Multiple sequence alignment - TraesCS1B01G359400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G359400 chr1B 100.000 6573 0 0 1 6573 588497068 588490496 0.000000e+00 12139.0
1 TraesCS1B01G359400 chr1B 76.601 812 159 20 963 1760 588354164 588353370 1.020000e-112 418.0
2 TraesCS1B01G359400 chr1B 96.667 210 6 1 1802 2011 34697325 34697117 1.360000e-91 348.0
3 TraesCS1B01G359400 chr1B 80.769 182 33 2 3944 4124 19050158 19050338 2.470000e-29 141.0
4 TraesCS1B01G359400 chr1B 86.598 97 11 2 3446 3541 19049611 19049706 9.010000e-19 106.0
5 TraesCS1B01G359400 chr1B 85.882 85 12 0 3453 3537 588298598 588298682 2.520000e-14 91.6
6 TraesCS1B01G359400 chr1B 92.500 40 3 0 6218 6257 584576570 584576609 2.560000e-04 58.4
7 TraesCS1B01G359400 chr1B 92.500 40 3 0 6218 6257 584621943 584621982 2.560000e-04 58.4
8 TraesCS1B01G359400 chr1D 93.966 3265 162 18 2553 5795 435160549 435157298 0.000000e+00 4905.0
9 TraesCS1B01G359400 chr1D 91.033 1026 71 17 796 1808 435163280 435162263 0.000000e+00 1365.0
10 TraesCS1B01G359400 chr1D 94.746 552 27 2 2002 2553 435162270 435161721 0.000000e+00 857.0
11 TraesCS1B01G359400 chr1D 89.846 325 24 4 3 326 435164684 435164368 6.140000e-110 409.0
12 TraesCS1B01G359400 chr1D 75.526 380 74 14 1354 1722 435145117 435145488 1.130000e-37 169.0
13 TraesCS1B01G359400 chr1D 79.459 185 36 2 3944 4127 13313013 13312830 5.350000e-26 130.0
14 TraesCS1B01G359400 chr1D 84.906 106 14 2 3440 3544 13313560 13313456 9.010000e-19 106.0
15 TraesCS1B01G359400 chr1D 87.059 85 11 0 3453 3537 13368496 13368412 5.430000e-16 97.1
16 TraesCS1B01G359400 chr1D 78.626 131 28 0 4789 4919 434244023 434244153 3.270000e-13 87.9
17 TraesCS1B01G359400 chr1D 84.706 85 13 0 3453 3537 14257431 14257347 1.170000e-12 86.1
18 TraesCS1B01G359400 chr1D 100.000 40 0 0 6430 6469 435155512 435155473 2.540000e-09 75.0
19 TraesCS1B01G359400 chr1D 91.111 45 4 0 1065 1109 14277309 14277265 1.980000e-05 62.1
20 TraesCS1B01G359400 chr1A 93.466 3214 183 17 2686 5878 532750536 532747329 0.000000e+00 4747.0
21 TraesCS1B01G359400 chr1A 89.505 1010 67 14 795 1781 532758542 532757549 0.000000e+00 1242.0
22 TraesCS1B01G359400 chr1A 80.839 1644 258 47 2873 4484 532772209 532770591 0.000000e+00 1238.0
23 TraesCS1B01G359400 chr1A 86.151 621 84 2 1138 1757 532774154 532773535 0.000000e+00 669.0
24 TraesCS1B01G359400 chr1A 76.733 808 151 28 970 1760 532640420 532639633 3.670000e-112 416.0
25 TraesCS1B01G359400 chr1A 100.000 197 0 0 1809 2005 6671690 6671494 1.350000e-96 364.0
26 TraesCS1B01G359400 chr1A 91.418 268 17 4 2382 2646 532750799 532750535 4.840000e-96 363.0
27 TraesCS1B01G359400 chr1A 84.637 358 49 5 2036 2391 532757514 532757161 1.050000e-92 351.0
28 TraesCS1B01G359400 chr1A 80.190 525 57 14 5941 6434 532747140 532746632 3.770000e-92 350.0
29 TraesCS1B01G359400 chr1A 91.724 145 9 1 6432 6573 532746597 532746453 1.450000e-46 198.0
30 TraesCS1B01G359400 chr1A 91.339 127 11 0 320 446 168552600 168552726 2.440000e-39 174.0
31 TraesCS1B01G359400 chr1A 73.563 348 71 19 3445 3774 14591495 14591151 5.390000e-21 113.0
32 TraesCS1B01G359400 chr1A 89.412 85 9 0 3453 3537 14605429 14605345 2.510000e-19 108.0
33 TraesCS1B01G359400 chr1A 83.636 110 17 1 4587 4696 532770411 532770303 1.170000e-17 102.0
34 TraesCS1B01G359400 chr3B 98.551 207 2 1 1799 2004 141816210 141816004 1.350000e-96 364.0
35 TraesCS1B01G359400 chr3B 92.623 122 9 0 327 448 449159926 449159805 6.770000e-40 176.0
36 TraesCS1B01G359400 chr3B 92.623 122 6 3 326 446 736305127 736305008 8.760000e-39 172.0
37 TraesCS1B01G359400 chr3B 95.349 43 2 0 6221 6263 363802246 363802288 1.180000e-07 69.4
38 TraesCS1B01G359400 chr4A 98.058 206 4 0 1801 2006 731617249 731617044 6.270000e-95 359.0
39 TraesCS1B01G359400 chr4A 92.000 125 6 4 323 446 548344183 548344062 8.760000e-39 172.0
40 TraesCS1B01G359400 chr7B 99.000 200 1 1 1807 2006 744140287 744140485 2.250000e-94 357.0
41 TraesCS1B01G359400 chr7B 95.455 44 2 0 6215 6258 399786827 399786784 3.290000e-08 71.3
42 TraesCS1B01G359400 chr7B 93.182 44 3 0 6215 6258 562092346 562092389 1.530000e-06 65.8
43 TraesCS1B01G359400 chr7B 91.304 46 4 0 6211 6256 247160243 247160198 5.500000e-06 63.9
44 TraesCS1B01G359400 chr7B 97.222 36 1 0 6221 6256 351427123 351427158 1.980000e-05 62.1
45 TraesCS1B01G359400 chr6B 98.049 205 4 0 1801 2005 714947631 714947835 2.250000e-94 357.0
46 TraesCS1B01G359400 chr6B 94.872 39 2 0 2664 2702 562529376 562529414 1.980000e-05 62.1
47 TraesCS1B01G359400 chr2B 99.000 200 1 1 1803 2001 47312869 47313068 2.250000e-94 357.0
48 TraesCS1B01G359400 chr2B 97.156 211 3 3 1803 2011 38073979 38073770 2.920000e-93 353.0
49 TraesCS1B01G359400 chr2B 91.304 46 4 0 6211 6256 567413555 567413600 5.500000e-06 63.9
50 TraesCS1B01G359400 chr2B 89.583 48 5 0 6211 6258 555722174 555722221 1.980000e-05 62.1
51 TraesCS1B01G359400 chr5B 97.129 209 4 2 1802 2009 8541845 8541638 1.050000e-92 351.0
52 TraesCS1B01G359400 chr5B 94.783 115 6 0 319 433 519183430 519183544 5.240000e-41 180.0
53 TraesCS1B01G359400 chr5B 97.222 36 1 0 6221 6256 301316917 301316952 1.980000e-05 62.1
54 TraesCS1B01G359400 chr6A 96.364 110 4 0 327 436 408886183 408886074 1.460000e-41 182.0
55 TraesCS1B01G359400 chr6A 96.364 110 4 0 324 433 596351418 596351527 1.460000e-41 182.0
56 TraesCS1B01G359400 chr5D 94.783 115 6 0 323 437 522142252 522142138 5.240000e-41 180.0
57 TraesCS1B01G359400 chr3D 93.443 122 7 1 323 443 434177617 434177496 5.240000e-41 180.0
58 TraesCS1B01G359400 chr3D 100.000 36 0 0 6221 6256 305839544 305839579 4.250000e-07 67.6
59 TraesCS1B01G359400 chr4D 95.789 95 4 0 2459 2553 263464089 263463995 3.170000e-33 154.0
60 TraesCS1B01G359400 chr6D 97.500 40 1 0 6221 6260 340945581 340945542 1.180000e-07 69.4
61 TraesCS1B01G359400 chr6D 89.583 48 5 0 6211 6258 309100868 309100915 1.980000e-05 62.1
62 TraesCS1B01G359400 chr6D 97.059 34 0 1 6220 6252 69086619 69086652 1.000000e-03 56.5
63 TraesCS1B01G359400 chr7D 100.000 36 0 0 6221 6256 165231012 165231047 4.250000e-07 67.6
64 TraesCS1B01G359400 chr4B 100.000 36 0 0 6221 6256 480194173 480194208 4.250000e-07 67.6
65 TraesCS1B01G359400 chr2D 97.368 38 1 0 6221 6258 126446904 126446941 1.530000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G359400 chr1B 588490496 588497068 6572 True 12139.000000 12139 100.0000 1 6573 1 chr1B.!!$R3 6572
1 TraesCS1B01G359400 chr1B 588353370 588354164 794 True 418.000000 418 76.6010 963 1760 1 chr1B.!!$R2 797
2 TraesCS1B01G359400 chr1D 435155473 435164684 9211 True 1522.200000 4905 93.9182 3 6469 5 chr1D.!!$R5 6466
3 TraesCS1B01G359400 chr1A 532746453 532750799 4346 True 1414.500000 4747 89.1995 2382 6573 4 chr1A.!!$R5 4191
4 TraesCS1B01G359400 chr1A 532757161 532758542 1381 True 796.500000 1242 87.0710 795 2391 2 chr1A.!!$R6 1596
5 TraesCS1B01G359400 chr1A 532770303 532774154 3851 True 669.666667 1238 83.5420 1138 4696 3 chr1A.!!$R7 3558
6 TraesCS1B01G359400 chr1A 532639633 532640420 787 True 416.000000 416 76.7330 970 1760 1 chr1A.!!$R4 790

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
342 343 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.0 13.34 13.34 0.00 4.55 F
709 1509 0.105593 TCATCAATGGCTCTCTCGGC 59.894 55.0 0.00 0.00 0.00 5.54 F
1881 2741 0.171455 ATAGCGTGCTATAGCGGAGC 59.829 55.0 22.98 22.98 45.83 4.70 F
1976 2836 0.171455 ATAGCGTGCTATAGCGGAGC 59.829 55.0 22.98 22.98 45.83 4.70 F
2112 2980 0.250513 GCTGACCCGAAAGAGTGGAT 59.749 55.0 0.00 0.00 0.00 3.41 F
2400 3274 0.324943 CTTGGGGTCGGTGTCATCTT 59.675 55.0 0.00 0.00 0.00 2.40 F
3493 5850 0.620556 TCAGTGGCTCAATTCCCTCC 59.379 55.0 0.00 0.00 0.00 4.30 F
5043 7499 0.174389 AGCGTACCATGCTCTGAGTG 59.826 55.0 6.53 0.00 34.99 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1862 2722 0.171455 GCTCCGCTATAGCACGCTAT 59.829 55.000 23.99 15.45 42.21 2.97 R
1957 2817 0.171455 GCTCCGCTATAGCACGCTAT 59.829 55.000 23.99 15.45 42.21 2.97 R
2968 5310 0.110104 GATCCTTGGAGGGATGCCAG 59.890 60.000 5.86 0.00 45.18 4.85 R
2974 5316 1.207791 GCTTCTGATCCTTGGAGGGA 58.792 55.000 0.00 0.00 39.95 4.20 R
3690 6048 1.384525 GCACCAACGTATATGGGCAA 58.615 50.000 9.49 0.00 42.48 4.52 R
4320 6689 3.502123 TTGAACCTGAACAAGTAGGGG 57.498 47.619 0.00 0.00 38.42 4.79 R
5205 7661 0.098200 GTTGCCTTTCGATAACCGCC 59.902 55.000 0.00 0.00 38.37 6.13 R
6527 10453 0.034960 TTATTAGTGCGGCCTTGGCA 60.035 50.000 14.04 0.00 38.25 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 5.711976 ACAGTTCTTAATTCCCAATGTGGAG 59.288 40.000 0.00 0.00 40.96 3.86
30 31 5.945784 CAGTTCTTAATTCCCAATGTGGAGA 59.054 40.000 0.00 0.00 40.96 3.71
40 41 4.079844 TCCCAATGTGGAGAGCATGATTAA 60.080 41.667 0.00 0.00 40.96 1.40
133 134 7.770433 TGTCAGAGTGTTGGATGGATATTTTAG 59.230 37.037 0.00 0.00 0.00 1.85
140 141 7.339466 GTGTTGGATGGATATTTTAGTTCCAGT 59.661 37.037 0.00 0.00 42.53 4.00
144 145 7.996644 TGGATGGATATTTTAGTTCCAGTAACC 59.003 37.037 0.00 0.00 42.53 2.85
151 152 9.901172 ATATTTTAGTTCCAGTAACCGATTCTT 57.099 29.630 0.00 0.00 39.03 2.52
153 154 8.538409 TTTTAGTTCCAGTAACCGATTCTTAC 57.462 34.615 0.00 0.00 39.03 2.34
183 184 3.498927 AATTCTTTCTGCCGCAAGATG 57.501 42.857 0.00 0.00 43.02 2.90
185 186 0.036732 TCTTTCTGCCGCAAGATGGT 59.963 50.000 0.00 0.00 43.02 3.55
214 215 4.754411 AGGGGATGCAAGGATGATAATT 57.246 40.909 0.00 0.00 0.00 1.40
216 217 3.766051 GGGGATGCAAGGATGATAATTCC 59.234 47.826 0.00 0.00 0.00 3.01
222 223 7.147949 GGATGCAAGGATGATAATTCCCTAATG 60.148 40.741 0.00 0.00 33.45 1.90
256 257 7.286087 AGTCCTGCATTTGAAATCATAGCATAA 59.714 33.333 1.84 0.00 30.76 1.90
257 258 7.594015 GTCCTGCATTTGAAATCATAGCATAAG 59.406 37.037 1.84 0.00 30.76 1.73
281 282 7.721402 AGAGATTTGATGTAGATGACCAGTAC 58.279 38.462 0.00 0.00 0.00 2.73
289 290 6.911250 TGTAGATGACCAGTACTTTCTTGA 57.089 37.500 0.00 0.00 0.00 3.02
300 301 7.025963 CCAGTACTTTCTTGAGATGCAAATTC 58.974 38.462 0.00 0.00 35.74 2.17
315 316 2.403252 AATTCCTTGGACACCTAGCG 57.597 50.000 0.00 0.00 0.00 4.26
317 318 2.125106 CCTTGGACACCTAGCGCC 60.125 66.667 2.29 0.00 0.00 6.53
322 323 1.200519 TGGACACCTAGCGCCTTATT 58.799 50.000 2.29 0.00 0.00 1.40
326 327 3.244112 GGACACCTAGCGCCTTATTATGT 60.244 47.826 2.29 0.00 0.00 2.29
327 328 4.021719 GGACACCTAGCGCCTTATTATGTA 60.022 45.833 2.29 0.00 0.00 2.29
328 329 4.879598 ACACCTAGCGCCTTATTATGTAC 58.120 43.478 2.29 0.00 0.00 2.90
