Multiple sequence alignment - TraesCS1B01G347600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G347600 chr1B 100.000 3137 0 0 1 3137 576689562 576686426 0.000000e+00 5794.0
1 TraesCS1B01G347600 chr1A 92.693 2518 126 25 357 2841 521878964 521876472 0.000000e+00 3578.0
2 TraesCS1B01G347600 chr1A 90.543 571 37 7 2373 2941 521872594 521872039 0.000000e+00 739.0
3 TraesCS1B01G347600 chr1D 95.601 2205 68 9 357 2543 426871274 426869081 0.000000e+00 3507.0
4 TraesCS1B01G347600 chr1D 91.259 572 33 9 2373 2941 426760163 426759606 0.000000e+00 763.0
5 TraesCS1B01G347600 chr1D 91.234 308 18 4 2540 2841 426868003 426867699 8.100000e-111 411.0
6 TraesCS1B01G347600 chr1D 86.667 60 8 0 1691 1750 415141399 415141340 2.020000e-07 67.6
7 TraesCS1B01G347600 chr3D 82.428 313 40 11 1441 1750 404441664 404441364 3.100000e-65 259.0
8 TraesCS1B01G347600 chr3A 81.470 313 43 11 1441 1750 526865056 526864756 3.130000e-60 243.0
9 TraesCS1B01G347600 chr3B 81.150 313 44 10 1441 1750 530610882 530610582 1.450000e-58 237.0
10 TraesCS1B01G347600 chr3B 78.113 265 28 13 100 340 567533617 567533359 1.170000e-29 141.0
11 TraesCS1B01G347600 chr7A 87.288 118 11 3 96 213 593072795 593072682 7.060000e-27 132.0
12 TraesCS1B01G347600 chr4D 77.206 272 29 16 96 342 327843127 327843390 9.130000e-26 128.0
13 TraesCS1B01G347600 chr4D 86.842 114 14 1 100 213 455891212 455891324 3.280000e-25 126.0
14 TraesCS1B01G347600 chr5A 85.088 114 16 1 100 213 657646814 657646926 7.110000e-22 115.0
15 TraesCS1B01G347600 chr2B 77.169 219 37 8 100 312 53671665 53671454 7.110000e-22 115.0
16 TraesCS1B01G347600 chr2B 82.812 128 19 3 216 343 490800320 490800196 9.200000e-21 111.0
17 TraesCS1B01G347600 chr2B 86.076 79 7 4 281 356 132513695 132513618 7.210000e-12 82.4
18 TraesCS1B01G347600 chr6B 90.141 71 7 0 100 170 661547237 661547167 3.330000e-15 93.5
19 TraesCS1B01G347600 chr6B 88.000 75 5 3 274 348 544633200 544633270 5.570000e-13 86.1
20 TraesCS1B01G347600 chr6B 78.832 137 19 7 216 346 545198218 545198086 2.000000e-12 84.2
21 TraesCS1B01G347600 chr2D 94.915 59 3 0 100 158 16989136 16989078 3.330000e-15 93.5
22 TraesCS1B01G347600 chr4A 97.222 36 1 0 48 83 613571682 613571717 9.390000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G347600 chr1B 576686426 576689562 3136 True 5794.0 5794 100.0000 1 3137 1 chr1B.!!$R1 3136
1 TraesCS1B01G347600 chr1A 521872039 521878964 6925 True 2158.5 3578 91.6180 357 2941 2 chr1A.!!$R1 2584
2 TraesCS1B01G347600 chr1D 426867699 426871274 3575 True 1959.0 3507 93.4175 357 2841 2 chr1D.!!$R3 2484
3 TraesCS1B01G347600 chr1D 426759606 426760163 557 True 763.0 763 91.2590 2373 2941 1 chr1D.!!$R2 568

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
579 580 0.036010 AACTCCGGGCTCACTCAATG 60.036 55.0 0.0 0.0 0.0 2.82 F
