Multiple sequence alignment - TraesCS1B01G358600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G358600 chr1B 100.000 6586 0 0 1 6586 588149790 588156375 0.000000e+00 12163.0
1 TraesCS1B01G358600 chr1B 77.331 2188 431 41 3326 5472 587991121 587993284 0.000000e+00 1232.0
2 TraesCS1B01G358600 chr1B 79.562 959 144 35 876 1814 588002679 588003605 7.200000e-179 638.0
3 TraesCS1B01G358600 chr1B 83.784 407 34 18 508 894 588001904 588002298 2.260000e-94 357.0
4 TraesCS1B01G358600 chr1B 73.324 731 175 18 4883 5600 588233417 588234140 1.100000e-62 252.0
5 TraesCS1B01G358600 chr1B 87.050 139 17 1 4528 4666 19050423 19050560 8.840000e-34 156.0
6 TraesCS1B01G358600 chr1B 80.905 199 30 5 4495 4686 622703767 622703570 4.110000e-32 150.0
7 TraesCS1B01G358600 chr1B 88.889 81 9 0 568 648 588143200 588143280 4.200000e-17 100.0
8 TraesCS1B01G358600 chr1D 93.490 2888 149 21 3119 5994 434369422 434372282 0.000000e+00 4255.0
9 TraesCS1B01G358600 chr1D 93.894 1818 98 12 9 1823 434366082 434367889 0.000000e+00 2730.0
10 TraesCS1B01G358600 chr1D 96.272 617 18 4 1818 2432 434368576 434369189 0.000000e+00 1007.0
11 TraesCS1B01G358600 chr1D 76.520 1891 366 49 3125 4972 434337237 434339092 0.000000e+00 961.0
12 TraesCS1B01G358600 chr1D 77.587 1633 325 29 3867 5480 434284587 434286197 0.000000e+00 950.0
13 TraesCS1B01G358600 chr1D 93.431 411 25 2 5993 6402 434372596 434373005 5.650000e-170 608.0
14 TraesCS1B01G358600 chr1D 79.688 512 87 13 3326 3823 434283809 434284317 2.920000e-93 353.0
15 TraesCS1B01G358600 chr1D 81.472 394 44 18 508 894 434320645 434321016 4.990000e-76 296.0
16 TraesCS1B01G358600 chr1D 77.011 522 111 8 4886 5401 434610109 434609591 2.320000e-74 291.0
17 TraesCS1B01G358600 chr1D 90.654 214 18 2 878 1091 434321420 434321631 3.890000e-72 283.0
18 TraesCS1B01G358600 chr1D 75.000 632 140 12 4777 5399 433946567 433947189 6.510000e-70 276.0
19 TraesCS1B01G358600 chr1D 75.912 548 117 7 1240 1778 434613982 434613441 3.920000e-67 267.0
20 TraesCS1B01G358600 chr1D 74.338 717 138 35 3139 3829 433923285 433923981 5.060000e-66 263.0
21 TraesCS1B01G358600 chr1D 89.441 161 17 0 579 739 434365410 434365570 3.110000e-48 204.0
22 TraesCS1B01G358600 chr1D 84.211 209 18 8 6393 6586 434373182 434373390 8.720000e-44 189.0
23 TraesCS1B01G358600 chr1D 94.495 109 6 0 984 1092 434281806 434281914 1.140000e-37 169.0
24 TraesCS1B01G358600 chr1D 75.600 250 53 4 1911 2159 434282833 434283075 4.170000e-22 117.0
25 TraesCS1B01G358600 chr1A 88.313 2584 252 27 3119 5684 532487719 532490270 0.000000e+00 3053.0
26 TraesCS1B01G358600 chr1A 77.762 2181 425 46 3326 5472 532477056 532479210 0.000000e+00 1286.0
27 TraesCS1B01G358600 chr1A 89.956 687 52 10 1208 1886 532483201 532483878 0.000000e+00 870.0
28 TraesCS1B01G358600 chr1A 88.807 545 48 6 1888 2419 532486890 532487434 0.000000e+00 656.0
29 TraesCS1B01G358600 chr1A 76.840 557 105 15 1235 1777 532511468 532512014 6.460000e-75 292.0
30 TraesCS1B01G358600 chr1A 74.140 727 166 17 4886 5598 532532751 532533469 1.400000e-71 281.0
31 TraesCS1B01G358600 chr1A 82.866 321 39 12 852 1165 532482884 532483195 2.340000e-69 274.0
32 TraesCS1B01G358600 chr1A 84.375 192 28 2 5854 6044 532503832 532504022 3.140000e-43 187.0
33 TraesCS1B01G358600 chr1A 73.045 486 107 20 1237 1710 532774111 532773638 4.110000e-32 150.0
34 TraesCS1B01G358600 chr1A 75.502 249 53 4 1912 2159 532458736 532458977 1.500000e-21 115.0
35 TraesCS1B01G358600 chr7B 77.748 1492 280 39 4119 5584 15797588 15799053 0.000000e+00 869.0
36 TraesCS1B01G358600 chr6B 99.147 469 3 1 2428 2895 30418446 30418914 0.000000e+00 843.0
37 TraesCS1B01G358600 chr6B 95.238 42 1 1 6125 6165 583189274 583189233 1.530000e-06 65.8
38 TraesCS1B01G358600 chr3B 99.142 466 4 0 2430 2895 39530677 39530212 0.000000e+00 839.0
39 TraesCS1B01G358600 chr3B 99.140 465 4 0 2430 2894 755285149 755285613 0.000000e+00 837.0
40 TraesCS1B01G358600 chr4B 99.138 464 3 1 2430 2893 662008051 662008513 0.000000e+00 833.0
41 TraesCS1B01G358600 chr4B 98.301 471 6 2 2431 2901 642535345 642534877 0.000000e+00 824.0
42 TraesCS1B01G358600 chr4B 98.504 468 5 2 2430 2895 662016273 662015806 0.000000e+00 824.0
43 TraesCS1B01G358600 chr4A 98.712 466 6 0 2430 2895 689222274 689221809 0.000000e+00 828.0
44 TraesCS1B01G358600 chr4A 98.710 465 6 0 2431 2895 731665506 731665970 0.000000e+00 826.0
45 TraesCS1B01G358600 chr2B 98.498 466 7 0 2431 2896 14422017 14422482 0.000000e+00 822.0
46 TraesCS1B01G358600 chr6A 88.235 51 4 2 6123 6173 597023481 597023529 7.130000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G358600 chr1B 588149790 588156375 6585 False 12163.000000 12163 100.000000 1 6586 1 chr1B.!!$F4 6585
1 TraesCS1B01G358600 chr1B 587991121 587993284 2163 False 1232.000000 1232 77.331000 3326 5472 1 chr1B.!!$F2 2146
2 TraesCS1B01G358600 chr1B 588001904 588003605 1701 False 497.500000 638 81.673000 508 1814 2 chr1B.!!$F6 1306
3 TraesCS1B01G358600 chr1B 588233417 588234140 723 False 252.000000 252 73.324000 4883 5600 1 chr1B.!!$F5 717
4 TraesCS1B01G358600 chr1D 434365410 434373390 7980 False 1498.833333 4255 91.789833 9 6586 6 chr1D.!!$F6 6577
5 TraesCS1B01G358600 chr1D 434337237 434339092 1855 False 961.000000 961 76.520000 3125 4972 1 chr1D.!!$F3 1847
6 TraesCS1B01G358600 chr1D 434281806 434286197 4391 False 397.250000 950 81.842500 984 5480 4 chr1D.!!$F4 4496
7 TraesCS1B01G358600 chr1D 434320645 434321631 986 False 289.500000 296 86.063000 508 1091 2 chr1D.!!$F5 583
8 TraesCS1B01G358600 chr1D 434609591 434613982 4391 True 279.000000 291 76.461500 1240 5401 2 chr1D.!!$R1 4161
9 TraesCS1B01G358600 chr1D 433946567 433947189 622 False 276.000000 276 75.000000 4777 5399 1 chr1D.!!$F2 622
10 TraesCS1B01G358600 chr1D 433923285 433923981 696 False 263.000000 263 74.338000 3139 3829 1 chr1D.!!$F1 690
11 TraesCS1B01G358600 chr1A 532477056 532490270 13214 False 1227.800000 3053 85.540800 852 5684 5 chr1A.!!$F5 4832
12 TraesCS1B01G358600 chr1A 532511468 532512014 546 False 292.000000 292 76.840000 1235 1777 1 chr1A.!!$F3 542
13 TraesCS1B01G358600 chr1A 532532751 532533469 718 False 281.000000 281 74.140000 4886 5598 1 chr1A.!!$F4 712
14 TraesCS1B01G358600 chr7B 15797588 15799053 1465 False 869.000000 869 77.748000 4119 5584 1 chr7B.!!$F1 1465

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
308 973 0.398381 GCCCTGTCTCCTCAGAGGAT 60.398 60.0 20.22 0.0 44.81 3.24 F
1197 6623 0.327924 TGTGCCATCGGGTCATCTTT 59.672 50.0 0.00 0.0 36.17 2.52 F
2422 11746 0.611200 TCCCAGGACGGTATGTTGTG 59.389 55.0 0.00 0.0 0.00 3.33 F
3379 12855 0.038166 TGGCCAAGAGGGTGACATTC 59.962 55.0 0.61 0.0 39.65 2.67 F
4028 14233 0.255890 ATAGTGGTCATGGTGGTGGC 59.744 55.0 0.00 0.0 0.00 5.01 F
5214 16007 0.467474 CAGCATCATCCAGTGGGCAT 60.467 55.0 9.92 0.0 32.99 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1572 7046 0.994247 ATGGGCTGGAGATGTTCACA 59.006 50.000 0.00 0.00 0.00 3.58 R
2809 12133 0.179156 GATCCGTGCAGGCACATTTG 60.179 55.000 22.69 7.51 46.47 2.32 R
3984 14183 1.005805 ACTGCAGGGATGGCAATGTAA 59.994 47.619 19.93 0.00 41.39 2.41 R
5291 16084 1.691434 GCAATTTCCACCACCTTCCAA 59.309 47.619 0.00 0.00 0.00 3.53 R
5403 16196 0.107410 TTTGTGTCCTCAACGGTGCT 60.107 50.000 0.00 0.00 0.00 4.40 R
6319 17432 0.039527 GGTGCAGGCGTACTTTTTGG 60.040 55.000 0.00 0.00 0.00 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 683 1.207593 GCAGCTGCGTTCAATCGTT 59.792 52.632 25.23 0.00 0.00 3.85
101 766 8.193438 AGTTTGCTAGAATATTTTGGATTGCTC 58.807 33.333 0.00 0.00 0.00 4.26
132 797 1.342076 TGGGTGGGCTCTGTAGACTAG 60.342 57.143 0.00 0.00 0.00 2.57
136 801 0.664224 GGGCTCTGTAGACTAGTCGC 59.336 60.000 17.07 12.64 34.09 5.19
149 814 7.601130 TGTAGACTAGTCGCAACAAATTTATGT 59.399 33.333 17.07 0.00 32.51 2.29
171 836 7.852971 TGTTTGAGTATTTATTTCCTACCCG 57.147 36.000 0.00 0.00 0.00 5.28
172 837 6.824704 TGTTTGAGTATTTATTTCCTACCCGG 59.175 38.462 0.00 0.00 0.00 5.73
182 847 3.390521 CTACCCGGCCTGCTGACA 61.391 66.667 0.00 0.00 0.00 3.58
187 852 1.213537 CCGGCCTGCTGACATTTTG 59.786 57.895 0.00 0.00 0.00 2.44
228 893 2.267324 GCAGTGGAGCCCTCTCAC 59.733 66.667 0.00 8.11 41.13 3.51
257 922 4.878971 CCGGTAATGTGGATGTTGTTATCA 59.121 41.667 0.00 0.00 0.00 2.15
304 969 1.039785 CATCGCCCTGTCTCCTCAGA 61.040 60.000 0.00 0.00 37.61 3.27