329 330 4.587684 ACACCTAGCGCCTTATTATGTACT 59.412 41.667 2.29 0.00 0.00 2.73
330 331 5.162075 CACCTAGCGCCTTATTATGTACTC 58.838 45.833 2.29 0.00 0.00 2.59
331 332 4.220163 ACCTAGCGCCTTATTATGTACTCC 59.780 45.833 2.29 0.00 0.00 3.85
332 333 3.679824 AGCGCCTTATTATGTACTCCC 57.320 47.619 2.29 0.00 0.00 4.30
333 334 3.240302 AGCGCCTTATTATGTACTCCCT 58.760 45.455 2.29 0.00 0.00 4.20
334 335 3.258622 AGCGCCTTATTATGTACTCCCTC 59.741 47.826 2.29 0.00 0.00 4.30
335 336 3.616802 GCGCCTTATTATGTACTCCCTCC 60.617 52.174 0.00 0.00 0.00 4.30
336 337 3.367087 CGCCTTATTATGTACTCCCTCCG 60.367 52.174 0.00 0.00 0.00 4.63
337 338 3.577415 GCCTTATTATGTACTCCCTCCGT 59.423 47.826 0.00 0.00 0.00 4.69
338 339 4.040095 GCCTTATTATGTACTCCCTCCGTT 59.960 45.833 0.00 0.00 0.00 4.44
339 340 5.780984 CCTTATTATGTACTCCCTCCGTTC 58.219 45.833 0.00 0.00 0.00 3.95
340 341 5.443185 TTATTATGTACTCCCTCCGTTCG 57.557 43.478 0.00 0.00 0.00 3.95
341 342 1.683943 TATGTACTCCCTCCGTTCGG 58.316 55.000 4.74 4.74 0.00 4.30
342 343 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
343 344 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
344 345 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
345 346 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
346 347 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
347 348 2.395619 ACTCCCTCCGTTCGGAATTAT 58.604 47.619 14.79 0.00 33.41 1.28
348 349 2.770232 ACTCCCTCCGTTCGGAATTATT 59.230 45.455 14.79 0.00 33.41 1.40
349 350 3.199289 ACTCCCTCCGTTCGGAATTATTT 59.801 43.478 14.79 0.00 33.41 1.40
350 351 3.537580 TCCCTCCGTTCGGAATTATTTG 58.462 45.455 14.79 1.97 33.41 2.32
351 352 3.054948 TCCCTCCGTTCGGAATTATTTGT 60.055 43.478 14.79 0.00 33.41 2.83
352 353 3.311596 CCCTCCGTTCGGAATTATTTGTC 59.688 47.826 14.79 0.00 33.41 3.18
353 354 3.000925 CCTCCGTTCGGAATTATTTGTCG 59.999 47.826 14.79 0.00 33.41 4.35
354 355 2.349275 TCCGTTCGGAATTATTTGTCGC 59.651 45.455 11.66 0.00 0.00 5.19
355 356 2.094575 CCGTTCGGAATTATTTGTCGCA 59.905 45.455 5.19 0.00 0.00 5.10
356 357 3.342269 CGTTCGGAATTATTTGTCGCAG 58.658 45.455 0.00 0.00 0.00 5.18
357 358 3.061563 CGTTCGGAATTATTTGTCGCAGA 59.938 43.478 0.00 0.00 0.00 4.26
358 359 4.434989 CGTTCGGAATTATTTGTCGCAGAA 60.435 41.667 0.00 0.00 39.69 3.02
359 360 5.387279 GTTCGGAATTATTTGTCGCAGAAA 58.613 37.500 0.00 0.00 39.69 2.52
360 361 5.811399 TCGGAATTATTTGTCGCAGAAAT 57.189 34.783 0.00 0.00 39.69 2.17
361 362 6.912203 TCGGAATTATTTGTCGCAGAAATA 57.088 33.333 0.00 0.00 39.69 1.40
362 363 6.943981 TCGGAATTATTTGTCGCAGAAATAG 58.056 36.000 0.00 0.00 39.69 1.73
363 364 6.759356 TCGGAATTATTTGTCGCAGAAATAGA 59.241 34.615 0.00 0.00 39.69 1.98
364 365 7.441157 TCGGAATTATTTGTCGCAGAAATAGAT 59.559 33.333 0.00 0.00 39.69 1.98
365 366 7.531871 CGGAATTATTTGTCGCAGAAATAGATG 59.468 37.037 0.00 0.00 39.69 2.90
366 367 8.345565 GGAATTATTTGTCGCAGAAATAGATGT 58.654 33.333 0.00 0.00 39.69 3.06
370 371 9.764363 TTATTTGTCGCAGAAATAGATGTATCT 57.236 29.630 0.00 0.00 39.69 1.98
372 373 8.803201 TTTGTCGCAGAAATAGATGTATCTAG 57.197 34.615 7.57 0.00 39.84 2.43
373 374 7.745620 TGTCGCAGAAATAGATGTATCTAGA 57.254 36.000 7.57 0.00 39.84 2.43
374 375 7.585867 TGTCGCAGAAATAGATGTATCTAGAC 58.414 38.462 0.00 7.60 39.84 2.59
375 376 7.445707 TGTCGCAGAAATAGATGTATCTAGACT 59.554 37.037 0.00 4.40 39.84 3.24
376 377 8.293867 GTCGCAGAAATAGATGTATCTAGACTT 58.706 37.037 0.00 1.94 39.84 3.01
377 378 9.503399 TCGCAGAAATAGATGTATCTAGACTTA 57.497 33.333 0.00 0.00 42.20 2.24
406 407 9.967346 TTAGTTCTAGATACATCCATTTTCGAG 57.033 33.333 0.00 0.00 0.00 4.04
407 408 8.239038 AGTTCTAGATACATCCATTTTCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
408 409 8.138712 AGTTCTAGATACATCCATTTTCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
409 410 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
410 411 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
411 412 8.642432 TCTAGATACATCCATTTTCGAGACAAT 58.358 33.333 0.00 0.00 0.00 2.71
412 413 9.265901 CTAGATACATCCATTTTCGAGACAATT 57.734 33.333 0.00 0.00 0.00 2.32
414 415 9.613428 AGATACATCCATTTTCGAGACAATTAA 57.387 29.630 0.00 0.00 0.00 1.40
418 419 8.190784 ACATCCATTTTCGAGACAATTAATTCC 58.809 33.333 0.00 0.00 0.00 3.01
419 420 6.781138 TCCATTTTCGAGACAATTAATTCCG 58.219 36.000 0.00 0.74 0.00 4.30
420 421 6.596106 TCCATTTTCGAGACAATTAATTCCGA 59.404 34.615 0.00 3.04 0.00 4.55
421 422 7.119992 TCCATTTTCGAGACAATTAATTCCGAA 59.880 33.333 14.72 14.72 33.57 4.30
422 423 7.218204 CCATTTTCGAGACAATTAATTCCGAAC 59.782 37.037 16.78 3.03 34.86 3.95
423 424 5.444586 TTCGAGACAATTAATTCCGAACG 57.555 39.130 14.72 10.35 30.98 3.95
424 425 3.861113 TCGAGACAATTAATTCCGAACGG 59.139 43.478 6.94 6.94 0.00 4.44
425 426 3.861113 CGAGACAATTAATTCCGAACGGA 59.139 43.478 12.04 12.04 43.52 4.69
426 427 4.026804 CGAGACAATTAATTCCGAACGGAG 60.027 45.833 15.34 5.60 46.06 4.63
427 428 4.189231 AGACAATTAATTCCGAACGGAGG 58.811 43.478 15.34 4.52 46.06 4.30
428 429 3.275999 ACAATTAATTCCGAACGGAGGG 58.724 45.455 15.34 5.11 46.06 4.30
429 430 3.054948 ACAATTAATTCCGAACGGAGGGA 60.055 43.478 15.34 2.49 46.06 4.20
430 431 2.973694 TTAATTCCGAACGGAGGGAG 57.026 50.000 15.34 0.00 46.06 4.30
431 432 1.856629 TAATTCCGAACGGAGGGAGT 58.143 50.000 15.34 4.12 46.06 3.85
452 453 7.387643 GGAGTATCAGTTTTAGGACCATATCC 58.612 42.308 0.00 0.00 42.94 2.59
505 506 1.583495 GGGTTTACGGGAGCTGTTGC 61.583 60.000 0.00 0.00 40.05 4.17
507 508 0.517316 GTTTACGGGAGCTGTTGCAG 59.483 55.000 0.00 0.00 42.74 4.41
509 510 1.764571 TTACGGGAGCTGTTGCAGGT 61.765 55.000 0.00 0.11 45.28 4.00
510 511 1.764571 TACGGGAGCTGTTGCAGGTT 61.765 55.000 0.00 0.00 42.53 3.50
513 514 0.315251 GGGAGCTGTTGCAGGTTTTC 59.685 55.000 0.00 0.00 42.53 2.29
515 516 2.504367 GGAGCTGTTGCAGGTTTTCTA 58.496 47.619 0.00 0.00 42.53 2.10
517 518 3.119708 GGAGCTGTTGCAGGTTTTCTATG 60.120 47.826 0.00 0.00 42.53 2.23
518 519 2.229784 AGCTGTTGCAGGTTTTCTATGC 59.770 45.455 0.00 0.00 39.27 3.14
519 520 2.855180 CTGTTGCAGGTTTTCTATGCG 58.145 47.619 0.00 0.00 42.92 4.73
522 523 2.394930 TGCAGGTTTTCTATGCGCTA 57.605 45.000 9.73 0.00 42.92 4.26
523 524 2.279741 TGCAGGTTTTCTATGCGCTAG 58.720 47.619 9.73 8.24 42.92 3.42
524 525 2.280628 GCAGGTTTTCTATGCGCTAGT 58.719 47.619 9.73 0.00 0.00 2.57
525 526 2.030946 GCAGGTTTTCTATGCGCTAGTG 59.969 50.000 9.73 0.00 0.00 2.74
526 527 2.609459 CAGGTTTTCTATGCGCTAGTGG 59.391 50.000 9.73 0.00 0.00 4.00
527 528 1.940613 GGTTTTCTATGCGCTAGTGGG 59.059 52.381 9.73 0.00 0.00 4.61
537 1293 2.695314 GCTAGTGGGCGGATTTCTG 58.305 57.895 0.00 0.00 0.00 3.02
552 1308 5.174035 CGGATTTCTGCTAGTACTGAATTCG 59.826 44.000 5.39 3.48 32.84 3.34
555 1311 8.082852 GGATTTCTGCTAGTACTGAATTCGATA 58.917 37.037 5.39 0.00 32.84 2.92
556 1312 8.804688 ATTTCTGCTAGTACTGAATTCGATAC 57.195 34.615 5.39 9.76 0.00 2.24
561 1317 2.615447 AGTACTGAATTCGATACGCGGA 59.385 45.455 12.47 0.00 41.33 5.54
563 1319 1.404391 ACTGAATTCGATACGCGGACT 59.596 47.619 12.47 0.00 41.33 3.85
584 1340 6.815142 GGACTTGTAGTATCGTTGGTTACAAT 59.185 38.462 0.00 0.00 39.13 2.71
597 1353 6.237648 CGTTGGTTACAATCAGTACCGTATTC 60.238 42.308 0.00 0.00 39.13 1.75
602 1358 7.254319 GGTTACAATCAGTACCGTATTCATGTG 60.254 40.741 0.00 0.00 30.91 3.21
603 1359 5.730550 ACAATCAGTACCGTATTCATGTGT 58.269 37.500 0.00 0.00 0.00 3.72
604 1360 6.869695 ACAATCAGTACCGTATTCATGTGTA 58.130 36.000 0.00 0.00 0.00 2.90
605 1361 6.755141 ACAATCAGTACCGTATTCATGTGTAC 59.245 38.462 0.00 0.00 33.64 2.90
607 1363 4.705991 TCAGTACCGTATTCATGTGTACCA 59.294 41.667 0.00 0.00 33.87 3.25
609 1365 4.708421 AGTACCGTATTCATGTGTACCACT 59.292 41.667 0.00 0.00 35.11 4.00
611 1367 5.002464 ACCGTATTCATGTGTACCACTAC 57.998 43.478 0.00 0.00 35.11 2.73
612 1368 4.463539 ACCGTATTCATGTGTACCACTACA 59.536 41.667 0.00 0.00 35.11 2.74
670 1470 7.955864 GGTACAACTACGCTAGAATTTCTTTTG 59.044 37.037 3.86 0.00 0.00 2.44
673 1473 3.471495 ACGCTAGAATTTCTTTTGGCG 57.529 42.857 21.86 21.86 45.49 5.69
674 1474 3.471495 CGCTAGAATTTCTTTTGGCGT 57.529 42.857 18.43 0.00 37.21 5.68
675 1475 3.163594 CGCTAGAATTTCTTTTGGCGTG 58.836 45.455 18.43 3.15 37.21 5.34
676 1476 3.501950 GCTAGAATTTCTTTTGGCGTGG 58.498 45.455 3.86 0.00 0.00 4.94
677 1477 2.438868 AGAATTTCTTTTGGCGTGGC 57.561 45.000 0.00 0.00 0.00 5.01
678 1478 1.686052 AGAATTTCTTTTGGCGTGGCA 59.314 42.857 0.00 0.00 0.00 4.92
679 1479 2.299867 AGAATTTCTTTTGGCGTGGCAT 59.700 40.909 0.00 0.00 0.00 4.40
680 1480 2.368655 ATTTCTTTTGGCGTGGCATC 57.631 45.000 0.00 0.00 0.00 3.91
681 1481 1.035923 TTTCTTTTGGCGTGGCATCA 58.964 45.000 0.00 0.00 0.00 3.07
682 1482 1.035923 TTCTTTTGGCGTGGCATCAA 58.964 45.000 0.00 0.00 0.00 2.57
683 1483 1.255882 TCTTTTGGCGTGGCATCAAT 58.744 45.000 0.00 0.00 0.00 2.57
686 1486 1.184431 TTTGGCGTGGCATCAATCAT 58.816 45.000 0.00 0.00 0.00 2.45
688 1488 0.394080 TGGCGTGGCATCAATCATCA 60.394 50.000 0.00 0.00 0.00 3.07
689 1489 0.740149 GGCGTGGCATCAATCATCAA 59.260 50.000 0.00 0.00 0.00 2.57
690 1490 1.338973 GGCGTGGCATCAATCATCAAT 59.661 47.619 0.00 0.00 0.00 2.57
691 1491 2.606308 GGCGTGGCATCAATCATCAATC 60.606 50.000 0.00 0.00 0.00 2.67
692 1492 2.033675 GCGTGGCATCAATCATCAATCA 59.966 45.455 0.00 0.00 0.00 2.57
693 1493 3.305131 GCGTGGCATCAATCATCAATCAT 60.305 43.478 0.00 0.00 0.00 2.45
694 1494 4.473199 CGTGGCATCAATCATCAATCATC 58.527 43.478 0.00 0.00 0.00 2.92
695 1495 4.023536 CGTGGCATCAATCATCAATCATCA 60.024 41.667 0.00 0.00 0.00 3.07
696 1496 5.506649 CGTGGCATCAATCATCAATCATCAA 60.507 40.000 0.00 0.00 0.00 2.57
697 1497 6.455647 GTGGCATCAATCATCAATCATCAAT 58.544 36.000 0.00 0.00 0.00 2.57
698 1498 6.366061 GTGGCATCAATCATCAATCATCAATG 59.634 38.462 0.00 0.00 0.00 2.82
699 1499 5.869344 GGCATCAATCATCAATCATCAATGG 59.131 40.000 0.00 0.00 0.00 3.16
700 1500 5.348724 GCATCAATCATCAATCATCAATGGC 59.651 40.000 0.00 0.00 0.00 4.40
701 1501 6.691508 CATCAATCATCAATCATCAATGGCT 58.308 36.000 0.00 0.00 0.00 4.75
702 1502 6.327279 TCAATCATCAATCATCAATGGCTC 57.673 37.500 0.00 0.00 0.00 4.70
703 1503 6.068670 TCAATCATCAATCATCAATGGCTCT 58.931 36.000 0.00 0.00 0.00 4.09
704 1504 6.206829 TCAATCATCAATCATCAATGGCTCTC 59.793 38.462 0.00 0.00 0.00 3.20
705 1505 5.306114 TCATCAATCATCAATGGCTCTCT 57.694 39.130 0.00 0.00 0.00 3.10
706 1506 5.306394 TCATCAATCATCAATGGCTCTCTC 58.694 41.667 0.00 0.00 0.00 3.20
707 1507 3.725490 TCAATCATCAATGGCTCTCTCG 58.275 45.455 0.00 0.00 0.00 4.04
708 1508 2.806818 CAATCATCAATGGCTCTCTCGG 59.193 50.000 0.00 0.00 0.00 4.63