937 949 0.249447 GCCCTGCTTGTTTGGTTCAC 60.249 55.0 0.0 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1763 1775 0.040058 TGCATGAGTTGGGCCTGAAT 59.96 50.0 4.53 0.0 0.00 2.57 R
2730 8202 0.380378 GGCGCGAAAGGCAAATATCA 59.62 50.0 12.10 0.0 43.84 2.15 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.372852 AAAACTAGGCCCGAGAGCA 58.627 52.632 9.24 0.00 0.00 4.26
19 20 0.250513 AAAACTAGGCCCGAGAGCAG 59.749 55.000 9.24 0.00 0.00 4.24
20 21 0.905337 AAACTAGGCCCGAGAGCAGT 60.905 55.000 9.24 0.00 0.00 4.40
21 22 1.608717 AACTAGGCCCGAGAGCAGTG 61.609 60.000 9.24 0.00 0.00 3.66
22 23 2.037367 TAGGCCCGAGAGCAGTGT 59.963 61.111 0.00 0.00 0.00 3.55
23 24 2.010582 CTAGGCCCGAGAGCAGTGTC 62.011 65.000 0.00 0.00 0.00 3.67
24 25 4.803426 GGCCCGAGAGCAGTGTCG 62.803 72.222 0.00 0.00 39.16 4.35
28 29 4.803426 CGAGAGCAGTGTCGGGCC 62.803 72.222 0.00 0.00 35.85 5.80
29 30 4.803426 GAGAGCAGTGTCGGGCCG 62.803 72.222 22.51 22.51 0.00 6.13
47 48 3.865071 GACCGGGTTGGGCTTTTT 58.135 55.556 6.32 0.00 45.46 1.94
48 49 1.663739 GACCGGGTTGGGCTTTTTC 59.336 57.895 6.32 0.00 45.46 2.29
49 50 2.137425 GACCGGGTTGGGCTTTTTCG 62.137 60.000 6.32 0.00 45.46 3.46
50 51 2.648454 CGGGTTGGGCTTTTTCGG 59.352 61.111 0.00 0.00 0.00 4.30
51 52 2.926420 CGGGTTGGGCTTTTTCGGG 61.926 63.158 0.00 0.00 0.00 5.14
52 53 2.342279 GGTTGGGCTTTTTCGGGC 59.658 61.111 0.00 0.00 0.00 6.13
53 54 2.207229 GGTTGGGCTTTTTCGGGCT 61.207 57.895 0.00 0.00 0.00 5.19
54 55 1.006220 GTTGGGCTTTTTCGGGCTG 60.006 57.895 0.00 0.00 0.00 4.85
55 56 2.206536 TTGGGCTTTTTCGGGCTGG 61.207 57.895 0.00 0.00 0.00 4.85
56 57 2.282887 GGGCTTTTTCGGGCTGGA 60.283 61.111 0.00 0.00 0.00 3.86
57 58 2.636412 GGGCTTTTTCGGGCTGGAC 61.636 63.158 0.00 0.00 0.00 4.02
58 59 2.636412 GGCTTTTTCGGGCTGGACC 61.636 63.158 0.00 0.00 37.93 4.46
69 70 3.322466 CTGGACCGGGTCAGGCTT 61.322 66.667 27.32 0.00 33.68 4.35
70 71 2.852075 TGGACCGGGTCAGGCTTT 60.852 61.111 27.32 0.00 33.68 3.51
71 72 2.411765 CTGGACCGGGTCAGGCTTTT 62.412 60.000 27.32 0.00 33.68 2.27
72 73 1.228459 GGACCGGGTCAGGCTTTTT 60.228 57.895 27.32 0.00 33.68 1.94
97 98 2.999063 GGCTGCAAATGGCCAGGT 60.999 61.111 13.05 0.00 46.84 4.00
98 99 1.682005 GGCTGCAAATGGCCAGGTA 60.682 57.895 13.05 1.67 46.84 3.08
99 100 1.044790 GGCTGCAAATGGCCAGGTAT 61.045 55.000 13.05 0.00 46.84 2.73
100 101 1.691196 GCTGCAAATGGCCAGGTATA 58.309 50.000 13.05 0.00 43.89 1.47
101 102 2.242043 GCTGCAAATGGCCAGGTATAT 58.758 47.619 13.05 0.00 43.89 0.86
102 103 2.229784 GCTGCAAATGGCCAGGTATATC 59.770 50.000 13.05 0.00 43.89 1.63
103 104 2.821969 CTGCAAATGGCCAGGTATATCC 59.178 50.000 13.05 0.00 43.89 2.59
104 105 2.171003 GCAAATGGCCAGGTATATCCC 58.829 52.381 13.05 0.00 34.61 3.85
105 106 2.807676 CAAATGGCCAGGTATATCCCC 58.192 52.381 13.05 0.00 36.75 4.81
106 107 2.109834 CAAATGGCCAGGTATATCCCCA 59.890 50.000 13.05 0.00 36.75 4.96
107 108 1.673767 ATGGCCAGGTATATCCCCAG 58.326 55.000 13.05 0.00 36.75 4.45
