.51
107 108 2.025981 TGTGGCCATAAAGCATCACTCT 60.026 45.455 9.72 0.00 0.00 3.24
108 109 2.615912 GTGGCCATAAAGCATCACTCTC 59.384 50.000 9.72 0.00 0.00 3.20
109 110 2.507058 TGGCCATAAAGCATCACTCTCT 59.493 45.455 0.00 0.00 0.00 3.10
110 111 3.054139 TGGCCATAAAGCATCACTCTCTT 60.054 43.478 0.00 0.00 0.00 2.85
111 112 4.164030 TGGCCATAAAGCATCACTCTCTTA 59.836 41.667 0.00 0.00 0.00 2.10
112 113 5.126067 GGCCATAAAGCATCACTCTCTTAA 58.874 41.667 0.00 0.00 0.00 1.85
113 114 5.008118 GGCCATAAAGCATCACTCTCTTAAC 59.992 44.000 0.00 0.00 0.00 2.01
114 115 5.586243 GCCATAAAGCATCACTCTCTTAACA 59.414 40.000 0.00 0.00 0.00 2.41
115 116 6.261826 GCCATAAAGCATCACTCTCTTAACAT 59.738 38.462 0.00 0.00 0.00 2.71
116 117 7.519649 GCCATAAAGCATCACTCTCTTAACATC 60.520 40.741 0.00 0.00 0.00 3.06
117 118 7.714377 CCATAAAGCATCACTCTCTTAACATCT 59.286 37.037 0.00 0.00 0.00 2.90
118 119 8.763356 CATAAAGCATCACTCTCTTAACATCTC 58.237 37.037 0.00 0.00 0.00 2.75
119 120 5.929058 AGCATCACTCTCTTAACATCTCA 57.071 39.130 0.00 0.00 0.00 3.27
120 121 6.482898 AGCATCACTCTCTTAACATCTCAT 57.517 37.500 0.00 0.00 0.00 2.90
121 122 6.514947 AGCATCACTCTCTTAACATCTCATC 58.485 40.000 0.00 0.00 0.00 2.92
122 123 6.324512 AGCATCACTCTCTTAACATCTCATCT 59.675 38.462 0.00 0.00 0.00 2.90
123 124 6.642131 GCATCACTCTCTTAACATCTCATCTC 59.358 42.308 0.00 0.00 0.00 2.75
124 125 6.707440 TCACTCTCTTAACATCTCATCTCC 57.293 41.667 0.00 0.00 0.00 3.71
125 126 6.430864 TCACTCTCTTAACATCTCATCTCCT 58.569 40.000 0.00 0.00 0.00 3.69
126 127 6.894654 TCACTCTCTTAACATCTCATCTCCTT 59.105 38.462 0.00 0.00 0.00 3.36
127 128 7.398618 TCACTCTCTTAACATCTCATCTCCTTT 59.601 37.037 0.00 0.00 0.00 3.11
128 129 8.040132 CACTCTCTTAACATCTCATCTCCTTTT 58.960 37.037 0.00 0.00 0.00 2.27
129 130 8.257306 ACTCTCTTAACATCTCATCTCCTTTTC 58.743 37.037 0.00 0.00 0.00 2.29
130 131 8.372877 TCTCTTAACATCTCATCTCCTTTTCT 57.627 34.615 0.00 0.00 0.00 2.52
131 132 8.474025 TCTCTTAACATCTCATCTCCTTTTCTC 58.526 37.037 0.00 0.00 0.00 2.87
132 133 8.138928 TCTTAACATCTCATCTCCTTTTCTCA 57.861 34.615 0.00 0.00 0.00 3.27
133 134 8.256605 TCTTAACATCTCATCTCCTTTTCTCAG 58.743 37.037 0.00 0.00 0.00 3.35
134 135 6.617782 AACATCTCATCTCCTTTTCTCAGA 57.382 37.500 0.00 0.00 0.00 3.27
135 136 6.811634 ACATCTCATCTCCTTTTCTCAGAT 57.188 37.500 0.00 0.00 0.00 2.90
136 137 7.197901 ACATCTCATCTCCTTTTCTCAGATT 57.802 36.000 0.00 0.00 0.00 2.40
137 138 8.316497 ACATCTCATCTCCTTTTCTCAGATTA 57.684 34.615 0.00 0.00 0.00 1.75
138 139 8.936787 ACATCTCATCTCCTTTTCTCAGATTAT 58.063 33.333 0.00 0.00 0.00 1.28
139 140 9.781633 CATCTCATCTCCTTTTCTCAGATTATT 57.218 33.333 0.00 0.00 0.00 1.40
143 144 9.964354 TCATCTCCTTTTCTCAGATTATTTTGA 57.036 29.630 0.00 0.00 0.00 2.69
146 147 9.014297 TCTCCTTTTCTCAGATTATTTTGAACC 57.986 33.333 0.00 0.00 0.00 3.62
147 148 8.940397 TCCTTTTCTCAGATTATTTTGAACCT 57.060 30.769 0.00 0.00 0.00 3.50
148 149 9.367160 TCCTTTTCTCAGATTATTTTGAACCTT 57.633 29.630 0.00 0.00 0.00 3.50
149 150 9.631452 CCTTTTCTCAGATTATTTTGAACCTTC 57.369 33.333 0.00 0.00 0.00 3.46
150 151 9.631452 CTTTTCTCAGATTATTTTGAACCTTCC 57.369 33.333 0.00 0.00 0.00 3.46
151 152 7.703058 TTCTCAGATTATTTTGAACCTTCCC 57.297 36.000 0.00 0.00 0.00 3.97
152 153 6.789268 TCTCAGATTATTTTGAACCTTCCCA 58.211 36.000 0.00 0.00 0.00 4.37
153 154 7.237982 TCTCAGATTATTTTGAACCTTCCCAA 58.762 34.615 0.00 0.00 0.00 4.12
154 155 7.176690 TCTCAGATTATTTTGAACCTTCCCAAC 59.823 37.037 0.00 0.00 0.00 3.77
155 156 6.072175 TCAGATTATTTTGAACCTTCCCAACG 60.072 38.462 0.00 0.00 0.00 4.10
156 157 5.773176 AGATTATTTTGAACCTTCCCAACGT 59.227 36.000 0.00 0.00 0.00 3.99
157 158 3.726291 ATTTTGAACCTTCCCAACGTG 57.274 42.857 0.00 0.00 0.00 4.49
158 159 2.421751 TTTGAACCTTCCCAACGTGA 57.578 45.000 0.00 0.00 0.00 4.35
159 160 2.649531 TTGAACCTTCCCAACGTGAT 57.350 45.000 0.00 0.00 0.00 3.06
160 161 2.649531 TGAACCTTCCCAACGTGATT 57.350 45.000 0.00 0.00 0.00 2.57
161 162 2.938838 TGAACCTTCCCAACGTGATTT 58.061 42.857 0.00 0.00 0.00 2.17
162 163 3.292460 TGAACCTTCCCAACGTGATTTT 58.708 40.909 0.00 0.00 0.00 1.82
163 164 3.316868 TGAACCTTCCCAACGTGATTTTC 59.683 43.478 0.00 0.00 0.00 2.29
164 165 2.938838 ACCTTCCCAACGTGATTTTCA 58.061 42.857 0.00 0.00 0.00 2.69
165 166 2.621526 ACCTTCCCAACGTGATTTTCAC 59.378 45.455 0.00 0.00 43.65 3.18
213 214 1.269413 ACGTTATATTCTCCCGCGTGG 60.269 52.381 8.42 8.42 0.00 4.94
240 242 1.160137 GTTTCTTGAGTCGGCAGCAT 58.840 50.000 0.00 0.00 0.00 3.79
286 288 2.856032 CGCTCGAGCACAGTTTGG 59.144 61.111 34.69 13.81 42.21 3.28
293 295 3.359002 GCACAGTTTGGGCTCCAG 58.641 61.111 0.00 0.00 45.01 3.86
336 338 2.029518 CCGTGAGCTGTGAGCACA 59.970 61.111 3.02 3.02 45.56 4.57
361 369 3.015293 GACACATCGCCTGCGTGTG 62.015 63.158 28.49 28.49 43.65 3.82
363 371 2.433145 ACATCGCCTGCGTGTGAG 60.433 61.111 20.15 7.81 40.74 3.51
396 404 1.433534 GAAACCTCACAAGCTCCTCG 58.566 55.000 0.00 0.00 0.00 4.63
449 457 4.148348 GCACTCGTAATCAATACCGTCATC 59.852 45.833 0.00 0.00 0.00 2.92
467 475 0.179059 TCCACGCACTGCTCAGAAAA 60.179 50.000 3.60 0.00 0.00 2.29
476 486 4.553547 GCACTGCTCAGAAAACACAAGTAG 60.554 45.833 3.60 0.00 0.00 2.57
490 500 3.121944 CACAAGTAGCTTCATCACACGTC 59.878 47.826 0.00 0.00 0.00 4.34
504 514 2.420628 CACGTCAGGTGTACGGTAAA 57.579 50.000 0.00 0.00 44.48 2.01
505 515 2.053627 CACGTCAGGTGTACGGTAAAC 58.946 52.381 0.00 0.00 44.48 2.01
506 516 1.956477 ACGTCAGGTGTACGGTAAACT 59.044 47.619 8.31 0.00 44.48 2.66
507 517 2.362077 ACGTCAGGTGTACGGTAAACTT 59.638 45.455 8.31 0.00 44.48 2.66
525 589 1.792367 CTTTAAACTTTTGCCCAGCGC 59.208 47.619 0.00 0.00 38.31 5.92
561 637 1.626356 CCTCTGCTCCCGGAAATGGA 61.626 60.000 0.73 0.00 0.00 3.41
585 678 0.600255 CGCCCCTGATTAGCCGTAAG 60.600 60.000 0.00 0.00 0.00 2.34
625 1127 7.787904 AGTCTATCTAGTCTGGTCTAGAAGAGA 59.212 40.741 0.00 9.69 45.97 3.10
628 1130 7.875327 ATCTAGTCTGGTCTAGAAGAGAAAC 57.125 40.000 0.00 0.00 45.97 2.78
918 1800 2.348998 CTGCTCCCTCACACCACC 59.651 66.667 0.00 0.00 0.00 4.61
919 1801 2.447572 TGCTCCCTCACACCACCA 60.448 61.111 0.00 0.00 0.00 4.17
926 1808 1.526887 CTCACACCACCACACCACT 59.473 57.895 0.00 0.00 0.00 4.00
933 1815 1.701031 CCACCACACCACTACCACCA 61.701 60.000 0.00 0.00 0.00 4.17
966 1851 4.295119 ACGGCGTGTCACACCTCC 62.295 66.667 13.76 3.00 0.00 4.30
971 1856 1.587054 CGTGTCACACCTCCCTCTC 59.413 63.158 1.24 0.00 0.00 3.20
982 1867 0.998945 CTCCCTCTCTCCCTCTCCCT 60.999 65.000 0.00 0.00 0.00 4.20
1174 2071 4.039357 CTGCCGTCGACACCGAGT 62.039 66.667 17.16 0.00 46.52 4.18
1257 2154 4.436998 CGGAGCCACGACTGGACC 62.437 72.222 0.00 0.00 40.55 4.46
1634 2537 2.187946 GATGAGGTGGCTGGACGG 59.812 66.667 0.00 0.00 0.00 4.79
1647 2550 2.408022 GACGGCATAGACGACGCT 59.592 61.111 0.00 0.00 35.20 5.07
1805 2714 3.943381 GAGCTGGTCATGTGATCAATCAA 59.057 43.478 0.00 0.00 38.75 2.57
1808 2717 4.201891 GCTGGTCATGTGATCAATCAAGAC 60.202 45.833 11.31 11.31 38.75 3.01
1829 2738 4.666253 GAAGCCCCACCAGCAGCA 62.666 66.667 0.00 0.00 0.00 4.41
1925 2838 7.730364 AGCAACCTATTAATTCTACCATTCG 57.270 36.000 0.00 0.00 0.00 3.34
1930 2843 5.929992 CCTATTAATTCTACCATTCGCGGAA 59.070 40.000 6.13 0.00 0.00 4.30
1931 2844 5.668558 ATTAATTCTACCATTCGCGGAAC 57.331 39.130 6.13 0.00 0.00 3.62
2057 2975 1.305201 TTTTGTCCGAGACCAGCAAC 58.695 50.000 2.23 0.00 0.00 4.17
2070 2988 2.295070 ACCAGCAACGGTTTTGGATTAC 59.705 45.455 21.65 0.00 34.91 1.89
2084 3002 7.817478 GGTTTTGGATTACTTGGAACTAAATGG 59.183 37.037 0.00 0.00 0.00 3.16
2085 3003 8.364894 GTTTTGGATTACTTGGAACTAAATGGT 58.635 33.333 0.00 0.00 0.00 3.55
2097 3015 5.186992 GGAACTAAATGGTTGTAATGGGCTT 59.813 40.000 0.00 0.00 0.00 4.35
2122 3040 1.200519 CCTCCCCCTGTTTCGTGATA 58.799 55.000 0.00 0.00 0.00 2.15
2175 3093 2.573869 GCAGCTAGCGGTGTCTCA 59.426 61.111 16.41 0.00 40.67 3.27
2246 3165 0.615331 TTCTGCAAGGATCGGCTCTT 59.385 50.000 0.00 0.00 0.00 2.85
2285 3204 5.538433 GGTCTCTTTCCTATGTGAGCTATCT 59.462 44.000 0.00 0.00 0.00 1.98
2289 3208 2.962859 TCCTATGTGAGCTATCTGGCA 58.037 47.619 0.00 0.00 34.17 4.92