308 973 0.398381 GCCCTGTCTCCTCAGAGGAT 60.398 60.000 20.22 0.00 44.81 3.24
354 1019 3.594603 TTTTGTTTCTTTTGCCGGACA 57.405 38.095 5.05 0.00 0.00 4.02
357 1022 2.302260 TGTTTCTTTTGCCGGACATGA 58.698 42.857 5.05 0.00 0.00 3.07
379 1044 3.652869 AGGGTTCTTTGACTTGATCCTGA 59.347 43.478 0.00 0.00 0.00 3.86
386 1051 7.678947 TCTTTGACTTGATCCTGATCTTTTC 57.321 36.000 8.50 3.09 38.60 2.29
403 1068 7.944554 TGATCTTTTCTGAATCCTAAACCTTGT 59.055 33.333 0.00 0.00 0.00 3.16
408 1073 4.039973 TCTGAATCCTAAACCTTGTCGTGT 59.960 41.667 0.00 0.00 0.00 4.49
411 1076 3.823281 TCCTAAACCTTGTCGTGTTGA 57.177 42.857 0.00 0.00 0.00 3.18
415 1080 6.289834 TCCTAAACCTTGTCGTGTTGATTTA 58.710 36.000 0.00 0.00 0.00 1.40
416 1081 6.938030 TCCTAAACCTTGTCGTGTTGATTTAT 59.062 34.615 0.00 0.00 0.00 1.40
448 1113 4.141251 AGTTGGGAAACTGCCTTTCTCTAA 60.141 41.667 5.65 0.00 39.80 2.10
471 1137 1.463674 AAATCGACTCCCATGGCAAC 58.536 50.000 6.09 0.00 0.00 4.17
493 1159 3.943381 CACACGGACACATACCTAGTAGA 59.057 47.826 0.00 0.00 0.00 2.59
542 1209 0.601558 GGCTGTAGTCGACCAGTTCA 59.398 55.000 18.98 8.84 0.00 3.18
669 1336 3.534357 AACCCATGTCAACCCACATTA 57.466 42.857 0.00 0.00 34.60 1.90
703 1370 2.122167 AGATCGAGTCGTGGCCTCC 61.122 63.158 13.12 0.00 0.00 4.30
751 1419 4.584688 GTCCCCGGACGTTAACTG 57.415 61.111 0.73 0.09 35.30 3.16
781 1467 2.380084 TTAGTAAGCAAGGCGGTCTG 57.620 50.000 0.00 0.00 0.00 3.51
807 1493 3.558418 GTGTGTGTGACGACTTGGTTAAT 59.442 43.478 0.00 0.00 0.00 1.40
1029 6433 2.670934 CCGTGGCTGCTGCTTCTT 60.671 61.111 15.64 0.00 39.59 2.52
1123 6549 5.535333 CATTCTCAAAGTTTCATGTTGCCT 58.465 37.500 0.00 0.00 0.00 4.75
1128 6554 5.728471 TCAAAGTTTCATGTTGCCTCAAAA 58.272 33.333 0.00 0.00 0.00 2.44
1144 6570 5.689068 GCCTCAAAACTCAAAAGATCACAAG 59.311 40.000 0.00 0.00 0.00 3.16
1172 6598 5.693961 TGGATAATTCATACACCACAGCAT 58.306 37.500 0.00 0.00 0.00 3.79
1181 6607 5.528320 TCATACACCACAGCATATCATTGTG 59.472 40.000 4.52 4.52 41.34 3.33
1197 6623 0.327924 TGTGCCATCGGGTCATCTTT 59.672 50.000 0.00 0.00 36.17 2.52
1293 6748 2.125961 GGAGACGGGCTACACGGAT 61.126 63.158 0.00 0.00 35.23 4.18
1794 7274 2.968697 GGCGACGAAAACACCGGT 60.969 61.111 0.00 0.00 0.00 5.28
1806 7286 4.130255 ACCGGTATCAGGTGTGCT 57.870 55.556 4.49 0.00 41.10 4.40
1859 8039 7.934120 AGTATATCAAAGATCACAAGCTTACCC 59.066 37.037 0.00 0.00 29.07 3.69
2060 11376 2.108514 CGTGATGCAGACGGCCATT 61.109 57.895 12.15 0.00 43.89 3.16
2159 11475 3.808174 ACATCATCATCATGCACTTCTCG 59.192 43.478 0.00 0.00 0.00 4.04
2325 11641 2.525629 TCTCCCTCAACGCCACCA 60.526 61.111 0.00 0.00 0.00 4.17
2393 11717 0.988832 TCATACCCACCACCAACCTC 59.011 55.000 0.00 0.00 0.00 3.85
2420 11744 0.902531 ACTCCCAGGACGGTATGTTG 59.097 55.000 0.00 0.00 0.00 3.33
2422 11746 0.611200 TCCCAGGACGGTATGTTGTG 59.389 55.000 0.00 0.00 0.00 3.33
2424 11748 1.438651 CCAGGACGGTATGTTGTGTG 58.561 55.000 0.00 0.00 0.00 3.82
2429 11753 2.610976 GGACGGTATGTTGTGTGCTGTA 60.611 50.000 0.00 0.00 0.00 2.74
2430 11754 2.409975 ACGGTATGTTGTGTGCTGTAC 58.590 47.619 0.00 0.00 0.00 2.90
2431 11755 2.224090 ACGGTATGTTGTGTGCTGTACA 60.224 45.455 0.00 0.00 36.82 2.90
2453 11777 4.391140 CAAAGTTCCTTTGTAGCTCGTC 57.609 45.455 8.25 0.00 43.85 4.20
2454 11778 2.745515 AGTTCCTTTGTAGCTCGTCC 57.254 50.000 0.00 0.00 0.00 4.79
2455 11779 2.249139 AGTTCCTTTGTAGCTCGTCCT 58.751 47.619 0.00 0.00 0.00 3.85
2456 11780 3.428532 AGTTCCTTTGTAGCTCGTCCTA 58.571 45.455 0.00 0.00 0.00 2.94
2457 11781 3.193056 AGTTCCTTTGTAGCTCGTCCTAC 59.807 47.826 0.00 7.86 38.50 3.18
2459 11783 3.362706 TCCTTTGTAGCTCGTCCTACAT 58.637 45.455 15.12 0.00 45.00 2.29
2461 11785 3.448686 CTTTGTAGCTCGTCCTACATGG 58.551 50.000 15.12 9.48 45.00 3.66
2475 11799 6.732896 TCCTACATGGAACCTCTTATCTTC 57.267 41.667 0.00 0.00 42.94 2.87
2477 11801 6.325028 TCCTACATGGAACCTCTTATCTTCAG 59.675 42.308 0.00 0.00 42.94 3.02
2478 11802 4.775236 ACATGGAACCTCTTATCTTCAGC 58.225 43.478 0.00 0.00 0.00 4.26
2479 11803 3.914426 TGGAACCTCTTATCTTCAGCC 57.086 47.619 0.00 0.00 0.00 4.85
2480 11804 2.505819 TGGAACCTCTTATCTTCAGCCC 59.494 50.000 0.00 0.00 0.00 5.19
2481 11805 2.774809 GGAACCTCTTATCTTCAGCCCT 59.225 50.000 0.00 0.00 0.00 5.19
2482 11806 3.201045 GGAACCTCTTATCTTCAGCCCTT 59.799 47.826 0.00 0.00 0.00 3.95
2483 11807 4.447290 GAACCTCTTATCTTCAGCCCTTC 58.553 47.826 0.00 0.00 0.00 3.46
2484 11808 3.454858 ACCTCTTATCTTCAGCCCTTCA 58.545 45.455 0.00 0.00 0.00 3.02
2487 11811 4.323792 CCTCTTATCTTCAGCCCTTCAACA 60.324 45.833 0.00 0.00 0.00 3.33
2488 11812 5.435291 CTCTTATCTTCAGCCCTTCAACAT 58.565 41.667 0.00 0.00 0.00 2.71
2489 11813 5.819991 TCTTATCTTCAGCCCTTCAACATT 58.180 37.500 0.00 0.00 0.00 2.71
2490 11814 5.649395 TCTTATCTTCAGCCCTTCAACATTG 59.351 40.000 0.00 0.00 0.00 2.82
2491 11815 1.888512 TCTTCAGCCCTTCAACATTGC 59.111 47.619 0.00 0.00 0.00 3.56
2492 11816 1.891150 CTTCAGCCCTTCAACATTGCT 59.109 47.619 0.00 0.00 0.00 3.91
2493 11817 1.999648 TCAGCCCTTCAACATTGCTT 58.000 45.000 0.00 0.00 0.00 3.91
2494 11818 2.318908 TCAGCCCTTCAACATTGCTTT 58.681 42.857 0.00 0.00 0.00 3.51
2495 11819 2.036217 TCAGCCCTTCAACATTGCTTTG 59.964 45.455 0.00 0.00 0.00 2.77
2496 11820 2.036217 CAGCCCTTCAACATTGCTTTGA 59.964 45.455 0.00 0.00 0.00 2.69
2497 11821 2.298163 AGCCCTTCAACATTGCTTTGAG 59.702 45.455 0.00 0.00 34.50 3.02
2498 11822 2.297033 GCCCTTCAACATTGCTTTGAGA 59.703 45.455 0.00 0.00 34.50 3.27
2499 11823 3.056322 GCCCTTCAACATTGCTTTGAGAT 60.056 43.478 0.00 0.00 34.50 2.75
2500 11824 4.741342 CCCTTCAACATTGCTTTGAGATC 58.259 43.478 0.00 0.00 34.50 2.75
2501 11825 4.381292 CCCTTCAACATTGCTTTGAGATCC 60.381 45.833 0.00 0.00 34.50 3.36
2502 11826 4.409570 CTTCAACATTGCTTTGAGATCCG 58.590 43.478 0.00 0.00 34.50 4.18
2503 11827 3.411446 TCAACATTGCTTTGAGATCCGT 58.589 40.909 0.00 0.00 0.00 4.69
2504 11828 4.574892 TCAACATTGCTTTGAGATCCGTA 58.425 39.130 0.00 0.00 0.00 4.02
2505 11829 4.391830 TCAACATTGCTTTGAGATCCGTAC 59.608 41.667 0.00 0.00 0.00 3.67
2506 11830 4.207891 ACATTGCTTTGAGATCCGTACT 57.792 40.909 0.00 0.00 0.00 2.73
2507 11831 4.579869 ACATTGCTTTGAGATCCGTACTT 58.420 39.130 0.00 0.00 0.00 2.24
2508 11832 5.003804 ACATTGCTTTGAGATCCGTACTTT 58.996 37.500 0.00 0.00 0.00 2.66
2509 11833 5.473504 ACATTGCTTTGAGATCCGTACTTTT 59.526 36.000 0.00 0.00 0.00 2.27
2510 11834 5.607119 TTGCTTTGAGATCCGTACTTTTC 57.393 39.130 0.00 0.00 0.00 2.29
2511 11835 4.637276 TGCTTTGAGATCCGTACTTTTCA 58.363 39.130 0.00 0.00 0.00 2.69
2512 11836 5.060506 TGCTTTGAGATCCGTACTTTTCAA 58.939 37.500 0.00 0.00 0.00 2.69
2513 11837 5.049680 TGCTTTGAGATCCGTACTTTTCAAC 60.050 40.000 0.00 0.00 0.00 3.18
2514 11838 5.179555 GCTTTGAGATCCGTACTTTTCAACT 59.820 40.000 0.00 0.00 0.00 3.16
2515 11839 6.367969 GCTTTGAGATCCGTACTTTTCAACTA 59.632 38.462 0.00 0.00 0.00 2.24
2516 11840 7.095355 GCTTTGAGATCCGTACTTTTCAACTAA 60.095 37.037 0.00 0.00 0.00 2.24
2517 11841 7.647907 TTGAGATCCGTACTTTTCAACTAAC 57.352 36.000 0.00 0.00 0.00 2.34
2518 11842 6.989659 TGAGATCCGTACTTTTCAACTAACT 58.010 36.000 0.00 0.00 0.00 2.24
2519 11843 7.439381 TGAGATCCGTACTTTTCAACTAACTT 58.561 34.615 0.00 0.00 0.00 2.66
2520 11844 7.384115 TGAGATCCGTACTTTTCAACTAACTTG 59.616 37.037 0.00 0.00 0.00 3.16
2521 11845 5.662211 TCCGTACTTTTCAACTAACTTGC 57.338 39.130 0.00 0.00 0.00 4.01
2522 11846 5.117584 TCCGTACTTTTCAACTAACTTGCA 58.882 37.500 0.00 0.00 0.00 4.08
2523 11847 5.585445 TCCGTACTTTTCAACTAACTTGCAA 59.415 36.000 0.00 0.00 0.00 4.08
2524 11848 5.679792 CCGTACTTTTCAACTAACTTGCAAC 59.320 40.000 0.00 0.00 0.00 4.17
2525 11849 6.252281 CGTACTTTTCAACTAACTTGCAACA 58.748 36.000 0.00 0.00 0.00 3.33
2526 11850 6.743627 CGTACTTTTCAACTAACTTGCAACAA 59.256 34.615 0.00 0.00 0.00 2.83
2527 11851 7.044966 CGTACTTTTCAACTAACTTGCAACAAG 60.045 37.037 5.80 5.80 0.00 3.16
2528 11852 5.576774 ACTTTTCAACTAACTTGCAACAAGC 59.423 36.000 7.23 0.00 45.96 4.01
2565 11889 9.703892 TTTTTGTTTCTCTCAAATGAAAGAACA 57.296 25.926 0.00 0.00 35.94 3.18
2566 11890 9.874205 TTTTGTTTCTCTCAAATGAAAGAACAT 57.126 25.926 0.00 0.00 35.94 2.71
2570 11894 9.565213 GTTTCTCTCAAATGAAAGAACATATGG 57.435 33.333 7.80 0.00 33.54 2.74
2571 11895 9.519191 TTTCTCTCAAATGAAAGAACATATGGA 57.481 29.630 7.80 0.00 0.00 3.41
2572 11896 8.498054 TCTCTCAAATGAAAGAACATATGGAC 57.502 34.615 7.80 0.51 0.00 4.02
2573 11897 8.324306 TCTCTCAAATGAAAGAACATATGGACT 58.676 33.333 7.80 2.97 0.00 3.85
2574 11898 8.868522 TCTCAAATGAAAGAACATATGGACTT 57.131 30.769 7.80 8.96 0.00 3.01