709 1509 0.105593 TCATCAATGGCTCTCTCGGC 59.894 55.000 0.00 0.00 0.00 5.54
710 1510 0.179065 CATCAATGGCTCTCTCGGCA 60.179 55.000 0.00 0.00 43.95 5.69
711 1511 0.543277 ATCAATGGCTCTCTCGGCAA 59.457 50.000 0.00 0.00 43.02 4.52
712 1512 0.391661 TCAATGGCTCTCTCGGCAAC 60.392 55.000 0.00 0.00 43.02 4.17
713 1513 1.078143 AATGGCTCTCTCGGCAACC 60.078 57.895 0.00 0.00 43.02 3.77
714 1514 2.543067 AATGGCTCTCTCGGCAACCC 62.543 60.000 0.00 0.00 43.02 4.11
715 1515 3.394836 GGCTCTCTCGGCAACCCT 61.395 66.667 0.00 0.00 0.00 4.34
716 1516 2.665603 GCTCTCTCGGCAACCCTT 59.334 61.111 0.00 0.00 0.00 3.95
719 1519 1.535444 TCTCTCGGCAACCCTTCCA 60.535 57.895 0.00 0.00 0.00 3.53
727 1527 0.320683 GCAACCCTTCCATGCAAACC 60.321 55.000 0.00 0.00 39.81 3.27
746 1546 0.455295 CTCCTCTTGCGTCGTCAGAC 60.455 60.000 0.00 0.00 43.72 3.51
756 1556 2.455295 GTCGTCAGACGTACAGATCC 57.545 55.000 22.16 0.00 43.14 3.36
757 1557 1.736126 GTCGTCAGACGTACAGATCCA 59.264 52.381 22.16 0.00 43.14 3.41
758 1558 2.355132 GTCGTCAGACGTACAGATCCAT 59.645 50.000 22.16 0.00 43.14 3.41
759 1559 2.354821 TCGTCAGACGTACAGATCCATG 59.645 50.000 22.16 0.00 43.14 3.66
760 1560 2.464865 GTCAGACGTACAGATCCATGC 58.535 52.381 0.00 0.00 0.00 4.06
761 1561 2.099405 TCAGACGTACAGATCCATGCA 58.901 47.619 0.00 0.00 0.00 3.96
762 1562 2.099756 TCAGACGTACAGATCCATGCAG 59.900 50.000 0.00 0.00 0.00 4.41
763 1563 1.410517 AGACGTACAGATCCATGCAGG 59.589 52.381 0.00 0.00 39.47 4.85
764 1564 0.179073 ACGTACAGATCCATGCAGGC 60.179 55.000 0.00 0.00 37.29 4.85
765 1565 0.882042 CGTACAGATCCATGCAGGCC 60.882 60.000 0.00 0.00 37.29 5.19
766 1566 0.882042 GTACAGATCCATGCAGGCCG 60.882 60.000 0.00 0.00 37.29 6.13
767 1567 1.337384 TACAGATCCATGCAGGCCGT 61.337 55.000 0.00 0.00 37.29 5.68
768 1568 2.184830 CAGATCCATGCAGGCCGTG 61.185 63.158 0.00 0.00 37.29 4.94
769 1569 2.124570 GATCCATGCAGGCCGTGT 60.125 61.111 0.00 0.00 37.29 4.49
770 1570 2.438975 ATCCATGCAGGCCGTGTG 60.439 61.111 0.00 0.00 37.29 3.82
773 1573 4.111016 CATGCAGGCCGTGTGCTG 62.111 66.667 15.70 8.31 41.78 4.41
777 1577 4.624364 CAGGCCGTGTGCTGGACA 62.624 66.667 0.00 0.00 36.77 4.02
791 1591 0.248565 TGGACACAGAGATGAGCAGC 59.751 55.000 0.00 0.00 0.00 5.25
792 1592 0.536260 GGACACAGAGATGAGCAGCT 59.464 55.000 0.00 0.00 0.00 4.24
793 1593 1.642728 GACACAGAGATGAGCAGCTG 58.357 55.000 10.11 10.11 34.65 4.24
878 1685 1.804748 GACCGAGTTGGCTTTGTTAGG 59.195 52.381 0.00 0.00 43.94 2.69
925 1733 5.357257 AGTTAGTTTACGTCTGGGCATATG 58.643 41.667 0.00 0.00 0.00 1.78
984 1792 1.664151 GCATGTTACGCTCCACTAACC 59.336 52.381 0.00 0.00 0.00 2.85
1165 1998 5.758296 CCATTAACGGCTTCATGTATGTACT 59.242 40.000 0.00 0.00 0.00 2.73
1166 1999 6.260050 CCATTAACGGCTTCATGTATGTACTT 59.740 38.462 0.00 0.00 0.00 2.24
1167 2000 7.439955 CCATTAACGGCTTCATGTATGTACTTA 59.560 37.037 0.00 0.00 0.00 2.24
1168 2001 7.760131 TTAACGGCTTCATGTATGTACTTAC 57.240 36.000 11.09 11.09 0.00 2.34
1169 2002 4.357142 ACGGCTTCATGTATGTACTTACG 58.643 43.478 12.70 3.08 0.00 3.18
1170 2003 4.142315 ACGGCTTCATGTATGTACTTACGT 60.142 41.667 12.70 10.25 0.00 3.57
1171 2004 5.066375 ACGGCTTCATGTATGTACTTACGTA 59.934 40.000 12.00 0.00 0.00 3.57
1172 2005 5.397534 CGGCTTCATGTATGTACTTACGTAC 59.602 44.000 12.00 10.62 44.80 3.67
1173 2006 5.689068 GGCTTCATGTATGTACTTACGTACC 59.311 44.000 12.00 8.66 44.25 3.34
1174 2007 5.397534 GCTTCATGTATGTACTTACGTACCG 59.602 44.000 12.00 7.33 44.25 4.02
1175 2008 6.435430 TTCATGTATGTACTTACGTACCGT 57.565 37.500 12.00 0.00 44.25 4.83
1176 2009 5.809464 TCATGTATGTACTTACGTACCGTG 58.191 41.667 12.00 12.45 44.25 4.94
1177 2010 4.014847 TGTATGTACTTACGTACCGTGC 57.985 45.455 13.73 0.00 44.25 5.34
1178 2011 3.438434 TGTATGTACTTACGTACCGTGCA 59.562 43.478 14.31 14.31 44.25 4.57
1179 2012 3.574284 ATGTACTTACGTACCGTGCAA 57.426 42.857 15.41 4.13 44.27 4.08
1267 2117 2.814919 CAAGCTATCCTACGTCTCCGAT 59.185 50.000 0.00 0.00 37.88 4.18
1312 2162 0.598065 GCGCCAACCAAAACATCTCT 59.402 50.000 0.00 0.00 0.00 3.10
1411 2267 2.361357 CTCCGGTCCCTCGTGTCT 60.361 66.667 0.00 0.00 0.00 3.41
1432 2288 1.672030 TCGCAAGTACCTCGTCCGA 60.672 57.895 0.00 0.00 39.48 4.55
1444 2300 1.226859 CGTCCGAGCGGCATTCTTA 60.227 57.895 1.45 0.00 34.68 2.10
1606 2462 1.056700 AGGTCTGCCTGGTGAACACT 61.057 55.000 8.98 0.22 45.05 3.55
1699 2559 3.011517 ATGCAGGGCCTCGTCCTT 61.012 61.111 0.95 0.00 34.19 3.36
1741 2601 1.296715 GGCAGACCTGACCGACATT 59.703 57.895 0.47 0.00 30.68 2.71
1764 2624 4.081642 TGTTAGGTGAGGAAAAGATCTCGG 60.082 45.833 0.00 0.00 33.00 4.63
1792 2652 8.575649 TGTTTAATTCCCTCCTGTCTATTTTC 57.424 34.615 0.00 0.00 0.00 2.29
1794 2654 8.894731 GTTTAATTCCCTCCTGTCTATTTTCTC 58.105 37.037 0.00 0.00 0.00 2.87
1796 2656 6.899892 ATTCCCTCCTGTCTATTTTCTCTT 57.100 37.500 0.00 0.00 0.00 2.85
1798 2658 5.342017 TCCCTCCTGTCTATTTTCTCTTCA 58.658 41.667 0.00 0.00 0.00 3.02
1806 2666 9.273016 CCTGTCTATTTTCTCTTCAAGTTTACA 57.727 33.333 0.00 0.00 0.00 2.41
1825 2685 9.124807 AGTTTACATCAAAGTTTTAAATAGCGC 57.875 29.630 0.00 0.00 0.00 5.92
1827 2687 4.557301 ACATCAAAGTTTTAAATAGCGCGC 59.443 37.500 26.66 26.66 0.00 6.86
1828 2688 4.413495 TCAAAGTTTTAAATAGCGCGCT 57.587 36.364 38.01 38.01 0.00 5.92
1829 2689 5.533533 TCAAAGTTTTAAATAGCGCGCTA 57.466 34.783 39.72 39.72 0.00 4.26
1830 2690 5.929278 TCAAAGTTTTAAATAGCGCGCTAA 58.071 33.333 40.90 26.03 31.73 3.09
1832 2692 3.936661 AGTTTTAAATAGCGCGCTAAGC 58.063 40.909 40.90 27.92 43.95 3.09
1845 2705 1.132588 GCTAAGCATCTTAGCGTCGG 58.867 55.000 18.95 0.00 38.12 4.79
1846 2706 1.269102 GCTAAGCATCTTAGCGTCGGA 60.269 52.381 18.95 0.00 38.12 4.55
1847 2707 2.386249 CTAAGCATCTTAGCGTCGGAC 58.614 52.381 0.00 0.00 40.15 4.79
1848 2708 0.179108 AAGCATCTTAGCGTCGGACC 60.179 55.000 1.91 0.00 40.15 4.46
1849 2709 1.038130 AGCATCTTAGCGTCGGACCT 61.038 55.000 1.91 3.67 40.15 3.85
1850 2710 0.595310 GCATCTTAGCGTCGGACCTC 60.595 60.000 1.91 0.00 0.00 3.85
1851 2711 1.025812 CATCTTAGCGTCGGACCTCT 58.974 55.000 1.91 2.89 0.00 3.69
1852 2712 1.405821 CATCTTAGCGTCGGACCTCTT 59.594 52.381 1.91 0.00 0.00 2.85
1853 2713 1.542492 TCTTAGCGTCGGACCTCTTT 58.458 50.000 1.91 0.00 0.00 2.52
1854 2714 1.471684 TCTTAGCGTCGGACCTCTTTC 59.528 52.381 1.91 0.00 0.00 2.62
1855 2715 1.201647 CTTAGCGTCGGACCTCTTTCA 59.798 52.381 1.91 0.00 0.00 2.69
1856 2716 1.250328 TAGCGTCGGACCTCTTTCAA 58.750 50.000 1.91 0.00 0.00 2.69
1857 2717 0.391597 AGCGTCGGACCTCTTTCAAA 59.608 50.000 1.91 0.00 0.00 2.69
1858 2718 1.002087 AGCGTCGGACCTCTTTCAAAT 59.998 47.619 1.91 0.00 0.00 2.32
1859 2719 1.128692 GCGTCGGACCTCTTTCAAATG 59.871 52.381 1.91 0.00 0.00 2.32
1860 2720 1.128692 CGTCGGACCTCTTTCAAATGC 59.871 52.381 1.91 0.00 0.00 3.56
1861 2721 2.427506 GTCGGACCTCTTTCAAATGCT 58.572 47.619 0.00 0.00 0.00 3.79
1862 2722 3.596214 GTCGGACCTCTTTCAAATGCTA 58.404 45.455 0.00 0.00 0.00 3.49
1863 2723 4.192317 GTCGGACCTCTTTCAAATGCTAT 58.808 43.478 0.00 0.00 0.00 2.97
1864 2724 5.357257 GTCGGACCTCTTTCAAATGCTATA 58.643 41.667 0.00 0.00 0.00 1.31
1865 2725 5.463724 GTCGGACCTCTTTCAAATGCTATAG 59.536 44.000 0.00 0.00 0.00 1.31
1866 2726 4.212214 CGGACCTCTTTCAAATGCTATAGC 59.788 45.833 18.18 18.18 42.50 2.97
1867 2727 4.212214 GGACCTCTTTCAAATGCTATAGCG 59.788 45.833 19.55 5.67 45.83 4.26
1868 2728 4.770795 ACCTCTTTCAAATGCTATAGCGT 58.229 39.130 19.55 16.84 45.83 5.07
1869 2729 4.572389 ACCTCTTTCAAATGCTATAGCGTG 59.428 41.667 20.02 16.47 45.83 5.34
1870 2730 4.521943 CTCTTTCAAATGCTATAGCGTGC 58.478 43.478 20.02 0.00 45.83 5.34
1871 2731 4.191544 TCTTTCAAATGCTATAGCGTGCT 58.808 39.130 20.02 7.98 45.83 4.40
1872 2732 5.356426 TCTTTCAAATGCTATAGCGTGCTA 58.644 37.500 20.02 3.73 45.83 3.49
1873 2733 5.991606 TCTTTCAAATGCTATAGCGTGCTAT 59.008 36.000 20.02 17.65 45.83 2.97
1874 2734 7.151976 TCTTTCAAATGCTATAGCGTGCTATA 58.848 34.615 20.02 17.96 45.83 1.31
1880 2740 3.326733 CTATAGCGTGCTATAGCGGAG 57.673 52.381 27.04 13.65 46.26 4.63
1881 2741 0.171455 ATAGCGTGCTATAGCGGAGC 59.829 55.000 22.98 22.98 45.83 4.70
1903 2763 5.618561 GCTATAGCGCGCTATTTAAAATGT 58.381 37.500 46.76 28.88 39.65 2.71
1904 2764 6.077838 GCTATAGCGCGCTATTTAAAATGTT 58.922 36.000 46.76 28.22 39.65 2.71
1905 2765 6.577427 GCTATAGCGCGCTATTTAAAATGTTT 59.423 34.615 46.76 27.75 39.65 2.83
1906 2766 6.732181 ATAGCGCGCTATTTAAAATGTTTG 57.268 33.333 40.32 0.00 35.92 2.93
1907 2767 4.481463 AGCGCGCTATTTAAAATGTTTGT 58.519 34.783 35.79 0.63 0.00 2.83
1908 2768 4.920927 AGCGCGCTATTTAAAATGTTTGTT 59.079 33.333 35.79 0.18 0.00 2.83
1909 2769 5.060446 AGCGCGCTATTTAAAATGTTTGTTC 59.940 36.000 35.79 0.00 0.00 3.18
1910 2770 5.164138 GCGCGCTATTTAAAATGTTTGTTCA 60.164 36.000 26.67 0.00 0.00 3.18
1911 2771 6.453659 GCGCGCTATTTAAAATGTTTGTTCAT 60.454 34.615 26.67 0.00 0.00 2.57
1912 2772 7.444245 CGCGCTATTTAAAATGTTTGTTCATT 58.556 30.769 5.56 0.00 39.35 2.57
1913 2773 7.949428 CGCGCTATTTAAAATGTTTGTTCATTT 59.051 29.630 5.56 0.00 45.94 2.32
1914 2774 9.039500 GCGCTATTTAAAATGTTTGTTCATTTG 57.961 29.630 0.00 0.00 44.10 2.32
1922 2782 6.676237 AATGTTTGTTCATTTGTTTGGACC 57.324 33.333 0.00 0.00 34.86 4.46
1923 2783 5.152623 TGTTTGTTCATTTGTTTGGACCA 57.847 34.783 0.00 0.00 0.00 4.02
1924 2784 5.551233 TGTTTGTTCATTTGTTTGGACCAA 58.449 33.333 1.69 1.69 0.00 3.67
1925 2785 5.997746 TGTTTGTTCATTTGTTTGGACCAAA 59.002 32.000 15.89 15.89 36.34 3.28
1926 2786 6.148480 TGTTTGTTCATTTGTTTGGACCAAAG 59.852 34.615 20.14 8.25 35.45 2.77
1927 2787 5.413309 TGTTCATTTGTTTGGACCAAAGT 57.587 34.783 20.14 4.29 35.45 2.66
1928 2788 5.415221 TGTTCATTTGTTTGGACCAAAGTC 58.585 37.500 20.14 10.01 42.73 3.01
1929 2789 5.186797 TGTTCATTTGTTTGGACCAAAGTCT 59.813 36.000 20.14 2.95 43.05 3.24
1930 2790 5.514274 TCATTTGTTTGGACCAAAGTCTC 57.486 39.130 20.14 8.94 43.05 3.36
1931 2791 5.200483 TCATTTGTTTGGACCAAAGTCTCT 58.800 37.500 20.14 1.91 43.05 3.10
1932 2792 5.656416 TCATTTGTTTGGACCAAAGTCTCTT 59.344 36.000 20.14 1.05 43.05 2.85
1933 2793 6.831353 TCATTTGTTTGGACCAAAGTCTCTTA 59.169 34.615 20.14 1.24 43.05 2.10
1934 2794 6.693315 TTTGTTTGGACCAAAGTCTCTTAG 57.307 37.500 20.14 0.00 43.05 2.18
1935 2795 4.134563 TGTTTGGACCAAAGTCTCTTAGC 58.865 43.478 20.14 5.76 43.05 3.09
1936 2796 2.743636 TGGACCAAAGTCTCTTAGCG 57.256 50.000 0.00 0.00 43.05 4.26
1937 2797 1.337823 TGGACCAAAGTCTCTTAGCGC 60.338 52.381 0.00 0.00 43.05 5.92
1938 2798 1.337823 GGACCAAAGTCTCTTAGCGCA 60.338 52.381 11.47 0.00 43.05 6.09