2290 3209 3.514539 TCCTATGTGAGCTATCTGGCAT 58.485 45.455 0.00 0.00 34.17 4.40
2291 3210 3.906218 TCCTATGTGAGCTATCTGGCATT 59.094 43.478 0.00 0.00 34.17 3.56
2292 3211 4.020751 TCCTATGTGAGCTATCTGGCATTC 60.021 45.833 0.00 0.00 34.17 2.67
2293 3212 4.020396 CCTATGTGAGCTATCTGGCATTCT 60.020 45.833 0.00 0.00 34.17 2.40
2294 3213 3.189618 TGTGAGCTATCTGGCATTCTG 57.810 47.619 0.00 0.00 34.17 3.02
2295 3214 2.158856 TGTGAGCTATCTGGCATTCTGG 60.159 50.000 0.00 0.00 34.17 3.86
2296 3215 1.202734 TGAGCTATCTGGCATTCTGGC 60.203 52.381 0.00 0.00 44.03 4.85
2335 3254 0.319040 TCAAGCACTCACGCTCAGTC 60.319 55.000 0.00 0.00 42.89 3.51
2340 3259 0.727457 CACTCACGCTCAGTCAGTCG 60.727 60.000 0.00 0.00 0.00 4.18
2341 3260 1.154131 CTCACGCTCAGTCAGTCGG 60.154 63.158 0.00 0.00 0.00 4.79
2342 3261 1.857318 CTCACGCTCAGTCAGTCGGT 61.857 60.000 0.00 0.00 0.00 4.69
2343 3262 1.442857 CACGCTCAGTCAGTCGGTC 60.443 63.158 0.00 0.00 0.00 4.79
2344 3263 2.202362 CGCTCAGTCAGTCGGTCG 60.202 66.667 0.00 0.00 0.00 4.79
2363 3282 2.095567 TCGCAGCTTGCTTGAATTCTTC 60.096 45.455 7.05 0.00 42.25 2.87
2370 3289 4.978580 GCTTGCTTGAATTCTTCGACTTTT 59.021 37.500 7.05 0.00 0.00 2.27
2376 3295 9.773328 TGCTTGAATTCTTCGACTTTTTATATG 57.227 29.630 7.05 0.00 0.00 1.78
2377 3296 9.988350 GCTTGAATTCTTCGACTTTTTATATGA 57.012 29.630 7.05 0.00 0.00 2.15
2400 3322 2.586648 AATCGGAGGAAAGCCACTTT 57.413 45.000 0.00 0.00 36.29 2.66
2407 3329 3.639561 GGAGGAAAGCCACTTTTACCAAA 59.360 43.478 0.00 0.00 33.49 3.28
2424 3346 9.490379 TTTTACCAAAAGAGAAGAGCTTACTAG 57.510 33.333 0.00 0.00 0.00 2.57
2425 3347 6.919775 ACCAAAAGAGAAGAGCTTACTAGA 57.080 37.500 0.00 0.00 0.00 2.43
2426 3348 7.304497 ACCAAAAGAGAAGAGCTTACTAGAA 57.696 36.000 0.00 0.00 0.00 2.10
2427 3349 7.736893 ACCAAAAGAGAAGAGCTTACTAGAAA 58.263 34.615 0.00 0.00 0.00 2.52
2428 3350 7.875554 ACCAAAAGAGAAGAGCTTACTAGAAAG 59.124 37.037 0.00 0.00 0.00 2.62
2429 3351 8.091449 CCAAAAGAGAAGAGCTTACTAGAAAGA 58.909 37.037 0.00 0.00 0.00 2.52
2430 3352 9.482627 CAAAAGAGAAGAGCTTACTAGAAAGAA 57.517 33.333 0.00 0.00 0.00 2.52
2431 3353 9.705290 AAAAGAGAAGAGCTTACTAGAAAGAAG 57.295 33.333 0.00 0.00 0.00 2.85
2432 3354 8.644374 AAGAGAAGAGCTTACTAGAAAGAAGA 57.356 34.615 0.00 0.00 0.00 2.87
2433 3355 8.281212 AGAGAAGAGCTTACTAGAAAGAAGAG 57.719 38.462 0.00 0.00 0.00 2.85
2434 3356 8.107095 AGAGAAGAGCTTACTAGAAAGAAGAGA 58.893 37.037 0.00 0.00 0.00 3.10
2435 3357 8.281212 AGAAGAGCTTACTAGAAAGAAGAGAG 57.719 38.462 0.00 0.00 0.00 3.20
2436 3358 6.451064 AGAGCTTACTAGAAAGAAGAGAGC 57.549 41.667 0.00 0.00 0.00 4.09
2437 3359 6.187682 AGAGCTTACTAGAAAGAAGAGAGCT 58.812 40.000 0.00 0.00 37.96 4.09
2438 3360 6.663523 AGAGCTTACTAGAAAGAAGAGAGCTT 59.336 38.462 0.00 0.00 36.57 3.74
2439 3361 7.832187 AGAGCTTACTAGAAAGAAGAGAGCTTA 59.168 37.037 0.00 0.00 36.57 3.09
2440 3362 8.356000 AGCTTACTAGAAAGAAGAGAGCTTAA 57.644 34.615 0.00 0.00 34.50 1.85
2441 3363 8.248253 AGCTTACTAGAAAGAAGAGAGCTTAAC 58.752 37.037 0.00 0.00 34.50 2.01
2442 3364 8.030106 GCTTACTAGAAAGAAGAGAGCTTAACA 58.970 37.037 0.00 0.00 33.61 2.41
2443 3365 9.915629 CTTACTAGAAAGAAGAGAGCTTAACAA 57.084 33.333 0.00 0.00 33.61 2.83
2445 3367 8.996024 ACTAGAAAGAAGAGAGCTTAACAATC 57.004 34.615 0.00 0.00 33.61 2.67
2446 3368 8.038351 ACTAGAAAGAAGAGAGCTTAACAATCC 58.962 37.037 0.00 0.00 33.61 3.01
2447 3369 6.773638 AGAAAGAAGAGAGCTTAACAATCCA 58.226 36.000 0.00 0.00 33.61 3.41
2448 3370 7.401246 AGAAAGAAGAGAGCTTAACAATCCAT 58.599 34.615 0.00 0.00 33.61 3.41
2449 3371 7.552330 AGAAAGAAGAGAGCTTAACAATCCATC 59.448 37.037 0.00 0.00 33.61 3.51
2450 3372 6.305272 AGAAGAGAGCTTAACAATCCATCA 57.695 37.500 0.00 0.00 33.61 3.07
2451 3373 6.897986 AGAAGAGAGCTTAACAATCCATCAT 58.102 36.000 0.00 0.00 33.61 2.45
2452 3374 8.027524 AGAAGAGAGCTTAACAATCCATCATA 57.972 34.615 0.00 0.00 33.61 2.15
2453 3375 8.149647 AGAAGAGAGCTTAACAATCCATCATAG 58.850 37.037 0.00 0.00 33.61 2.23
2454 3376 6.229733 AGAGAGCTTAACAATCCATCATAGC 58.770 40.000 0.00 0.00 0.00 2.97
2455 3377 6.043012 AGAGAGCTTAACAATCCATCATAGCT 59.957 38.462 0.00 0.00 40.16 3.32
2456 3378 7.234371 AGAGAGCTTAACAATCCATCATAGCTA 59.766 37.037 0.00 0.00 37.81 3.32
2457 3379 7.385267 AGAGCTTAACAATCCATCATAGCTAG 58.615 38.462 0.00 0.00 37.81 3.42
2458 3380 6.471146 AGCTTAACAATCCATCATAGCTAGG 58.529 40.000 0.00 0.00 36.08 3.02
2459 3381 5.645497 GCTTAACAATCCATCATAGCTAGGG 59.355 44.000 5.42 1.57 0.00 3.53
2460 3382 6.520742 GCTTAACAATCCATCATAGCTAGGGA 60.521 42.308 5.42 7.08 0.00 4.20
2461 3383 7.574021 TTAACAATCCATCATAGCTAGGGAT 57.426 36.000 5.42 9.02 39.97 3.85
2462 3384 8.679344 TTAACAATCCATCATAGCTAGGGATA 57.321 34.615 15.37 2.66 37.37 2.59
2463 3385 7.574021 AACAATCCATCATAGCTAGGGATAA 57.426 36.000 15.37 7.00 37.37 1.75
2464 3386 7.761981 ACAATCCATCATAGCTAGGGATAAT 57.238 36.000 15.37 8.46 37.37 1.28
2465 3387 7.800092 ACAATCCATCATAGCTAGGGATAATC 58.200 38.462 15.37 0.00 37.37 1.75
2466 3388 7.404104 ACAATCCATCATAGCTAGGGATAATCA 59.596 37.037 15.37 0.00 37.37 2.57
2467 3389 7.615039 ATCCATCATAGCTAGGGATAATCAG 57.385 40.000 14.10 2.89 36.62 2.90
2468 3390 6.745857 TCCATCATAGCTAGGGATAATCAGA 58.254 40.000 5.42 0.00 0.00 3.27
2469 3391 7.191918 TCCATCATAGCTAGGGATAATCAGAA 58.808 38.462 5.42 0.00 0.00 3.02
2470 3392 7.848361 TCCATCATAGCTAGGGATAATCAGAAT 59.152 37.037 5.42 0.00 0.00 2.40
2471 3393 8.492782 CCATCATAGCTAGGGATAATCAGAATT 58.507 37.037 5.42 0.00 0.00 2.17
2472 3394 9.327628 CATCATAGCTAGGGATAATCAGAATTG 57.672 37.037 5.42 0.00 0.00 2.32
2473 3395 8.441311 TCATAGCTAGGGATAATCAGAATTGT 57.559 34.615 5.42 0.00 0.00 2.71
2474 3396 8.316946 TCATAGCTAGGGATAATCAGAATTGTG 58.683 37.037 5.42 0.00 0.00 3.33
2475 3397 5.874093 AGCTAGGGATAATCAGAATTGTGG 58.126 41.667 2.33 0.00 0.00 4.17
2476 3398 5.608437 AGCTAGGGATAATCAGAATTGTGGA 59.392 40.000 2.33 0.00 0.00 4.02
2477 3399 5.936956 GCTAGGGATAATCAGAATTGTGGAG 59.063 44.000 2.33 0.00 0.00 3.86
2478 3400 5.316158 AGGGATAATCAGAATTGTGGAGG 57.684 43.478 2.33 0.00 0.00 4.30
2479 3401 4.105377 AGGGATAATCAGAATTGTGGAGGG 59.895 45.833 2.33 0.00 0.00 4.30
2480 3402 4.141158 GGGATAATCAGAATTGTGGAGGGT 60.141 45.833 2.33 0.00 0.00 4.34
2481 3403 5.449553 GGATAATCAGAATTGTGGAGGGTT 58.550 41.667 2.33 0.00 0.00 4.11
2482 3404 5.893824 GGATAATCAGAATTGTGGAGGGTTT 59.106 40.000 2.33 0.00 0.00 3.27
2483 3405 6.381133 GGATAATCAGAATTGTGGAGGGTTTT 59.619 38.462 2.33 0.00 0.00 2.43
2484 3406 7.093333 GGATAATCAGAATTGTGGAGGGTTTTT 60.093 37.037 2.33 0.00 0.00 1.94
2485 3407 5.728637 ATCAGAATTGTGGAGGGTTTTTC 57.271 39.130 2.33 0.00 0.00 2.29
2486 3408 3.568007 TCAGAATTGTGGAGGGTTTTTCG 59.432 43.478 2.33 0.00 0.00 3.46
2487 3409 2.296190 AGAATTGTGGAGGGTTTTTCGC 59.704 45.455 0.00 0.00 0.00 4.70
2488 3410 0.966179 ATTGTGGAGGGTTTTTCGCC 59.034 50.000 0.00 0.00 0.00 5.54
2489 3411 1.110518 TTGTGGAGGGTTTTTCGCCC 61.111 55.000 0.00 0.00 46.43 6.13
2497 3419 3.513680 GGGTTTTTCGCCCGAATTATT 57.486 42.857 3.77 0.00 36.30 1.40
2498 3420 3.441163 GGGTTTTTCGCCCGAATTATTC 58.559 45.455 3.77 0.00 36.30 1.75
2499 3421 3.119424 GGGTTTTTCGCCCGAATTATTCA 60.119 43.478 3.77 0.00 36.30 2.57
2500 3422 4.487019 GGTTTTTCGCCCGAATTATTCAA 58.513 39.130 3.77 0.00 33.79 2.69
2501 3423 4.924462 GGTTTTTCGCCCGAATTATTCAAA 59.076 37.500 3.77 0.00 33.79 2.69
2502 3424 5.164031 GGTTTTTCGCCCGAATTATTCAAAC 60.164 40.000 13.47 13.47 33.79 2.93
2503 3425 5.379732 TTTTCGCCCGAATTATTCAAACT 57.620 34.783 3.77 0.00 33.79 2.66
2504 3426 6.497785 TTTTCGCCCGAATTATTCAAACTA 57.502 33.333 3.77 0.00 33.79 2.24
2505 3427 6.687081 TTTCGCCCGAATTATTCAAACTAT 57.313 33.333 3.77 0.00 33.79 2.12
2506 3428 7.789273 TTTCGCCCGAATTATTCAAACTATA 57.211 32.000 3.77 0.00 33.79 1.31
2507 3429 7.416154 TTCGCCCGAATTATTCAAACTATAG 57.584 36.000 5.76 0.00 0.00 1.31
2508 3430 6.518493 TCGCCCGAATTATTCAAACTATAGT 58.482 36.000 0.00 0.00 0.00 2.12
2509 3431 6.422701 TCGCCCGAATTATTCAAACTATAGTG 59.577 38.462 6.06 0.00 0.00 2.74
2510 3432 6.422701 CGCCCGAATTATTCAAACTATAGTGA 59.577 38.462 6.06 0.00 0.00 3.41
2511 3433 7.117812 CGCCCGAATTATTCAAACTATAGTGAT 59.882 37.037 6.06 1.86 0.00 3.06