2575 11899 8.950210 TCTCAAATGAAAGAACATATGGACTTC 58.050 33.333 7.80 2.14 0.00 3.01
2576 11900 8.634335 TCAAATGAAAGAACATATGGACTTCA 57.366 30.769 7.80 10.24 0.00 3.02
2577 11901 9.076781 TCAAATGAAAGAACATATGGACTTCAA 57.923 29.630 7.80 4.88 0.00 2.69
2578 11902 9.695526 CAAATGAAAGAACATATGGACTTCAAA 57.304 29.630 7.80 2.78 0.00 2.69
2579 11903 9.696917 AAATGAAAGAACATATGGACTTCAAAC 57.303 29.630 7.80 5.93 0.00 2.93
2580 11904 8.641498 ATGAAAGAACATATGGACTTCAAACT 57.359 30.769 7.80 0.00 0.00 2.66
2581 11905 8.463930 TGAAAGAACATATGGACTTCAAACTT 57.536 30.769 7.80 0.00 0.00 2.66
2582 11906 8.912988 TGAAAGAACATATGGACTTCAAACTTT 58.087 29.630 7.80 0.00 0.00 2.66
2583 11907 9.399403 GAAAGAACATATGGACTTCAAACTTTC 57.601 33.333 7.80 0.00 34.24 2.62
2584 11908 7.454260 AGAACATATGGACTTCAAACTTTCC 57.546 36.000 7.80 0.00 0.00 3.13
2585 11909 7.004086 AGAACATATGGACTTCAAACTTTCCA 58.996 34.615 7.80 0.00 42.34 3.53
2586 11910 6.824305 ACATATGGACTTCAAACTTTCCAG 57.176 37.500 7.80 0.00 41.45 3.86
2587 11911 6.542821 ACATATGGACTTCAAACTTTCCAGA 58.457 36.000 7.80 0.00 41.45 3.86
2588 11912 7.177878 ACATATGGACTTCAAACTTTCCAGAT 58.822 34.615 7.80 0.00 41.45 2.90
2589 11913 7.337942 ACATATGGACTTCAAACTTTCCAGATC 59.662 37.037 7.80 0.00 41.45 2.75
2590 11914 5.047566 TGGACTTCAAACTTTCCAGATCA 57.952 39.130 0.00 0.00 33.02 2.92
2591 11915 5.445069 TGGACTTCAAACTTTCCAGATCAA 58.555 37.500 0.00 0.00 33.02 2.57
2592 11916 5.890985 TGGACTTCAAACTTTCCAGATCAAA 59.109 36.000 0.00 0.00 33.02 2.69
2593 11917 6.183360 TGGACTTCAAACTTTCCAGATCAAAC 60.183 38.462 0.00 0.00 33.02 2.93
2594 11918 6.183360 GGACTTCAAACTTTCCAGATCAAACA 60.183 38.462 0.00 0.00 0.00 2.83
2595 11919 7.169158 ACTTCAAACTTTCCAGATCAAACAA 57.831 32.000 0.00 0.00 0.00 2.83
2596 11920 7.610865 ACTTCAAACTTTCCAGATCAAACAAA 58.389 30.769 0.00 0.00 0.00 2.83
2597 11921 7.545615 ACTTCAAACTTTCCAGATCAAACAAAC 59.454 33.333 0.00 0.00 0.00 2.93
2598 11922 7.169158 TCAAACTTTCCAGATCAAACAAACT 57.831 32.000 0.00 0.00 0.00 2.66
2599 11923 7.610865 TCAAACTTTCCAGATCAAACAAACTT 58.389 30.769 0.00 0.00 0.00 2.66
2600 11924 8.093927 TCAAACTTTCCAGATCAAACAAACTTT 58.906 29.630 0.00 0.00 0.00 2.66
2601 11925 9.364989 CAAACTTTCCAGATCAAACAAACTTTA 57.635 29.630 0.00 0.00 0.00 1.85
2602 11926 8.926715 AACTTTCCAGATCAAACAAACTTTAC 57.073 30.769 0.00 0.00 0.00 2.01
2603 11927 8.062065 ACTTTCCAGATCAAACAAACTTTACA 57.938 30.769 0.00 0.00 0.00 2.41
2604 11928 8.527810 ACTTTCCAGATCAAACAAACTTTACAA 58.472 29.630 0.00 0.00 0.00 2.41
2605 11929 8.696410 TTTCCAGATCAAACAAACTTTACAAC 57.304 30.769 0.00 0.00 0.00 3.32
2606 11930 7.639113 TCCAGATCAAACAAACTTTACAACT 57.361 32.000 0.00 0.00 0.00 3.16
2607 11931 8.062065 TCCAGATCAAACAAACTTTACAACTT 57.938 30.769 0.00 0.00 0.00 2.66
2608 11932 8.188139 TCCAGATCAAACAAACTTTACAACTTC 58.812 33.333 0.00 0.00 0.00 3.01
2609 11933 7.973388 CCAGATCAAACAAACTTTACAACTTCA 59.027 33.333 0.00 0.00 0.00 3.02
2610 11934 9.352784 CAGATCAAACAAACTTTACAACTTCAA 57.647 29.630 0.00 0.00 0.00 2.69
2613 11937 9.651913 ATCAAACAAACTTTACAACTTCAATGT 57.348 25.926 0.00 0.00 34.81 2.71
2614 11938 8.920665 TCAAACAAACTTTACAACTTCAATGTG 58.079 29.630 0.00 0.00 32.27 3.21
2615 11939 8.707839 CAAACAAACTTTACAACTTCAATGTGT 58.292 29.630 0.00 0.00 32.27 3.72
2616 11940 7.810766 ACAAACTTTACAACTTCAATGTGTG 57.189 32.000 0.00 0.00 32.27 3.82
2617 11941 7.598278 ACAAACTTTACAACTTCAATGTGTGA 58.402 30.769 0.00 0.00 32.27 3.58
2618 11942 8.085296 ACAAACTTTACAACTTCAATGTGTGAA 58.915 29.630 0.00 0.00 44.20 3.18
2619 11943 8.920665 CAAACTTTACAACTTCAATGTGTGAAA 58.079 29.630 0.00 0.00 45.67 2.69
2620 11944 9.482627 AAACTTTACAACTTCAATGTGTGAAAA 57.517 25.926 0.00 0.00 45.67 2.29
2621 11945 9.482627 AACTTTACAACTTCAATGTGTGAAAAA 57.517 25.926 0.00 0.00 45.67 1.94
2748 12072 8.851541 TTTTTCCCACGTAGTAATTAGAATGT 57.148 30.769 0.00 0.00 41.61 2.71
2749 12073 8.851541 TTTTCCCACGTAGTAATTAGAATGTT 57.148 30.769 0.00 0.00 41.61 2.71
2750 12074 8.851541 TTTCCCACGTAGTAATTAGAATGTTT 57.148 30.769 0.00 0.00 41.61 2.83
2751 12075 8.851541 TTCCCACGTAGTAATTAGAATGTTTT 57.148 30.769 0.00 0.00 41.61 2.43
2752 12076 8.259049 TCCCACGTAGTAATTAGAATGTTTTG 57.741 34.615 0.00 0.00 41.61 2.44
2753 12077 7.879160 TCCCACGTAGTAATTAGAATGTTTTGT 59.121 33.333 0.00 0.00 41.61 2.83
2754 12078 8.508875 CCCACGTAGTAATTAGAATGTTTTGTT 58.491 33.333 0.00 0.00 41.61 2.83
2755 12079 9.325150 CCACGTAGTAATTAGAATGTTTTGTTG 57.675 33.333 0.00 0.00 41.61 3.33
2756 12080 9.872757 CACGTAGTAATTAGAATGTTTTGTTGT 57.127 29.630 0.00 0.00 41.61 3.32
2758 12082 9.537848 CGTAGTAATTAGAATGTTTTGTTGTCC 57.462 33.333 0.00 0.00 0.00 4.02
2761 12085 8.082242 AGTAATTAGAATGTTTTGTTGTCCTGC 58.918 33.333 0.00 0.00 0.00 4.85
2762 12086 5.843673 TTAGAATGTTTTGTTGTCCTGCA 57.156 34.783 0.00 0.00 0.00 4.41
2763 12087 4.734398 AGAATGTTTTGTTGTCCTGCAA 57.266 36.364 0.00 0.00 34.16 4.08
2764 12088 5.083533 AGAATGTTTTGTTGTCCTGCAAA 57.916 34.783 0.00 0.00 39.03 3.68
2765 12089 5.111293 AGAATGTTTTGTTGTCCTGCAAAG 58.889 37.500 0.00 0.00 39.03 2.77
2766 12090 3.951775 TGTTTTGTTGTCCTGCAAAGT 57.048 38.095 0.00 0.00 39.03 2.66
2767 12091 3.583806 TGTTTTGTTGTCCTGCAAAGTG 58.416 40.909 0.00 0.00 39.03 3.16
2768 12092 3.006323 TGTTTTGTTGTCCTGCAAAGTGT 59.994 39.130 0.00 0.00 39.03 3.55
2769 12093 2.937469 TTGTTGTCCTGCAAAGTGTG 57.063 45.000 0.00 0.00 39.03 3.82
2770 12094 2.121291 TGTTGTCCTGCAAAGTGTGA 57.879 45.000 0.00 0.00 39.03 3.58
2771 12095 2.441410 TGTTGTCCTGCAAAGTGTGAA 58.559 42.857 0.00 0.00 39.03 3.18
2772 12096 2.423185 TGTTGTCCTGCAAAGTGTGAAG 59.577 45.455 0.00 0.00 39.03 3.02
2773 12097 2.418368 TGTCCTGCAAAGTGTGAAGT 57.582 45.000 0.00 0.00 29.41 3.01
2774 12098 2.722094 TGTCCTGCAAAGTGTGAAGTT 58.278 42.857 0.00 0.00 29.41 2.66
2775 12099 3.088532 TGTCCTGCAAAGTGTGAAGTTT 58.911 40.909 0.00 0.00 29.41 2.66
2776 12100 4.265893 TGTCCTGCAAAGTGTGAAGTTTA 58.734 39.130 0.00 0.00 29.41 2.01
2777 12101 4.887071 TGTCCTGCAAAGTGTGAAGTTTAT 59.113 37.500 0.00 0.00 29.41 1.40
2778 12102 6.058833 TGTCCTGCAAAGTGTGAAGTTTATA 58.941 36.000 0.00 0.00 29.41 0.98
2779 12103 6.017440 TGTCCTGCAAAGTGTGAAGTTTATAC 60.017 38.462 0.00 0.00 29.41 1.47
2780 12104 5.178623 TCCTGCAAAGTGTGAAGTTTATACG 59.821 40.000 0.00 0.00 29.41 3.06
2781 12105 5.049680 CCTGCAAAGTGTGAAGTTTATACGT 60.050 40.000 0.00 0.00 29.41 3.57
2782 12106 6.366315 TGCAAAGTGTGAAGTTTATACGTT 57.634 33.333 0.00 0.00 0.00 3.99
2783 12107 6.195868 TGCAAAGTGTGAAGTTTATACGTTG 58.804 36.000 15.03 15.03 35.07 4.10
2784 12108 6.183360 TGCAAAGTGTGAAGTTTATACGTTGT 60.183 34.615 18.41 0.00 34.66 3.32
2785 12109 6.689669 GCAAAGTGTGAAGTTTATACGTTGTT 59.310 34.615 18.41 0.15 34.66 2.83
2786 12110 7.219344 GCAAAGTGTGAAGTTTATACGTTGTTT 59.781 33.333 18.41 1.31 34.66 2.83
2787 12111 8.730427 CAAAGTGTGAAGTTTATACGTTGTTTC 58.270 33.333 12.44 0.00 0.00 2.78
2788 12112 6.642917 AGTGTGAAGTTTATACGTTGTTTCG 58.357 36.000 0.00 0.00 0.00 3.46
2789 12113 6.256321 AGTGTGAAGTTTATACGTTGTTTCGT 59.744 34.615 0.00 0.00 45.97 3.85
2790 12114 6.901357 GTGTGAAGTTTATACGTTGTTTCGTT 59.099 34.615 0.00 0.00 43.80 3.85
2791 12115 7.426169 GTGTGAAGTTTATACGTTGTTTCGTTT 59.574 33.333 0.00 0.00 43.80 3.60
2792 12116 7.425882 TGTGAAGTTTATACGTTGTTTCGTTTG 59.574 33.333 0.00 0.00 43.80 2.93
2793 12117 7.635587 GTGAAGTTTATACGTTGTTTCGTTTGA 59.364 33.333 0.00 0.00 43.80 2.69
2794 12118 7.847078 TGAAGTTTATACGTTGTTTCGTTTGAG 59.153 33.333 0.00 0.00 43.80 3.02
2795 12119 7.467557 AGTTTATACGTTGTTTCGTTTGAGA 57.532 32.000 0.00 0.00 43.80 3.27
2796 12120 7.561556 AGTTTATACGTTGTTTCGTTTGAGAG 58.438 34.615 0.00 0.00 43.80 3.20
2797 12121 7.436080 AGTTTATACGTTGTTTCGTTTGAGAGA 59.564 33.333 0.00 0.00 43.80 3.10
2798 12122 7.697352 TTATACGTTGTTTCGTTTGAGAGAA 57.303 32.000 0.00 0.00 43.80 2.87
2799 12123 4.932268 ACGTTGTTTCGTTTGAGAGAAA 57.068 36.364 0.00 0.00 41.37 2.52
2809 12133 7.734538 TTCGTTTGAGAGAAACAAAAATGAC 57.265 32.000 0.00 0.00 38.63 3.06
2810 12134 6.847400 TCGTTTGAGAGAAACAAAAATGACA 58.153 32.000 0.00 0.00 38.63 3.58
2811 12135 7.309177 TCGTTTGAGAGAAACAAAAATGACAA 58.691 30.769 0.00 0.00 38.63 3.18
2812 12136 7.810282 TCGTTTGAGAGAAACAAAAATGACAAA 59.190 29.630 0.00 0.00 38.63 2.83
2813 12137 8.594687 CGTTTGAGAGAAACAAAAATGACAAAT 58.405 29.630 0.00 0.00 38.63 2.32
2814 12138 9.693157 GTTTGAGAGAAACAAAAATGACAAATG 57.307 29.630 0.00 0.00 38.63 2.32