1939 2799 2.413837 GACCAAAGTCTCTTAGCGCAA 58.586 47.619 11.47 0.50 40.10 4.85
1940 2800 2.413453 GACCAAAGTCTCTTAGCGCAAG 59.587 50.000 11.47 11.67 40.10 4.01
1941 2801 2.037251 ACCAAAGTCTCTTAGCGCAAGA 59.963 45.455 11.47 15.40 41.10 3.02
1942 2802 2.413453 CCAAAGTCTCTTAGCGCAAGAC 59.587 50.000 11.47 16.26 38.39 3.01
1943 2803 2.371910 AAGTCTCTTAGCGCAAGACC 57.628 50.000 21.13 13.52 40.21 3.85
1944 2804 1.551452 AGTCTCTTAGCGCAAGACCT 58.449 50.000 21.13 14.93 40.21 3.85
1945 2805 1.896465 AGTCTCTTAGCGCAAGACCTT 59.104 47.619 21.13 7.87 40.21 3.50
1946 2806 2.300437 AGTCTCTTAGCGCAAGACCTTT 59.700 45.455 21.13 7.34 40.21 3.11
1947 2807 3.067833 GTCTCTTAGCGCAAGACCTTTT 58.932 45.455 11.47 0.00 38.39 2.27
1948 2808 3.067106 TCTCTTAGCGCAAGACCTTTTG 58.933 45.455 11.47 4.34 38.39 2.44
1949 2809 2.808543 CTCTTAGCGCAAGACCTTTTGT 59.191 45.455 11.47 0.00 38.39 2.83
1950 2810 3.994392 CTCTTAGCGCAAGACCTTTTGTA 59.006 43.478 11.47 0.00 38.39 2.41
1951 2811 4.382291 TCTTAGCGCAAGACCTTTTGTAA 58.618 39.130 11.47 0.00 38.39 2.41
1952 2812 4.817464 TCTTAGCGCAAGACCTTTTGTAAA 59.183 37.500 11.47 0.00 38.39 2.01
1953 2813 3.349488 AGCGCAAGACCTTTTGTAAAC 57.651 42.857 11.47 0.00 43.02 2.01
1954 2814 2.041244 GCGCAAGACCTTTTGTAAACG 58.959 47.619 0.30 0.00 43.02 3.60
1955 2815 2.041244 CGCAAGACCTTTTGTAAACGC 58.959 47.619 0.00 0.00 43.02 4.84
1956 2816 2.286772 CGCAAGACCTTTTGTAAACGCT 60.287 45.455 0.00 0.00 43.02 5.07
1957 2817 3.059461 CGCAAGACCTTTTGTAAACGCTA 60.059 43.478 0.00 0.00 43.02 4.26
1958 2818 4.378046 CGCAAGACCTTTTGTAAACGCTAT 60.378 41.667 0.00 0.00 43.02 2.97
1959 2819 5.163933 CGCAAGACCTTTTGTAAACGCTATA 60.164 40.000 0.00 0.00 43.02 1.31
1960 2820 6.248631 GCAAGACCTTTTGTAAACGCTATAG 58.751 40.000 0.00 0.00 0.00 1.31
1961 2821 6.248631 CAAGACCTTTTGTAAACGCTATAGC 58.751 40.000 15.09 15.09 37.78 2.97
1975 2835 3.326733 CTATAGCGTGCTATAGCGGAG 57.673 52.381 27.04 13.65 46.26 4.63
1976 2836 0.171455 ATAGCGTGCTATAGCGGAGC 59.829 55.000 22.98 22.98 45.83 4.70
1996 2856 4.406001 GCTATAGCGGGCTATTTGAAAC 57.594 45.455 17.49 0.05 39.65 2.78
1997 2857 3.813166 GCTATAGCGGGCTATTTGAAACA 59.187 43.478 17.49 0.00 39.65 2.83
1998 2858 4.083802 GCTATAGCGGGCTATTTGAAACAG 60.084 45.833 17.49 8.76 39.65 3.16
1999 2859 2.200373 AGCGGGCTATTTGAAACAGT 57.800 45.000 0.00 0.00 0.00 3.55
2000 2860 1.812571 AGCGGGCTATTTGAAACAGTG 59.187 47.619 0.00 0.00 0.00 3.66
2010 2870 7.753580 GGCTATTTGAAACAGTGGTTTACATAC 59.246 37.037 0.00 0.00 46.84 2.39
2011 2871 8.512138 GCTATTTGAAACAGTGGTTTACATACT 58.488 33.333 0.00 0.00 46.84 2.12
2112 2980 0.250513 GCTGACCCGAAAGAGTGGAT 59.749 55.000 0.00 0.00 0.00 3.41
2146 3014 1.739562 GAAGCAGGTGGACAGCGAG 60.740 63.158 0.00 0.00 0.00 5.03
2296 3167 2.669300 TCATGCACTTCTCTGAGCTC 57.331 50.000 6.82 6.82 0.00 4.09
2320 3191 3.458163 CTCCCGAGCAACGCCCTA 61.458 66.667 0.00 0.00 41.07 3.53
2400 3274 0.324943 CTTGGGGTCGGTGTCATCTT 59.675 55.000 0.00 0.00 0.00 2.40
2418 3292 4.380843 TCTTCAATGAAAAGCCCTACCA 57.619 40.909 0.00 0.00 0.00 3.25
2446 3320 5.520288 CGGTAACTACAACATCTCCATCAAG 59.480 44.000 0.00 0.00 0.00 3.02
2565 4892 7.414436 GGTACGTACATATGCAAACAAATGAT 58.586 34.615 26.02 0.00 0.00 2.45
2609 4939 2.247358 TCCTCCTTGCCAAATTGGAAC 58.753 47.619 17.47 0.00 40.96 3.62
2613 4943 1.139163 CTTGCCAAATTGGAACGCAC 58.861 50.000 17.47 0.00 40.96 5.34
2617 4947 1.804372 GCCAAATTGGAACGCACACAA 60.804 47.619 17.47 0.00 40.96 3.33
2795 5137 8.718656 AGAGCAAGGATGGAGTATTTATTAAGT 58.281 33.333 0.00 0.00 0.00 2.24
2818 5160 4.282496 TGTTAAGAACATGGGGTTGTGTT 58.718 39.130 0.00 0.00 40.63 3.32
2820 5162 2.452600 AGAACATGGGGTTGTGTTGT 57.547 45.000 0.00 0.00 40.63 3.32
2821 5163 2.306847 AGAACATGGGGTTGTGTTGTC 58.693 47.619 0.00 0.00 40.63 3.18
2823 5165 1.981256 ACATGGGGTTGTGTTGTCTC 58.019 50.000 0.00 0.00 0.00 3.36
2864 5206 5.337330 GGTGTGGTTAACTGTAGTATCTGCT 60.337 44.000 5.42 0.00 0.00 4.24
2867 5209 7.435488 GTGTGGTTAACTGTAGTATCTGCTATG 59.565 40.741 5.42 0.00 0.00 2.23
2870 5212 7.340999 TGGTTAACTGTAGTATCTGCTATGACA 59.659 37.037 5.42 0.00 0.00 3.58
2880 5222 4.718940 TCTGCTATGACAACGATCAAGA 57.281 40.909 0.00 0.00 30.82 3.02
2968 5310 1.126846 GTTGATGTGCAGCTACGACAC 59.873 52.381 0.00 0.00 34.86 3.67
2974 5316 1.448540 GCAGCTACGACACTGGCAT 60.449 57.895 0.00 0.00 34.38 4.40
3017 5359 6.506513 GCGTGTCAGTTTTTCAGATCTATACG 60.507 42.308 0.00 0.00 0.00 3.06
3191 5537 1.270041 CGGATCTAAAGGCTCTCCAGC 60.270 57.143 0.00 0.00 46.06 4.85
3203 5549 3.077359 GCTCTCCAGCACTTGTATGTTT 58.923 45.455 0.00 0.00 46.06 2.83
3336 5692 4.942761 ACAATTTGACAGGCACAATTCT 57.057 36.364 2.79 0.00 0.00 2.40
3493 5850 0.620556 TCAGTGGCTCAATTCCCTCC 59.379 55.000 0.00 0.00 0.00 4.30
3552 5909 8.446599 AATCTAAGGTCGTTAATTTACCCATG 57.553 34.615 0.00 0.00 33.53 3.66
3690 6048 4.401925 ACCTGCTAAAATGAAGAGCAAGT 58.598 39.130 0.00 0.00 45.15 3.16
3720 6078 2.469952 ACGTTGGTGCCCCTATAGTTA 58.530 47.619 0.00 0.00 0.00 2.24
4402 6778 0.251787 GGTTTCTGCAAGGATGGGGT 60.252 55.000 0.00 0.00 0.00 4.95
4403 6779 1.005450 GGTTTCTGCAAGGATGGGGTA 59.995 52.381 0.00 0.00 0.00 3.69
4498 6874 8.547894 TGTTTAACGCTATATATTCAGTTGCTG 58.452 33.333 0.00 0.00 0.00 4.41
4618 7073 2.158652 CCTGTATGTAGGAGGAGACCGA 60.159 54.545 0.00 0.00 40.42 4.69
4621 7076 4.543689 TGTATGTAGGAGGAGACCGAAAT 58.456 43.478 0.00 0.00 34.73 2.17
4695 7150 6.460123 GCACAAGGTAAGCACTTATATTGCAT 60.460 38.462 13.30 0.93 42.83 3.96
4744 7200 5.119588 CACTTAAATGCAGAATTGGCAACTG 59.880 40.000 0.00 7.83 45.60 3.16
4991 7447 5.221342 GGATATATGGATCCAGAGTAAGCCG 60.221 48.000 21.33 0.00 44.34 5.52
5032 7488 6.880484 TCCAAAATCTTTCTATAGCGTACCA 58.120 36.000 0.00 0.00 0.00 3.25
5043 7499 0.174389 AGCGTACCATGCTCTGAGTG 59.826 55.000 6.53 0.00 34.99 3.51
5046 7502 2.416836 GCGTACCATGCTCTGAGTGTTA 60.417 50.000 6.53 0.00 0.00 2.41
5047 7503 3.845178 CGTACCATGCTCTGAGTGTTAA 58.155 45.455 6.53 0.00 0.00 2.01
5056 7512 3.193691 GCTCTGAGTGTTAAGTGGAGCTA 59.806 47.826 6.53 0.00 40.71 3.32
5122 7578 5.683876 AGAGTGATGTGTATAGCTTTGGT 57.316 39.130 0.00 0.00 0.00 3.67
5125 7581 5.560724 AGTGATGTGTATAGCTTTGGTGTT 58.439 37.500 0.00 0.00 0.00 3.32
5205 7661 1.135603 CATCATTGAGTGGGTGCAACG 60.136 52.381 0.00 0.00 38.12 4.10
5461 7917 4.184629 ACGACCTAAGCATGAGAAATGAC 58.815 43.478 0.00 0.00 0.00 3.06
5597 8054 4.801330 AGACTTGTTGATCATGTACCGA 57.199 40.909 0.00 0.00 35.12 4.69
5620 8077 4.439057 TCGCCAACTGGTTATCTATGTTC 58.561 43.478 0.00 0.00 37.57 3.18
5703 8162 8.664669 ATTATTTGACCAAGTTTCCCACTAAT 57.335 30.769 0.00 0.00 32.94 1.73
5704 8163 9.762381 ATTATTTGACCAAGTTTCCCACTAATA 57.238 29.630 0.00 0.00 32.94 0.98
5705 8164 6.887626 TTTGACCAAGTTTCCCACTAATAC 57.112 37.500 0.00 0.00 32.94 1.89
5729 8189 7.648142 ACATTGTATGTTCAACCAGTAACTTG 58.352 34.615 0.00 0.00 41.63 3.16
5732 8192 7.633193 TGTATGTTCAACCAGTAACTTGTTT 57.367 32.000 0.00 0.00 0.00 2.83
5778 8238 7.889589 ACTTTCCTGAAACAAAAGTCAAAAG 57.110 32.000 0.00 0.00 38.51 2.27
5817 9128 5.666969 TCGTGTGTTGATCGAATTTCTTT 57.333 34.783 0.00 0.00 0.00 2.52
5852 9163 7.520451 ACTATTAACTTGACCCCTTGTTTTC 57.480 36.000 0.00 0.00 0.00 2.29
5854 9165 1.029681 ACTTGACCCCTTGTTTTCGC 58.970 50.000 0.00 0.00 0.00 4.70
5878 9190 0.687920 TCGCAGTTGGATAACCACCA 59.312 50.000 0.00 0.00 46.80 4.17
5879 9191 1.280710 TCGCAGTTGGATAACCACCAT 59.719 47.619 0.00 0.00 46.80 3.55
5938 9376 6.330278 TCATTTCTAAGACCAGTCACGTATG 58.670 40.000 0.00 0.00 0.00 2.39
5939 9377 3.777465 TCTAAGACCAGTCACGTATGC 57.223 47.619 0.00 0.00 0.00 3.14
5955 9393 4.878971 ACGTATGCTGGCATTGTACATTTA 59.121 37.500 13.39 0.00 37.82 1.40
5956 9394 5.355630 ACGTATGCTGGCATTGTACATTTAA 59.644 36.000 13.39 0.00 37.82 1.52
5963 9401 6.092533 GCTGGCATTGTACATTTAAATTGCTT 59.907 34.615 16.01 0.00 0.00 3.91
6004 9452 5.817816 AGCTCACCGGACAAGAAATTAATAG 59.182 40.000 9.46 0.00 0.00 1.73
6033 9481 6.430925 ACAAAGAGCAAATTACATGTAGCAGA 59.569 34.615 14.95 0.00 0.00 4.26
6067 9515 2.056223 TTGACGGGGGATCGACTCC 61.056 63.158 0.00 0.00 44.11 3.85
6128 9595 0.322997 TAAATTGGTGTCCCAGCCGG 60.323 55.000 0.00 0.00 43.15 6.13
6129 9596 2.366153 AAATTGGTGTCCCAGCCGGT 62.366 55.000 1.90 0.00 43.15 5.28
6130 9597 2.366153 AATTGGTGTCCCAGCCGGTT 62.366 55.000 1.90 0.00 43.15 4.44
6131 9598 1.493854 ATTGGTGTCCCAGCCGGTTA 61.494 55.000 1.90 0.00 43.15 2.85
6155 10038 1.401539 GGATCGCCTCAACTTTTGTGC 60.402 52.381 0.00 0.00 0.00 4.57
6185 10072 0.321021 TGGTCCCAAATTGCATGTGC 59.679 50.000 0.00 0.00 42.50 4.57
6203 10090 0.601311 GCGCCTCAAGTCTCAACTGT 60.601 55.000 0.00 0.00 35.36 3.55
6215 10102 4.459685 AGTCTCAACTGTATAGCGTGTCTT 59.540 41.667 0.00 0.00 33.32 3.01
6218 10105 1.909376 ACTGTATAGCGTGTCTTGCG 58.091 50.000 0.00 0.00 37.44 4.85
6219 10106 1.200483 CTGTATAGCGTGTCTTGCGG 58.800 55.000 0.00 0.00 37.44 5.69
6224 10111 2.089887 TAGCGTGTCTTGCGGACCAA 62.090 55.000 7.09 0.00 43.89 3.67
6228 10115 0.818040 GTGTCTTGCGGACCAACCTT 60.818 55.000 7.09 0.00 43.89 3.50
6256 10143 1.348064 TGGTTAGGAGGACAGTGGTG 58.652 55.000 0.00 0.00 0.00 4.17
6258 10145 1.697982 GGTTAGGAGGACAGTGGTGTT 59.302 52.381 0.00 0.00 36.88 3.32
6259 10146 2.105993 GGTTAGGAGGACAGTGGTGTTT 59.894 50.000 0.00 0.00 36.88 2.83
6269 10156 4.091517 TGGTGTTTCCACTCCCCA 57.908 55.556 0.00 0.00 41.93 4.96
6270 10157 1.843421 TGGTGTTTCCACTCCCCAG 59.157 57.895 0.00 0.00 41.93 4.45
6271 10158 1.603739 GGTGTTTCCACTCCCCAGC 60.604 63.158 0.00 0.00 41.53 4.85
6272 10159 1.456287 GTGTTTCCACTCCCCAGCT 59.544 57.895 0.00 0.00 38.61 4.24
6273 10160 0.890996 GTGTTTCCACTCCCCAGCTG 60.891 60.000 6.78 6.78 38.61 4.24
6274 10161 1.973812 GTTTCCACTCCCCAGCTGC 60.974 63.158 8.66 0.00 0.00 5.25
6275 10162 3.210012 TTTCCACTCCCCAGCTGCC 62.210 63.158 8.66 0.00 0.00 4.85
6278 10165 4.729918 CACTCCCCAGCTGCCCAC 62.730 72.222 8.66 0.00 0.00 4.61
6292 10179 2.033602 CCACCGGGGTTCAAGTCC 59.966 66.667 6.32 0.00 0.00 3.85
6295 10182 0.688487 CACCGGGGTTCAAGTCCTAA 59.312 55.000 6.32 0.00 0.00 2.69
6301 10188 4.076394 CGGGGTTCAAGTCCTAAATTTGA 58.924 43.478 0.00 0.00 0.00 2.69
6303 10190 4.082949 GGGGTTCAAGTCCTAAATTTGACG 60.083 45.833 0.00 0.00 36.61 4.35
6305 10192 5.449304 GGTTCAAGTCCTAAATTTGACGTG 58.551 41.667 14.39 14.39 40.74 4.49
6307 10194 4.069304 TCAAGTCCTAAATTTGACGTGGG 58.931 43.478 18.00 0.00 40.10 4.61
6310 10197 3.143728 GTCCTAAATTTGACGTGGGTGT 58.856 45.455 0.00 0.00 0.00 4.16
6312 10199 4.037089 GTCCTAAATTTGACGTGGGTGTTT 59.963 41.667 0.00 0.00 0.00 2.83