2512 3434 9.431887 GCCCGAATTATTCAAACTATAGTGATA 57.568 33.333 6.06 0.95 0.00 2.15
2521 3443 7.843490 TCAAACTATAGTGATAAACAGGCAC 57.157 36.000 6.06 0.00 0.00 5.01
2522 3444 7.620880 TCAAACTATAGTGATAAACAGGCACT 58.379 34.615 6.06 0.00 44.38 4.40
2523 3445 7.764443 TCAAACTATAGTGATAAACAGGCACTC 59.236 37.037 6.06 0.00 41.58 3.51
2524 3446 6.791867 ACTATAGTGATAAACAGGCACTCA 57.208 37.500 4.10 0.00 41.58 3.41
2525 3447 6.574350 ACTATAGTGATAAACAGGCACTCAC 58.426 40.000 4.10 0.00 41.58 3.51
2526 3448 5.683876 ATAGTGATAAACAGGCACTCACT 57.316 39.130 8.39 8.39 46.08 3.41
2527 3449 3.931578 AGTGATAAACAGGCACTCACTC 58.068 45.455 0.00 0.00 41.99 3.51
2528 3450 3.324846 AGTGATAAACAGGCACTCACTCA 59.675 43.478 0.00 0.00 41.99 3.41
2529 3451 3.433615 GTGATAAACAGGCACTCACTCAC 59.566 47.826 0.00 0.00 34.60 3.51
2530 3452 3.324846 TGATAAACAGGCACTCACTCACT 59.675 43.478 0.00 0.00 34.60 3.41
2531 3453 2.246719 AAACAGGCACTCACTCACTC 57.753 50.000 0.00 0.00 34.60 3.51
2532 3454 1.123077 AACAGGCACTCACTCACTCA 58.877 50.000 0.00 0.00 34.60 3.41
2533 3455 0.390860 ACAGGCACTCACTCACTCAC 59.609 55.000 0.00 0.00 34.60 3.51
2534 3456 0.665670 CAGGCACTCACTCACTCACG 60.666 60.000 0.00 0.00 34.60 4.35
2535 3457 2.024319 GGCACTCACTCACTCACGC 61.024 63.158 0.00 0.00 0.00 5.34
2536 3458 2.024319 GCACTCACTCACTCACGCC 61.024 63.158 0.00 0.00 0.00 5.68
2537 3459 1.363807 CACTCACTCACTCACGCCA 59.636 57.895 0.00 0.00 0.00 5.69
2538 3460 0.037882 CACTCACTCACTCACGCCAT 60.038 55.000 0.00 0.00 0.00 4.40
2539 3461 0.244994 ACTCACTCACTCACGCCATC 59.755 55.000 0.00 0.00 0.00 3.51
2540 3462 0.244721 CTCACTCACTCACGCCATCA 59.755 55.000 0.00 0.00 0.00 3.07
2541 3463 0.678950 TCACTCACTCACGCCATCAA 59.321 50.000 0.00 0.00 0.00 2.57
2542 3464 1.073964 CACTCACTCACGCCATCAAG 58.926 55.000 0.00 0.00 0.00 3.02
2543 3465 0.036952 ACTCACTCACGCCATCAAGG 60.037 55.000 0.00 0.00 41.84 3.61
2544 3466 0.742281 CTCACTCACGCCATCAAGGG 60.742 60.000 0.00 0.00 38.09 3.95
2545 3467 1.003355 CACTCACGCCATCAAGGGT 60.003 57.895 0.00 0.00 38.09 4.34
2546 3468 0.606401 CACTCACGCCATCAAGGGTT 60.606 55.000 0.00 0.00 38.09 4.11
2547 3469 0.110486 ACTCACGCCATCAAGGGTTT 59.890 50.000 0.00 0.00 38.09 3.27
2548 3470 1.247567 CTCACGCCATCAAGGGTTTT 58.752 50.000 0.00 0.00 38.09 2.43
2549 3471 1.613437 CTCACGCCATCAAGGGTTTTT 59.387 47.619 0.00 0.00 38.09 1.94
2550 3472 1.611491 TCACGCCATCAAGGGTTTTTC 59.389 47.619 0.00 0.00 38.09 2.29
2551 3473 0.596082 ACGCCATCAAGGGTTTTTCG 59.404 50.000 0.00 0.00 38.09 3.46
2552 3474 0.732538 CGCCATCAAGGGTTTTTCGC 60.733 55.000 0.00 0.00 38.09 4.70
2553 3475 0.316841 GCCATCAAGGGTTTTTCGCA 59.683 50.000 0.00 0.00 38.09 5.10
2554 3476 1.066929 GCCATCAAGGGTTTTTCGCAT 60.067 47.619 0.00 0.00 38.09 4.73
2555 3477 2.609350 CCATCAAGGGTTTTTCGCATG 58.391 47.619 0.00 0.00 0.00 4.06
2556 3478 2.230992 CCATCAAGGGTTTTTCGCATGA 59.769 45.455 0.00 0.00 40.02 3.07
2557 3479 3.305950 CCATCAAGGGTTTTTCGCATGAA 60.306 43.478 0.00 0.00 39.40 2.57
2558 3480 4.497300 CATCAAGGGTTTTTCGCATGAAT 58.503 39.130 0.00 0.00 39.40 2.57
2559 3481 4.599047 TCAAGGGTTTTTCGCATGAATT 57.401 36.364 0.00 0.00 34.68 2.17
2560 3482 5.713792 TCAAGGGTTTTTCGCATGAATTA 57.286 34.783 0.00 0.00 34.68 1.40
2561 3483 6.279513 TCAAGGGTTTTTCGCATGAATTAT 57.720 33.333 0.00 0.00 34.68 1.28
2562 3484 6.696411 TCAAGGGTTTTTCGCATGAATTATT 58.304 32.000 0.00 0.00 34.68 1.40
2563 3485 6.811170 TCAAGGGTTTTTCGCATGAATTATTC 59.189 34.615 0.00 0.00 34.68 1.75
2564 3486 6.279513 AGGGTTTTTCGCATGAATTATTCA 57.720 33.333 10.23 10.23 45.01 2.57
2565 3487 6.696411 AGGGTTTTTCGCATGAATTATTCAA 58.304 32.000 11.88 0.00 43.95 2.69
2566 3488 7.158021 AGGGTTTTTCGCATGAATTATTCAAA 58.842 30.769 11.88 0.00 43.95 2.69
2567 3489 7.117667 AGGGTTTTTCGCATGAATTATTCAAAC 59.882 33.333 11.88 9.27 43.95 2.93
2568 3490 6.947680 GGTTTTTCGCATGAATTATTCAAACG 59.052 34.615 19.82 19.82 43.95 3.60
2569 3491 7.148885 GGTTTTTCGCATGAATTATTCAAACGA 60.149 33.333 22.63 22.63 44.12 3.85
2573 3495 8.459521 TTCGCATGAATTATTCAAACGAATTT 57.540 26.923 28.12 6.11 46.52 1.82
2574 3496 7.883655 TCGCATGAATTATTCAAACGAATTTG 58.116 30.769 23.57 12.44 43.41 2.32
2613 3535 9.847224 AACAATTCTAAATTATACTCCATCCGT 57.153 29.630 0.00 0.00 0.00 4.69
2614 3536 9.490379 ACAATTCTAAATTATACTCCATCCGTC 57.510 33.333 0.00 0.00 0.00 4.79
2615 3537 8.936864 CAATTCTAAATTATACTCCATCCGTCC 58.063 37.037 0.00 0.00 0.00 4.79
2616 3538 6.600882 TCTAAATTATACTCCATCCGTCCC 57.399 41.667 0.00 0.00 0.00 4.46
2617 3539 6.079336 TCTAAATTATACTCCATCCGTCCCA 58.921 40.000 0.00 0.00 0.00 4.37
2618 3540 5.843019 AAATTATACTCCATCCGTCCCAT 57.157 39.130 0.00 0.00 0.00 4.00
2619 3541 6.945636 AAATTATACTCCATCCGTCCCATA 57.054 37.500 0.00 0.00 0.00 2.74
2620 3542 6.945636 AATTATACTCCATCCGTCCCATAA 57.054 37.500 0.00 0.00 0.00 1.90
2621 3543 7.510675 AATTATACTCCATCCGTCCCATAAT 57.489 36.000 0.00 0.00 0.00 1.28
2622 3544 8.618240 AATTATACTCCATCCGTCCCATAATA 57.382 34.615 0.00 0.00 0.00 0.98
2623 3545 8.798975 ATTATACTCCATCCGTCCCATAATAT 57.201 34.615 0.00 0.00 0.00 1.28
2624 3546 9.892444 ATTATACTCCATCCGTCCCATAATATA 57.108 33.333 0.00 0.00 0.00 0.86
2625 3547 9.717994 TTATACTCCATCCGTCCCATAATATAA 57.282 33.333 0.00 0.00 0.00 0.98
2626 3548 6.546428 ACTCCATCCGTCCCATAATATAAG 57.454 41.667 0.00 0.00 0.00 1.73
2627 3549 6.261435 ACTCCATCCGTCCCATAATATAAGA 58.739 40.000 0.00 0.00 0.00 2.10
2628 3550 6.381420 ACTCCATCCGTCCCATAATATAAGAG 59.619 42.308 0.00 0.00 0.00 2.85
2629 3551 6.261435 TCCATCCGTCCCATAATATAAGAGT 58.739 40.000 0.00 0.00 0.00 3.24
2630 3552 6.154534 TCCATCCGTCCCATAATATAAGAGTG 59.845 42.308 0.00 0.00 0.00 3.51
2631 3553 6.070767 CCATCCGTCCCATAATATAAGAGTGT 60.071 42.308 0.00 0.00 0.00 3.55
2632 3554 6.989155 TCCGTCCCATAATATAAGAGTGTT 57.011 37.500 0.00 0.00 0.00 3.32
2633 3555 7.369551 TCCGTCCCATAATATAAGAGTGTTT 57.630 36.000 0.00 0.00 0.00 2.83
2634 3556 7.439381 TCCGTCCCATAATATAAGAGTGTTTC 58.561 38.462 0.00 0.00 0.00 2.78
2635 3557 7.289317 TCCGTCCCATAATATAAGAGTGTTTCT 59.711 37.037 0.00 0.00 37.93 2.52
2637 3559 9.326413 CGTCCCATAATATAAGAGTGTTTCTTT 57.674 33.333 0.00 0.00 43.68 2.52
2648 3570 6.632171 AGAGTGTTTCTTTTTCTTTTTGCG 57.368 33.333 0.00 0.00 29.61 4.85
2649 3571 5.576774 AGAGTGTTTCTTTTTCTTTTTGCGG 59.423 36.000 0.00 0.00 29.61 5.69
2650 3572 4.629634 AGTGTTTCTTTTTCTTTTTGCGGG 59.370 37.500 0.00 0.00 0.00 6.13
2651 3573 4.627900 GTGTTTCTTTTTCTTTTTGCGGGA 59.372 37.500 0.00 0.00 0.00 5.14
2652 3574 5.120986 GTGTTTCTTTTTCTTTTTGCGGGAA 59.879 36.000 0.00 0.00 0.00 3.97
2653 3575 5.877564 TGTTTCTTTTTCTTTTTGCGGGAAT 59.122 32.000 0.00 0.00 0.00 3.01
2654 3576 7.010645 GTGTTTCTTTTTCTTTTTGCGGGAATA 59.989 33.333 0.00 0.00 0.00 1.75
2655 3577 7.713073 TGTTTCTTTTTCTTTTTGCGGGAATAT 59.287 29.630 0.00 0.00 0.00 1.28
2656 3578 9.198837 GTTTCTTTTTCTTTTTGCGGGAATATA 57.801 29.630 0.00 0.00 0.00 0.86
2657 3579 9.765795 TTTCTTTTTCTTTTTGCGGGAATATAA 57.234 25.926 0.00 0.00 0.00 0.98
2658 3580 8.980143 TCTTTTTCTTTTTGCGGGAATATAAG 57.020 30.769 0.00 0.00 0.00 1.73
2659 3581 8.798402 TCTTTTTCTTTTTGCGGGAATATAAGA 58.202 29.630 0.00 0.00 0.00 2.10
2660 3582 8.980143 TTTTTCTTTTTGCGGGAATATAAGAG 57.020 30.769 0.00 0.00 0.00 2.85
2661 3583 7.696992 TTTCTTTTTGCGGGAATATAAGAGT 57.303 32.000 0.00 0.00 0.00 3.24
2662 3584 6.677781 TCTTTTTGCGGGAATATAAGAGTG 57.322 37.500 0.00 0.00 0.00 3.51
2663 3585 6.177610 TCTTTTTGCGGGAATATAAGAGTGT 58.822 36.000 0.00 0.00 0.00 3.55
2664 3586 6.657541 TCTTTTTGCGGGAATATAAGAGTGTT 59.342 34.615 0.00 0.00 0.00 3.32
2665 3587 6.827586 TTTTGCGGGAATATAAGAGTGTTT 57.172 33.333 0.00 0.00 0.00 2.83
2666 3588 6.431198 TTTGCGGGAATATAAGAGTGTTTC 57.569 37.500 0.00 0.00 0.00 2.78
2667 3589 5.353394 TGCGGGAATATAAGAGTGTTTCT 57.647 39.130 0.00 0.00 37.93 2.52
2668 3590 5.116180 TGCGGGAATATAAGAGTGTTTCTG 58.884 41.667 0.00 0.00 35.91 3.02
2669 3591 5.105106 TGCGGGAATATAAGAGTGTTTCTGA 60.105 40.000 0.00 0.00 35.91 3.27
2670 3592 5.992217 GCGGGAATATAAGAGTGTTTCTGAT 59.008 40.000 0.00 0.00 35.91 2.90