2815 12139 9.434420 TTTGAGAGAAACAAAAATGACAAATGT 57.566 25.926 0.00 0.00 34.89 2.71
2816 12140 8.410030 TGAGAGAAACAAAAATGACAAATGTG 57.590 30.769 0.00 0.00 0.00 3.21
2817 12141 7.010367 TGAGAGAAACAAAAATGACAAATGTGC 59.990 33.333 0.00 0.00 0.00 4.57
2818 12142 6.258507 AGAGAAACAAAAATGACAAATGTGCC 59.741 34.615 0.00 0.00 0.00 5.01
2819 12143 6.114767 AGAAACAAAAATGACAAATGTGCCT 58.885 32.000 0.00 0.00 0.00 4.75
2820 12144 5.738118 AACAAAAATGACAAATGTGCCTG 57.262 34.783 0.00 0.00 0.00 4.85
2821 12145 3.560896 ACAAAAATGACAAATGTGCCTGC 59.439 39.130 0.00 0.00 0.00 4.85
2822 12146 3.472283 AAAATGACAAATGTGCCTGCA 57.528 38.095 0.00 0.00 0.00 4.41
2823 12147 2.443887 AATGACAAATGTGCCTGCAC 57.556 45.000 15.15 15.15 46.33 4.57
2831 12155 3.181367 GTGCCTGCACGGATCTTG 58.819 61.111 6.50 0.00 37.19 3.02
2832 12156 1.375908 GTGCCTGCACGGATCTTGA 60.376 57.895 6.50 0.00 37.19 3.02
2833 12157 0.745845 GTGCCTGCACGGATCTTGAT 60.746 55.000 6.50 0.00 37.19 2.57
2834 12158 0.745486 TGCCTGCACGGATCTTGATG 60.745 55.000 6.40 0.00 33.16 3.07
2835 12159 2.020131 CCTGCACGGATCTTGATGC 58.980 57.895 0.00 0.00 38.59 3.91
2836 12160 1.442526 CCTGCACGGATCTTGATGCC 61.443 60.000 0.00 0.00 37.26 4.40
2837 12161 0.745486 CTGCACGGATCTTGATGCCA 60.745 55.000 0.00 0.00 37.26 4.92
2838 12162 0.322366 TGCACGGATCTTGATGCCAA 60.322 50.000 0.00 0.00 37.26 4.52
2839 12163 0.810648 GCACGGATCTTGATGCCAAA 59.189 50.000 0.00 0.00 31.71 3.28
2840 12164 1.202114 GCACGGATCTTGATGCCAAAA 59.798 47.619 0.00 0.00 31.71 2.44
2841 12165 2.159198 GCACGGATCTTGATGCCAAAAT 60.159 45.455 0.00 0.00 31.71 1.82
2842 12166 3.441163 CACGGATCTTGATGCCAAAATG 58.559 45.455 0.00 0.00 0.00 2.32
2843 12167 2.428171 ACGGATCTTGATGCCAAAATGG 59.572 45.455 0.00 0.00 41.55 3.16
2844 12168 2.689471 CGGATCTTGATGCCAAAATGGA 59.311 45.455 0.00 0.00 40.96 3.41
2845 12169 3.319972 CGGATCTTGATGCCAAAATGGAT 59.680 43.478 0.00 0.00 40.96 3.41
2846 12170 4.628074 GGATCTTGATGCCAAAATGGATG 58.372 43.478 0.00 0.00 40.96 3.51
2847 12171 4.502604 GGATCTTGATGCCAAAATGGATGG 60.503 45.833 0.00 0.00 40.96 3.51
2858 12182 6.336842 CCAAAATGGATGGCTAAGATAAGG 57.663 41.667 0.00 0.00 40.96 2.69
2859 12183 5.244626 CCAAAATGGATGGCTAAGATAAGGG 59.755 44.000 0.00 0.00 40.96 3.95
2860 12184 4.664688 AATGGATGGCTAAGATAAGGGG 57.335 45.455 0.00 0.00 0.00 4.79
2861 12185 3.074857 TGGATGGCTAAGATAAGGGGT 57.925 47.619 0.00 0.00 0.00 4.95
2862 12186 4.222333 TGGATGGCTAAGATAAGGGGTA 57.778 45.455 0.00 0.00 0.00 3.69
2863 12187 3.908103 TGGATGGCTAAGATAAGGGGTAC 59.092 47.826 0.00 0.00 0.00 3.34
2875 12199 4.023137 GGGTACCGTGTAGCTCCA 57.977 61.111 5.65 0.00 40.86 3.86
2876 12200 1.814527 GGGTACCGTGTAGCTCCAG 59.185 63.158 5.65 0.00 40.86 3.86
2877 12201 1.141234 GGTACCGTGTAGCTCCAGC 59.859 63.158 0.00 0.00 42.49 4.85
2889 12213 1.604604 GCTCCAGCTACACAAAACCA 58.395 50.000 0.00 0.00 38.21 3.67
2890 12214 1.266989 GCTCCAGCTACACAAAACCAC 59.733 52.381 0.00 0.00 38.21 4.16
2891 12215 2.571212 CTCCAGCTACACAAAACCACA 58.429 47.619 0.00 0.00 0.00 4.17
2892 12216 2.290641 CTCCAGCTACACAAAACCACAC 59.709 50.000 0.00 0.00 0.00 3.82
2893 12217 2.092646 TCCAGCTACACAAAACCACACT 60.093 45.455 0.00 0.00 0.00 3.55
2894 12218 2.290641 CCAGCTACACAAAACCACACTC 59.709 50.000 0.00 0.00 0.00 3.51
2895 12219 3.206150 CAGCTACACAAAACCACACTCT 58.794 45.455 0.00 0.00 0.00 3.24
2961 12285 5.207768 CAAGCACACACTTTAGTAGCTTTG 58.792 41.667 0.00 0.00 38.90 2.77
2969 12325 8.182227 ACACACTTTAGTAGCTTTGAGTTTTTC 58.818 33.333 0.00 0.00 0.00 2.29
3004 12360 7.605691 AGTCACATTTCTAAACCTTGAGATCAG 59.394 37.037 0.00 0.00 0.00 2.90
3013 12369 3.005554 ACCTTGAGATCAGCATTCAACG 58.994 45.455 0.00 0.00 0.00 4.10
3029 12385 1.672881 CAACGAGCCCCATCTCAATTC 59.327 52.381 0.00 0.00 33.41 2.17
3030 12386 1.207791 ACGAGCCCCATCTCAATTCT 58.792 50.000 0.00 0.00 33.41 2.40
3031 12387 1.139853 ACGAGCCCCATCTCAATTCTC 59.860 52.381 0.00 0.00 33.41 2.87
3032 12388 1.139654 CGAGCCCCATCTCAATTCTCA 59.860 52.381 0.00 0.00 33.41 3.27
3033 12389 2.420547 CGAGCCCCATCTCAATTCTCAA 60.421 50.000 0.00 0.00 33.41 3.02
3034 12390 3.212685 GAGCCCCATCTCAATTCTCAAG 58.787 50.000 0.00 0.00 33.41 3.02
3035 12391 2.579860 AGCCCCATCTCAATTCTCAAGT 59.420 45.455 0.00 0.00 0.00 3.16
3037 12393 3.766051 GCCCCATCTCAATTCTCAAGTTT 59.234 43.478 0.00 0.00 0.00 2.66
3068 12426 5.840940 ACAAGCTACTAACTAAAACTGCG 57.159 39.130 0.00 0.00 0.00 5.18
3085 12443 5.283060 ACTGCGCAAACATCTTACTAAAG 57.717 39.130 13.05 0.00 0.00 1.85
3094 12452 4.508662 ACATCTTACTAAAGCTGAGTGCC 58.491 43.478 11.01 0.00 44.23 5.01
3290 12693 3.078836 CCATTGCAAGGCCCCCAG 61.079 66.667 5.36 0.00 0.00 4.45
3311 12714 5.363868 CCAGGGATCATAAGAGTGTGAGTAA 59.636 44.000 0.00 0.00 0.00 2.24
3345 12818 5.795441 GCACGGATCTTATTCAGTGAAAAAC 59.205 40.000 10.14 0.00 42.24 2.43
3373 12846 0.890683 GTCAAATGGCCAAGAGGGTG 59.109 55.000 10.96 1.66 39.65 4.61
3379 12855 0.038166 TGGCCAAGAGGGTGACATTC 59.962 55.000 0.61 0.00 39.65 2.67
3508 12994 5.943416 CCCTCCAATACTTGTATGTGTTGAA 59.057 40.000 8.33 0.00 40.09 2.69
3548 13496 5.837437 ACATCCGTTGAAGTTTTATGCAAA 58.163 33.333 0.00 0.00 0.00 3.68
3667 13624 4.887071 TGACAGTTTTGTAAGTCAGGCAAT 59.113 37.500 0.00 0.00 37.76 3.56
3725 13686 9.774413 TCGAGTCATGTGAATAGTTCTAGTATA 57.226 33.333 0.00 0.00 0.00 1.47
3760 13721 0.311790 ATTTGTCACGCAACCAGCTG 59.688 50.000 6.78 6.78 42.61 4.24
3939 14129 0.604578 CAGACCTTTGCACCAATGGG 59.395 55.000 3.55 0.00 41.22 4.00
3984 14183 6.890979 AAAGAGAAGAGCAAGTTAGCAATT 57.109 33.333 0.00 0.00 36.85 2.32
4020 14225 3.865446 TGCAGTTCTGATAGTGGTCATG 58.135 45.455 3.84 0.00 0.00 3.07
4023 14228 4.186926 CAGTTCTGATAGTGGTCATGGTG 58.813 47.826 0.00 0.00 0.00 4.17
4028 14233 0.255890 ATAGTGGTCATGGTGGTGGC 59.744 55.000 0.00 0.00 0.00 5.01
4097 14317 1.959042 AGAGCACAACAACTGTCTGG 58.041 50.000 0.00 0.00 35.47 3.86
4100 14320 2.032981 CACAACAACTGTCTGGCCC 58.967 57.895 0.00 0.00 35.47 5.80
4113 14333 2.039879 GTCTGGCCCTTTTCCTAGTCAA 59.960 50.000 0.00 0.00 0.00 3.18
4293 14520 5.582269 CGAGGAGCTCAAGATGATAACAAAA 59.418 40.000 17.19 0.00 0.00 2.44
4392 14619 1.596727 GTGAAGCTGCGATCTCATTCC 59.403 52.381 9.33 0.00 0.00 3.01
4461 14693 6.015603 TGTTTGACTGCAATTCATGGTTCATA 60.016 34.615 0.00 0.00 33.25 2.15
4465 14697 6.883756 TGACTGCAATTCATGGTTCATAACTA 59.116 34.615 0.00 0.00 0.00 2.24
4472 14704 9.292846 CAATTCATGGTTCATAACTACATTGTG 57.707 33.333 0.00 0.00 0.00 3.33
4750 15513 8.135529 GTCAAACTATTTGTAGGAAGCAAACTT 58.864 33.333 1.50 0.00 41.36 2.66
4751 15514 8.349983 TCAAACTATTTGTAGGAAGCAAACTTC 58.650 33.333 1.50 0.00 44.52 3.01
4973 15763 3.763360 CCACCAACATCCTCTTAAATGCA 59.237 43.478 0.00 0.00 0.00 3.96
5042 15835 2.080693 GGCGACAATAACCATGTGTCA 58.919 47.619 12.32 0.00 41.42 3.58
5214 16007 0.467474 CAGCATCATCCAGTGGGCAT 60.467 55.000 9.92 0.00 32.99 4.40
5291 16084 5.182950 TGGAATTTATGATGTCAACAGCGTT 59.817 36.000 0.00 0.00 34.49 4.84
5312 16105 0.608130 GGAAGGTGGTGGAAATTGCC 59.392 55.000 0.00 0.00 0.00 4.52
5403 16196 1.687146 ATCGAGCTTGAGGAGGGCA 60.687 57.895 10.06 0.00 0.00 5.36
5475 16271 4.935808 ACAACCCGAACTTGAGTTATGATC 59.064 41.667 0.00 0.00 38.56 2.92
5528 16324 5.523188 GGACAAGAACAACATTGCATTTCAA 59.477 36.000 0.00 0.00 39.32 2.69
5548 16344 7.747155 TTCAACCGGAACATAATGTTAAGAA 57.253 32.000 9.46 0.00 41.28 2.52
5603 16399 5.354234 ACGTTGATGATTCCTATGTTTGGTC 59.646 40.000 0.00 0.00 0.00 4.02
5605 16401 5.351948 TGATGATTCCTATGTTTGGTCGA 57.648 39.130 0.00 0.00 0.00 4.20
5621 16418 7.606839 TGTTTGGTCGACAATATGGTACAAATA 59.393 33.333 18.91 10.10 40.06 1.40
5669 16466 4.983538 TGCTTGAGTGCAAATGTAAACATG 59.016 37.500 0.00 0.00 40.29 3.21
5672 16469 5.764487 TGAGTGCAAATGTAAACATGTCA 57.236 34.783 0.00 0.00 36.56 3.58
5679 16476 8.812329 GTGCAAATGTAAACATGTCAAGTTTAA 58.188 29.630 13.44 6.53 41.51 1.52
5689 16486 9.730420 AAACATGTCAAGTTTAAATGTAGTGTC 57.270 29.630 4.41 0.00 37.42 3.67
5756 16553 9.541143 TTGAAAGTAAGACATGCATCGATATTA 57.459 29.630 0.00 0.00 0.00 0.98
5791 16588 2.291346 GCCACCCCTATTGGTTGTTAGT 60.291 50.000 0.00 0.00 36.12 2.24
5796 16593 6.320418 CCACCCCTATTGGTTGTTAGTAATTC 59.680 42.308 0.00 0.00 36.12 2.17
5798 16595 7.067008 CACCCCTATTGGTTGTTAGTAATTCAG 59.933 40.741 0.00 0.00 36.12 3.02
5881 16678 1.024271 CGGTATGATTGGCACCCTTG 58.976 55.000 0.00 0.00 0.00 3.61
5897 16694 3.647590 ACCCTTGTGCTTGGAAATTCAAT 59.352 39.130 0.00 0.00 0.00 2.57