6323 10210 4.996062 CGTGGGTGTTTACGTTATTTCT 57.004 40.909 0.00 0.00 35.70 2.52
6325 10212 4.448395 CGTGGGTGTTTACGTTATTTCTGA 59.552 41.667 0.00 0.00 35.70 3.27
6331 10218 9.896263 GGGTGTTTACGTTATTTCTGAATTTAA 57.104 29.630 0.00 0.00 0.00 1.52
6349 10236 7.602265 TGAATTTAATTTAGGCTTTTGAGGTGC 59.398 33.333 0.00 0.00 0.00 5.01
6355 10242 3.659183 AGGCTTTTGAGGTGCTCATAT 57.341 42.857 0.00 0.00 40.39 1.78
6357 10244 3.054139 AGGCTTTTGAGGTGCTCATATGA 60.054 43.478 5.07 5.07 40.39 2.15
6366 10253 3.077359 GGTGCTCATATGAATAGGGTGC 58.923 50.000 6.90 5.46 0.00 5.01
6367 10254 2.738846 GTGCTCATATGAATAGGGTGCG 59.261 50.000 6.90 0.00 0.00 5.34
6370 10257 2.738846 CTCATATGAATAGGGTGCGCAC 59.261 50.000 32.15 32.15 0.00 5.34
6371 10258 2.103941 TCATATGAATAGGGTGCGCACA 59.896 45.455 38.60 21.64 0.00 4.57
6372 10259 1.948104 TATGAATAGGGTGCGCACAC 58.052 50.000 38.60 36.99 46.66 3.82
6400 10288 4.406648 TCATAGGGTGAGTGTATGCTTG 57.593 45.455 0.00 0.00 31.80 4.01
6401 10289 3.774766 TCATAGGGTGAGTGTATGCTTGT 59.225 43.478 0.00 0.00 31.80 3.16
6406 10294 3.623060 GGGTGAGTGTATGCTTGTGTATG 59.377 47.826 0.00 0.00 0.00 2.39
6410 10298 5.582269 GTGAGTGTATGCTTGTGTATGTGAT 59.418 40.000 0.00 0.00 0.00 3.06
6411 10299 6.092670 GTGAGTGTATGCTTGTGTATGTGATT 59.907 38.462 0.00 0.00 0.00 2.57
6416 10304 5.808042 ATGCTTGTGTATGTGATTGACTC 57.192 39.130 0.00 0.00 0.00 3.36
6426 10314 6.751888 TGTATGTGATTGACTCTGATTGTACG 59.248 38.462 0.00 0.00 0.00 3.67
6427 10315 5.134202 TGTGATTGACTCTGATTGTACGT 57.866 39.130 0.00 0.00 0.00 3.57
6428 10316 5.161358 TGTGATTGACTCTGATTGTACGTC 58.839 41.667 0.00 0.00 0.00 4.34
6477 10403 8.926710 ACTTCAATTTTCTACACAATAGACGAG 58.073 33.333 0.00 0.00 0.00 4.18
6510 10436 0.037303 ACAGACCAACCCTGCATCAG 59.963 55.000 0.00 0.00 35.14 2.90
6527 10453 4.036971 GCATCAGGTCAGTCGTCTACTAAT 59.963 45.833 0.00 0.00 35.76 1.73
6530 10456 2.688958 AGGTCAGTCGTCTACTAATGCC 59.311 50.000 0.00 0.00 35.76 4.40
6553 10479 2.148768 GGCCGCACTAATAATGGTACC 58.851 52.381 4.43 4.43 0.00 3.34
6554 10480 2.224450 GGCCGCACTAATAATGGTACCT 60.224 50.000 14.36 0.00 0.00 3.08
6555 10481 3.473625 GCCGCACTAATAATGGTACCTT 58.526 45.455 14.36 3.50 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.817258 TGGGAATTAAGAACTGTTGCCG 59.183 45.455 0.00 0.00 35.14 5.69
1 2 4.864704 TTGGGAATTAAGAACTGTTGCC 57.135 40.909 0.00 0.00 33.27 4.52
2 3 5.634859 CACATTGGGAATTAAGAACTGTTGC 59.365 40.000 0.00 0.00 0.00 4.17
3 4 6.015519 TCCACATTGGGAATTAAGAACTGTTG 60.016 38.462 0.00 0.00 38.32 3.33
4 5 6.074648 TCCACATTGGGAATTAAGAACTGTT 58.925 36.000 0.00 0.00 38.32 3.16
5 6 5.640147 TCCACATTGGGAATTAAGAACTGT 58.360 37.500 0.00 0.00 38.32 3.55
6 7 5.945784 TCTCCACATTGGGAATTAAGAACTG 59.054 40.000 0.00 0.00 38.32 3.16
7 8 6.139679 TCTCCACATTGGGAATTAAGAACT 57.860 37.500 0.00 0.00 38.32 3.01
8 9 5.163612 GCTCTCCACATTGGGAATTAAGAAC 60.164 44.000 0.00 0.00 38.32 3.01
9 10 4.949856 GCTCTCCACATTGGGAATTAAGAA 59.050 41.667 0.00 0.00 38.32 2.52
11 12 4.272489 TGCTCTCCACATTGGGAATTAAG 58.728 43.478 0.00 0.00 38.32 1.85
12 13 4.314522 TGCTCTCCACATTGGGAATTAA 57.685 40.909 0.00 0.00 38.32 1.40
13 14 4.079844 TCATGCTCTCCACATTGGGAATTA 60.080 41.667 0.00 0.00 38.32 1.40
18 19 2.359981 ATCATGCTCTCCACATTGGG 57.640 50.000 0.00 0.00 38.32 4.12
29 30 8.891720 AGAAATGAGAGAACTTTAATCATGCTC 58.108 33.333 0.00 0.00 31.24 4.26
30 31 8.804912 AGAAATGAGAGAACTTTAATCATGCT 57.195 30.769 0.00 0.00 31.24 3.79
40 41 9.902684 ATTATCACATGAGAAATGAGAGAACTT 57.097 29.630 0.00 0.00 0.00 2.66
133 134 6.790285 TTTGTAAGAATCGGTTACTGGAAC 57.210 37.500 0.00 0.00 37.31 3.62
160 161 4.320608 TCTTGCGGCAGAAAGAATTTTT 57.679 36.364 4.60 0.00 39.04 1.94
161 162 4.240096 CATCTTGCGGCAGAAAGAATTTT 58.760 39.130 11.57 0.00 44.73 1.82
162 163 3.367703 CCATCTTGCGGCAGAAAGAATTT 60.368 43.478 11.57 0.00 44.73 1.82
163 164 2.165030 CCATCTTGCGGCAGAAAGAATT 59.835 45.455 11.57 0.00 44.73 2.17
164 165 1.747355 CCATCTTGCGGCAGAAAGAAT 59.253 47.619 11.57 0.00 44.73 2.40
165 166 1.167851 CCATCTTGCGGCAGAAAGAA 58.832 50.000 11.57 0.00 44.73 2.52
166 167 0.036732 ACCATCTTGCGGCAGAAAGA 59.963 50.000 9.91 9.91 45.58 2.52
167 168 0.883833 AACCATCTTGCGGCAGAAAG 59.116 50.000 1.67 0.00 34.19 2.62
168 169 0.597568 CAACCATCTTGCGGCAGAAA 59.402 50.000 1.67 0.00 0.00 2.52
169 170 0.250684 TCAACCATCTTGCGGCAGAA 60.251 50.000 1.67 0.00 0.00 3.02
170 171 0.250684 TTCAACCATCTTGCGGCAGA 60.251 50.000 1.67 3.67 0.00 4.26
171 172 0.169672 CTTCAACCATCTTGCGGCAG 59.830 55.000 1.67 0.00 0.00 4.85
172 173 0.250684 TCTTCAACCATCTTGCGGCA 60.251 50.000 0.00 0.00 0.00 5.69
173 174 1.098050 ATCTTCAACCATCTTGCGGC 58.902 50.000 0.00 0.00 0.00 6.53
174 175 2.874701 CCTATCTTCAACCATCTTGCGG 59.125 50.000 0.00 0.00 0.00 5.69
175 176 2.874701 CCCTATCTTCAACCATCTTGCG 59.125 50.000 0.00 0.00 0.00 4.85
183 184 3.217626 CTTGCATCCCCTATCTTCAACC 58.782 50.000 0.00 0.00 0.00 3.77
185 186 3.122480 TCCTTGCATCCCCTATCTTCAA 58.878 45.455 0.00 0.00 0.00 2.69
216 217 0.269173 AGGACTCCCCTCCCATTAGG 59.731 60.000 0.00 0.00 43.31 2.69
222 223 1.575447 AAATGCAGGACTCCCCTCCC 61.575 60.000 0.00 0.00 45.60 4.30
232 233 7.503230 TCTTATGCTATGATTTCAAATGCAGGA 59.497 33.333 0.00 0.00 34.71 3.86
256 257 6.805016 ACTGGTCATCTACATCAAATCTCT 57.195 37.500 0.00 0.00 0.00 3.10
257 258 7.721402 AGTACTGGTCATCTACATCAAATCTC 58.279 38.462 0.00 0.00 0.00 2.75
263 264 7.178451 TCAAGAAAGTACTGGTCATCTACATCA 59.822 37.037 0.00 0.00 0.00 3.07
281 282 5.867716 CCAAGGAATTTGCATCTCAAGAAAG 59.132 40.000 0.00 0.00 35.84 2.62
289 290 2.827921 GGTGTCCAAGGAATTTGCATCT 59.172 45.455 0.00 0.00 35.37 2.90
300 301 2.125106 GGCGCTAGGTGTCCAAGG 60.125 66.667 7.64 0.00 0.00 3.61
315 316 3.577415 ACGGAGGGAGTACATAATAAGGC 59.423 47.826 0.00 0.00 0.00 4.35
317 318 5.458891 CGAACGGAGGGAGTACATAATAAG 58.541 45.833 0.00 0.00 0.00 1.73
322 323 1.212688 TCCGAACGGAGGGAGTACATA 59.787 52.381 12.04 0.00 39.76 2.29
326 327 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
327 328 1.856629 TAATTCCGAACGGAGGGAGT 58.143 50.000 15.34 4.12 46.06 3.85
328 329 3.470645 AATAATTCCGAACGGAGGGAG 57.529 47.619 15.34 0.00 46.06 4.30
329 330 3.054948 ACAAATAATTCCGAACGGAGGGA 60.055 43.478 15.34 2.49 46.06 4.20
330 331 3.275999 ACAAATAATTCCGAACGGAGGG 58.724 45.455 15.34 5.11 46.06 4.30
331 332 3.000925 CGACAAATAATTCCGAACGGAGG 59.999 47.826 15.34 4.52 46.06 4.30
332 333 3.543460 GCGACAAATAATTCCGAACGGAG 60.543 47.826 15.34 5.60 46.06 4.63
333 334 2.349275 GCGACAAATAATTCCGAACGGA 59.651 45.455 12.04 12.04 43.52 4.69
334 335 2.094575 TGCGACAAATAATTCCGAACGG 59.905 45.455 6.94 6.94 0.00 4.44
335 336 3.061563 TCTGCGACAAATAATTCCGAACG 59.938 43.478 0.00 0.00 0.00 3.95
336 337 4.593597 TCTGCGACAAATAATTCCGAAC 57.406 40.909 0.00 0.00 0.00 3.95
337 338 5.614923 TTTCTGCGACAAATAATTCCGAA 57.385 34.783 0.00 0.00 0.00 4.30
338 339 5.811399 ATTTCTGCGACAAATAATTCCGA 57.189 34.783 0.00 0.00 0.00 4.55
339 340 6.943981 TCTATTTCTGCGACAAATAATTCCG 58.056 36.000 0.00 0.00 0.00 4.30
340 341 8.345565 ACATCTATTTCTGCGACAAATAATTCC 58.654 33.333 0.00 0.00 0.00 3.01
344 345 9.764363 AGATACATCTATTTCTGCGACAAATAA 57.236 29.630 0.00 0.00 34.85 1.40
346 347 9.416794 CTAGATACATCTATTTCTGCGACAAAT 57.583 33.333 0.00 0.00 38.60 2.32
347 348 8.630037 TCTAGATACATCTATTTCTGCGACAAA 58.370 33.333 0.00 0.00 38.60 2.83
348 349 8.076781 GTCTAGATACATCTATTTCTGCGACAA 58.923 37.037 0.00 0.00 38.60 3.18
349 350 7.445707 AGTCTAGATACATCTATTTCTGCGACA 59.554 37.037 0.00 0.00 38.60 4.35
350 351 7.812648 AGTCTAGATACATCTATTTCTGCGAC 58.187 38.462 0.00 2.94 38.60 5.19
351 352 7.987750 AGTCTAGATACATCTATTTCTGCGA 57.012 36.000 0.00 0.00 38.60 5.10
380 381 9.967346 CTCGAAAATGGATGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
381 382 9.350951 TCTCGAAAATGGATGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
382 383 8.138712 GTCTCGAAAATGGATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
383 384 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
384 385 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
385 386 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
386 387 8.824159 ATTGTCTCGAAAATGGATGTATCTAG 57.176 34.615 0.00 0.00 0.00 2.43
388 389 9.613428 TTAATTGTCTCGAAAATGGATGTATCT 57.387 29.630 0.00 0.00 0.00 1.98
392 393 8.190784 GGAATTAATTGTCTCGAAAATGGATGT 58.809 33.333 5.17 0.00 0.00 3.06
393 394 7.376866 CGGAATTAATTGTCTCGAAAATGGATG 59.623 37.037 5.17 0.00 0.00 3.51
394 395 7.282224 TCGGAATTAATTGTCTCGAAAATGGAT 59.718 33.333 5.17 0.00 0.00 3.41
395 396 6.596106 TCGGAATTAATTGTCTCGAAAATGGA 59.404 34.615 5.17 0.00 0.00 3.41
396 397 6.781138 TCGGAATTAATTGTCTCGAAAATGG 58.219 36.000 5.17 0.00 0.00 3.16
397 398 7.045612 CGTTCGGAATTAATTGTCTCGAAAATG 60.046 37.037 18.26 11.96 37.00 2.32
398 399 6.959311 CGTTCGGAATTAATTGTCTCGAAAAT 59.041 34.615 18.26 0.00 37.00 1.82
399 400 6.301108 CGTTCGGAATTAATTGTCTCGAAAA 58.699 36.000 18.26 4.66 37.00 2.29
400 401 5.163933 CCGTTCGGAATTAATTGTCTCGAAA 60.164 40.000 18.26 7.80 37.00 3.46
401 402 4.327898 CCGTTCGGAATTAATTGTCTCGAA 59.672 41.667 5.17 11.91 33.66 3.71
402 403 3.861113 CCGTTCGGAATTAATTGTCTCGA 59.139 43.478 5.17 6.88 0.00 4.04
403 404 3.861113 TCCGTTCGGAATTAATTGTCTCG 59.139 43.478 11.66 4.73 0.00 4.04
404 405 4.270325 CCTCCGTTCGGAATTAATTGTCTC 59.730 45.833 14.79 0.00 33.41 3.36
405 406 4.189231 CCTCCGTTCGGAATTAATTGTCT 58.811 43.478 14.79 0.00 33.41 3.41
406 407 3.311596 CCCTCCGTTCGGAATTAATTGTC 59.688 47.826 14.79 0.00 33.41 3.18
407 408 3.054948 TCCCTCCGTTCGGAATTAATTGT 60.055 43.478 14.79 0.00 33.41 2.71
408 409 3.537580 TCCCTCCGTTCGGAATTAATTG 58.462 45.455 14.79 1.97 33.41 2.32
409 410 3.199289 ACTCCCTCCGTTCGGAATTAATT 59.801 43.478 14.79 0.00 33.41 1.40
410 411 2.770232 ACTCCCTCCGTTCGGAATTAAT 59.230 45.455 14.79 0.00 33.41 1.40
411 412 2.181975 ACTCCCTCCGTTCGGAATTAA 58.818 47.619 14.79 1.25 33.41 1.40
412 413 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
413 414 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
414 415 1.962100 GATACTCCCTCCGTTCGGAAT 59.038 52.381 14.79 4.68 33.41 3.01
415 416 1.341285 TGATACTCCCTCCGTTCGGAA 60.341 52.381 14.79 0.00 33.41 4.30
416 417 0.256752 TGATACTCCCTCCGTTCGGA 59.743 55.000 13.34 13.34 0.00 4.55
417 418 0.669077 CTGATACTCCCTCCGTTCGG 59.331 60.000 4.74 4.74 0.00 4.30
418 419 1.390565 ACTGATACTCCCTCCGTTCG 58.609 55.000 0.00 0.00 0.00 3.95