2671 3593 7.152645 GCGGGAATATAAGAGTGTTTCTGATA 58.847 38.462 0.00 0.00 34.38 2.15
2672 3594 7.819900 GCGGGAATATAAGAGTGTTTCTGATAT 59.180 37.037 0.00 0.00 40.40 1.63
2681 3603 7.726033 AGAGTGTTTCTGATATAGTCAACCT 57.274 36.000 3.40 0.00 36.14 3.50
2682 3604 8.824756 AGAGTGTTTCTGATATAGTCAACCTA 57.175 34.615 3.40 0.00 36.14 3.08
2683 3605 9.427821 AGAGTGTTTCTGATATAGTCAACCTAT 57.572 33.333 3.40 0.00 36.14 2.57
2689 3611 9.961265 TTTCTGATATAGTCAACCTATACAACG 57.039 33.333 0.00 0.00 40.57 4.10
2690 3612 8.913487 TCTGATATAGTCAACCTATACAACGA 57.087 34.615 0.00 0.00 40.57 3.85
2691 3613 9.516546 TCTGATATAGTCAACCTATACAACGAT 57.483 33.333 0.00 0.00 40.57 3.73
2692 3614 9.561270 CTGATATAGTCAACCTATACAACGATG 57.439 37.037 0.00 0.00 40.57 3.84
2693 3615 9.074576 TGATATAGTCAACCTATACAACGATGT 57.925 33.333 3.12 3.12 40.57 3.06
2694 3616 9.909644 GATATAGTCAACCTATACAACGATGTT 57.090 33.333 2.83 0.00 40.57 2.71
2696 3618 6.721571 AGTCAACCTATACAACGATGTTTG 57.278 37.500 2.83 2.27 41.05 2.93
2697 3619 6.228258 AGTCAACCTATACAACGATGTTTGT 58.772 36.000 2.83 0.00 42.46 2.83
2698 3620 6.708949 AGTCAACCTATACAACGATGTTTGTT 59.291 34.615 2.83 0.40 40.29 2.83
2699 3621 7.227910 AGTCAACCTATACAACGATGTTTGTTT 59.772 33.333 2.83 0.00 40.29 2.83
2700 3622 7.858879 GTCAACCTATACAACGATGTTTGTTTT 59.141 33.333 2.83 0.00 40.29 2.43
2701 3623 7.858382 TCAACCTATACAACGATGTTTGTTTTG 59.142 33.333 2.83 3.62 40.29 2.44
2702 3624 6.674066 ACCTATACAACGATGTTTGTTTTGG 58.326 36.000 2.83 5.05 40.29 3.28
2703 3625 6.090129 CCTATACAACGATGTTTGTTTTGGG 58.910 40.000 2.83 0.00 40.29 4.12
2704 3626 3.172229 ACAACGATGTTTGTTTTGGGG 57.828 42.857 0.00 0.00 36.22 4.96
2705 3627 2.159028 ACAACGATGTTTGTTTTGGGGG 60.159 45.455 0.00 0.00 36.22 5.40
2706 3628 2.074729 ACGATGTTTGTTTTGGGGGA 57.925 45.000 0.00 0.00 0.00 4.81
2707 3629 1.960689 ACGATGTTTGTTTTGGGGGAG 59.039 47.619 0.00 0.00 0.00 4.30
2708 3630 1.960689 CGATGTTTGTTTTGGGGGAGT 59.039 47.619 0.00 0.00 0.00 3.85
2709 3631 2.364002 CGATGTTTGTTTTGGGGGAGTT 59.636 45.455 0.00 0.00 0.00 3.01
2710 3632 3.727726 GATGTTTGTTTTGGGGGAGTTG 58.272 45.455 0.00 0.00 0.00 3.16
2711 3633 1.834263 TGTTTGTTTTGGGGGAGTTGG 59.166 47.619 0.00 0.00 0.00 3.77
2712 3634 2.112190 GTTTGTTTTGGGGGAGTTGGA 58.888 47.619 0.00 0.00 0.00 3.53
2713 3635 2.080654 TTGTTTTGGGGGAGTTGGAG 57.919 50.000 0.00 0.00 0.00 3.86
2714 3636 0.187361 TGTTTTGGGGGAGTTGGAGG 59.813 55.000 0.00 0.00 0.00 4.30
2715 3637 0.187606 GTTTTGGGGGAGTTGGAGGT 59.812 55.000 0.00 0.00 0.00 3.85
2716 3638 1.426215 GTTTTGGGGGAGTTGGAGGTA 59.574 52.381 0.00 0.00 0.00 3.08
2717 3639 1.368374 TTTGGGGGAGTTGGAGGTAG 58.632 55.000 0.00 0.00 0.00 3.18
2718 3640 0.195096 TTGGGGGAGTTGGAGGTAGT 59.805 55.000 0.00 0.00 0.00 2.73
2719 3641 0.546747 TGGGGGAGTTGGAGGTAGTG 60.547 60.000 0.00 0.00 0.00 2.74
2720 3642 0.546988 GGGGGAGTTGGAGGTAGTGT 60.547 60.000 0.00 0.00 0.00 3.55
2721 3643 0.613777 GGGGAGTTGGAGGTAGTGTG 59.386 60.000 0.00 0.00 0.00 3.82
2722 3644 0.613777 GGGAGTTGGAGGTAGTGTGG 59.386 60.000 0.00 0.00 0.00 4.17
2723 3645 1.349067 GGAGTTGGAGGTAGTGTGGT 58.651 55.000 0.00 0.00 0.00 4.16
2724 3646 1.002087 GGAGTTGGAGGTAGTGTGGTG 59.998 57.143 0.00 0.00 0.00 4.17
2725 3647 1.002087 GAGTTGGAGGTAGTGTGGTGG 59.998 57.143 0.00 0.00 0.00 4.61
2726 3648 0.036306 GTTGGAGGTAGTGTGGTGGG 59.964 60.000 0.00 0.00 0.00 4.61
2727 3649 0.104882 TTGGAGGTAGTGTGGTGGGA 60.105 55.000 0.00 0.00 0.00 4.37
2728 3650 0.118346 TGGAGGTAGTGTGGTGGGAT 59.882 55.000 0.00 0.00 0.00 3.85
2729 3651 0.541863 GGAGGTAGTGTGGTGGGATG 59.458 60.000 0.00 0.00 0.00 3.51
2730 3652 0.541863 GAGGTAGTGTGGTGGGATGG 59.458 60.000 0.00 0.00 0.00 3.51
2731 3653 1.077716 GGTAGTGTGGTGGGATGGC 60.078 63.158 0.00 0.00 0.00 4.40
2732 3654 1.077716 GTAGTGTGGTGGGATGGCC 60.078 63.158 0.00 0.00 0.00 5.36
2741 3663 3.965660 GGGATGGCCCGTAGAAGA 58.034 61.111 0.00 0.00 46.48 2.87
2742 3664 1.446366 GGGATGGCCCGTAGAAGAC 59.554 63.158 0.00 0.00 46.48 3.01
2743 3665 1.049289 GGGATGGCCCGTAGAAGACT 61.049 60.000 0.00 0.00 46.48 3.24
2744 3666 1.700955 GGATGGCCCGTAGAAGACTA 58.299 55.000 0.00 0.00 0.00 2.59
2745 3667 2.249139 GGATGGCCCGTAGAAGACTAT 58.751 52.381 0.00 0.00 0.00 2.12
2746 3668 3.428532 GGATGGCCCGTAGAAGACTATA 58.571 50.000 0.00 0.00 0.00 1.31
2747 3669 4.024670 GGATGGCCCGTAGAAGACTATAT 58.975 47.826 0.00 0.00 0.00 0.86
2748 3670 4.142138 GGATGGCCCGTAGAAGACTATATG 60.142 50.000 0.00 0.00 0.00 1.78
2749 3671 4.108501 TGGCCCGTAGAAGACTATATGA 57.891 45.455 0.00 0.00 0.00 2.15
2750 3672 4.673968 TGGCCCGTAGAAGACTATATGAT 58.326 43.478 0.00 0.00 0.00 2.45
2751 3673 4.462834 TGGCCCGTAGAAGACTATATGATG 59.537 45.833 0.00 0.00 0.00 3.07
2752 3674 4.425520 GCCCGTAGAAGACTATATGATGC 58.574 47.826 0.00 0.00 0.00 3.91
2753 3675 4.082190 GCCCGTAGAAGACTATATGATGCA 60.082 45.833 0.00 0.00 0.00 3.96
2754 3676 5.566826 GCCCGTAGAAGACTATATGATGCAA 60.567 44.000 0.00 0.00 0.00 4.08
2755 3677 6.634805 CCCGTAGAAGACTATATGATGCAAT 58.365 40.000 0.00 0.00 0.00 3.56
2756 3678 7.099764 CCCGTAGAAGACTATATGATGCAATT 58.900 38.462 0.00 0.00 0.00 2.32
2757 3679 7.276658 CCCGTAGAAGACTATATGATGCAATTC 59.723 40.741 0.00 0.00 0.00 2.17
2758 3680 7.814587 CCGTAGAAGACTATATGATGCAATTCA 59.185 37.037 0.00 0.00 0.00 2.57
2759 3681 9.196552 CGTAGAAGACTATATGATGCAATTCAA 57.803 33.333 0.00 0.00 0.00 2.69
2771 3693 7.917720 TGATGCAATTCAATTGTATTCATCG 57.082 32.000 24.41 12.66 43.99 3.84
2772 3694 6.919115 TGATGCAATTCAATTGTATTCATCGG 59.081 34.615 24.41 12.43 43.99 4.18
2773 3695 6.448207 TGCAATTCAATTGTATTCATCGGA 57.552 33.333 11.80 0.00 42.20 4.55
2774 3696 6.497437 TGCAATTCAATTGTATTCATCGGAG 58.503 36.000 11.80 0.00 42.20 4.63
2775 3697 6.095300 TGCAATTCAATTGTATTCATCGGAGT 59.905 34.615 11.80 0.00 42.20 3.85
2776 3698 6.634436 GCAATTCAATTGTATTCATCGGAGTC 59.366 38.462 11.80 0.00 42.20 3.36
2777 3699 7.467811 GCAATTCAATTGTATTCATCGGAGTCT 60.468 37.037 11.80 0.00 42.20 3.24
2778 3700 6.908870 TTCAATTGTATTCATCGGAGTCTG 57.091 37.500 5.13 0.00 0.00 3.51
2779 3701 5.977635 TCAATTGTATTCATCGGAGTCTGT 58.022 37.500 5.13 0.00 0.00 3.41
2780 3702 6.406370 TCAATTGTATTCATCGGAGTCTGTT 58.594 36.000 5.13 0.00 0.00 3.16
2781 3703 7.552459 TCAATTGTATTCATCGGAGTCTGTTA 58.448 34.615 5.13 0.00 0.00 2.41
2782 3704 8.204160 TCAATTGTATTCATCGGAGTCTGTTAT 58.796 33.333 5.13 0.00 0.00 1.89
2783 3705 9.476202 CAATTGTATTCATCGGAGTCTGTTATA 57.524 33.333 0.00 0.00 0.00 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.442952 TGAATAGTGTGTTAATGTTTGGCAC 58.557 36.000 0.00 0.00 0.00 5.01
1 2 6.641169 TGAATAGTGTGTTAATGTTTGGCA 57.359 33.333 0.00 0.00 0.00 4.92
2 3 7.411804 GCATTGAATAGTGTGTTAATGTTTGGC 60.412 37.037 0.00 0.00 0.00 4.52
3 4 7.814107 AGCATTGAATAGTGTGTTAATGTTTGG 59.186 33.333 0.00 0.00 0.00 3.28
4 5 8.641155 CAGCATTGAATAGTGTGTTAATGTTTG 58.359 33.333 0.00 0.00 0.00 2.93
5 6 8.575589 TCAGCATTGAATAGTGTGTTAATGTTT 58.424 29.630 0.00 0.00 0.00 2.83
6 7 8.109705 TCAGCATTGAATAGTGTGTTAATGTT 57.890 30.769 0.00 0.00 0.00 2.71
7 8 7.686438 TCAGCATTGAATAGTGTGTTAATGT 57.314 32.000 0.00 0.00 0.00 2.71
43 44 8.942338 ACACATTACGAGATATGAGCTAAAAA 57.058 30.769 0.00 0.00 0.00 1.94
44 45 8.942338 AACACATTACGAGATATGAGCTAAAA 57.058 30.769 0.00 0.00 0.00 1.52
45 46 8.942338 AAACACATTACGAGATATGAGCTAAA 57.058 30.769 0.00 0.00 0.00 1.85
46 47 8.942338 AAAACACATTACGAGATATGAGCTAA 57.058 30.769 0.00 0.00 0.00 3.09
47 48 8.194769 TGAAAACACATTACGAGATATGAGCTA 58.805 33.333 0.00 0.00 0.00 3.32
48 49 7.041721 TGAAAACACATTACGAGATATGAGCT 58.958 34.615 0.00 0.00 0.00 4.09
49 50 7.234187 TGAAAACACATTACGAGATATGAGC 57.766 36.000 0.00 0.00 0.00 4.26
68 69 6.016192 TGGCCACACGAATTATAAGTTGAAAA 60.016 34.615 0.00 0.00 0.00 2.29
69 70 5.473846 TGGCCACACGAATTATAAGTTGAAA 59.526 36.000 0.00 0.00 0.00 2.69
70 71 5.004448 TGGCCACACGAATTATAAGTTGAA 58.996 37.500 0.00 0.00 0.00 2.69
71 72 4.580868 TGGCCACACGAATTATAAGTTGA 58.419 39.130 0.00 0.00 0.00 3.18
72 73 4.955925 TGGCCACACGAATTATAAGTTG 57.044 40.909 0.00 0.00 0.00 3.16