5917 16714 2.274542 TCCATACACACCCAAGGACAT 58.725 47.619 0.00 0.00 0.00 3.06
5934 16731 3.427098 GGACATCAACATGCATGTGTGAG 60.427 47.826 31.98 25.12 41.61 3.51
5944 16741 1.873903 GCATGTGTGAGGTGTTCGACT 60.874 52.381 0.00 0.00 0.00 4.18
5948 16745 0.529773 TGTGAGGTGTTCGACTGCAC 60.530 55.000 5.65 5.65 35.07 4.57
5953 16750 1.411246 AGGTGTTCGACTGCACAGTTA 59.589 47.619 4.52 0.00 42.66 2.24
5963 16760 4.499019 CGACTGCACAGTTACCCAAAAATT 60.499 41.667 4.52 0.00 42.66 1.82
5986 16783 0.183731 GGCCCCAAATCCTACTCCTG 59.816 60.000 0.00 0.00 0.00 3.86
6020 17132 7.558161 TGTGCAATAGATCTTGTAGGAATTG 57.442 36.000 0.00 4.14 0.00 2.32
6021 17133 6.038603 TGTGCAATAGATCTTGTAGGAATTGC 59.961 38.462 21.97 21.97 44.86 3.56
6028 17140 1.667724 CTTGTAGGAATTGCAGAGCCG 59.332 52.381 0.00 0.00 0.00 5.52
6167 17280 8.817100 GGCACTTTTATTAACTTGAAATATGGC 58.183 33.333 0.00 0.00 0.00 4.40
6209 17322 1.951209 TGATTGACACCTGGCCTCTA 58.049 50.000 3.32 0.00 0.00 2.43
6214 17327 0.037232 GACACCTGGCCTCTACACAC 60.037 60.000 3.32 0.00 0.00 3.82
6234 17347 2.899900 ACAGCCAACATAGACAGTCTGA 59.100 45.455 13.84 0.00 0.00 3.27
6237 17350 2.996621 GCCAACATAGACAGTCTGACAC 59.003 50.000 13.84 1.37 0.00 3.67
6244 17357 7.561021 ACATAGACAGTCTGACACAGTATAG 57.439 40.000 13.84 4.79 32.61 1.31
6267 17380 7.195374 AGAAAGGACATAGTGGCTACAATAA 57.805 36.000 2.02 0.00 30.18 1.40
6304 17417 6.114187 TGAAACTATGCCAATATCGAGGAT 57.886 37.500 0.00 0.00 0.00 3.24
6334 17447 2.556622 ACCAATCCAAAAAGTACGCCTG 59.443 45.455 0.00 0.00 0.00 4.85
6339 17452 0.951558 CAAAAAGTACGCCTGCACCT 59.048 50.000 0.00 0.00 0.00 4.00
6347 17460 1.734163 ACGCCTGCACCTATGTTTAC 58.266 50.000 0.00 0.00 0.00 2.01
6357 17470 3.437741 CACCTATGTTTACCACCGGTTTC 59.562 47.826 2.97 0.00 37.09 2.78
6361 17474 2.022934 TGTTTACCACCGGTTTCAACC 58.977 47.619 2.97 0.00 45.76 3.77
6374 17487 1.231221 TTCAACCGCATACACACCAC 58.769 50.000 0.00 0.00 0.00 4.16
6402 17515 4.501071 ACAACGGTTGATACTCCATACAC 58.499 43.478 26.39 0.00 0.00 2.90
6412 17711 9.197694 GTTGATACTCCATACACTAAAGCATAG 57.802 37.037 0.00 0.00 0.00 2.23
6417 17716 5.914033 TCCATACACTAAAGCATAGACCAC 58.086 41.667 3.81 0.00 0.00 4.16
6427 17726 1.836383 CATAGACCACGTACGAAGCC 58.164 55.000 24.41 4.82 0.00 4.35
6429 17728 1.246649 TAGACCACGTACGAAGCCAA 58.753 50.000 24.41 0.00 0.00 4.52
6476 17775 4.380843 TGGGAGAAGAAGTTTTGCCATA 57.619 40.909 0.00 0.00 33.84 2.74
6478 17777 5.144100 TGGGAGAAGAAGTTTTGCCATAAA 58.856 37.500 0.00 0.00 33.84 1.40
6510 17824 8.275040 ACCAAAACTATCATAGTAAGGCAGATT 58.725 33.333 0.00 0.00 38.26 2.40
6517 17831 9.512588 CTATCATAGTAAGGCAGATTTTTCCAT 57.487 33.333 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.235665 ACAACGATTGAACGCAGCTG 59.764 50.000 10.11 10.11 36.70 4.24
6 7 1.263217 AGTTCCACAACGATTGAACGC 59.737 47.619 0.00 0.00 41.43 4.84
7 8 2.409752 CGAGTTCCACAACGATTGAACG 60.410 50.000 0.00 0.00 41.43 3.95
18 683 7.576861 TCATACATATTAGTCGAGTTCCACA 57.423 36.000 0.00 0.00 0.00 4.17
72 737 8.469200 CAATCCAAAATATTCTAGCAAACTGGA 58.531 33.333 0.00 0.00 33.98 3.86
101 766 1.002868 CCCACCCAAGAGCACAGAG 60.003 63.158 0.00 0.00 0.00 3.35
132 797 6.747659 ACTCAAACATAAATTTGTTGCGAC 57.252 33.333 0.00 0.00 39.68 5.19
149 814 5.824097 GCCGGGTAGGAAATAAATACTCAAA 59.176 40.000 2.18 0.00 45.00 2.69
171 836 2.531522 AAACAAAATGTCAGCAGGCC 57.468 45.000 0.00 0.00 0.00 5.19
172 837 5.982465 TTTTAAACAAAATGTCAGCAGGC 57.018 34.783 0.00 0.00 0.00 4.85
182 847 7.530863 ACAAACGCAACCATTTTAAACAAAAT 58.469 26.923 0.00 0.00 32.97 1.82
187 852 6.095947 TGAACAAACGCAACCATTTTAAAC 57.904 33.333 0.00 0.00 0.00 2.01
228 893 2.158813 ACATCCACATTACCGGCCTTAG 60.159 50.000 0.00 0.00 0.00 2.18
257 922 0.251033 CGGATCATGGCCACCATCAT 60.251 55.000 21.87 5.89 43.15 2.45
304 969 0.688087 GTGTTCTCCTCGGGGATCCT 60.688 60.000 3.31 0.00 41.36 3.24
308 973 1.152204 TTGGTGTTCTCCTCGGGGA 60.152 57.895 2.68 2.68 39.70 4.81
345 1010 1.002624 GAACCCTCATGTCCGGCAA 60.003 57.895 0.00 0.00 0.00 4.52
354 1019 4.290722 AGGATCAAGTCAAAGAACCCTCAT 59.709 41.667 0.00 0.00 0.00 2.90
357 1022 3.652869 TCAGGATCAAGTCAAAGAACCCT 59.347 43.478 0.00 0.00 0.00 4.34
379 1044 7.119846 CGACAAGGTTTAGGATTCAGAAAAGAT 59.880 37.037 0.00 0.00 0.00 2.40
386 1051 4.315803 ACACGACAAGGTTTAGGATTCAG 58.684 43.478 0.00 0.00 0.00 3.02
415 1080 8.838649 AGGCAGTTTCCCAACTTTATATAAAT 57.161 30.769 8.34 0.00 40.66 1.40
416 1081 8.658840 AAGGCAGTTTCCCAACTTTATATAAA 57.341 30.769 7.66 7.66 40.66 1.40
419 1084 6.954102 AGAAAGGCAGTTTCCCAACTTTATAT 59.046 34.615 7.07 0.00 45.16 0.86
428 1093 4.447138 TTTAGAGAAAGGCAGTTTCCCA 57.553 40.909 7.07 0.00 45.16 4.37
463 1129 1.282570 GTGTCCGTGTGTTGCCATG 59.717 57.895 0.00 0.00 0.00 3.66
471 1137 3.943381 TCTACTAGGTATGTGTCCGTGTG 59.057 47.826 0.00 0.00 0.00 3.82
493 1159 7.158697 GCCTCTCTTCTTTACTTTTCTCTTCT 58.841 38.462 0.00 0.00 0.00 2.85
542 1209 2.510238 GAGAGCGCACGAAGCCAT 60.510 61.111 11.47 0.00 41.38 4.40
580 1247 2.434359 CTGCCTTCGAACCGGTCC 60.434 66.667 8.04 0.00 0.00 4.46
685 1352 2.122167 GGAGGCCACGACTCGATCT 61.122 63.158 5.01 0.00 38.87 2.75
751 1419 5.694910 GCCTTGCTTACTAAAACCCTTTTTC 59.305 40.000 0.00 0.00 36.32 2.29
781 1467 1.060553 CAAGTCGTCACACACACACAC 59.939 52.381 0.00 0.00 0.00 3.82
807 1493 2.159028 TGTCACATCAACACCGACTTGA 60.159 45.455 0.00 0.00 32.24 3.02
812 1498 1.601914 CGACTGTCACATCAACACCGA 60.602 52.381 8.73 0.00 0.00 4.69
813 1499 0.784178 CGACTGTCACATCAACACCG 59.216 55.000 8.73 0.00 0.00 4.94
896 6298 5.819901 GCAGCTTCAACTCAATACCTTCTAT 59.180 40.000 0.00 0.00 0.00 1.98
904 6306 2.877097 TGGGCAGCTTCAACTCAATA 57.123 45.000 0.00 0.00 0.00 1.90
915 6317 4.733165 ACATATGTTTGATATGGGCAGCT 58.267 39.130 1.41 0.00 36.56 4.24
980 6384 1.580132 GCTCGTGGCGTTAATTGCG 60.580 57.895 0.00 0.00 0.00 4.85
1116 6542 5.126869 TGATCTTTTGAGTTTTGAGGCAACA 59.873 36.000 0.00 0.00 41.41 3.33
1123 6549 5.126869 TGCCTTGTGATCTTTTGAGTTTTGA 59.873 36.000 0.00 0.00 0.00 2.69
1128 6554 4.021719 CCATTGCCTTGTGATCTTTTGAGT 60.022 41.667 0.00 0.00 0.00 3.41
1144 6570 5.301551 TGTGGTGTATGAATTATCCATTGCC 59.698 40.000 0.00 0.00 0.00 4.52
1181 6607 2.919228 AGTTAAAGATGACCCGATGGC 58.081 47.619 0.00 0.00 33.59 4.40
1197 6623 4.968812 TGAATCGATCACCACGTAGTTA 57.031 40.909 0.00 0.00 32.00 2.24
1293 6748 3.556213 CGATGGAGAGTTTGGTGGTGTTA 60.556 47.826 0.00 0.00 0.00 2.41
1572 7046 0.994247 ATGGGCTGGAGATGTTCACA 59.006 50.000 0.00 0.00 0.00 3.58
1743 7217 2.031163 GTCAACAGCACGAGCCCT 59.969 61.111 0.00 0.00 43.56 5.19
1794 7274 9.851686 AAATTATGATCTTTAGCACACCTGATA 57.148 29.630 0.00 0.00 0.00 2.15
1824 7997 8.093927 TGTGATCTTTGATATACTGTCACACAA 58.906 33.333 0.00 0.00 39.57 3.33
1836 8009 6.064717 GGGGTAAGCTTGTGATCTTTGATAT 58.935 40.000 9.86 0.00 0.00 1.63
1837 8010 5.191722 AGGGGTAAGCTTGTGATCTTTGATA 59.808 40.000 9.86 0.00 0.00 2.15
1889 11079 8.428186 TCGATATTTGTGGTTAGTAATGAACC 57.572 34.615 0.00 0.00 45.64 3.62
2057 11373 3.937062 GCGTTCCGCGGCCTAATG 61.937 66.667 23.51 16.48 44.55 1.90
2195 11511 4.858850 TGCCATTGAGGTTGATGTAGAAT 58.141 39.130 0.00 0.00 40.61 2.40
2393 11717 1.230635 CGTCCTGGGAGTTTGTGCTG 61.231 60.000 0.00 0.00 0.00 4.41
2436 11760 2.745515 AGGACGAGCTACAAAGGAAC 57.254 50.000 0.00 0.00 0.00 3.62
2437 11761 3.159472 TGTAGGACGAGCTACAAAGGAA 58.841 45.455 0.00 0.00 33.69 3.36
2439 11763 3.448686 CATGTAGGACGAGCTACAAAGG 58.551 50.000 0.00 0.00 39.17 3.11
2441 11765 3.093814 TCCATGTAGGACGAGCTACAAA 58.906 45.455 0.00 0.00 43.07 2.83
2443 11767 2.430248 TCCATGTAGGACGAGCTACA 57.570 50.000 0.00 0.00 43.07 2.74
2453 11777 6.485830 TGAAGATAAGAGGTTCCATGTAGG 57.514 41.667 0.00 0.00 39.47 3.18
2454 11778 5.988561 GCTGAAGATAAGAGGTTCCATGTAG 59.011 44.000 0.00 0.00 0.00 2.74
2455 11779 5.163301 GGCTGAAGATAAGAGGTTCCATGTA 60.163 44.000 0.00 0.00 0.00 2.29
2456 11780 4.384647 GGCTGAAGATAAGAGGTTCCATGT 60.385 45.833 0.00 0.00 0.00 3.21
2457 11781 4.133078 GGCTGAAGATAAGAGGTTCCATG 58.867 47.826 0.00 0.00 0.00 3.66
2459 11783 2.505819 GGGCTGAAGATAAGAGGTTCCA 59.494 50.000 0.00 0.00 0.00 3.53
2461 11785 4.080863 TGAAGGGCTGAAGATAAGAGGTTC 60.081 45.833 0.00 0.00 0.00 3.62
2463 11787 3.454858 TGAAGGGCTGAAGATAAGAGGT 58.545 45.455 0.00 0.00 0.00 3.85
2464 11788 4.195416 GTTGAAGGGCTGAAGATAAGAGG 58.805 47.826 0.00 0.00 0.00 3.69
2465 11789 4.836825 TGTTGAAGGGCTGAAGATAAGAG 58.163 43.478 0.00 0.00 0.00 2.85