419 420 3.889520 AAACTGATACTCCCTCCGTTC 57.110 47.619 0.00 0.00 0.00 3.95
420 421 4.161754 CCTAAAACTGATACTCCCTCCGTT 59.838 45.833 0.00 0.00 0.00 4.44
421 422 3.705072 CCTAAAACTGATACTCCCTCCGT 59.295 47.826 0.00 0.00 0.00 4.69
422 423 3.958798 TCCTAAAACTGATACTCCCTCCG 59.041 47.826 0.00 0.00 0.00 4.63
423 424 4.101274 GGTCCTAAAACTGATACTCCCTCC 59.899 50.000 0.00 0.00 0.00 4.30
424 425 4.715297 TGGTCCTAAAACTGATACTCCCTC 59.285 45.833 0.00 0.00 0.00 4.30
425 426 4.695606 TGGTCCTAAAACTGATACTCCCT 58.304 43.478 0.00 0.00 0.00 4.20
426 427 5.632034 ATGGTCCTAAAACTGATACTCCC 57.368 43.478 0.00 0.00 0.00 4.30
427 428 7.387643 GGATATGGTCCTAAAACTGATACTCC 58.612 42.308 0.00 0.00 44.16 3.85
452 453 2.918712 AGGATTAATGCCGAGGTCAG 57.081 50.000 2.98 0.00 0.00 3.51
492 493 2.624674 AAACCTGCAACAGCTCCCGT 62.625 55.000 0.00 0.00 0.00 5.28
494 495 0.315251 GAAAACCTGCAACAGCTCCC 59.685 55.000 0.00 0.00 0.00 4.30
505 506 2.609459 CCACTAGCGCATAGAAAACCTG 59.391 50.000 11.47 2.12 35.30 4.00
507 508 1.940613 CCCACTAGCGCATAGAAAACC 59.059 52.381 11.47 0.00 35.30 3.27
509 510 1.663695 GCCCACTAGCGCATAGAAAA 58.336 50.000 11.47 0.00 35.30 2.29
510 511 3.379650 GCCCACTAGCGCATAGAAA 57.620 52.632 11.47 0.00 35.30 2.52
519 520 1.440145 GCAGAAATCCGCCCACTAGC 61.440 60.000 0.00 0.00 0.00 3.42
522 523 0.179000 CTAGCAGAAATCCGCCCACT 59.821 55.000 0.00 0.00 0.00 4.00
523 524 0.107654 ACTAGCAGAAATCCGCCCAC 60.108 55.000 0.00 0.00 0.00 4.61
524 525 1.138266 GTACTAGCAGAAATCCGCCCA 59.862 52.381 0.00 0.00 0.00 5.36
525 526 1.413077 AGTACTAGCAGAAATCCGCCC 59.587 52.381 0.00 0.00 0.00 6.13
526 527 2.100916 TCAGTACTAGCAGAAATCCGCC 59.899 50.000 0.00 0.00 0.00 6.13
527 528 3.438297 TCAGTACTAGCAGAAATCCGC 57.562 47.619 0.00 0.00 0.00 5.54
529 530 6.273825 TCGAATTCAGTACTAGCAGAAATCC 58.726 40.000 6.22 0.00 0.00 3.01
530 531 7.938563 ATCGAATTCAGTACTAGCAGAAATC 57.061 36.000 6.22 0.00 0.00 2.17
531 532 7.591795 CGTATCGAATTCAGTACTAGCAGAAAT 59.408 37.037 6.22 0.00 0.00 2.17
533 534 6.427974 CGTATCGAATTCAGTACTAGCAGAA 58.572 40.000 6.22 0.00 0.00 3.02
534 535 5.560375 GCGTATCGAATTCAGTACTAGCAGA 60.560 44.000 6.22 0.00 0.00 4.26
535 536 4.613448 GCGTATCGAATTCAGTACTAGCAG 59.387 45.833 6.22 0.00 0.00 4.24
537 1293 3.598668 CGCGTATCGAATTCAGTACTAGC 59.401 47.826 6.22 6.64 41.67 3.42
540 1296 2.615447 TCCGCGTATCGAATTCAGTACT 59.385 45.455 4.92 0.00 41.67 2.73
541 1297 2.718027 GTCCGCGTATCGAATTCAGTAC 59.282 50.000 4.92 6.70 41.67 2.73
552 1308 3.059325 ACGATACTACAAGTCCGCGTATC 60.059 47.826 4.92 1.37 35.37 2.24
555 1311 1.089920 ACGATACTACAAGTCCGCGT 58.910 50.000 4.92 0.00 30.85 6.01
556 1312 1.844357 CAACGATACTACAAGTCCGCG 59.156 52.381 0.00 0.00 30.85 6.46
561 1317 7.380536 TGATTGTAACCAACGATACTACAAGT 58.619 34.615 0.00 0.00 36.29 3.16
563 1319 7.380536 ACTGATTGTAACCAACGATACTACAA 58.619 34.615 0.00 0.00 37.01 2.41
584 1340 4.705991 TGGTACACATGAATACGGTACTGA 59.294 41.667 9.17 0.00 35.75 3.41
615 1371 5.969435 TCGAACATAGTTAGAGCACGTATTG 59.031 40.000 0.00 0.00 0.00 1.90
616 1372 5.970023 GTCGAACATAGTTAGAGCACGTATT 59.030 40.000 0.00 0.00 0.00 1.89
632 1388 5.575957 CGTAGTTGTACCATAGTCGAACAT 58.424 41.667 0.00 0.00 0.00 2.71
637 1393 3.687572 AGCGTAGTTGTACCATAGTCG 57.312 47.619 0.00 0.00 0.00 4.18
659 1459 2.147436 TGCCACGCCAAAAGAAATTC 57.853 45.000 0.00 0.00 0.00 2.17
670 1470 0.740149 TTGATGATTGATGCCACGCC 59.260 50.000 0.00 0.00 0.00 5.68
673 1473 5.447624 TGATGATTGATGATTGATGCCAC 57.552 39.130 0.00 0.00 0.00 5.01
674 1474 6.454795 CATTGATGATTGATGATTGATGCCA 58.545 36.000 0.00 0.00 0.00 4.92
675 1475 5.869344 CCATTGATGATTGATGATTGATGCC 59.131 40.000 0.00 0.00 0.00 4.40
676 1476 5.348724 GCCATTGATGATTGATGATTGATGC 59.651 40.000 0.00 0.00 0.00 3.91
677 1477 6.691508 AGCCATTGATGATTGATGATTGATG 58.308 36.000 0.00 0.00 0.00 3.07
678 1478 6.721668 AGAGCCATTGATGATTGATGATTGAT 59.278 34.615 0.00 0.00 0.00 2.57
679 1479 6.068670 AGAGCCATTGATGATTGATGATTGA 58.931 36.000 0.00 0.00 0.00 2.57
680 1480 6.207614 AGAGAGCCATTGATGATTGATGATTG 59.792 38.462 0.00 0.00 0.00 2.67
681 1481 6.307776 AGAGAGCCATTGATGATTGATGATT 58.692 36.000 0.00 0.00 0.00 2.57
682 1482 5.882040 AGAGAGCCATTGATGATTGATGAT 58.118 37.500 0.00 0.00 0.00 2.45
683 1483 5.306114 AGAGAGCCATTGATGATTGATGA 57.694 39.130 0.00 0.00 0.00 2.92
686 1486 3.493873 CCGAGAGAGCCATTGATGATTGA 60.494 47.826 0.00 0.00 0.00 2.57
688 1488 2.809665 GCCGAGAGAGCCATTGATGATT 60.810 50.000 0.00 0.00 0.00 2.57
689 1489 1.270732 GCCGAGAGAGCCATTGATGAT 60.271 52.381 0.00 0.00 0.00 2.45
690 1490 0.105593 GCCGAGAGAGCCATTGATGA 59.894 55.000 0.00 0.00 0.00 2.92
691 1491 0.179065 TGCCGAGAGAGCCATTGATG 60.179 55.000 0.00 0.00 0.00 3.07
692 1492 0.543277 TTGCCGAGAGAGCCATTGAT 59.457 50.000 0.00 0.00 0.00 2.57
693 1493 0.391661 GTTGCCGAGAGAGCCATTGA 60.392 55.000 0.00 0.00 0.00 2.57
694 1494 1.372087 GGTTGCCGAGAGAGCCATTG 61.372 60.000 0.00 0.00 0.00 2.82
695 1495 1.078143 GGTTGCCGAGAGAGCCATT 60.078 57.895 0.00 0.00 0.00 3.16
696 1496 2.586792 GGTTGCCGAGAGAGCCAT 59.413 61.111 0.00 0.00 0.00 4.40
697 1497 3.706373 GGGTTGCCGAGAGAGCCA 61.706 66.667 0.00 0.00 0.00 4.75
698 1498 2.860972 GAAGGGTTGCCGAGAGAGCC 62.861 65.000 0.00 0.00 0.00 4.70
699 1499 1.448717 GAAGGGTTGCCGAGAGAGC 60.449 63.158 0.00 0.00 0.00 4.09
700 1500 1.219393 GGAAGGGTTGCCGAGAGAG 59.781 63.158 0.00 0.00 0.00 3.20
701 1501 0.909610 ATGGAAGGGTTGCCGAGAGA 60.910 55.000 0.00 0.00 0.00 3.10
702 1502 0.745845 CATGGAAGGGTTGCCGAGAG 60.746 60.000 0.00 0.00 0.00 3.20
703 1503 1.299648 CATGGAAGGGTTGCCGAGA 59.700 57.895 0.00 0.00 0.00 4.04
704 1504 2.409870 GCATGGAAGGGTTGCCGAG 61.410 63.158 0.00 0.00 0.00 4.63
705 1505 2.361104 GCATGGAAGGGTTGCCGA 60.361 61.111 0.00 0.00 0.00 5.54
706 1506 1.814772 TTTGCATGGAAGGGTTGCCG 61.815 55.000 0.00 0.00 35.51 5.69
707 1507 0.320683 GTTTGCATGGAAGGGTTGCC 60.321 55.000 0.00 0.00 35.51 4.52
708 1508 0.320683 GGTTTGCATGGAAGGGTTGC 60.321 55.000 0.00 0.00 36.91 4.17
709 1509 1.273327 GAGGTTTGCATGGAAGGGTTG 59.727 52.381 0.00 0.00 0.00 3.77
710 1510 1.632589 GAGGTTTGCATGGAAGGGTT 58.367 50.000 0.00 0.00 0.00 4.11
711 1511 0.251787 GGAGGTTTGCATGGAAGGGT 60.252 55.000 0.00 0.00 0.00 4.34
712 1512 0.040204 AGGAGGTTTGCATGGAAGGG 59.960 55.000 0.00 0.00 0.00 3.95
713 1513 1.005215 AGAGGAGGTTTGCATGGAAGG 59.995 52.381 0.00 0.00 0.00 3.46
714 1514 2.490903 CAAGAGGAGGTTTGCATGGAAG 59.509 50.000 0.00 0.00 0.00 3.46
715 1515 2.517959 CAAGAGGAGGTTTGCATGGAA 58.482 47.619 0.00 0.00 0.00 3.53
716 1516 1.887956 GCAAGAGGAGGTTTGCATGGA 60.888 52.381 4.48 0.00 46.72 3.41
727 1527 0.455295 GTCTGACGACGCAAGAGGAG 60.455 60.000 0.00 0.00 43.62 3.69
746 1546 0.882042 GGCCTGCATGGATCTGTACG 60.882 60.000 0.00 0.00 38.35 3.67
749 1549 2.191375 CGGCCTGCATGGATCTGT 59.809 61.111 0.00 0.00 38.35 3.41
750 1550 2.184830 CACGGCCTGCATGGATCTG 61.185 63.158 0.00 0.00 38.35 2.90
751 1551 2.191375 CACGGCCTGCATGGATCT 59.809 61.111 0.00 0.00 38.35 2.75
752 1552 2.124570 ACACGGCCTGCATGGATC 60.125 61.111 0.00 0.00 38.35 3.36
753 1553 2.438975 CACACGGCCTGCATGGAT 60.439 61.111 0.00 0.00 38.35 3.41
756 1556 4.111016 CAGCACACGGCCTGCATG 62.111 66.667 16.94 8.81 46.50 4.06
760 1560 4.624364 TGTCCAGCACACGGCCTG 62.624 66.667 0.00 0.21 46.50 4.85
761 1561 4.626081 GTGTCCAGCACACGGCCT 62.626 66.667 0.00 0.00 46.12 5.19
769 1569 0.248565 GCTCATCTCTGTGTCCAGCA 59.751 55.000 0.00 0.00 38.66 4.41
770 1570 0.248565 TGCTCATCTCTGTGTCCAGC 59.751 55.000 0.00 0.00 38.66 4.85
771 1571 1.739707 GCTGCTCATCTCTGTGTCCAG 60.740 57.143 0.00 0.00 40.25 3.86
772 1572 0.248565 GCTGCTCATCTCTGTGTCCA 59.751 55.000 0.00 0.00 0.00 4.02
773 1573 0.536260 AGCTGCTCATCTCTGTGTCC 59.464 55.000 0.00 0.00 0.00 4.02
774 1574 1.204231 TCAGCTGCTCATCTCTGTGTC 59.796 52.381 9.47 0.00 0.00 3.67
775 1575 1.067000 GTCAGCTGCTCATCTCTGTGT 60.067 52.381 9.47 0.00 0.00 3.72
776 1576 1.642728 GTCAGCTGCTCATCTCTGTG 58.357 55.000 9.47 0.00 0.00 3.66
777 1577 0.173029 CGTCAGCTGCTCATCTCTGT 59.827 55.000 9.47 0.00 0.00 3.41
778 1578 0.173029 ACGTCAGCTGCTCATCTCTG 59.827 55.000 9.47 0.00 0.00 3.35
779 1579 0.173029 CACGTCAGCTGCTCATCTCT 59.827 55.000 9.47 0.00 0.00 3.10
780 1580 0.805322 CCACGTCAGCTGCTCATCTC 60.805 60.000 9.47 0.00 0.00 2.75
781 1581 1.217511 CCACGTCAGCTGCTCATCT 59.782 57.895 9.47 0.00 0.00 2.90
782 1582 1.079543 ACCACGTCAGCTGCTCATC 60.080 57.895 9.47 0.00 0.00 2.92
783 1583 1.079543 GACCACGTCAGCTGCTCAT 60.080 57.895 9.47 0.00 32.09 2.90
784 1584 2.026945 TTGACCACGTCAGCTGCTCA 62.027 55.000 9.47 1.61 43.69 4.26
785 1585 0.671781 ATTGACCACGTCAGCTGCTC 60.672 55.000 9.47 3.67 43.69 4.26
786 1586 0.671781 GATTGACCACGTCAGCTGCT 60.672 55.000 9.47 0.00 43.69 4.24
787 1587 0.950555 TGATTGACCACGTCAGCTGC 60.951 55.000 9.47 3.23 43.69 5.25
788 1588 1.395954 CATGATTGACCACGTCAGCTG 59.604 52.381 7.63 7.63 43.69 4.24
789 1589 1.676916 CCATGATTGACCACGTCAGCT 60.677 52.381 0.00 0.00 43.69 4.24
790 1590 0.729116 CCATGATTGACCACGTCAGC 59.271 55.000 0.00 0.00 43.69 4.26
791 1591 1.733912 CACCATGATTGACCACGTCAG 59.266 52.381 0.00 0.00 43.69 3.51
792 1592 1.610363 CCACCATGATTGACCACGTCA 60.610 52.381 0.00 0.00 41.09 4.35
793 1593 1.086696 CCACCATGATTGACCACGTC 58.913 55.000 0.00 0.00 0.00 4.34
925 1733 1.154150 GCGTCCAATGCTTCAGTGC 60.154 57.895 0.00 0.00 0.00 4.40
1119 1930 1.019278 CGTGCGTAAAGGGTGCTGAT 61.019 55.000 0.00 0.00 0.00 2.90
1177 2010 5.581605 ACGCTTATGAAACCTGCAATATTG 58.418 37.500 11.27 11.27 0.00 1.90
1178 2011 5.835113 ACGCTTATGAAACCTGCAATATT 57.165 34.783 0.00 0.00 0.00 1.28
1179 2012 6.202954 GTCTACGCTTATGAAACCTGCAATAT 59.797 38.462 0.00 0.00 0.00 1.28
1267 2117 1.044611 TATCATCGATGAACCCGGCA 58.955 50.000 30.41 6.91 40.69 5.69
1303 2153 4.265073 GAATGTACTGGCCAGAGATGTTT 58.735 43.478 39.19 21.84 0.00 2.83
1312 2162 1.216977 CGGTCGAATGTACTGGCCA 59.783 57.895 4.71 4.71 0.00 5.36
1411 2267 1.582968 GACGAGGTACTTGCGACCA 59.417 57.895 8.96 0.00 45.68 4.02
1432 2288 1.001974 TCGCCATATAAGAATGCCGCT 59.998 47.619 0.00 0.00 28.49 5.52
1444 2300 1.285023 GCCGTCGTAGTCGCCATAT 59.715 57.895 0.00 0.00 37.81 1.78
1674 2534 0.322816 GAGGCCCTGCATCAAGTTCA 60.323 55.000 0.00 0.00 39.28 3.18
1683 2543 4.020617 CAAGGACGAGGCCCTGCA 62.021 66.667 0.00 0.00 33.55 4.41
1730 2590 3.254060 CTCACCTAACAATGTCGGTCAG 58.746 50.000 4.61 0.00 0.00 3.51
1741 2601 4.081642 CCGAGATCTTTTCCTCACCTAACA 60.082 45.833 0.00 0.00 0.00 2.41
1764 2624 3.017442 GACAGGAGGGAATTAAACAGCC 58.983 50.000 0.00 0.00 0.00 4.85