73 74 7.633193 TTTATGGCCACACGAATTATAAGTT 57.367 32.000 8.16 0.00 0.00 2.66
74 75 6.238648 GCTTTATGGCCACACGAATTATAAGT 60.239 38.462 8.16 0.00 0.00 2.24
75 76 6.142817 GCTTTATGGCCACACGAATTATAAG 58.857 40.000 8.16 0.00 0.00 1.73
76 77 5.590663 TGCTTTATGGCCACACGAATTATAA 59.409 36.000 8.16 0.00 0.00 0.98
77 78 5.126779 TGCTTTATGGCCACACGAATTATA 58.873 37.500 8.16 0.00 0.00 0.98
78 79 3.951037 TGCTTTATGGCCACACGAATTAT 59.049 39.130 8.16 0.00 0.00 1.28
79 80 3.348119 TGCTTTATGGCCACACGAATTA 58.652 40.909 8.16 0.00 0.00 1.40
80 81 2.166829 TGCTTTATGGCCACACGAATT 58.833 42.857 8.16 0.00 0.00 2.17
81 82 1.832883 TGCTTTATGGCCACACGAAT 58.167 45.000 8.16 0.00 0.00 3.34
82 83 1.742831 GATGCTTTATGGCCACACGAA 59.257 47.619 8.16 0.00 0.00 3.85
83 84 1.339535 TGATGCTTTATGGCCACACGA 60.340 47.619 8.16 0.00 0.00 4.35
84 85 1.093972 TGATGCTTTATGGCCACACG 58.906 50.000 8.16 0.00 0.00 4.49
85 86 2.094675 AGTGATGCTTTATGGCCACAC 58.905 47.619 8.16 9.42 37.44 3.82
86 87 2.025981 AGAGTGATGCTTTATGGCCACA 60.026 45.455 8.16 0.00 30.56 4.17
87 88 2.615912 GAGAGTGATGCTTTATGGCCAC 59.384 50.000 8.16 0.00 0.00 5.01
88 89 2.507058 AGAGAGTGATGCTTTATGGCCA 59.493 45.455 8.56 8.56 0.00 5.36
89 90 3.205784 AGAGAGTGATGCTTTATGGCC 57.794 47.619 0.00 0.00 0.00 5.36
90 91 5.586243 TGTTAAGAGAGTGATGCTTTATGGC 59.414 40.000 0.00 0.00 0.00 4.40
91 92 7.714377 AGATGTTAAGAGAGTGATGCTTTATGG 59.286 37.037 0.00 0.00 0.00 2.74
92 93 8.659925 AGATGTTAAGAGAGTGATGCTTTATG 57.340 34.615 0.00 0.00 0.00 1.90
93 94 8.481314 TGAGATGTTAAGAGAGTGATGCTTTAT 58.519 33.333 0.00 0.00 0.00 1.40
94 95 7.840931 TGAGATGTTAAGAGAGTGATGCTTTA 58.159 34.615 0.00 0.00 0.00 1.85
95 96 6.705302 TGAGATGTTAAGAGAGTGATGCTTT 58.295 36.000 0.00 0.00 0.00 3.51
96 97 6.291648 TGAGATGTTAAGAGAGTGATGCTT 57.708 37.500 0.00 0.00 0.00 3.91
97 98 5.929058 TGAGATGTTAAGAGAGTGATGCT 57.071 39.130 0.00 0.00 0.00 3.79
98 99 6.514947 AGATGAGATGTTAAGAGAGTGATGC 58.485 40.000 0.00 0.00 0.00 3.91
99 100 7.014518 AGGAGATGAGATGTTAAGAGAGTGATG 59.985 40.741 0.00 0.00 0.00 3.07
100 101 7.068702 AGGAGATGAGATGTTAAGAGAGTGAT 58.931 38.462 0.00 0.00 0.00 3.06
101 102 6.430864 AGGAGATGAGATGTTAAGAGAGTGA 58.569 40.000 0.00 0.00 0.00 3.41
102 103 6.713762 AGGAGATGAGATGTTAAGAGAGTG 57.286 41.667 0.00 0.00 0.00 3.51
103 104 7.732222 AAAGGAGATGAGATGTTAAGAGAGT 57.268 36.000 0.00 0.00 0.00 3.24
104 105 8.477256 AGAAAAGGAGATGAGATGTTAAGAGAG 58.523 37.037 0.00 0.00 0.00 3.20
105 106 8.372877 AGAAAAGGAGATGAGATGTTAAGAGA 57.627 34.615 0.00 0.00 0.00 3.10
106 107 8.256605 TGAGAAAAGGAGATGAGATGTTAAGAG 58.743 37.037 0.00 0.00 0.00 2.85
107 108 8.138928 TGAGAAAAGGAGATGAGATGTTAAGA 57.861 34.615 0.00 0.00 0.00 2.10
108 109 8.256605 TCTGAGAAAAGGAGATGAGATGTTAAG 58.743 37.037 0.00 0.00 0.00 1.85
109 110 8.138928 TCTGAGAAAAGGAGATGAGATGTTAA 57.861 34.615 0.00 0.00 0.00 2.01
110 111 7.724490 TCTGAGAAAAGGAGATGAGATGTTA 57.276 36.000 0.00 0.00 0.00 2.41
111 112 6.617782 TCTGAGAAAAGGAGATGAGATGTT 57.382 37.500 0.00 0.00 0.00 2.71
112 113 6.811634 ATCTGAGAAAAGGAGATGAGATGT 57.188 37.500 0.00 0.00 0.00 3.06
113 114 9.781633 AATAATCTGAGAAAAGGAGATGAGATG 57.218 33.333 0.00 0.00 0.00 2.90
117 118 9.964354 TCAAAATAATCTGAGAAAAGGAGATGA 57.036 29.630 0.00 0.00 0.00 2.92
120 121 9.014297 GGTTCAAAATAATCTGAGAAAAGGAGA 57.986 33.333 0.00 0.00 0.00 3.71
121 122 9.018582 AGGTTCAAAATAATCTGAGAAAAGGAG 57.981 33.333 0.00 0.00 0.00 3.69
122 123 8.940397 AGGTTCAAAATAATCTGAGAAAAGGA 57.060 30.769 0.00 0.00 0.00 3.36
123 124 9.631452 GAAGGTTCAAAATAATCTGAGAAAAGG 57.369 33.333 0.00 0.00 0.00 3.11
124 125 9.631452 GGAAGGTTCAAAATAATCTGAGAAAAG 57.369 33.333 0.00 0.00 0.00 2.27
125 126 8.585018 GGGAAGGTTCAAAATAATCTGAGAAAA 58.415 33.333 0.00 0.00 0.00 2.29
126 127 7.728083 TGGGAAGGTTCAAAATAATCTGAGAAA 59.272 33.333 0.00 0.00 0.00 2.52
127 128 7.237982 TGGGAAGGTTCAAAATAATCTGAGAA 58.762 34.615 0.00 0.00 0.00 2.87
128 129 6.789268 TGGGAAGGTTCAAAATAATCTGAGA 58.211 36.000 0.00 0.00 0.00 3.27
129 130 7.315890 GTTGGGAAGGTTCAAAATAATCTGAG 58.684 38.462 0.00 0.00 0.00 3.35
130 131 6.072175 CGTTGGGAAGGTTCAAAATAATCTGA 60.072 38.462 0.00 0.00 0.00 3.27
131 132 6.092748 CGTTGGGAAGGTTCAAAATAATCTG 58.907 40.000 0.00 0.00 0.00 2.90
132 133 5.773176 ACGTTGGGAAGGTTCAAAATAATCT 59.227 36.000 0.00 0.00 0.00 2.40
133 134 5.861787 CACGTTGGGAAGGTTCAAAATAATC 59.138 40.000 0.00 0.00 0.00 1.75
134 135 5.536916 TCACGTTGGGAAGGTTCAAAATAAT 59.463 36.000 0.00 0.00 0.00 1.28
135 136 4.888239 TCACGTTGGGAAGGTTCAAAATAA 59.112 37.500 0.00 0.00 0.00 1.40
136 137 4.462133 TCACGTTGGGAAGGTTCAAAATA 58.538 39.130 0.00 0.00 0.00 1.40
137 138 3.292460 TCACGTTGGGAAGGTTCAAAAT 58.708 40.909 0.00 0.00 0.00 1.82
138 139 2.724454 TCACGTTGGGAAGGTTCAAAA 58.276 42.857 0.00 0.00 0.00 2.44
139 140 2.421751 TCACGTTGGGAAGGTTCAAA 57.578 45.000 0.00 0.00 0.00 2.69
140 141 2.649531 ATCACGTTGGGAAGGTTCAA 57.350 45.000 0.00 0.00 0.00 2.69
141 142 2.649531 AATCACGTTGGGAAGGTTCA 57.350 45.000 0.00 0.00 0.00 3.18
142 143 3.316868 TGAAAATCACGTTGGGAAGGTTC 59.683 43.478 0.00 0.00 0.00 3.62
143 144 3.067601 GTGAAAATCACGTTGGGAAGGTT 59.932 43.478 0.00 0.00 37.67 3.50
144 145 2.621526 GTGAAAATCACGTTGGGAAGGT 59.378 45.455 0.00 0.00 37.67 3.50
145 146 3.282831 GTGAAAATCACGTTGGGAAGG 57.717 47.619 0.00 0.00 37.67 3.46
181 182 9.063615 GGGAGAATATAACGTGAAAACCAATAT 57.936 33.333 0.00 0.00 0.00 1.28
182 183 7.225145 CGGGAGAATATAACGTGAAAACCAATA 59.775 37.037 0.00 0.00 0.00 1.90
183 184 6.037830 CGGGAGAATATAACGTGAAAACCAAT 59.962 38.462 0.00 0.00 0.00 3.16
184 185 5.352016 CGGGAGAATATAACGTGAAAACCAA 59.648 40.000 0.00 0.00 0.00 3.67
191 192 1.677576 ACGCGGGAGAATATAACGTGA 59.322 47.619 12.47 0.00 38.31 4.35
194 195 1.001048 TCCACGCGGGAGAATATAACG 60.001 52.381 11.66 0.00 42.15 3.18
213 214 2.333014 CGACTCAAGAAACCAGCTCTC 58.667 52.381 0.00 0.00 0.00 3.20
218 219 1.151668 CTGCCGACTCAAGAAACCAG 58.848 55.000 0.00 0.00 0.00 4.00
276 278 1.109323 AACTGGAGCCCAAACTGTGC 61.109 55.000 0.00 0.00 30.80 4.57
286 288 1.866853 CGCCTTTGGAAACTGGAGCC 61.867 60.000 0.00 0.00 0.00 4.70
293 295 1.305930 ATCCTCGCGCCTTTGGAAAC 61.306 55.000 0.00 0.00 31.87 2.78
336 338 0.534412 CAGGCGATGTGTCTCTTCCT 59.466 55.000 0.00 0.00 0.00 3.36
361 369 2.538939 GGTTTCGTGCACAACAGTTCTC 60.539 50.000 18.64 0.00 0.00 2.87
363 371 1.400494 AGGTTTCGTGCACAACAGTTC 59.600 47.619 18.64 2.20 0.00 3.01
396 404 1.792993 GCGTGATTGCATCAGCTGAAC 60.793 52.381 22.50 16.45 40.53 3.18
449 457 0.040958 GTTTTCTGAGCAGTGCGTGG 60.041 55.000 10.00 3.72 0.00 4.94
457 465 3.808728 AGCTACTTGTGTTTTCTGAGCA 58.191 40.909 0.00 0.00 0.00 4.26
467 475 3.059884 CGTGTGATGAAGCTACTTGTGT 58.940 45.455 0.00 0.00 0.00 3.72
476 486 0.792640 CACCTGACGTGTGATGAAGC 59.207 55.000 0.00 0.00 37.73 3.86
490 500 6.849588 AGTTTAAAGTTTACCGTACACCTG 57.150 37.500 0.00 0.00 0.00 4.00
497 507 5.105432 TGGGCAAAAGTTTAAAGTTTACCGT 60.105 36.000 18.90 3.54 32.51 4.83
498 508 5.349809 TGGGCAAAAGTTTAAAGTTTACCG 58.650 37.500 18.90 12.53 32.51 4.02
499 509 5.235616 GCTGGGCAAAAGTTTAAAGTTTACC 59.764 40.000 18.90 20.46 31.62 2.85
500 510 5.051307 CGCTGGGCAAAAGTTTAAAGTTTAC 60.051 40.000 18.90 14.36 31.62 2.01
501 511 5.044558 CGCTGGGCAAAAGTTTAAAGTTTA 58.955 37.500 18.90 4.96 31.62 2.01
502 512 3.868661 CGCTGGGCAAAAGTTTAAAGTTT 59.131 39.130 14.05 14.05 33.16 2.66
504 514 2.801699 GCGCTGGGCAAAAGTTTAAAGT 60.802 45.455 12.19 0.00 42.87 2.66
505 515 1.792367 GCGCTGGGCAAAAGTTTAAAG 59.208 47.619 12.19 0.00 42.87 1.85
506 516 1.859383 GCGCTGGGCAAAAGTTTAAA 58.141 45.000 12.19 0.00 42.87 1.52
507 517 0.318275 CGCGCTGGGCAAAAGTTTAA 60.318 50.000 17.13 0.00 43.84 1.52
561 637 0.683179 GGCTAATCAGGGGCGGTTTT 60.683 55.000 0.00 0.00 0.00 2.43
585 678 7.692908 CTAGATAGACTTCTAGTGCTTTTGC 57.307 40.000 10.91 0.00 40.15 3.68
617 1119 7.590279 CCGCCTTTATTTTTGTTTCTCTTCTA 58.410 34.615 0.00 0.00 0.00 2.10
625 1127 2.409012 CGGCCGCCTTTATTTTTGTTT 58.591 42.857 14.67 0.00 0.00 2.83
628 1130 0.459411 CCCGGCCGCCTTTATTTTTG 60.459 55.000 22.85 0.28 0.00 2.44