2466 11790 4.908601 TGTTGAAGGGCTGAAGATAAGA 57.091 40.909 0.00 0.00 0.00 2.10
2467 11791 5.678107 GCAATGTTGAAGGGCTGAAGATAAG 60.678 44.000 0.00 0.00 0.00 1.73
2470 11794 2.494870 GCAATGTTGAAGGGCTGAAGAT 59.505 45.455 0.00 0.00 0.00 2.40
2471 11795 1.888512 GCAATGTTGAAGGGCTGAAGA 59.111 47.619 0.00 0.00 0.00 2.87
2472 11796 1.891150 AGCAATGTTGAAGGGCTGAAG 59.109 47.619 0.00 0.00 32.76 3.02
2473 11797 1.999648 AGCAATGTTGAAGGGCTGAA 58.000 45.000 0.00 0.00 32.76 3.02
2474 11798 1.999648 AAGCAATGTTGAAGGGCTGA 58.000 45.000 0.00 0.00 34.56 4.26
2475 11799 2.036217 TCAAAGCAATGTTGAAGGGCTG 59.964 45.455 0.00 0.00 34.56 4.85
2477 11801 2.297033 TCTCAAAGCAATGTTGAAGGGC 59.703 45.455 0.00 0.00 34.68 5.19
2478 11802 4.381292 GGATCTCAAAGCAATGTTGAAGGG 60.381 45.833 0.00 0.00 34.68 3.95
2479 11803 4.673580 CGGATCTCAAAGCAATGTTGAAGG 60.674 45.833 0.00 0.00 34.68 3.46
2480 11804 4.083110 ACGGATCTCAAAGCAATGTTGAAG 60.083 41.667 0.00 0.00 34.68 3.02
2481 11805 3.820467 ACGGATCTCAAAGCAATGTTGAA 59.180 39.130 0.00 0.00 34.68 2.69
2482 11806 3.411446 ACGGATCTCAAAGCAATGTTGA 58.589 40.909 0.00 0.00 33.97 3.18
2483 11807 3.837213 ACGGATCTCAAAGCAATGTTG 57.163 42.857 0.00 0.00 0.00 3.33
2484 11808 4.579869 AGTACGGATCTCAAAGCAATGTT 58.420 39.130 0.00 0.00 0.00 2.71
2487 11811 5.705441 TGAAAAGTACGGATCTCAAAGCAAT 59.295 36.000 0.00 0.00 0.00 3.56
2488 11812 5.060506 TGAAAAGTACGGATCTCAAAGCAA 58.939 37.500 0.00 0.00 0.00 3.91
2489 11813 4.637276 TGAAAAGTACGGATCTCAAAGCA 58.363 39.130 0.00 0.00 0.00 3.91
2490 11814 5.179555 AGTTGAAAAGTACGGATCTCAAAGC 59.820 40.000 0.00 0.00 0.00 3.51
2491 11815 6.787085 AGTTGAAAAGTACGGATCTCAAAG 57.213 37.500 0.00 0.00 0.00 2.77
2492 11816 7.929785 AGTTAGTTGAAAAGTACGGATCTCAAA 59.070 33.333 0.00 0.00 29.94 2.69
2493 11817 7.439381 AGTTAGTTGAAAAGTACGGATCTCAA 58.561 34.615 0.00 0.00 29.94 3.02
2494 11818 6.989659 AGTTAGTTGAAAAGTACGGATCTCA 58.010 36.000 0.00 0.00 29.94 3.27
2495 11819 7.621633 GCAAGTTAGTTGAAAAGTACGGATCTC 60.622 40.741 3.69 0.00 38.60 2.75
2496 11820 6.147328 GCAAGTTAGTTGAAAAGTACGGATCT 59.853 38.462 3.69 0.00 38.60 2.75
2497 11821 6.073440 TGCAAGTTAGTTGAAAAGTACGGATC 60.073 38.462 3.69 0.00 38.60 3.36
2498 11822 5.761234 TGCAAGTTAGTTGAAAAGTACGGAT 59.239 36.000 3.69 0.00 38.60 4.18
2499 11823 5.117584 TGCAAGTTAGTTGAAAAGTACGGA 58.882 37.500 3.69 0.00 38.60 4.69
2500 11824 5.412526 TGCAAGTTAGTTGAAAAGTACGG 57.587 39.130 3.69 0.00 38.60 4.02
2501 11825 6.252281 TGTTGCAAGTTAGTTGAAAAGTACG 58.748 36.000 0.00 0.00 35.26 3.67
2502 11826 7.253651 GCTTGTTGCAAGTTAGTTGAAAAGTAC 60.254 37.037 0.00 0.00 35.26 2.73
2503 11827 6.750039 GCTTGTTGCAAGTTAGTTGAAAAGTA 59.250 34.615 0.00 0.00 35.26 2.24
2504 11828 5.576774 GCTTGTTGCAAGTTAGTTGAAAAGT 59.423 36.000 0.00 0.00 35.26 2.66
2505 11829 6.024542 GCTTGTTGCAAGTTAGTTGAAAAG 57.975 37.500 0.00 0.00 35.26 2.27
2539 11863 9.703892 TGTTCTTTCATTTGAGAGAAACAAAAA 57.296 25.926 13.31 0.00 43.80 1.94
2540 11864 9.874205 ATGTTCTTTCATTTGAGAGAAACAAAA 57.126 25.926 13.31 1.55 43.80 2.44
2544 11868 9.565213 CCATATGTTCTTTCATTTGAGAGAAAC 57.435 33.333 13.31 9.42 43.80 2.78
2545 11869 9.519191 TCCATATGTTCTTTCATTTGAGAGAAA 57.481 29.630 13.31 6.64 43.80 2.52
2546 11870 8.950210 GTCCATATGTTCTTTCATTTGAGAGAA 58.050 33.333 8.91 8.91 41.24 2.87
2547 11871 8.324306 AGTCCATATGTTCTTTCATTTGAGAGA 58.676 33.333 1.24 0.00 34.04 3.10
2548 11872 8.503458 AGTCCATATGTTCTTTCATTTGAGAG 57.497 34.615 1.24 0.00 31.69 3.20
2549 11873 8.868522 AAGTCCATATGTTCTTTCATTTGAGA 57.131 30.769 1.24 0.00 31.69 3.27
2550 11874 8.733458 TGAAGTCCATATGTTCTTTCATTTGAG 58.267 33.333 1.24 0.00 31.69 3.02
2551 11875 8.634335 TGAAGTCCATATGTTCTTTCATTTGA 57.366 30.769 1.24 0.00 31.69 2.69
2552 11876 9.695526 TTTGAAGTCCATATGTTCTTTCATTTG 57.304 29.630 1.24 0.00 0.00 2.32
2553 11877 9.696917 GTTTGAAGTCCATATGTTCTTTCATTT 57.303 29.630 1.24 0.00 0.00 2.32
2554 11878 9.082313 AGTTTGAAGTCCATATGTTCTTTCATT 57.918 29.630 1.24 0.00 0.00 2.57
2555 11879 8.641498 AGTTTGAAGTCCATATGTTCTTTCAT 57.359 30.769 1.24 0.00 0.00 2.57
2556 11880 8.463930 AAGTTTGAAGTCCATATGTTCTTTCA 57.536 30.769 1.24 3.95 0.00 2.69
2557 11881 9.399403 GAAAGTTTGAAGTCCATATGTTCTTTC 57.601 33.333 1.24 0.00 32.68 2.62
2558 11882 8.360390 GGAAAGTTTGAAGTCCATATGTTCTTT 58.640 33.333 1.24 0.00 0.00 2.52
2559 11883 7.505585 TGGAAAGTTTGAAGTCCATATGTTCTT 59.494 33.333 1.24 5.74 35.22 2.52
2560 11884 7.004086 TGGAAAGTTTGAAGTCCATATGTTCT 58.996 34.615 1.24 0.00 35.22 3.01
2561 11885 7.174946 TCTGGAAAGTTTGAAGTCCATATGTTC 59.825 37.037 1.24 0.00 39.40 3.18
2562 11886 7.004086 TCTGGAAAGTTTGAAGTCCATATGTT 58.996 34.615 1.24 0.00 39.40 2.71
2563 11887 6.542821 TCTGGAAAGTTTGAAGTCCATATGT 58.457 36.000 1.24 0.00 39.40 2.29
2564 11888 7.337689 TGATCTGGAAAGTTTGAAGTCCATATG 59.662 37.037 0.00 0.00 39.40 1.78
2565 11889 7.405292 TGATCTGGAAAGTTTGAAGTCCATAT 58.595 34.615 0.00 0.00 39.40 1.78
2566 11890 6.778821 TGATCTGGAAAGTTTGAAGTCCATA 58.221 36.000 0.00 0.00 39.40 2.74
2567 11891 5.634118 TGATCTGGAAAGTTTGAAGTCCAT 58.366 37.500 0.00 0.00 39.40 3.41
2568 11892 5.047566 TGATCTGGAAAGTTTGAAGTCCA 57.952 39.130 0.00 0.00 37.83 4.02
2569 11893 6.183360 TGTTTGATCTGGAAAGTTTGAAGTCC 60.183 38.462 0.00 0.00 0.00 3.85
2570 11894 6.795399 TGTTTGATCTGGAAAGTTTGAAGTC 58.205 36.000 0.00 0.00 0.00 3.01
2571 11895 6.773976 TGTTTGATCTGGAAAGTTTGAAGT 57.226 33.333 0.00 0.00 0.00 3.01
2572 11896 7.761249 AGTTTGTTTGATCTGGAAAGTTTGAAG 59.239 33.333 0.00 0.00 0.00 3.02
2573 11897 7.610865 AGTTTGTTTGATCTGGAAAGTTTGAA 58.389 30.769 0.00 0.00 0.00 2.69
2574 11898 7.169158 AGTTTGTTTGATCTGGAAAGTTTGA 57.831 32.000 0.00 0.00 0.00 2.69
2575 11899 7.832503 AAGTTTGTTTGATCTGGAAAGTTTG 57.167 32.000 0.00 0.00 0.00 2.93
2576 11900 9.366216 GTAAAGTTTGTTTGATCTGGAAAGTTT 57.634 29.630 0.00 0.00 34.86 2.66
2577 11901 8.527810 TGTAAAGTTTGTTTGATCTGGAAAGTT 58.472 29.630 0.00 0.00 0.00 2.66
2578 11902 8.062065 TGTAAAGTTTGTTTGATCTGGAAAGT 57.938 30.769 0.00 0.00 0.00 2.66
2579 11903 8.807581 GTTGTAAAGTTTGTTTGATCTGGAAAG 58.192 33.333 0.00 0.00 0.00 2.62
2580 11904 8.527810 AGTTGTAAAGTTTGTTTGATCTGGAAA 58.472 29.630 0.00 0.00 0.00 3.13
2581 11905 8.062065 AGTTGTAAAGTTTGTTTGATCTGGAA 57.938 30.769 0.00 0.00 0.00 3.53
2582 11906 7.639113 AGTTGTAAAGTTTGTTTGATCTGGA 57.361 32.000 0.00 0.00 0.00 3.86
2583 11907 7.973388 TGAAGTTGTAAAGTTTGTTTGATCTGG 59.027 33.333 0.00 0.00 40.14 3.86
2584 11908 8.909708 TGAAGTTGTAAAGTTTGTTTGATCTG 57.090 30.769 0.00 0.00 40.14 2.90
2587 11911 9.651913 ACATTGAAGTTGTAAAGTTTGTTTGAT 57.348 25.926 0.00 0.00 40.14 2.57
2588 11912 8.920665 CACATTGAAGTTGTAAAGTTTGTTTGA 58.079 29.630 0.00 0.00 40.14 2.69
2589 11913 8.707839 ACACATTGAAGTTGTAAAGTTTGTTTG 58.292 29.630 0.00 0.00 40.14 2.93
2590 11914 8.707839 CACACATTGAAGTTGTAAAGTTTGTTT 58.292 29.630 0.00 0.00 40.14 2.83
2591 11915 8.085296 TCACACATTGAAGTTGTAAAGTTTGTT 58.915 29.630 0.00 0.00 40.14 2.83
2592 11916 7.598278 TCACACATTGAAGTTGTAAAGTTTGT 58.402 30.769 0.00 0.00 40.14 2.83
2593 11917 8.459521 TTCACACATTGAAGTTGTAAAGTTTG 57.540 30.769 0.00 0.00 40.14 2.93
2594 11918 9.482627 TTTTCACACATTGAAGTTGTAAAGTTT 57.517 25.926 0.00 0.00 45.22 2.66
2595 11919 9.482627 TTTTTCACACATTGAAGTTGTAAAGTT 57.517 25.926 0.00 0.00 45.22 2.66
2723 12047 8.851541 ACATTCTAATTACTACGTGGGAAAAA 57.148 30.769 0.00 0.00 0.00 1.94
2724 12048 8.851541 AACATTCTAATTACTACGTGGGAAAA 57.148 30.769 0.00 0.00 0.00 2.29
2725 12049 8.851541 AAACATTCTAATTACTACGTGGGAAA 57.148 30.769 0.00 0.00 0.00 3.13
2726 12050 8.723311 CAAAACATTCTAATTACTACGTGGGAA 58.277 33.333 0.00 0.00 0.00 3.97
2727 12051 7.879160 ACAAAACATTCTAATTACTACGTGGGA 59.121 33.333 3.26 0.00 0.00 4.37
2728 12052 8.036273 ACAAAACATTCTAATTACTACGTGGG 57.964 34.615 3.26 0.00 0.00 4.61
2729 12053 9.325150 CAACAAAACATTCTAATTACTACGTGG 57.675 33.333 0.00 0.00 0.00 4.94
2730 12054 9.872757 ACAACAAAACATTCTAATTACTACGTG 57.127 29.630 0.00 0.00 0.00 4.49
2732 12056 9.537848 GGACAACAAAACATTCTAATTACTACG 57.462 33.333 0.00 0.00 0.00 3.51
2735 12059 8.082242 GCAGGACAACAAAACATTCTAATTACT 58.918 33.333 0.00 0.00 0.00 2.24
2736 12060 7.865385 TGCAGGACAACAAAACATTCTAATTAC 59.135 33.333 0.00 0.00 0.00 1.89
2737 12061 7.946207 TGCAGGACAACAAAACATTCTAATTA 58.054 30.769 0.00 0.00 0.00 1.40
2738 12062 6.815089 TGCAGGACAACAAAACATTCTAATT 58.185 32.000 0.00 0.00 0.00 1.40