1806 2666 4.981794 AGCGCGCTATTTAAAACTTTGAT 58.018 34.783 35.79 0.63 0.00 2.57
1809 2669 4.791676 GCTTAGCGCGCTATTTAAAACTTT 59.208 37.500 38.51 13.72 0.00 2.66
1810 2670 4.142773 TGCTTAGCGCGCTATTTAAAACTT 60.143 37.500 38.51 13.94 43.27 2.66
1811 2671 3.372822 TGCTTAGCGCGCTATTTAAAACT 59.627 39.130 38.51 14.50 43.27 2.66
1812 2672 3.676540 TGCTTAGCGCGCTATTTAAAAC 58.323 40.909 38.51 22.00 43.27 2.43
1813 2673 4.272504 AGATGCTTAGCGCGCTATTTAAAA 59.727 37.500 38.51 24.43 43.27 1.52
1814 2674 3.807622 AGATGCTTAGCGCGCTATTTAAA 59.192 39.130 38.51 25.16 43.27 1.52
1815 2675 3.390135 AGATGCTTAGCGCGCTATTTAA 58.610 40.909 38.51 25.53 43.27 1.52
1818 2678 1.871080 AAGATGCTTAGCGCGCTATT 58.129 45.000 38.51 26.01 43.27 1.73
1820 2680 1.930817 GCTAAGATGCTTAGCGCGCTA 60.931 52.381 35.48 35.48 43.27 4.26
1821 2681 1.218230 GCTAAGATGCTTAGCGCGCT 61.218 55.000 38.01 38.01 43.27 5.92
1822 2682 1.202816 GCTAAGATGCTTAGCGCGC 59.797 57.895 26.66 26.66 43.27 6.86
1827 2687 2.386249 GTCCGACGCTAAGATGCTTAG 58.614 52.381 9.30 9.30 0.00 2.18
1828 2688 1.066605 GGTCCGACGCTAAGATGCTTA 59.933 52.381 0.00 0.00 0.00 3.09
1829 2689 0.179108 GGTCCGACGCTAAGATGCTT 60.179 55.000 0.00 0.00 0.00 3.91
1830 2690 1.038130 AGGTCCGACGCTAAGATGCT 61.038 55.000 0.00 0.00 0.00 3.79
1832 2692 1.025812 AGAGGTCCGACGCTAAGATG 58.974 55.000 0.00 0.00 0.00 2.90
1834 2694 1.471684 GAAAGAGGTCCGACGCTAAGA 59.528 52.381 0.00 0.00 0.00 2.10
1835 2695 1.201647 TGAAAGAGGTCCGACGCTAAG 59.798 52.381 0.00 0.00 0.00 2.18
1836 2696 1.250328 TGAAAGAGGTCCGACGCTAA 58.750 50.000 0.00 0.00 0.00 3.09
1837 2697 1.250328 TTGAAAGAGGTCCGACGCTA 58.750 50.000 0.00 0.00 0.00 4.26
1838 2698 0.391597 TTTGAAAGAGGTCCGACGCT 59.608 50.000 0.00 0.00 0.00 5.07
1839 2699 1.128692 CATTTGAAAGAGGTCCGACGC 59.871 52.381 0.00 0.00 0.00 5.19
1840 2700 1.128692 GCATTTGAAAGAGGTCCGACG 59.871 52.381 0.00 0.00 0.00 5.12
1841 2701 2.427506 AGCATTTGAAAGAGGTCCGAC 58.572 47.619 0.00 0.00 0.00 4.79
1842 2702 2.859165 AGCATTTGAAAGAGGTCCGA 57.141 45.000 0.00 0.00 0.00 4.55
1843 2703 4.212214 GCTATAGCATTTGAAAGAGGTCCG 59.788 45.833 20.01 0.00 41.59 4.79
1844 2704 4.212214 CGCTATAGCATTTGAAAGAGGTCC 59.788 45.833 23.99 0.00 42.21 4.46
1845 2705 4.811557 ACGCTATAGCATTTGAAAGAGGTC 59.188 41.667 23.99 0.00 42.21 3.85
1846 2706 4.572389 CACGCTATAGCATTTGAAAGAGGT 59.428 41.667 23.99 6.60 42.21 3.85
1847 2707 4.553547 GCACGCTATAGCATTTGAAAGAGG 60.554 45.833 23.99 5.98 42.21 3.69
1848 2708 4.272018 AGCACGCTATAGCATTTGAAAGAG 59.728 41.667 23.99 6.48 42.21 2.85
1849 2709 4.191544 AGCACGCTATAGCATTTGAAAGA 58.808 39.130 23.99 0.00 42.21 2.52
1850 2710 4.542662 AGCACGCTATAGCATTTGAAAG 57.457 40.909 23.99 7.87 42.21 2.62
1851 2711 7.351414 CTATAGCACGCTATAGCATTTGAAA 57.649 36.000 25.42 9.51 46.26 2.69
1852 2712 6.951256 CTATAGCACGCTATAGCATTTGAA 57.049 37.500 25.42 9.81 46.26 2.69
1861 2721 1.400846 GCTCCGCTATAGCACGCTATA 59.599 52.381 23.99 15.99 42.21 1.31
1862 2722 0.171455 GCTCCGCTATAGCACGCTAT 59.829 55.000 23.99 15.45 42.21 2.97
1863 2723 0.889638 AGCTCCGCTATAGCACGCTA 60.890 55.000 23.99 0.39 42.62 4.26
1864 2724 0.889638 TAGCTCCGCTATAGCACGCT 60.890 55.000 25.78 25.78 42.62 5.07
1865 2725 1.579932 TAGCTCCGCTATAGCACGC 59.420 57.895 23.99 20.26 42.62 5.34
1873 2733 2.868196 CGCGCTATAGCTCCGCTA 59.132 61.111 21.98 0.00 45.55 4.26
1876 2736 0.179161 AATAGCGCGCTATAGCTCCG 60.179 55.000 43.81 22.32 43.44 4.63
1877 2737 1.997669 AAATAGCGCGCTATAGCTCC 58.002 50.000 43.81 10.26 43.44 4.70
1878 2738 5.511088 TTTTAAATAGCGCGCTATAGCTC 57.489 39.130 43.81 13.77 43.44 4.09
1879 2739 5.408604 ACATTTTAAATAGCGCGCTATAGCT 59.591 36.000 43.81 33.17 46.53 3.32
1880 2740 5.618561 ACATTTTAAATAGCGCGCTATAGC 58.381 37.500 43.81 15.09 38.20 2.97
1881 2741 7.586300 ACAAACATTTTAAATAGCGCGCTATAG 59.414 33.333 43.81 29.40 38.20 1.31
1882 2742 7.411274 ACAAACATTTTAAATAGCGCGCTATA 58.589 30.769 43.81 31.73 38.20 1.31
1883 2743 6.262601 ACAAACATTTTAAATAGCGCGCTAT 58.737 32.000 40.32 40.32 40.63 2.97
1884 2744 5.632959 ACAAACATTTTAAATAGCGCGCTA 58.367 33.333 39.72 39.72 0.00 4.26
1885 2745 4.481463 ACAAACATTTTAAATAGCGCGCT 58.519 34.783 38.01 38.01 0.00 5.92
1886 2746 4.816277 ACAAACATTTTAAATAGCGCGC 57.184 36.364 26.66 26.66 0.00 6.86
1887 2747 6.369326 TGAACAAACATTTTAAATAGCGCG 57.631 33.333 0.00 0.00 0.00 6.86
1888 2748 9.039500 CAAATGAACAAACATTTTAAATAGCGC 57.961 29.630 0.00 0.00 44.63 5.92
1896 2756 8.669243 GGTCCAAACAAATGAACAAACATTTTA 58.331 29.630 0.00 0.00 44.63 1.52
1897 2757 7.175641 TGGTCCAAACAAATGAACAAACATTTT 59.824 29.630 0.00 0.00 44.63 1.82
1898 2758 6.656693 TGGTCCAAACAAATGAACAAACATTT 59.343 30.769 0.00 0.00 46.85 2.32
1899 2759 6.176183 TGGTCCAAACAAATGAACAAACATT 58.824 32.000 0.00 0.00 41.43 2.71
1900 2760 5.738909 TGGTCCAAACAAATGAACAAACAT 58.261 33.333 0.00 0.00 0.00 2.71
1901 2761 5.152623 TGGTCCAAACAAATGAACAAACA 57.847 34.783 0.00 0.00 0.00 2.83
1902 2762 6.148645 ACTTTGGTCCAAACAAATGAACAAAC 59.851 34.615 13.26 0.00 39.91 2.93
1903 2763 6.234177 ACTTTGGTCCAAACAAATGAACAAA 58.766 32.000 13.26 0.00 41.86 2.83
1904 2764 5.799213 ACTTTGGTCCAAACAAATGAACAA 58.201 33.333 13.26 0.00 37.22 2.83
1905 2765 5.186797 AGACTTTGGTCCAAACAAATGAACA 59.813 36.000 13.26 0.00 43.05 3.18
1906 2766 5.660460 AGACTTTGGTCCAAACAAATGAAC 58.340 37.500 13.26 4.31 43.05 3.18
1907 2767 5.656416 AGAGACTTTGGTCCAAACAAATGAA 59.344 36.000 13.26 0.00 43.05 2.57
1908 2768 5.200483 AGAGACTTTGGTCCAAACAAATGA 58.800 37.500 13.26 0.00 43.05 2.57
1909 2769 5.520376 AGAGACTTTGGTCCAAACAAATG 57.480 39.130 13.26 6.01 43.05 2.32
1910 2770 6.239036 GCTAAGAGACTTTGGTCCAAACAAAT 60.239 38.462 13.26 0.00 43.05 2.32
1911 2771 5.067283 GCTAAGAGACTTTGGTCCAAACAAA 59.933 40.000 13.26 0.00 43.05 2.83
1912 2772 4.578928 GCTAAGAGACTTTGGTCCAAACAA 59.421 41.667 13.26 0.00 43.05 2.83
1913 2773 4.134563 GCTAAGAGACTTTGGTCCAAACA 58.865 43.478 13.26 0.00 43.05 2.83
1914 2774 3.186613 CGCTAAGAGACTTTGGTCCAAAC 59.813 47.826 13.26 4.96 43.05 2.93
1915 2775 3.399330 CGCTAAGAGACTTTGGTCCAAA 58.601 45.455 16.26 16.26 43.05 3.28
1916 2776 2.870435 GCGCTAAGAGACTTTGGTCCAA 60.870 50.000 0.00 0.00 43.05 3.53
1917 2777 1.337823 GCGCTAAGAGACTTTGGTCCA 60.338 52.381 0.00 0.00 43.05 4.02
1918 2778 1.337823 TGCGCTAAGAGACTTTGGTCC 60.338 52.381 9.73 0.00 43.05 4.46
1919 2779 2.080286 TGCGCTAAGAGACTTTGGTC 57.920 50.000 9.73 0.00 42.41 4.02
1920 2780 2.037251 TCTTGCGCTAAGAGACTTTGGT 59.963 45.455 9.73 0.00 40.43 3.67
1921 2781 2.413453 GTCTTGCGCTAAGAGACTTTGG 59.587 50.000 18.44 0.00 45.71 3.28
1922 2782 2.413453 GGTCTTGCGCTAAGAGACTTTG 59.587 50.000 22.91 0.00 45.71 2.77
1923 2783 2.300437 AGGTCTTGCGCTAAGAGACTTT 59.700 45.455 22.91 14.31 45.71 2.66
1924 2784 1.896465 AGGTCTTGCGCTAAGAGACTT 59.104 47.619 22.91 17.23 45.71 3.01
1925 2785 1.551452 AGGTCTTGCGCTAAGAGACT 58.449 50.000 22.91 18.83 45.71 3.24
1926 2786 2.371910 AAGGTCTTGCGCTAAGAGAC 57.628 50.000 18.44 18.59 45.71 3.36
1927 2787 3.067106 CAAAAGGTCTTGCGCTAAGAGA 58.933 45.455 18.44 9.99 45.71 3.10
1928 2788 2.808543 ACAAAAGGTCTTGCGCTAAGAG 59.191 45.455 18.44 10.73 45.71 2.85
1929 2789 2.846193 ACAAAAGGTCTTGCGCTAAGA 58.154 42.857 9.73 13.31 43.01 2.10
1930 2790 4.742438 TTACAAAAGGTCTTGCGCTAAG 57.258 40.909 9.73 11.02 37.76 2.18
1931 2791 4.553156 CGTTTACAAAAGGTCTTGCGCTAA 60.553 41.667 9.73 0.00 0.00 3.09
1932 2792 3.059461 CGTTTACAAAAGGTCTTGCGCTA 60.059 43.478 9.73 0.00 0.00 4.26
1933 2793 2.286772 CGTTTACAAAAGGTCTTGCGCT 60.287 45.455 9.73 0.00 0.00 5.92
1934 2794 2.041244 CGTTTACAAAAGGTCTTGCGC 58.959 47.619 0.00 0.00 0.00 6.09
1935 2795 2.041244 GCGTTTACAAAAGGTCTTGCG 58.959 47.619 0.00 0.00 0.00 4.85
1936 2796 3.349488 AGCGTTTACAAAAGGTCTTGC 57.651 42.857 0.00 0.00 0.00 4.01
1937 2797 6.248631 GCTATAGCGTTTACAAAAGGTCTTG 58.751 40.000 9.40 0.00 31.10 3.02
1938 2798 6.418585 GCTATAGCGTTTACAAAAGGTCTT 57.581 37.500 9.40 0.00 31.10 3.01
1956 2816 1.400846 GCTCCGCTATAGCACGCTATA 59.599 52.381 23.99 15.99 42.21 1.31
1957 2817 0.171455 GCTCCGCTATAGCACGCTAT 59.829 55.000 23.99 15.45 42.21 2.97
1958 2818 0.889638 AGCTCCGCTATAGCACGCTA 60.890 55.000 23.99 0.39 42.62 4.26
1959 2819 0.889638 TAGCTCCGCTATAGCACGCT 60.890 55.000 25.78 25.78 42.62 5.07
1960 2820 1.579932 TAGCTCCGCTATAGCACGC 59.420 57.895 23.99 20.26 42.62 5.34
1968 2828 2.341101 GCCCGCTATAGCTCCGCTA 61.341 63.158 21.98 0.00 45.55 4.26
1969 2829 2.766306 TAGCCCGCTATAGCTCCGCT 62.766 60.000 24.41 24.41 43.41 5.52
1970 2830 1.668101 ATAGCCCGCTATAGCTCCGC 61.668 60.000 21.98 18.46 40.56 5.54
1971 2831 0.818296 AATAGCCCGCTATAGCTCCG 59.182 55.000 21.98 10.15 40.56 4.63
1972 2832 2.233922 TCAAATAGCCCGCTATAGCTCC 59.766 50.000 21.98 10.06 40.56 4.70
1973 2833 3.594603 TCAAATAGCCCGCTATAGCTC 57.405 47.619 21.98 11.04 40.56 4.09
1974 2834 4.065789 GTTTCAAATAGCCCGCTATAGCT 58.934 43.478 21.98 6.31 43.20 3.32
1975 2835 3.813166 TGTTTCAAATAGCCCGCTATAGC 59.187 43.478 15.09 15.09 38.20 2.97
1976 2836 5.050091 CACTGTTTCAAATAGCCCGCTATAG 60.050 44.000 9.56 6.26 38.20 1.31
1977 2837 4.814234 CACTGTTTCAAATAGCCCGCTATA 59.186 41.667 9.56 0.00 38.20 1.31
1978 2838 3.627577 CACTGTTTCAAATAGCCCGCTAT 59.372 43.478 3.31 3.31 40.63 2.97
1979 2839 3.006940 CACTGTTTCAAATAGCCCGCTA 58.993 45.455 0.00 0.00 0.00 4.26
1980 2840 1.812571 CACTGTTTCAAATAGCCCGCT 59.187 47.619 0.00 0.00 0.00 5.52
1981 2841 1.135402 CCACTGTTTCAAATAGCCCGC 60.135 52.381 0.00 0.00 0.00 6.13
1982 2842 2.159382 ACCACTGTTTCAAATAGCCCG 58.841 47.619 0.00 0.00 0.00 6.13
1983 2843 4.600692 AAACCACTGTTTCAAATAGCCC 57.399 40.909 0.00 0.00 40.68 5.19
1984 2844 6.079424 TGTAAACCACTGTTTCAAATAGCC 57.921 37.500 0.00 0.00 43.50 3.93
1985 2845 8.512138 AGTATGTAAACCACTGTTTCAAATAGC 58.488 33.333 0.00 0.00 43.50 2.97
1989 2849 9.398538 ACTTAGTATGTAAACCACTGTTTCAAA 57.601 29.630 0.00 0.00 43.50 2.69
1990 2850 8.967664 ACTTAGTATGTAAACCACTGTTTCAA 57.032 30.769 0.00 0.00 43.50 2.69
1991 2851 8.967664 AACTTAGTATGTAAACCACTGTTTCA 57.032 30.769 0.00 0.00 43.50 2.69
2010 2870 8.827177 TTGTGTCTGTCCAGTTAATAACTTAG 57.173 34.615 2.41 0.00 40.46 2.18
2011 2871 9.048446 GTTTGTGTCTGTCCAGTTAATAACTTA 57.952 33.333 2.41 0.00 40.46 2.24
2018 2878 4.839121 AGTGTTTGTGTCTGTCCAGTTAA 58.161 39.130 0.00 0.00 0.00 2.01
2020 2880 3.350219 AGTGTTTGTGTCTGTCCAGTT 57.650 42.857 0.00 0.00 0.00 3.16
2112 2980 2.425668 TGCTTCGTCGTTGATATCTCCA 59.574 45.455 3.98 0.00 0.00 3.86