727 1245 4.189188 CGAGGGTACGTGGAGCGG 62.189 72.222 0.00 0.00 46.52 5.52
859 1387 1.444917 GCTTTATACAGGCGGGTGGC 61.445 60.000 0.00 0.00 42.51 5.01
860 1388 1.157870 CGCTTTATACAGGCGGGTGG 61.158 60.000 0.00 0.00 44.32 4.61
861 1389 2.307363 CGCTTTATACAGGCGGGTG 58.693 57.895 0.00 0.00 44.32 4.61
862 1390 4.848685 CGCTTTATACAGGCGGGT 57.151 55.556 0.00 0.00 44.32 5.28
866 1394 1.558383 CGCGTCGCTTTATACAGGC 59.442 57.895 16.36 0.00 0.00 4.85
909 1791 0.466543 GTAGTGGTGTGGTGGTGTGA 59.533 55.000 0.00 0.00 0.00 3.58
918 1800 1.301401 CGGTGGTGGTAGTGGTGTG 60.301 63.158 0.00 0.00 0.00 3.82
919 1801 3.144285 CGGTGGTGGTAGTGGTGT 58.856 61.111 0.00 0.00 0.00 4.16
926 1808 2.602869 TAACCGGCGGTGGTGGTA 60.603 61.111 34.87 18.20 42.89 3.25
966 1851 0.478507 GAGAGGGAGAGGGAGAGAGG 59.521 65.000 0.00 0.00 0.00 3.69
971 1856 0.628522 TGTCAGAGAGGGAGAGGGAG 59.371 60.000 0.00 0.00 0.00 4.30
982 1867 1.203441 ATGGCTGCCCTTGTCAGAGA 61.203 55.000 17.53 0.00 33.54 3.10
1634 2537 3.323136 CGGCAGCGTCGTCTATGC 61.323 66.667 0.00 0.00 40.71 3.14
1805 2714 3.637273 GGTGGGGCTTCGGTGTCT 61.637 66.667 0.00 0.00 0.00 3.41
1858 2767 6.442513 AATTAATTACTGAAGCTGCTGTCC 57.557 37.500 7.63 0.00 0.00 4.02
1925 2838 1.447317 AATGATGCATCCGGTTCCGC 61.447 55.000 23.67 0.28 0.00 5.54
1930 2843 2.092753 ACAGAAGAATGATGCATCCGGT 60.093 45.455 23.67 10.75 0.00 5.28
1931 2844 2.569059 ACAGAAGAATGATGCATCCGG 58.431 47.619 23.67 10.13 0.00 5.14
2003 2920 1.006391 CACGAACGCCACGCTTAATAG 60.006 52.381 0.00 0.00 0.00 1.73
2042 2960 2.432628 CCGTTGCTGGTCTCGGAC 60.433 66.667 0.00 0.00 44.86 4.79
2057 2975 6.563222 TTAGTTCCAAGTAATCCAAAACCG 57.437 37.500 0.00 0.00 0.00 4.44
2070 2988 6.630071 CCCATTACAACCATTTAGTTCCAAG 58.370 40.000 0.00 0.00 0.00 3.61
2097 3015 1.875488 GAAACAGGGGGAGGCTACTA 58.125 55.000 0.00 0.00 0.00 1.82
2149 3067 0.671781 CCGCTAGCTGCACTTGAAGT 60.672 55.000 13.93 0.00 43.06 3.01
2150 3068 0.671781 ACCGCTAGCTGCACTTGAAG 60.672 55.000 13.93 0.00 43.06 3.02
2151 3069 0.950555 CACCGCTAGCTGCACTTGAA 60.951 55.000 13.93 0.00 43.06 2.69
2152 3070 1.374631 CACCGCTAGCTGCACTTGA 60.375 57.895 13.93 0.00 43.06 3.02
2153 3071 1.630244 GACACCGCTAGCTGCACTTG 61.630 60.000 13.93 3.10 43.06 3.16
2154 3072 1.374758 GACACCGCTAGCTGCACTT 60.375 57.895 13.93 0.00 43.06 3.16
2246 3165 1.902508 GAGACCCATCCTCACAAGTCA 59.097 52.381 0.00 0.00 0.00 3.41
2289 3208 2.112511 AGGAAAAAGAAGGGGCCAGAAT 59.887 45.455 4.39 0.00 0.00 2.40
2290 3209 1.503347 AGGAAAAAGAAGGGGCCAGAA 59.497 47.619 4.39 0.00 0.00 3.02
2291 3210 1.158007 AGGAAAAAGAAGGGGCCAGA 58.842 50.000 4.39 0.00 0.00 3.86
2292 3211 2.015456 AAGGAAAAAGAAGGGGCCAG 57.985 50.000 4.39 0.00 0.00 4.85
2293 3212 2.325484 GAAAGGAAAAAGAAGGGGCCA 58.675 47.619 4.39 0.00 0.00 5.36
2294 3213 1.272490 CGAAAGGAAAAAGAAGGGGCC 59.728 52.381 0.00 0.00 0.00 5.80
2295 3214 2.724977 CGAAAGGAAAAAGAAGGGGC 57.275 50.000 0.00 0.00 0.00 5.80
2335 3254 3.782244 GCAAGCTGCGACCGACTG 61.782 66.667 0.00 0.00 31.71 3.51
2341 3260 4.209028 GAAGAATTCAAGCAAGCTGCGAC 61.209 47.826 8.44 0.00 46.94 5.19
2342 3261 2.095567 GAAGAATTCAAGCAAGCTGCGA 60.096 45.455 8.44 0.00 46.94 5.10
2343 3262 2.248487 GAAGAATTCAAGCAAGCTGCG 58.752 47.619 8.44 0.00 46.94 5.18
2344 3263 7.766619 AAGTCGAAGAATTCAAGCAAGCTGC 62.767 44.000 8.44 0.00 43.08 5.25
2378 3297 2.876581 AGTGGCTTTCCTCCGATTTTT 58.123 42.857 0.00 0.00 0.00 1.94
2383 3302 2.551504 GGTAAAAGTGGCTTTCCTCCGA 60.552 50.000 0.00 0.00 31.99 4.55
2384 3303 1.810755 GGTAAAAGTGGCTTTCCTCCG 59.189 52.381 0.00 0.00 31.99 4.63
2385 3304 2.871453 TGGTAAAAGTGGCTTTCCTCC 58.129 47.619 0.00 0.37 31.99 4.30
2389 3311 6.144078 TCTCTTTTGGTAAAAGTGGCTTTC 57.856 37.500 12.25 0.00 46.18 2.62
2394 3316 5.532779 AGCTCTTCTCTTTTGGTAAAAGTGG 59.467 40.000 12.25 8.03 46.18 4.00
2400 3322 8.418597 TCTAGTAAGCTCTTCTCTTTTGGTAA 57.581 34.615 0.00 0.00 0.00 2.85
2407 3329 8.644374 TCTTCTTTCTAGTAAGCTCTTCTCTT 57.356 34.615 4.32 0.00 0.00 2.85
2417 3339 9.915629 TTGTTAAGCTCTCTTCTTTCTAGTAAG 57.084 33.333 2.82 2.82 33.85 2.34
2420 3342 8.038351 GGATTGTTAAGCTCTCTTCTTTCTAGT 58.962 37.037 0.00 0.00 33.85 2.57
2421 3343 8.037758 TGGATTGTTAAGCTCTCTTCTTTCTAG 58.962 37.037 0.00 0.00 33.85 2.43
2422 3344 7.907389 TGGATTGTTAAGCTCTCTTCTTTCTA 58.093 34.615 0.00 0.00 33.85 2.10
2423 3345 6.773638 TGGATTGTTAAGCTCTCTTCTTTCT 58.226 36.000 0.00 0.00 33.85 2.52
2424 3346 7.335422 TGATGGATTGTTAAGCTCTCTTCTTTC 59.665 37.037 0.00 0.00 33.85 2.62
2425 3347 7.170965 TGATGGATTGTTAAGCTCTCTTCTTT 58.829 34.615 0.00 0.00 33.85 2.52
2426 3348 6.715280 TGATGGATTGTTAAGCTCTCTTCTT 58.285 36.000 0.00 0.00 33.85 2.52
2427 3349 6.305272 TGATGGATTGTTAAGCTCTCTTCT 57.695 37.500 0.00 0.00 33.85 2.85
2428 3350 7.095271 GCTATGATGGATTGTTAAGCTCTCTTC 60.095 40.741 0.00 0.00 33.85 2.87
2429 3351 6.709846 GCTATGATGGATTGTTAAGCTCTCTT 59.290 38.462 0.00 0.00 36.35 2.85
2430 3352 6.043012 AGCTATGATGGATTGTTAAGCTCTCT 59.957 38.462 0.00 0.00 34.05 3.10
2431 3353 6.229733 AGCTATGATGGATTGTTAAGCTCTC 58.770 40.000 0.00 0.00 34.05 3.20
2432 3354 6.185114 AGCTATGATGGATTGTTAAGCTCT 57.815 37.500 0.00 0.00 34.05 4.09
2433 3355 6.593382 CCTAGCTATGATGGATTGTTAAGCTC 59.407 42.308 0.00 0.00 39.60 4.09
2434 3356 6.471146 CCTAGCTATGATGGATTGTTAAGCT 58.529 40.000 0.00 0.00 41.61 3.74
2435 3357 5.645497 CCCTAGCTATGATGGATTGTTAAGC 59.355 44.000 0.00 0.00 0.00 3.09
2436 3358 7.009179 TCCCTAGCTATGATGGATTGTTAAG 57.991 40.000 0.00 0.00 0.00 1.85
2437 3359 7.574021 ATCCCTAGCTATGATGGATTGTTAA 57.426 36.000 0.00 0.00 31.87 2.01
2438 3360 8.679344 TTATCCCTAGCTATGATGGATTGTTA 57.321 34.615 15.34 1.08 37.10 2.41
2439 3361 7.574021 TTATCCCTAGCTATGATGGATTGTT 57.426 36.000 15.34 1.06 37.10 2.83
2440 3362 7.404104 TGATTATCCCTAGCTATGATGGATTGT 59.596 37.037 15.34 8.07 37.10 2.71
2441 3363 7.799081 TGATTATCCCTAGCTATGATGGATTG 58.201 38.462 15.34 0.00 37.10 2.67
2442 3364 7.848361 TCTGATTATCCCTAGCTATGATGGATT 59.152 37.037 15.34 3.81 37.10 3.01
2443 3365 7.368631 TCTGATTATCCCTAGCTATGATGGAT 58.631 38.462 13.49 14.18 39.16 3.41
2444 3366 6.745857 TCTGATTATCCCTAGCTATGATGGA 58.254 40.000 13.49 9.17 0.00 3.41
2445 3367 7.429374 TTCTGATTATCCCTAGCTATGATGG 57.571 40.000 13.49 3.52 0.00 3.51
2446 3368 9.327628 CAATTCTGATTATCCCTAGCTATGATG 57.672 37.037 13.49 0.00 0.00 3.07
2447 3369 9.055689 ACAATTCTGATTATCCCTAGCTATGAT 57.944 33.333 9.95 9.95 0.00 2.45
2448 3370 8.316946 CACAATTCTGATTATCCCTAGCTATGA 58.683 37.037 0.00 0.00 0.00 2.15
2449 3371 7.551974 CCACAATTCTGATTATCCCTAGCTATG 59.448 40.741 0.00 0.00 0.00 2.23
2450 3372 7.459125 TCCACAATTCTGATTATCCCTAGCTAT 59.541 37.037 0.00 0.00 0.00 2.97
2451 3373 6.787458 TCCACAATTCTGATTATCCCTAGCTA 59.213 38.462 0.00 0.00 0.00 3.32
2452 3374 5.608437 TCCACAATTCTGATTATCCCTAGCT 59.392 40.000 0.00 0.00 0.00 3.32
2453 3375 5.869579 TCCACAATTCTGATTATCCCTAGC 58.130 41.667 0.00 0.00 0.00 3.42
2454 3376 6.471146 CCTCCACAATTCTGATTATCCCTAG 58.529 44.000 0.00 0.00 0.00 3.02
2455 3377 5.310594 CCCTCCACAATTCTGATTATCCCTA 59.689 44.000 0.00 0.00 0.00 3.53
2456 3378 4.105377 CCCTCCACAATTCTGATTATCCCT 59.895 45.833 0.00 0.00 0.00 4.20
2457 3379 4.141158 ACCCTCCACAATTCTGATTATCCC 60.141 45.833 0.00 0.00 0.00 3.85
2458 3380 5.053978 ACCCTCCACAATTCTGATTATCC 57.946 43.478 0.00 0.00 0.00 2.59
2459 3381 7.410120 AAAACCCTCCACAATTCTGATTATC 57.590 36.000 0.00 0.00 0.00 1.75
2460 3382 7.362920 CGAAAAACCCTCCACAATTCTGATTAT 60.363 37.037 0.00 0.00 0.00 1.28
2461 3383 6.072175 CGAAAAACCCTCCACAATTCTGATTA 60.072 38.462 0.00 0.00 0.00 1.75
2462 3384 5.278957 CGAAAAACCCTCCACAATTCTGATT 60.279 40.000 0.00 0.00 0.00 2.57
2463 3385 4.218417 CGAAAAACCCTCCACAATTCTGAT 59.782 41.667 0.00 0.00 0.00 2.90
2464 3386 3.568007 CGAAAAACCCTCCACAATTCTGA 59.432 43.478 0.00 0.00 0.00 3.27
2465 3387 3.857010 GCGAAAAACCCTCCACAATTCTG 60.857 47.826 0.00 0.00 0.00 3.02
2466 3388 2.296190 GCGAAAAACCCTCCACAATTCT 59.704 45.455 0.00 0.00 0.00 2.40
2467 3389 2.609491 GGCGAAAAACCCTCCACAATTC 60.609 50.000 0.00 0.00 0.00 2.17