2739 12063 6.403866 TGCAGGACAACAAAACATTCTAAT 57.596 33.333 0.00 0.00 0.00 1.73
2740 12064 5.843673 TGCAGGACAACAAAACATTCTAA 57.156 34.783 0.00 0.00 0.00 2.10
2741 12065 5.843673 TTGCAGGACAACAAAACATTCTA 57.156 34.783 0.00 0.00 31.73 2.10
2742 12066 4.734398 TTGCAGGACAACAAAACATTCT 57.266 36.364 0.00 0.00 31.73 2.40
2743 12067 4.869861 ACTTTGCAGGACAACAAAACATTC 59.130 37.500 0.00 0.00 38.23 2.67
2744 12068 4.630940 CACTTTGCAGGACAACAAAACATT 59.369 37.500 0.00 0.00 38.23 2.71
2745 12069 4.183101 CACTTTGCAGGACAACAAAACAT 58.817 39.130 0.00 0.00 38.23 2.71
2746 12070 3.006323 ACACTTTGCAGGACAACAAAACA 59.994 39.130 0.00 0.00 38.23 2.83
2747 12071 3.367630 CACACTTTGCAGGACAACAAAAC 59.632 43.478 0.00 0.00 38.23 2.43
2748 12072 3.256879 TCACACTTTGCAGGACAACAAAA 59.743 39.130 0.00 0.00 38.23 2.44
2749 12073 2.822561 TCACACTTTGCAGGACAACAAA 59.177 40.909 0.00 0.00 38.23 2.83
2750 12074 2.441410 TCACACTTTGCAGGACAACAA 58.559 42.857 0.00 0.00 38.23 2.83
2751 12075 2.121291 TCACACTTTGCAGGACAACA 57.879 45.000 0.00 0.00 38.23 3.33
2752 12076 2.423538 ACTTCACACTTTGCAGGACAAC 59.576 45.455 0.00 0.00 38.23 3.32
2753 12077 2.722094 ACTTCACACTTTGCAGGACAA 58.278 42.857 0.00 0.00 36.13 3.18
2754 12078 2.418368 ACTTCACACTTTGCAGGACA 57.582 45.000 0.00 0.00 0.00 4.02
2755 12079 3.782889 AAACTTCACACTTTGCAGGAC 57.217 42.857 0.00 0.00 0.00 3.85
2756 12080 5.178623 CGTATAAACTTCACACTTTGCAGGA 59.821 40.000 0.00 0.00 0.00 3.86
2757 12081 5.049680 ACGTATAAACTTCACACTTTGCAGG 60.050 40.000 0.00 0.00 0.00 4.85
2758 12082 5.985781 ACGTATAAACTTCACACTTTGCAG 58.014 37.500 0.00 0.00 0.00 4.41
2759 12083 5.994887 ACGTATAAACTTCACACTTTGCA 57.005 34.783 0.00 0.00 0.00 4.08
2760 12084 6.196571 ACAACGTATAAACTTCACACTTTGC 58.803 36.000 0.00 0.00 0.00 3.68
2761 12085 8.609478 AAACAACGTATAAACTTCACACTTTG 57.391 30.769 0.00 0.00 0.00 2.77
2762 12086 7.637132 CGAAACAACGTATAAACTTCACACTTT 59.363 33.333 0.00 0.00 0.00 2.66
2763 12087 7.121272 CGAAACAACGTATAAACTTCACACTT 58.879 34.615 0.00 0.00 0.00 3.16
2764 12088 6.256321 ACGAAACAACGTATAAACTTCACACT 59.744 34.615 0.00 0.00 44.72 3.55
2765 12089 6.413269 ACGAAACAACGTATAAACTTCACAC 58.587 36.000 0.00 0.00 44.72 3.82
2766 12090 6.586868 ACGAAACAACGTATAAACTTCACA 57.413 33.333 0.00 0.00 44.72 3.58
2767 12091 7.635587 TCAAACGAAACAACGTATAAACTTCAC 59.364 33.333 0.00 0.00 45.83 3.18
2768 12092 7.682824 TCAAACGAAACAACGTATAAACTTCA 58.317 30.769 0.00 0.00 45.83 3.02
2769 12093 8.057742 TCTCAAACGAAACAACGTATAAACTTC 58.942 33.333 0.00 0.00 45.83 3.01
2770 12094 7.908230 TCTCAAACGAAACAACGTATAAACTT 58.092 30.769 0.00 0.00 45.83 2.66
2771 12095 7.436080 TCTCTCAAACGAAACAACGTATAAACT 59.564 33.333 0.00 0.00 45.83 2.66
2772 12096 7.558137 TCTCTCAAACGAAACAACGTATAAAC 58.442 34.615 0.00 0.00 45.83 2.01
2773 12097 7.697352 TCTCTCAAACGAAACAACGTATAAA 57.303 32.000 0.00 0.00 45.83 1.40
2774 12098 7.697352 TTCTCTCAAACGAAACAACGTATAA 57.303 32.000 0.00 0.00 45.83 0.98
2775 12099 7.558137 GTTTCTCTCAAACGAAACAACGTATA 58.442 34.615 9.30 0.00 45.05 1.47
2776 12100 6.416514 GTTTCTCTCAAACGAAACAACGTAT 58.583 36.000 9.30 0.00 45.05 3.06
2777 12101 5.788467 GTTTCTCTCAAACGAAACAACGTA 58.212 37.500 9.30 0.00 45.05 3.57
2778 12102 4.644954 GTTTCTCTCAAACGAAACAACGT 58.355 39.130 9.30 0.00 45.05 3.99
2783 12107 8.102112 GTCATTTTTGTTTCTCTCAAACGAAAC 58.898 33.333 10.74 7.68 45.59 2.78
2784 12108 7.810282 TGTCATTTTTGTTTCTCTCAAACGAAA 59.190 29.630 8.06 8.06 40.07 3.46
2785 12109 7.309177 TGTCATTTTTGTTTCTCTCAAACGAA 58.691 30.769 0.00 0.00 35.05 3.85
2786 12110 6.847400 TGTCATTTTTGTTTCTCTCAAACGA 58.153 32.000 0.00 0.00 35.05 3.85
2787 12111 7.504922 TTGTCATTTTTGTTTCTCTCAAACG 57.495 32.000 0.00 0.00 35.05 3.60
2788 12112 9.693157 CATTTGTCATTTTTGTTTCTCTCAAAC 57.307 29.630 0.00 0.00 35.05 2.93
2789 12113 9.434420 ACATTTGTCATTTTTGTTTCTCTCAAA 57.566 25.926 0.00 0.00 33.76 2.69
2790 12114 8.871862 CACATTTGTCATTTTTGTTTCTCTCAA 58.128 29.630 0.00 0.00 0.00 3.02
2791 12115 7.010367 GCACATTTGTCATTTTTGTTTCTCTCA 59.990 33.333 0.00 0.00 0.00 3.27
2792 12116 7.339953 GCACATTTGTCATTTTTGTTTCTCTC 58.660 34.615 0.00 0.00 0.00 3.20
2793 12117 6.258507 GGCACATTTGTCATTTTTGTTTCTCT 59.741 34.615 0.00 0.00 0.00 3.10
2794 12118 6.258507 AGGCACATTTGTCATTTTTGTTTCTC 59.741 34.615 0.00 0.00 0.00 2.87
2795 12119 6.037391 CAGGCACATTTGTCATTTTTGTTTCT 59.963 34.615 0.00 0.00 0.00 2.52
2796 12120 6.193761 CAGGCACATTTGTCATTTTTGTTTC 58.806 36.000 0.00 0.00 0.00 2.78
2797 12121 5.448904 GCAGGCACATTTGTCATTTTTGTTT 60.449 36.000 0.00 0.00 0.00 2.83
2798 12122 4.035441 GCAGGCACATTTGTCATTTTTGTT 59.965 37.500 0.00 0.00 0.00 2.83
2799 12123 3.560896 GCAGGCACATTTGTCATTTTTGT 59.439 39.130 0.00 0.00 0.00 2.83
2800 12124 3.560481 TGCAGGCACATTTGTCATTTTTG 59.440 39.130 0.00 0.00 0.00 2.44
2801 12125 3.560896 GTGCAGGCACATTTGTCATTTTT 59.439 39.130 18.84 0.00 45.53 1.94
2802 12126 3.132925 GTGCAGGCACATTTGTCATTTT 58.867 40.909 18.84 0.00 45.53 1.82
2803 12127 2.758009 GTGCAGGCACATTTGTCATTT 58.242 42.857 18.84 0.00 45.53 2.32
2804 12128 1.336148 CGTGCAGGCACATTTGTCATT 60.336 47.619 22.69 0.00 46.47 2.57
2805 12129 0.241749 CGTGCAGGCACATTTGTCAT 59.758 50.000 22.69 0.00 46.47 3.06
2806 12130 1.653667 CGTGCAGGCACATTTGTCA 59.346 52.632 22.69 0.00 46.47 3.58
2807 12131 1.081242 CCGTGCAGGCACATTTGTC 60.081 57.895 22.69 0.00 46.47 3.18
2808 12132 0.895100 ATCCGTGCAGGCACATTTGT 60.895 50.000 22.69 2.67 46.47 2.83
2809 12133 0.179156 GATCCGTGCAGGCACATTTG 60.179 55.000 22.69 7.51 46.47 2.32
2810 12134 0.322816 AGATCCGTGCAGGCACATTT 60.323 50.000 22.69 7.35 46.47 2.32
2811 12135 0.322816 AAGATCCGTGCAGGCACATT 60.323 50.000 22.69 7.69 46.47 2.71
2812 12136 1.028330 CAAGATCCGTGCAGGCACAT 61.028 55.000 22.69 10.61 46.47 3.21
2813 12137 1.672030 CAAGATCCGTGCAGGCACA 60.672 57.895 22.69 6.08 46.47 4.57
2814 12138 0.745845 ATCAAGATCCGTGCAGGCAC 60.746 55.000 14.20 14.20 43.01 5.01
2815 12139 0.745486 CATCAAGATCCGTGCAGGCA 60.745 55.000 0.00 0.00 40.77 4.75
2816 12140 2.020131 CATCAAGATCCGTGCAGGC 58.980 57.895 0.00 0.00 40.77 4.85
2817 12141 1.442526 GGCATCAAGATCCGTGCAGG 61.443 60.000 0.00 0.00 39.27 4.85
2818 12142 0.745486 TGGCATCAAGATCCGTGCAG 60.745 55.000 10.20 0.00 39.27 4.41
2819 12143 0.322366 TTGGCATCAAGATCCGTGCA 60.322 50.000 10.20 0.00 39.27 4.57
2820 12144 0.810648 TTTGGCATCAAGATCCGTGC 59.189 50.000 0.00 0.00 33.98 5.34
2821 12145 3.441163 CATTTTGGCATCAAGATCCGTG 58.559 45.455 0.00 0.00 33.98 4.94
2822 12146 2.428171 CCATTTTGGCATCAAGATCCGT 59.572 45.455 0.00 0.00 33.98 4.69
2823 12147 2.689471 TCCATTTTGGCATCAAGATCCG 59.311 45.455 0.00 0.00 37.47 4.18
2824 12148 4.502604 CCATCCATTTTGGCATCAAGATCC 60.503 45.833 0.00 0.00 37.47 3.36
2825 12149 4.628074 CCATCCATTTTGGCATCAAGATC 58.372 43.478 0.00 0.00 37.47 2.75
2826 12150 4.682778 CCATCCATTTTGGCATCAAGAT 57.317 40.909 0.00 0.00 37.47 2.40
2835 12159 5.244626 CCCTTATCTTAGCCATCCATTTTGG 59.755 44.000 0.00 0.00 39.43 3.28
2836 12160 5.244626 CCCCTTATCTTAGCCATCCATTTTG 59.755 44.000 0.00 0.00 0.00 2.44
2837 12161 5.103086 ACCCCTTATCTTAGCCATCCATTTT 60.103 40.000 0.00 0.00 0.00 1.82
2838 12162 4.420214 ACCCCTTATCTTAGCCATCCATTT 59.580 41.667 0.00 0.00 0.00 2.32
2839 12163 3.990245 ACCCCTTATCTTAGCCATCCATT 59.010 43.478 0.00 0.00 0.00 3.16
2840 12164 3.613559 ACCCCTTATCTTAGCCATCCAT 58.386 45.455 0.00 0.00 0.00 3.41
2841 12165 3.074857 ACCCCTTATCTTAGCCATCCA 57.925 47.619 0.00 0.00 0.00 3.41
2842 12166 3.263681 GGTACCCCTTATCTTAGCCATCC 59.736 52.174 0.00 0.00 0.00 3.51
2843 12167 3.056035 CGGTACCCCTTATCTTAGCCATC 60.056 52.174 6.25 0.00 0.00 3.51
2844 12168 2.904434 CGGTACCCCTTATCTTAGCCAT 59.096 50.000 6.25 0.00 0.00 4.40
2845 12169 2.322658 CGGTACCCCTTATCTTAGCCA 58.677 52.381 6.25 0.00 0.00 4.75
2846 12170 2.036862 CACGGTACCCCTTATCTTAGCC 59.963 54.545 6.25 0.00 0.00 3.93
2847 12171 2.697229 ACACGGTACCCCTTATCTTAGC 59.303 50.000 6.25 0.00 0.00 3.09
2848 12172 4.022503 GCTACACGGTACCCCTTATCTTAG 60.023 50.000 6.25 0.00 0.00 2.18
2849 12173 3.891366 GCTACACGGTACCCCTTATCTTA 59.109 47.826 6.25 0.00 0.00 2.10
2850 12174 2.697229 GCTACACGGTACCCCTTATCTT 59.303 50.000 6.25 0.00 0.00 2.40
2851 12175 2.091444 AGCTACACGGTACCCCTTATCT 60.091 50.000 6.25 0.00 0.00 1.98
2852 12176 2.295629 GAGCTACACGGTACCCCTTATC 59.704 54.545 6.25 0.00 0.00 1.75
2853 12177 2.314246 GAGCTACACGGTACCCCTTAT 58.686 52.381 6.25 0.00 0.00 1.73