2320 3191 1.577468 TGTTGATGTCAAACTCGCGT 58.423 45.000 5.77 0.00 37.63 6.01
2324 3195 4.466828 CCGTTGATGTTGATGTCAAACTC 58.533 43.478 0.00 0.00 37.63 3.01
2400 3274 2.647299 TCCTGGTAGGGCTTTTCATTGA 59.353 45.455 0.00 0.00 35.59 2.57
2418 3292 3.446516 GGAGATGTTGTAGTTACCGTCCT 59.553 47.826 0.00 0.00 0.00 3.85
2565 4892 7.388776 GGAAATATCAGCTAACTCATGCATGTA 59.611 37.037 25.43 10.58 0.00 2.29
2719 5055 3.275999 ACTTTGTAGACGTTGCCAAGTT 58.724 40.909 0.00 0.00 25.38 2.66
2720 5056 2.914059 ACTTTGTAGACGTTGCCAAGT 58.086 42.857 0.00 0.00 0.00 3.16
2721 5057 3.963383 AACTTTGTAGACGTTGCCAAG 57.037 42.857 0.00 0.00 0.00 3.61
2724 5060 3.064271 TGTCAAACTTTGTAGACGTTGCC 59.936 43.478 1.44 0.00 33.83 4.52
2725 5061 4.026407 GTGTCAAACTTTGTAGACGTTGC 58.974 43.478 1.44 0.00 33.83 4.17
2795 5137 4.282496 ACACAACCCCATGTTCTTAACAA 58.718 39.130 0.00 0.00 45.86 2.83
2802 5144 2.293399 GAGACAACACAACCCCATGTTC 59.707 50.000 0.00 0.00 36.92 3.18
2805 5147 1.881973 CAGAGACAACACAACCCCATG 59.118 52.381 0.00 0.00 0.00 3.66
2837 5179 3.480505 ACTACAGTTAACCACACCCAC 57.519 47.619 0.88 0.00 0.00 4.61
2864 5206 5.055642 ACTTCGTCTTGATCGTTGTCATA 57.944 39.130 0.00 0.00 0.00 2.15
2867 5209 5.093457 TGATACTTCGTCTTGATCGTTGTC 58.907 41.667 0.00 0.00 0.00 3.18
2870 5212 5.516696 CACATGATACTTCGTCTTGATCGTT 59.483 40.000 0.00 0.00 0.00 3.85
2880 5222 5.186021 AGTTCTTCTCCACATGATACTTCGT 59.814 40.000 0.00 0.00 0.00 3.85
2895 5237 2.355209 GGTCACCCATCCAGTTCTTCTC 60.355 54.545 0.00 0.00 0.00 2.87
2921 5263 0.621571 AGGCCATAGTCTTGGGAGCA 60.622 55.000 5.01 0.00 37.24 4.26
2922 5264 0.179034 CAGGCCATAGTCTTGGGAGC 60.179 60.000 5.01 0.00 37.24 4.70
2968 5310 0.110104 GATCCTTGGAGGGATGCCAG 59.890 60.000 5.86 0.00 45.18 4.85
2974 5316 1.207791 GCTTCTGATCCTTGGAGGGA 58.792 55.000 0.00 0.00 39.95 4.20
3161 5507 1.852895 CTTTAGATCCGCGAAAGACGG 59.147 52.381 8.23 0.00 46.94 4.79
3173 5519 2.433970 AGTGCTGGAGAGCCTTTAGATC 59.566 50.000 0.00 0.00 45.57 2.75
3191 5537 8.553459 AGATCCAAACTCTAAACATACAAGTG 57.447 34.615 0.00 0.00 0.00 3.16
3203 5549 3.846588 AGGCCAAAGAGATCCAAACTCTA 59.153 43.478 5.01 0.00 42.85 2.43
3336 5692 8.038944 ACAAAGGTAATTGCGAAAGAGTATCTA 58.961 33.333 0.00 0.00 38.04 1.98
3451 5808 6.070596 TGAGCTGATTTCCTGACAAATCTCTA 60.071 38.462 0.00 0.00 41.54 2.43
3552 5909 2.285488 GCAAGACGAATCGGGAGAATTC 59.715 50.000 7.80 0.00 45.37 2.17
3628 5986 3.584834 GTGCAAAGGTTTGAGTTGTTGT 58.415 40.909 6.63 0.00 40.55 3.32
3690 6048 1.384525 GCACCAACGTATATGGGCAA 58.615 50.000 9.49 0.00 42.48 4.52
3720 6078 5.047731 CCACTGATACTATCACCACGATGAT 60.048 44.000 0.00 0.00 42.13 2.45
3893 6253 5.298276 TCTCGTTTCATTTTGTGGCTTTACT 59.702 36.000 0.00 0.00 0.00 2.24
4320 6689 3.502123 TTGAACCTGAACAAGTAGGGG 57.498 47.619 0.00 0.00 38.42 4.79
4402 6778 2.559231 TCGTAGACAAGTGCCATGTGTA 59.441 45.455 0.00 0.00 0.00 2.90
4403 6779 1.343142 TCGTAGACAAGTGCCATGTGT 59.657 47.619 0.00 0.00 0.00 3.72
4493 6869 0.179020 CACCAGTCACCTTCCAGCAA 60.179 55.000 0.00 0.00 0.00 3.91
4498 6874 0.389948 CGCTACACCAGTCACCTTCC 60.390 60.000 0.00 0.00 0.00 3.46
4527 6974 6.127225 ACAACATGTACACTCTATCAGCTCAT 60.127 38.462 0.00 0.00 0.00 2.90
4577 7024 1.745087 GCCGACATTGTGACCAATCAT 59.255 47.619 0.00 0.00 39.28 2.45
4719 7175 4.870123 TGCCAATTCTGCATTTAAGTGT 57.130 36.364 0.00 0.00 32.85 3.55
4732 7188 2.955607 GCAAAAGCAGTTGCCAATTC 57.044 45.000 12.10 0.00 46.69 2.17
4788 7244 6.274200 CCCCTTATGTAGGTACTCTAGTCCTA 59.726 46.154 0.00 4.97 43.07 2.94
4795 7251 3.306613 GCACCCCTTATGTAGGTACTCT 58.693 50.000 0.00 0.00 43.07 3.24
4852 7308 6.293955 CCAACCTCGTGTTCAATAAGATGTTT 60.294 38.462 0.00 0.00 34.00 2.83
4991 7447 1.599576 GAGCAGGGTGGAAGGAGTC 59.400 63.158 0.00 0.00 0.00 3.36
5032 7488 3.618507 GCTCCACTTAACACTCAGAGCAT 60.619 47.826 0.00 0.00 43.62 3.79
5043 7499 6.447162 AGCAAATGTTTTAGCTCCACTTAAC 58.553 36.000 0.00 0.00 30.05 2.01
5046 7502 5.535753 AAGCAAATGTTTTAGCTCCACTT 57.464 34.783 0.00 0.00 36.07 3.16
5047 7503 5.183904 CCTAAGCAAATGTTTTAGCTCCACT 59.816 40.000 0.00 0.00 36.07 4.00
5056 7512 5.830991 TGTCTGGTACCTAAGCAAATGTTTT 59.169 36.000 14.36 0.00 34.56 2.43
5122 7578 0.173029 CAAGCACCAACAGCACAACA 59.827 50.000 0.00 0.00 0.00 3.33
5125 7581 0.679321 TGACAAGCACCAACAGCACA 60.679 50.000 0.00 0.00 0.00 4.57
5205 7661 0.098200 GTTGCCTTTCGATAACCGCC 59.902 55.000 0.00 0.00 38.37 6.13
5254 7710 2.565391 ACTATTGATGTCGTGGTCACCA 59.435 45.455 0.00 0.00 0.00 4.17
5374 7830 0.741915 CGTGGTCCTCCTCTAGCTTC 59.258 60.000 0.00 0.00 34.23 3.86
5461 7917 4.401837 GTGGACTGGTTAGTAGGGTAAGAG 59.598 50.000 0.00 0.00 37.25 2.85
5497 7953 3.255149 CCTTCTCAAATGAAGTGCTGCTT 59.745 43.478 0.00 0.00 41.17 3.91
5597 8054 4.689612 ACATAGATAACCAGTTGGCGAT 57.310 40.909 0.00 0.00 39.32 4.58
5703 8162 8.779303 CAAGTTACTGGTTGAACATACAATGTA 58.221 33.333 0.00 0.00 44.07 2.29
5705 8164 7.648142 ACAAGTTACTGGTTGAACATACAATG 58.352 34.615 0.00 0.00 32.36 2.82
5766 8226 9.956720 AAGATCACTTGTATCTTTTGACTTTTG 57.043 29.630 0.00 0.00 40.03 2.44
5767 8227 9.956720 CAAGATCACTTGTATCTTTTGACTTTT 57.043 29.630 0.00 0.00 45.73 2.27
5796 9107 6.196353 ACAAAAAGAAATTCGATCAACACACG 59.804 34.615 0.00 0.00 0.00 4.49
5852 9163 2.706555 TATCCAACTGCGAGATAGCG 57.293 50.000 0.00 0.00 40.67 4.26
5854 9165 4.051922 GTGGTTATCCAACTGCGAGATAG 58.948 47.826 0.00 0.00 46.15 2.08
5879 9191 9.890629 AGATATGTAAATTAGCTTTGTCTGTGA 57.109 29.630 0.00 0.00 0.00 3.58
5907 9288 6.269077 TGACTGGTCTTAGAAATGAGTTGGTA 59.731 38.462 2.38 0.00 0.00 3.25
5926 9307 0.462581 ATGCCAGCATACGTGACTGG 60.463 55.000 22.16 22.16 45.00 4.00
5938 9376 5.581874 AGCAATTTAAATGTACAATGCCAGC 59.418 36.000 13.90 0.00 0.00 4.85
5939 9377 7.599630 AAGCAATTTAAATGTACAATGCCAG 57.400 32.000 13.90 0.00 0.00 4.85
5955 9393 9.793252 CTTGTGCTCTTGTATATAAAGCAATTT 57.207 29.630 15.32 0.00 43.91 1.82
5956 9394 7.917505 GCTTGTGCTCTTGTATATAAAGCAATT 59.082 33.333 15.32 0.00 43.91 2.32
6004 9452 4.990426 ACATGTAATTTGCTCTTTGTTGGC 59.010 37.500 0.00 0.00 0.00 4.52
6033 9481 3.314553 CGTCAACTCTGTCGTTGGTTAT 58.685 45.455 10.82 0.00 43.36 1.89
6055 9503 2.123812 AGTCCGGAGTCGATCCCC 60.124 66.667 3.06 0.00 46.50 4.81
6083 9550 1.752694 GGGCGCCCTTTAATCAGCA 60.753 57.895 38.76 0.00 0.00 4.41
6117 9584 3.712907 GGCTAACCGGCTGGGACA 61.713 66.667 18.00 0.00 40.75 4.02
6139 9606 4.210447 CGCACAAAAGTTGAGGCG 57.790 55.556 13.85 13.85 45.32 5.52
6155 10038 0.321564 TTGGGACCATGCTTGAGACG 60.322 55.000 0.22 0.00 0.00 4.18
6185 10072 2.724977 TACAGTTGAGACTTGAGGCG 57.275 50.000 0.00 0.00 32.54 5.52
6203 10090 3.635433 GTCCGCAAGACACGCTATA 57.365 52.632 0.00 0.00 45.55 1.31
6224 10111 2.719705 TCCTAACCATCCAACCAAAGGT 59.280 45.455 0.00 0.00 37.65 3.50
6228 10115 2.307686 GTCCTCCTAACCATCCAACCAA 59.692 50.000 0.00 0.00 0.00 3.67
6235 10122 2.093447 CACCACTGTCCTCCTAACCATC 60.093 54.545 0.00 0.00 0.00 3.51
6256 10143 1.973812 GCAGCTGGGGAGTGGAAAC 60.974 63.158 17.12 0.00 0.00 2.78
6258 10145 3.650950 GGCAGCTGGGGAGTGGAA 61.651 66.667 17.12 0.00 0.00 3.53
6275 10162 1.196104 TAGGACTTGAACCCCGGTGG 61.196 60.000 0.00 3.72 41.37 4.61
6276 10163 0.688487 TTAGGACTTGAACCCCGGTG 59.312 55.000 0.00 0.00 0.00 4.94
6277 10164 1.437397 TTTAGGACTTGAACCCCGGT 58.563 50.000 0.00 0.00 0.00 5.28
6278 10165 2.801077 ATTTAGGACTTGAACCCCGG 57.199 50.000 0.00 0.00 0.00 5.73
6279 10166 4.076394 TCAAATTTAGGACTTGAACCCCG 58.924 43.478 0.00 0.00 0.00 5.73
6280 10167 4.082949 CGTCAAATTTAGGACTTGAACCCC 60.083 45.833 6.98 0.00 31.21 4.95
6292 10179 5.141568 CGTAAACACCCACGTCAAATTTAG 58.858 41.667 0.00 0.00 33.56 1.85
6295 10182 3.612472 CGTAAACACCCACGTCAAATT 57.388 42.857 0.00 0.00 33.56 1.82
6303 10190 5.927954 TCAGAAATAACGTAAACACCCAC 57.072 39.130 0.00 0.00 0.00 4.61
6305 10192 9.896263 TTAAATTCAGAAATAACGTAAACACCC 57.104 29.630 0.00 0.00 0.00 4.61
6322 10209 9.143631 CACCTCAAAAGCCTAAATTAAATTCAG 57.856 33.333 0.00 0.00 0.00 3.02
6323 10210 7.602265 GCACCTCAAAAGCCTAAATTAAATTCA 59.398 33.333 0.00 0.00 0.00 2.57
6325 10212 7.679783 AGCACCTCAAAAGCCTAAATTAAATT 58.320 30.769 0.00 0.00 0.00 1.82
6331 10218 3.766545 TGAGCACCTCAAAAGCCTAAAT 58.233 40.909 0.00 0.00 37.57 1.40
6334 10221 4.164030 TCATATGAGCACCTCAAAAGCCTA 59.836 41.667 0.00 0.00 44.04 3.93
6341 10228 4.660303 ACCCTATTCATATGAGCACCTCAA 59.340 41.667 5.39 0.00 44.04 3.02
6349 10236 2.738846 GTGCGCACCCTATTCATATGAG 59.261 50.000 30.12 0.00 0.00 2.90
6355 10242 0.035534 ATGTGTGCGCACCCTATTCA 60.036 50.000 35.72 23.09 44.65 2.57
6357 10244 1.656818 GCATGTGTGCGCACCCTATT 61.657 55.000 35.72 14.61 44.65 1.73
6367 10254 4.491593 TCACCCTATGATTGCATGTGTGC 61.492 47.826 0.00 0.00 41.45 4.57
6370 10257 3.314357 CACTCACCCTATGATTGCATGTG 59.686 47.826 0.00 0.00 36.48 3.21
6371 10258 3.054139 ACACTCACCCTATGATTGCATGT 60.054 43.478 0.00 0.00 40.75 3.21
6372 10259 3.548770 ACACTCACCCTATGATTGCATG 58.451 45.455 0.00 0.00 40.75 4.06
6373 10260 3.939740 ACACTCACCCTATGATTGCAT 57.060 42.857 0.00 0.00 40.75 3.96
6378 10265 4.410228 ACAAGCATACACTCACCCTATGAT 59.590 41.667 0.00 0.00 36.48 2.45
6396 10284 4.931601 TCAGAGTCAATCACATACACAAGC 59.068 41.667 0.00 0.00 0.00 4.01
6400 10288 6.974932 ACAATCAGAGTCAATCACATACAC 57.025 37.500 0.00 0.00 0.00 2.90
6401 10289 6.751888 CGTACAATCAGAGTCAATCACATACA 59.248 38.462 0.00 0.00 0.00 2.29
6406 10294 4.263209 CGACGTACAATCAGAGTCAATCAC 59.737 45.833 0.00 0.00 32.57 3.06
6410 10298 3.004002 ACACGACGTACAATCAGAGTCAA 59.996 43.478 0.00 0.00 32.57 3.18
6411 10299 2.551032 ACACGACGTACAATCAGAGTCA 59.449 45.455 0.00 0.00 32.57 3.41
6416 10304 3.487942 TGACAAACACGACGTACAATCAG 59.512 43.478 0.00 0.00 0.00 2.90
6426 10314 2.639751 GATGCACTTGACAAACACGAC 58.360 47.619 0.00 0.00 0.00 4.34
6427 10315 1.260297 CGATGCACTTGACAAACACGA 59.740 47.619 0.00 0.00 0.00 4.35
6428 10316 1.003972 ACGATGCACTTGACAAACACG 60.004 47.619 0.00 0.00 0.00 4.49
6510 10436 2.426024 TGGCATTAGTAGACGACTGACC 59.574 50.000 0.00 0.00 39.39 4.02
6527 10453 0.034960 TTATTAGTGCGGCCTTGGCA 60.035 50.000 14.04 0.00 38.25 4.92
6530 10456 2.297701 ACCATTATTAGTGCGGCCTTG 58.702 47.619 0.00 0.00 0.00 3.61
6553 10479 2.256461 GCCGCTGGTTGCAAGAAG 59.744 61.111 0.00 1.06 43.06 2.85
6554 10480 2.518112 TGCCGCTGGTTGCAAGAA 60.518 55.556 0.00 0.00 43.06 2.52
6555 10481 2.979676 CTGCCGCTGGTTGCAAGA 60.980 61.111 0.00 0.00 43.06 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.