2468 3390 1.343142 GGCGAAAAACCCTCCACAATT 59.657 47.619 0.00 0.00 0.00 2.32
2469 3391 0.966179 GGCGAAAAACCCTCCACAAT 59.034 50.000 0.00 0.00 0.00 2.71
2470 3392 1.110518 GGGCGAAAAACCCTCCACAA 61.111 55.000 0.00 0.00 44.68 3.33
2471 3393 1.529713 GGGCGAAAAACCCTCCACA 60.530 57.895 0.00 0.00 44.68 4.17
2472 3394 2.622962 CGGGCGAAAAACCCTCCAC 61.623 63.158 0.00 0.00 46.04 4.02
2473 3395 2.281900 CGGGCGAAAAACCCTCCA 60.282 61.111 0.00 0.00 46.04 3.86
2474 3396 0.963856 ATTCGGGCGAAAAACCCTCC 60.964 55.000 0.00 0.00 46.04 4.30
2475 3397 0.885879 AATTCGGGCGAAAAACCCTC 59.114 50.000 0.00 0.00 46.04 4.30
2476 3398 2.203470 TAATTCGGGCGAAAAACCCT 57.797 45.000 0.00 0.00 46.04 4.34
2477 3399 3.119424 TGAATAATTCGGGCGAAAAACCC 60.119 43.478 0.00 0.00 44.63 4.11
2478 3400 4.099380 TGAATAATTCGGGCGAAAAACC 57.901 40.909 0.00 0.00 37.69 3.27
2479 3401 5.631929 AGTTTGAATAATTCGGGCGAAAAAC 59.368 36.000 0.00 0.00 37.69 2.43
2480 3402 5.774630 AGTTTGAATAATTCGGGCGAAAAA 58.225 33.333 0.00 0.00 37.69 1.94
2481 3403 5.379732 AGTTTGAATAATTCGGGCGAAAA 57.620 34.783 0.00 0.00 37.69 2.29
2482 3404 6.687081 ATAGTTTGAATAATTCGGGCGAAA 57.313 33.333 0.00 0.00 37.69 3.46
2483 3405 6.987992 ACTATAGTTTGAATAATTCGGGCGAA 59.012 34.615 0.00 0.00 38.59 4.70
2484 3406 6.422701 CACTATAGTTTGAATAATTCGGGCGA 59.577 38.462 1.56 0.00 0.00 5.54
2485 3407 6.422701 TCACTATAGTTTGAATAATTCGGGCG 59.577 38.462 1.56 0.00 0.00 6.13
2486 3408 7.724305 TCACTATAGTTTGAATAATTCGGGC 57.276 36.000 1.56 0.00 0.00 6.13
2495 3417 8.893727 GTGCCTGTTTATCACTATAGTTTGAAT 58.106 33.333 1.56 0.00 0.00 2.57
2496 3418 8.100791 AGTGCCTGTTTATCACTATAGTTTGAA 58.899 33.333 1.56 0.00 39.08 2.69
2497 3419 7.620880 AGTGCCTGTTTATCACTATAGTTTGA 58.379 34.615 1.56 0.00 39.08 2.69
2498 3420 7.549134 TGAGTGCCTGTTTATCACTATAGTTTG 59.451 37.037 1.56 0.00 40.74 2.93
2499 3421 7.549488 GTGAGTGCCTGTTTATCACTATAGTTT 59.451 37.037 1.56 0.00 40.74 2.66
2500 3422 7.042335 GTGAGTGCCTGTTTATCACTATAGTT 58.958 38.462 1.56 0.00 40.74 2.24
2501 3423 6.381420 AGTGAGTGCCTGTTTATCACTATAGT 59.619 38.462 0.00 0.00 46.50 2.12
2502 3424 6.810911 AGTGAGTGCCTGTTTATCACTATAG 58.189 40.000 4.43 0.00 46.50 1.31
2503 3425 6.791867 AGTGAGTGCCTGTTTATCACTATA 57.208 37.500 4.43 0.00 46.50 1.31
2504 3426 5.683876 AGTGAGTGCCTGTTTATCACTAT 57.316 39.130 4.43 0.00 46.50 2.12
2507 3429 3.433615 GTGAGTGAGTGCCTGTTTATCAC 59.566 47.826 0.00 0.00 40.41 3.06
2508 3430 3.324846 AGTGAGTGAGTGCCTGTTTATCA 59.675 43.478 0.00 0.00 0.00 2.15
2509 3431 3.929610 GAGTGAGTGAGTGCCTGTTTATC 59.070 47.826 0.00 0.00 0.00 1.75
2510 3432 3.324846 TGAGTGAGTGAGTGCCTGTTTAT 59.675 43.478 0.00 0.00 0.00 1.40
2511 3433 2.698274 TGAGTGAGTGAGTGCCTGTTTA 59.302 45.455 0.00 0.00 0.00 2.01
2512 3434 1.486310 TGAGTGAGTGAGTGCCTGTTT 59.514 47.619 0.00 0.00 0.00 2.83
2513 3435 1.123077 TGAGTGAGTGAGTGCCTGTT 58.877 50.000 0.00 0.00 0.00 3.16
2514 3436 0.390860 GTGAGTGAGTGAGTGCCTGT 59.609 55.000 0.00 0.00 0.00 4.00
2515 3437 0.665670 CGTGAGTGAGTGAGTGCCTG 60.666 60.000 0.00 0.00 0.00 4.85
2516 3438 1.662608 CGTGAGTGAGTGAGTGCCT 59.337 57.895 0.00 0.00 0.00 4.75
2517 3439 2.024319 GCGTGAGTGAGTGAGTGCC 61.024 63.158 0.00 0.00 0.00 5.01
2518 3440 2.024319 GGCGTGAGTGAGTGAGTGC 61.024 63.158 0.00 0.00 0.00 4.40
2519 3441 0.037882 ATGGCGTGAGTGAGTGAGTG 60.038 55.000 0.00 0.00 0.00 3.51
2520 3442 0.244994 GATGGCGTGAGTGAGTGAGT 59.755 55.000 0.00 0.00 0.00 3.41
2521 3443 0.244721 TGATGGCGTGAGTGAGTGAG 59.755 55.000 0.00 0.00 0.00 3.51
2522 3444 0.678950 TTGATGGCGTGAGTGAGTGA 59.321 50.000 0.00 0.00 0.00 3.41
2523 3445 1.073964 CTTGATGGCGTGAGTGAGTG 58.926 55.000 0.00 0.00 0.00 3.51
2524 3446 0.036952 CCTTGATGGCGTGAGTGAGT 60.037 55.000 0.00 0.00 0.00 3.41
2525 3447 0.742281 CCCTTGATGGCGTGAGTGAG 60.742 60.000 0.00 0.00 0.00 3.51
2526 3448 1.296392 CCCTTGATGGCGTGAGTGA 59.704 57.895 0.00 0.00 0.00 3.41
2527 3449 0.606401 AACCCTTGATGGCGTGAGTG 60.606 55.000 0.00 0.00 0.00 3.51
2528 3450 0.110486 AAACCCTTGATGGCGTGAGT 59.890 50.000 0.00 0.00 0.00 3.41
2529 3451 1.247567 AAAACCCTTGATGGCGTGAG 58.752 50.000 0.00 0.00 0.00 3.51
2530 3452 1.611491 GAAAAACCCTTGATGGCGTGA 59.389 47.619 0.00 0.00 0.00 4.35
2531 3453 1.665735 CGAAAAACCCTTGATGGCGTG 60.666 52.381 0.00 0.00 0.00 5.34
2532 3454 0.596082 CGAAAAACCCTTGATGGCGT 59.404 50.000 0.00 0.00 0.00 5.68
2533 3455 0.732538 GCGAAAAACCCTTGATGGCG 60.733 55.000 0.00 0.00 0.00 5.69
2534 3456 0.316841 TGCGAAAAACCCTTGATGGC 59.683 50.000 0.00 0.00 0.00 4.40
2535 3457 2.230992 TCATGCGAAAAACCCTTGATGG 59.769 45.455 0.00 0.00 0.00 3.51
2536 3458 3.574284 TCATGCGAAAAACCCTTGATG 57.426 42.857 0.00 0.00 0.00 3.07
2537 3459 4.806640 ATTCATGCGAAAAACCCTTGAT 57.193 36.364 0.00 0.00 34.01 2.57
2538 3460 4.599047 AATTCATGCGAAAAACCCTTGA 57.401 36.364 0.00 0.00 34.01 3.02
2539 3461 6.589523 TGAATAATTCATGCGAAAAACCCTTG 59.410 34.615 0.00 0.00 34.08 3.61
2540 3462 6.696411 TGAATAATTCATGCGAAAAACCCTT 58.304 32.000 0.00 0.00 34.08 3.95
2541 3463 6.279513 TGAATAATTCATGCGAAAAACCCT 57.720 33.333 0.00 0.00 34.08 4.34
2542 3464 6.959671 TTGAATAATTCATGCGAAAAACCC 57.040 33.333 0.00 0.00 39.84 4.11
2543 3465 6.947680 CGTTTGAATAATTCATGCGAAAAACC 59.052 34.615 0.00 0.00 39.84 3.27
2544 3466 7.715821 TCGTTTGAATAATTCATGCGAAAAAC 58.284 30.769 0.00 0.00 40.50 2.43
2545 3467 7.859613 TCGTTTGAATAATTCATGCGAAAAA 57.140 28.000 0.00 0.00 40.50 1.94
2546 3468 7.859613 TTCGTTTGAATAATTCATGCGAAAA 57.140 28.000 5.38 0.00 44.71 2.29
2549 3471 7.752686 TCAAATTCGTTTGAATAATTCATGCGA 59.247 29.630 0.00 0.00 44.02 5.10
2550 3472 7.883655 TCAAATTCGTTTGAATAATTCATGCG 58.116 30.769 1.41 0.00 44.02 4.73
2587 3509 9.847224 ACGGATGGAGTATAATTTAGAATTGTT 57.153 29.630 0.00 0.00 0.00 2.83
2588 3510 9.490379 GACGGATGGAGTATAATTTAGAATTGT 57.510 33.333 0.00 0.00 0.00 2.71
2589 3511 8.936864 GGACGGATGGAGTATAATTTAGAATTG 58.063 37.037 0.00 0.00 0.00 2.32
2590 3512 8.101419 GGGACGGATGGAGTATAATTTAGAATT 58.899 37.037 0.00 0.00 0.00 2.17
2591 3513 7.236847 TGGGACGGATGGAGTATAATTTAGAAT 59.763 37.037 0.00 0.00 0.00 2.40
2592 3514 6.555738 TGGGACGGATGGAGTATAATTTAGAA 59.444 38.462 0.00 0.00 0.00 2.10
2593 3515 6.079336 TGGGACGGATGGAGTATAATTTAGA 58.921 40.000 0.00 0.00 0.00 2.10
2594 3516 6.354794 TGGGACGGATGGAGTATAATTTAG 57.645 41.667 0.00 0.00 0.00 1.85
2595 3517 6.945636 ATGGGACGGATGGAGTATAATTTA 57.054 37.500 0.00 0.00 0.00 1.40
2596 3518 5.843019 ATGGGACGGATGGAGTATAATTT 57.157 39.130 0.00 0.00 0.00 1.82
2597 3519 6.945636 TTATGGGACGGATGGAGTATAATT 57.054 37.500 0.00 0.00 0.00 1.40
2598 3520 8.798975 ATATTATGGGACGGATGGAGTATAAT 57.201 34.615 0.00 0.00 0.00 1.28
2599 3521 9.717994 TTATATTATGGGACGGATGGAGTATAA 57.282 33.333 0.00 0.00 0.00 0.98
2600 3522 9.363401 CTTATATTATGGGACGGATGGAGTATA 57.637 37.037 0.00 0.00 0.00 1.47
2601 3523 8.065627 TCTTATATTATGGGACGGATGGAGTAT 58.934 37.037 0.00 0.00 0.00 2.12
2602 3524 7.415908 TCTTATATTATGGGACGGATGGAGTA 58.584 38.462 0.00 0.00 0.00 2.59
2603 3525 6.261435 TCTTATATTATGGGACGGATGGAGT 58.739 40.000 0.00 0.00 0.00 3.85
2604 3526 6.381420 ACTCTTATATTATGGGACGGATGGAG 59.619 42.308 0.00 0.00 0.00 3.86
2605 3527 6.154534 CACTCTTATATTATGGGACGGATGGA 59.845 42.308 0.00 0.00 0.00 3.41
2606 3528 6.070767 ACACTCTTATATTATGGGACGGATGG 60.071 42.308 0.00 0.00 0.00 3.51
2607 3529 6.936279 ACACTCTTATATTATGGGACGGATG 58.064 40.000 0.00 0.00 0.00 3.51
2608 3530 7.554959 AACACTCTTATATTATGGGACGGAT 57.445 36.000 0.00 0.00 0.00 4.18
2609 3531 6.989155 AACACTCTTATATTATGGGACGGA 57.011 37.500 0.00 0.00 0.00 4.69
2610 3532 7.442656 AGAAACACTCTTATATTATGGGACGG 58.557 38.462 0.00 0.00 0.00 4.79
2611 3533 8.888579 AAGAAACACTCTTATATTATGGGACG 57.111 34.615 0.00 0.00 42.90 4.79
2622 3544 8.807581 CGCAAAAAGAAAAAGAAACACTCTTAT 58.192 29.630 0.00 0.00 44.00 1.73
2623 3545 7.274686 CCGCAAAAAGAAAAAGAAACACTCTTA 59.725 33.333 0.00 0.00 44.00 2.10
2624 3546 6.090763 CCGCAAAAAGAAAAAGAAACACTCTT 59.909 34.615 0.00 0.00 46.92 2.85