2854 12178 1.686115 GGAGCTACACGGTACCCCTTA 60.686 57.143 6.25 0.00 0.00 2.69
2855 12179 0.974525 GGAGCTACACGGTACCCCTT 60.975 60.000 6.25 0.00 0.00 3.95
2856 12180 1.380920 GGAGCTACACGGTACCCCT 60.381 63.158 6.25 0.00 0.00 4.79
2857 12181 1.673808 CTGGAGCTACACGGTACCCC 61.674 65.000 6.25 0.00 0.00 4.95
2858 12182 1.814527 CTGGAGCTACACGGTACCC 59.185 63.158 6.25 0.00 0.00 3.69
2859 12183 1.141234 GCTGGAGCTACACGGTACC 59.859 63.158 0.16 0.16 38.21 3.34
2860 12184 4.808649 GCTGGAGCTACACGGTAC 57.191 61.111 0.00 0.00 38.21 3.34
2870 12194 1.266989 GTGGTTTTGTGTAGCTGGAGC 59.733 52.381 0.00 0.00 42.49 4.70
2871 12195 2.290641 GTGTGGTTTTGTGTAGCTGGAG 59.709 50.000 0.00 0.00 0.00 3.86
2872 12196 2.092646 AGTGTGGTTTTGTGTAGCTGGA 60.093 45.455 0.00 0.00 0.00 3.86
2873 12197 2.290641 GAGTGTGGTTTTGTGTAGCTGG 59.709 50.000 0.00 0.00 0.00 4.85
2874 12198 3.002656 CAGAGTGTGGTTTTGTGTAGCTG 59.997 47.826 0.00 0.00 0.00 4.24
2875 12199 3.206150 CAGAGTGTGGTTTTGTGTAGCT 58.794 45.455 0.00 0.00 0.00 3.32
2876 12200 2.943033 ACAGAGTGTGGTTTTGTGTAGC 59.057 45.455 0.00 0.00 0.00 3.58
2877 12201 4.536364 CACAGAGTGTGGTTTTGTGTAG 57.464 45.455 0.00 0.00 44.27 2.74
2887 12211 4.621510 ATGTACATACAGCACAGAGTGTGG 60.622 45.833 6.56 0.00 42.11 4.17
2888 12212 4.498241 ATGTACATACAGCACAGAGTGTG 58.502 43.478 6.56 2.56 43.42 3.82
2889 12213 4.808414 ATGTACATACAGCACAGAGTGT 57.192 40.909 6.56 0.00 39.92 3.55
2890 12214 8.352942 TCTATAATGTACATACAGCACAGAGTG 58.647 37.037 9.21 0.00 39.92 3.51
2891 12215 8.353684 GTCTATAATGTACATACAGCACAGAGT 58.646 37.037 9.21 0.00 39.92 3.24
2892 12216 8.352942 TGTCTATAATGTACATACAGCACAGAG 58.647 37.037 9.21 0.00 39.92 3.35
2893 12217 8.135529 GTGTCTATAATGTACATACAGCACAGA 58.864 37.037 9.21 2.95 39.92 3.41
2894 12218 7.920682 TGTGTCTATAATGTACATACAGCACAG 59.079 37.037 21.24 11.01 39.92 3.66
2895 12219 7.777095 TGTGTCTATAATGTACATACAGCACA 58.223 34.615 21.24 21.24 39.92 4.57
2933 12257 3.616219 ACTAAAGTGTGTGCTTGTCCAA 58.384 40.909 0.00 0.00 0.00 3.53
2969 12325 7.041098 AGGTTTAGAAATGTGACTGCAGTTTAG 60.041 37.037 22.65 0.00 0.00 1.85
3004 12360 0.749454 AGATGGGGCTCGTTGAATGC 60.749 55.000 0.00 0.00 0.00 3.56
3013 12369 3.212685 CTTGAGAATTGAGATGGGGCTC 58.787 50.000 0.00 0.00 35.46 4.70
3034 12390 8.139521 AGTTAGTAGCTTGTAGTTTGACAAAC 57.860 34.615 21.09 21.09 38.80 2.93
3035 12391 9.820725 TTAGTTAGTAGCTTGTAGTTTGACAAA 57.179 29.630 0.00 0.00 38.80 2.83
3037 12393 9.820725 TTTTAGTTAGTAGCTTGTAGTTTGACA 57.179 29.630 0.00 0.00 0.00 3.58
3068 12426 6.310197 CACTCAGCTTTAGTAAGATGTTTGC 58.690 40.000 3.46 0.00 45.63 3.68
3085 12443 1.167851 TGCATTAAGTGGCACTCAGC 58.832 50.000 22.31 20.75 44.65 4.26
3290 12693 7.500992 TGAATTACTCACACTCTTATGATCCC 58.499 38.462 0.00 0.00 0.00 3.85
3311 12714 7.389232 TGAATAAGATCCGTGCAGATATGAAT 58.611 34.615 0.00 0.00 0.00 2.57
3345 12818 3.681593 TGGCCATTTGACATTTCCAAG 57.318 42.857 0.00 0.00 0.00 3.61
3373 12846 9.871238 TTAGTTTCACTCCATAGTAAGAATGTC 57.129 33.333 0.00 0.00 33.48 3.06
3379 12855 8.478877 AGTGGATTAGTTTCACTCCATAGTAAG 58.521 37.037 0.00 0.00 39.81 2.34
3881 14071 8.601845 TCTAACAGAAAATGAAACGAAGATGA 57.398 30.769 0.00 0.00 0.00 2.92
3939 14129 2.490903 AGTTGGCAGCTGACATGAATTC 59.509 45.455 26.07 9.87 30.06 2.17
3984 14183 1.005805 ACTGCAGGGATGGCAATGTAA 59.994 47.619 19.93 0.00 41.39 2.41
4020 14225 1.880027 CAAAAGAGTACTGCCACCACC 59.120 52.381 0.00 0.00 0.00 4.61
4023 14228 1.897560 AGCAAAAGAGTACTGCCACC 58.102 50.000 0.00 0.00 36.73 4.61
4028 14233 8.462143 TCGTCTTATAAAGCAAAAGAGTACTG 57.538 34.615 0.00 0.00 30.22 2.74
4097 14317 2.685388 GCTCATTGACTAGGAAAAGGGC 59.315 50.000 0.00 0.00 0.00 5.19
4100 14320 6.402222 AGTAGTGCTCATTGACTAGGAAAAG 58.598 40.000 0.00 0.00 0.00 2.27
4113 14333 5.877012 CACAACCAGAATTAGTAGTGCTCAT 59.123 40.000 0.00 0.00 0.00 2.90
4392 14619 3.260380 ACTCCTTGTCACCTTGATCAGAG 59.740 47.826 0.00 0.00 0.00 3.35
4461 14693 8.514594 CCTTCACACAATATTCACAATGTAGTT 58.485 33.333 0.00 0.00 0.00 2.24
4465 14697 6.716628 ACTCCTTCACACAATATTCACAATGT 59.283 34.615 0.00 0.00 0.00 2.71
4472 14704 5.642063 TCCGAAACTCCTTCACACAATATTC 59.358 40.000 0.00 0.00 33.17 1.75
4723 15486 6.569179 TTGCTTCCTACAAATAGTTTGACC 57.431 37.500 9.21 0.00 43.26 4.02
4973 15763 2.782341 AGCAATCCTAGCCTCCATCTTT 59.218 45.455 0.00 0.00 0.00 2.52
5042 15835 2.021457 GTGCCAACAAGTGTGGTAGTT 58.979 47.619 0.00 0.00 0.00 2.24
5214 16007 3.266230 CTTGCGCCATTCGTTGCCA 62.266 57.895 4.18 0.00 41.07 4.92
5291 16084 1.691434 GCAATTTCCACCACCTTCCAA 59.309 47.619 0.00 0.00 0.00 3.53
5312 16105 3.599343 TGCATACTCAGTGCACTTTAGG 58.401 45.455 18.94 11.50 46.76 2.69
5403 16196 0.107410 TTTGTGTCCTCAACGGTGCT 60.107 50.000 0.00 0.00 0.00 4.40
5475 16271 3.992260 AGACCGATCATCGAAGTAAGG 57.008 47.619 9.16 0.00 43.74 2.69
5528 16324 5.646360 CACCTTCTTAACATTATGTTCCGGT 59.354 40.000 14.29 11.18 40.22 5.28
5548 16344 0.467844 TGTGGACATTGCAAGCACCT 60.468 50.000 4.94 0.00 0.00 4.00
5669 16466 8.589335 TGAGAGACACTACATTTAAACTTGAC 57.411 34.615 0.00 0.00 0.00 3.18
5746 16543 5.062683 CCCACTTCGAAGCATAATATCGATG 59.937 44.000 24.86 10.55 44.14 3.84
5747 16544 5.171476 CCCACTTCGAAGCATAATATCGAT 58.829 41.667 24.86 2.16 44.14 3.59
5756 16553 1.675641 GTGGCCCACTTCGAAGCAT 60.676 57.895 24.86 3.53 0.00 3.79
5762 16559 1.921869 AATAGGGGTGGCCCACTTCG 61.922 60.000 14.71 0.00 44.37 3.79
5857 16654 2.038557 GGGTGCCAATCATACCGATACT 59.961 50.000 0.00 0.00 35.31 2.12
5863 16660 1.750778 CACAAGGGTGCCAATCATACC 59.249 52.381 0.00 0.00 38.37 2.73
5881 16678 5.807011 GTGTATGGATTGAATTTCCAAGCAC 59.193 40.000 14.02 14.02 45.99 4.40
5897 16694 1.735926 TGTCCTTGGGTGTGTATGGA 58.264 50.000 0.00 0.00 0.00 3.41
5917 16714 1.881324 CACCTCACACATGCATGTTGA 59.119 47.619 29.48 28.32 39.39 3.18
5934 16731 1.525619 GTAACTGTGCAGTCGAACACC 59.474 52.381 5.22 0.00 41.58 4.16
5944 16741 4.878397 CCAAAATTTTTGGGTAACTGTGCA 59.122 37.500 26.61 0.00 35.96 4.57
5968 16765 0.919710 ACAGGAGTAGGATTTGGGGC 59.080 55.000 0.00 0.00 0.00 5.80
6013 17125 2.439156 GGCGGCTCTGCAATTCCT 60.439 61.111 0.00 0.00 36.28 3.36
6020 17132 3.687321 TTCTCCATGGCGGCTCTGC 62.687 63.158 11.43 0.00 33.14 4.26
6021 17133 0.465097 ATTTCTCCATGGCGGCTCTG 60.465 55.000 11.43 7.85 33.14 3.35
6047 17159 2.760092 GTGGCCACAATTGATGTACCAT 59.240 45.455 31.23 0.00 44.66 3.55
6167 17280 1.655484 TGCTATGTGTCCGCTTGATG 58.345 50.000 0.00 0.00 0.00 3.07
6209 17322 2.104792 ACTGTCTATGTTGGCTGTGTGT 59.895 45.455 0.00 0.00 0.00 3.72
6214 17327 3.257393 GTCAGACTGTCTATGTTGGCTG 58.743 50.000 10.47 0.00 0.00 4.85
6234 17347 6.407074 GCCACTATGTCCTTTCTATACTGTGT 60.407 42.308 0.00 0.00 0.00 3.72
6237 17350 6.412362 AGCCACTATGTCCTTTCTATACTG 57.588 41.667 0.00 0.00 0.00 2.74
6244 17357 7.553044 ACTTTATTGTAGCCACTATGTCCTTTC 59.447 37.037 0.00 0.00 0.00 2.62
6267 17380 5.762218 GCATAGTTTCAGCCTCATATGACTT 59.238 40.000 0.00 0.00 0.00 3.01
6319 17432 0.039527 GGTGCAGGCGTACTTTTTGG 60.040 55.000 0.00 0.00 0.00 3.28
6322 17435 2.290071 ACATAGGTGCAGGCGTACTTTT 60.290 45.455 0.00 0.00 0.00 2.27
6334 17447 1.339342 ACCGGTGGTAAACATAGGTGC 60.339 52.381 6.12 0.00 39.29 5.01
6339 17452 3.819902 GGTTGAAACCGGTGGTAAACATA 59.180 43.478 8.52 0.00 39.66 2.29
6357 17470 0.516877 CAGTGGTGTGTATGCGGTTG 59.483 55.000 0.00 0.00 0.00 3.77
6361 17474 2.803386 TGTTTACAGTGGTGTGTATGCG 59.197 45.455 0.00 0.00 37.52 4.73
6374 17487 4.992319 TGGAGTATCAACCGTTGTTTACAG 59.008 41.667 19.76 0.00 36.25 2.74
6402 17515 4.282950 TCGTACGTGGTCTATGCTTTAG 57.717 45.455 16.05 0.00 0.00 1.85
6412 17711 1.922545 GTATTGGCTTCGTACGTGGTC 59.077 52.381 16.05 11.10 0.00 4.02
6417 17716 6.588756 ACCATTATATGTATTGGCTTCGTACG 59.411 38.462 9.53 9.53 35.62 3.67
6450 17749 4.202253 GGCAAAACTTCTTCTCCCATGTTT 60.202 41.667 0.00 0.00 0.00 2.83
6451 17750 3.321968 GGCAAAACTTCTTCTCCCATGTT 59.678 43.478 0.00 0.00 0.00 2.71
6452 17751 2.893489 GGCAAAACTTCTTCTCCCATGT 59.107 45.455 0.00 0.00 0.00 3.21
6484 17798 7.195374 TCTGCCTTACTATGATAGTTTTGGT 57.805 36.000 10.78 0.00 40.14 3.67
6485 17799 8.682936 AATCTGCCTTACTATGATAGTTTTGG 57.317 34.615 10.78 11.14 40.14 3.28
6493 17807 8.223330 AGATGGAAAAATCTGCCTTACTATGAT 58.777 33.333 0.00 0.00 35.54 2.45
6543 17857 4.052159 AGTCACTGGCTCGATGAAATAG 57.948 45.455 0.00 0.00 0.00 1.73
6552 17866 4.627467 GCCAATATATAAGTCACTGGCTCG 59.373 45.833 12.97 0.00 43.61 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.