2625 3547 5.576774 CCGCAAAAAGAAAAAGAAACACTCT 59.423 36.000 0.00 0.00 35.13 3.24
2626 3548 5.220397 CCCGCAAAAAGAAAAAGAAACACTC 60.220 40.000 0.00 0.00 0.00 3.51
2627 3549 4.629634 CCCGCAAAAAGAAAAAGAAACACT 59.370 37.500 0.00 0.00 0.00 3.55
2628 3550 4.627900 TCCCGCAAAAAGAAAAAGAAACAC 59.372 37.500 0.00 0.00 0.00 3.32
2629 3551 4.822026 TCCCGCAAAAAGAAAAAGAAACA 58.178 34.783 0.00 0.00 0.00 2.83
2630 3552 5.788055 TTCCCGCAAAAAGAAAAAGAAAC 57.212 34.783 0.00 0.00 0.00 2.78
2631 3553 9.765795 TTATATTCCCGCAAAAAGAAAAAGAAA 57.234 25.926 0.00 0.00 0.00 2.52
2632 3554 9.418045 CTTATATTCCCGCAAAAAGAAAAAGAA 57.582 29.630 0.00 0.00 0.00 2.52
2633 3555 8.798402 TCTTATATTCCCGCAAAAAGAAAAAGA 58.202 29.630 0.00 0.00 0.00 2.52
2634 3556 8.980143 TCTTATATTCCCGCAAAAAGAAAAAG 57.020 30.769 0.00 0.00 0.00 2.27
2635 3557 8.581578 ACTCTTATATTCCCGCAAAAAGAAAAA 58.418 29.630 0.00 0.00 0.00 1.94
2636 3558 8.026607 CACTCTTATATTCCCGCAAAAAGAAAA 58.973 33.333 0.00 0.00 0.00 2.29
2637 3559 7.175990 ACACTCTTATATTCCCGCAAAAAGAAA 59.824 33.333 0.00 0.00 0.00 2.52
2638 3560 6.657541 ACACTCTTATATTCCCGCAAAAAGAA 59.342 34.615 0.00 0.00 0.00 2.52
2639 3561 6.177610 ACACTCTTATATTCCCGCAAAAAGA 58.822 36.000 0.00 0.00 0.00 2.52
2640 3562 6.436843 ACACTCTTATATTCCCGCAAAAAG 57.563 37.500 0.00 0.00 0.00 2.27
2641 3563 6.827586 AACACTCTTATATTCCCGCAAAAA 57.172 33.333 0.00 0.00 0.00 1.94
2642 3564 6.657541 AGAAACACTCTTATATTCCCGCAAAA 59.342 34.615 0.00 0.00 0.00 2.44
2643 3565 6.093495 CAGAAACACTCTTATATTCCCGCAAA 59.907 38.462 0.00 0.00 29.07 3.68
2644 3566 5.584649 CAGAAACACTCTTATATTCCCGCAA 59.415 40.000 0.00 0.00 29.07 4.85
2645 3567 5.105106 TCAGAAACACTCTTATATTCCCGCA 60.105 40.000 0.00 0.00 29.07 5.69
2646 3568 5.357257 TCAGAAACACTCTTATATTCCCGC 58.643 41.667 0.00 0.00 29.07 6.13
2655 3577 9.256228 AGGTTGACTATATCAGAAACACTCTTA 57.744 33.333 0.00 0.00 38.99 2.10
2656 3578 8.140112 AGGTTGACTATATCAGAAACACTCTT 57.860 34.615 0.00 0.00 38.99 2.85
2657 3579 7.726033 AGGTTGACTATATCAGAAACACTCT 57.274 36.000 0.00 0.00 38.99 3.24
2663 3585 9.961265 CGTTGTATAGGTTGACTATATCAGAAA 57.039 33.333 0.00 0.00 44.29 2.52
2664 3586 9.346005 TCGTTGTATAGGTTGACTATATCAGAA 57.654 33.333 0.00 0.00 44.29 3.02
2665 3587 8.913487 TCGTTGTATAGGTTGACTATATCAGA 57.087 34.615 0.00 0.00 44.29 3.27
2666 3588 9.561270 CATCGTTGTATAGGTTGACTATATCAG 57.439 37.037 0.00 0.00 44.29 2.90
2667 3589 9.074576 ACATCGTTGTATAGGTTGACTATATCA 57.925 33.333 0.00 0.00 44.29 2.15
2668 3590 9.909644 AACATCGTTGTATAGGTTGACTATATC 57.090 33.333 0.00 0.00 44.29 1.63
2670 3592 9.524106 CAAACATCGTTGTATAGGTTGACTATA 57.476 33.333 0.00 0.00 42.36 1.31
2671 3593 8.038944 ACAAACATCGTTGTATAGGTTGACTAT 58.961 33.333 12.57 0.00 39.94 2.12
2672 3594 7.380536 ACAAACATCGTTGTATAGGTTGACTA 58.619 34.615 12.57 0.00 39.94 2.59
2673 3595 6.228258 ACAAACATCGTTGTATAGGTTGACT 58.772 36.000 12.57 0.00 39.94 3.41
2674 3596 6.476243 ACAAACATCGTTGTATAGGTTGAC 57.524 37.500 12.57 0.00 39.94 3.18
2675 3597 7.499321 AAACAAACATCGTTGTATAGGTTGA 57.501 32.000 12.57 0.00 40.86 3.18
2676 3598 7.114247 CCAAAACAAACATCGTTGTATAGGTTG 59.886 37.037 0.00 3.36 40.86 3.77
2677 3599 7.142680 CCAAAACAAACATCGTTGTATAGGTT 58.857 34.615 0.00 0.41 40.86 3.50
2678 3600 6.294286 CCCAAAACAAACATCGTTGTATAGGT 60.294 38.462 0.00 0.00 40.86 3.08
2679 3601 6.090129 CCCAAAACAAACATCGTTGTATAGG 58.910 40.000 0.00 0.00 40.86 2.57
2680 3602 6.090129 CCCCAAAACAAACATCGTTGTATAG 58.910 40.000 0.00 0.00 40.86 1.31
2681 3603 5.047943 CCCCCAAAACAAACATCGTTGTATA 60.048 40.000 0.00 0.00 40.86 1.47
2682 3604 4.262249 CCCCCAAAACAAACATCGTTGTAT 60.262 41.667 0.00 0.00 40.86 2.29
2683 3605 3.068307 CCCCCAAAACAAACATCGTTGTA 59.932 43.478 0.00 0.00 40.86 2.41
2684 3606 2.159028 CCCCCAAAACAAACATCGTTGT 60.159 45.455 0.00 0.00 43.58 3.32
2685 3607 2.101582 TCCCCCAAAACAAACATCGTTG 59.898 45.455 0.00 0.00 34.52 4.10
2686 3608 2.364002 CTCCCCCAAAACAAACATCGTT 59.636 45.455 0.00 0.00 0.00 3.85
2687 3609 1.960689 CTCCCCCAAAACAAACATCGT 59.039 47.619 0.00 0.00 0.00 3.73
2688 3610 1.960689 ACTCCCCCAAAACAAACATCG 59.039 47.619 0.00 0.00 0.00 3.84
2689 3611 3.494223 CCAACTCCCCCAAAACAAACATC 60.494 47.826 0.00 0.00 0.00 3.06
2690 3612 2.437651 CCAACTCCCCCAAAACAAACAT 59.562 45.455 0.00 0.00 0.00 2.71
2691 3613 1.834263 CCAACTCCCCCAAAACAAACA 59.166 47.619 0.00 0.00 0.00 2.83
2692 3614 2.102420 CTCCAACTCCCCCAAAACAAAC 59.898 50.000 0.00 0.00 0.00 2.93
2693 3615 2.393646 CTCCAACTCCCCCAAAACAAA 58.606 47.619 0.00 0.00 0.00 2.83
2694 3616 1.412361 CCTCCAACTCCCCCAAAACAA 60.412 52.381 0.00 0.00 0.00 2.83
2695 3617 0.187361 CCTCCAACTCCCCCAAAACA 59.813 55.000 0.00 0.00 0.00 2.83
2696 3618 0.187606 ACCTCCAACTCCCCCAAAAC 59.812 55.000 0.00 0.00 0.00 2.43
2697 3619 1.708551 CTACCTCCAACTCCCCCAAAA 59.291 52.381 0.00 0.00 0.00 2.44
2698 3620 1.368374 CTACCTCCAACTCCCCCAAA 58.632 55.000 0.00 0.00 0.00 3.28
2699 3621 0.195096 ACTACCTCCAACTCCCCCAA 59.805 55.000 0.00 0.00 0.00 4.12
2700 3622 0.546747 CACTACCTCCAACTCCCCCA 60.547 60.000 0.00 0.00 0.00 4.96
2701 3623 0.546988 ACACTACCTCCAACTCCCCC 60.547 60.000 0.00 0.00 0.00 5.40
2702 3624 0.613777 CACACTACCTCCAACTCCCC 59.386 60.000 0.00 0.00 0.00 4.81
2703 3625 0.613777 CCACACTACCTCCAACTCCC 59.386 60.000 0.00 0.00 0.00 4.30
2704 3626 1.002087 CACCACACTACCTCCAACTCC 59.998 57.143 0.00 0.00 0.00 3.85
2705 3627 1.002087 CCACCACACTACCTCCAACTC 59.998 57.143 0.00 0.00 0.00 3.01
2706 3628 1.056660 CCACCACACTACCTCCAACT 58.943 55.000 0.00 0.00 0.00 3.16
2707 3629 0.036306 CCCACCACACTACCTCCAAC 59.964 60.000 0.00 0.00 0.00 3.77
2708 3630 0.104882 TCCCACCACACTACCTCCAA 60.105 55.000 0.00 0.00 0.00 3.53
2709 3631 0.118346 ATCCCACCACACTACCTCCA 59.882 55.000 0.00 0.00 0.00 3.86
2710 3632 0.541863 CATCCCACCACACTACCTCC 59.458 60.000 0.00 0.00 0.00 4.30
2711 3633 0.541863 CCATCCCACCACACTACCTC 59.458 60.000 0.00 0.00 0.00 3.85
2712 3634 1.562672 GCCATCCCACCACACTACCT 61.563 60.000 0.00 0.00 0.00 3.08
2713 3635 1.077716 GCCATCCCACCACACTACC 60.078 63.158 0.00 0.00 0.00 3.18
2714 3636 1.077716 GGCCATCCCACCACACTAC 60.078 63.158 0.00 0.00 0.00 2.73
2715 3637 3.410541 GGCCATCCCACCACACTA 58.589 61.111 0.00 0.00 0.00 2.74
2725 3647 1.700955 TAGTCTTCTACGGGCCATCC 58.299 55.000 4.39 0.00 0.00 3.51
2726 3648 4.705507 TCATATAGTCTTCTACGGGCCATC 59.294 45.833 4.39 0.00 0.00 3.51
2727 3649 4.673968 TCATATAGTCTTCTACGGGCCAT 58.326 43.478 4.39 0.00 0.00 4.40
2728 3650 4.108501 TCATATAGTCTTCTACGGGCCA 57.891 45.455 4.39 0.00 0.00 5.36
2729 3651 4.678309 GCATCATATAGTCTTCTACGGGCC 60.678 50.000 0.00 0.00 0.00 5.80
2730 3652 4.082190 TGCATCATATAGTCTTCTACGGGC 60.082 45.833 0.00 0.00 0.00 6.13
2731 3653 5.644977 TGCATCATATAGTCTTCTACGGG 57.355 43.478 0.00 0.00 0.00 5.28
2732 3654 7.814587 TGAATTGCATCATATAGTCTTCTACGG 59.185 37.037 0.00 0.00 0.00 4.02
2733 3655 8.748380 TGAATTGCATCATATAGTCTTCTACG 57.252 34.615 0.00 0.00 0.00 3.51
2745 3667 9.615295 CGATGAATACAATTGAATTGCATCATA 57.385 29.630 23.35 10.48 43.98 2.15
2746 3668 7.597369 CCGATGAATACAATTGAATTGCATCAT 59.403 33.333 22.46 22.46 43.98 2.45
2747 3669 6.919115 CCGATGAATACAATTGAATTGCATCA 59.081 34.615 23.35 20.57 43.98 3.07
2748 3670 7.140705 TCCGATGAATACAATTGAATTGCATC 58.859 34.615 17.19 17.85 43.98 3.91
2749 3671 7.041635 TCCGATGAATACAATTGAATTGCAT 57.958 32.000 17.19 12.05 43.98 3.96
2750 3672 6.095300 ACTCCGATGAATACAATTGAATTGCA 59.905 34.615 17.19 5.52 43.98 4.08
2751 3673 6.498304 ACTCCGATGAATACAATTGAATTGC 58.502 36.000 17.19 2.44 43.98 3.56
2752 3674 7.854422 CAGACTCCGATGAATACAATTGAATTG 59.146 37.037 15.82 15.82 45.59 2.32
2753 3675 7.554118 ACAGACTCCGATGAATACAATTGAATT 59.446 33.333 13.59 0.00 0.00 2.17
2754 3676 7.050377 ACAGACTCCGATGAATACAATTGAAT 58.950 34.615 13.59 0.00 0.00 2.57
2755 3677 6.406370 ACAGACTCCGATGAATACAATTGAA 58.594 36.000 13.59 0.00 0.00 2.69
2756 3678 5.977635 ACAGACTCCGATGAATACAATTGA 58.022 37.500 13.59 0.00 0.00 2.57
2757 3679 6.668541 AACAGACTCCGATGAATACAATTG 57.331 37.500 3.24 3.24 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.