108 109 1.133809 TGGCCAGGTATATCCCCAGC 61.134 60.000 0.00 0.00 36.75 4.85
109 110 1.685820 GCCAGGTATATCCCCAGCC 59.314 63.158 0.00 0.00 36.75 4.85
110 111 1.853250 GCCAGGTATATCCCCAGCCC 61.853 65.000 0.00 0.00 36.75 5.19
111 112 0.475632 CCAGGTATATCCCCAGCCCA 60.476 60.000 0.00 0.00 36.75 5.36
112 113 1.444933 CAGGTATATCCCCAGCCCAA 58.555 55.000 0.00 0.00 36.75 4.12
113 114 1.995542 CAGGTATATCCCCAGCCCAAT 59.004 52.381 0.00 0.00 36.75 3.16
114 115 3.189606 CAGGTATATCCCCAGCCCAATA 58.810 50.000 0.00 0.00 36.75 1.90
115 116 3.200825 CAGGTATATCCCCAGCCCAATAG 59.799 52.174 0.00 0.00 36.75 1.73
116 117 2.509964 GGTATATCCCCAGCCCAATAGG 59.490 54.545 0.00 0.00 39.47 2.57
132 133 3.284336 GGGTTCAAATCCCGGTGC 58.716 61.111 0.00 0.00 35.27 5.01
133 134 1.304134 GGGTTCAAATCCCGGTGCT 60.304 57.895 0.00 0.00 35.27 4.40
134 135 1.313091 GGGTTCAAATCCCGGTGCTC 61.313 60.000 0.00 0.00 35.27 4.26
135 136 0.608035 GGTTCAAATCCCGGTGCTCA 60.608 55.000 0.00 0.00 0.00 4.26
136 137 0.521735 GTTCAAATCCCGGTGCTCAC 59.478 55.000 0.00 0.00 0.00 3.51
137 138 0.109532 TTCAAATCCCGGTGCTCACA 59.890 50.000 0.00 0.00 0.00 3.58
138 139 0.327924 TCAAATCCCGGTGCTCACAT 59.672 50.000 0.00 0.00 0.00 3.21
139 140 1.176527 CAAATCCCGGTGCTCACATT 58.823 50.000 0.00 0.00 0.00 2.71
140 141 1.545582 CAAATCCCGGTGCTCACATTT 59.454 47.619 0.00 0.00 0.00 2.32
141 142 2.752354 CAAATCCCGGTGCTCACATTTA 59.248 45.455 0.00 0.00 0.00 1.40
142 143 3.297134 AATCCCGGTGCTCACATTTAT 57.703 42.857 0.00 0.00 0.00 1.40
143 144 2.325583 TCCCGGTGCTCACATTTATC 57.674 50.000 0.00 0.00 0.00 1.75
144 145 1.134220 TCCCGGTGCTCACATTTATCC 60.134 52.381 0.00 0.00 0.00 2.59
145 146 1.134098 CCCGGTGCTCACATTTATCCT 60.134 52.381 0.00 0.00 0.00 3.24
146 147 1.942657 CCGGTGCTCACATTTATCCTG 59.057 52.381 0.00 0.00 0.00 3.86
147 148 1.331756 CGGTGCTCACATTTATCCTGC 59.668 52.381 2.21 0.00 0.00 4.85
148 149 2.368439 GGTGCTCACATTTATCCTGCA 58.632 47.619 2.21 0.00 0.00 4.41
149 150 2.954318 GGTGCTCACATTTATCCTGCAT 59.046 45.455 2.21 0.00 0.00 3.96
150 151 3.382546 GGTGCTCACATTTATCCTGCATT 59.617 43.478 2.21 0.00 0.00 3.56
151 152 4.142093 GGTGCTCACATTTATCCTGCATTT 60.142 41.667 2.21 0.00 0.00 2.32
152 153 5.067674 GGTGCTCACATTTATCCTGCATTTA 59.932 40.000 2.21 0.00 0.00 1.40
153 154 6.239120 GGTGCTCACATTTATCCTGCATTTAT 60.239 38.462 2.21 0.00 0.00 1.40
154 155 7.205297 GTGCTCACATTTATCCTGCATTTATT 58.795 34.615 0.00 0.00 0.00 1.40
155 156 7.707893 GTGCTCACATTTATCCTGCATTTATTT 59.292 33.333 0.00 0.00 0.00 1.40
156 157 7.922278 TGCTCACATTTATCCTGCATTTATTTC 59.078 33.333 0.00 0.00 0.00 2.17
157 158 7.922278 GCTCACATTTATCCTGCATTTATTTCA 59.078 33.333 0.00 0.00 0.00 2.69
158 159 9.459640 CTCACATTTATCCTGCATTTATTTCAG 57.540 33.333 0.00 0.00 0.00 3.02
159 160 8.415553 TCACATTTATCCTGCATTTATTTCAGG 58.584 33.333 1.29 1.29 46.60 3.86
168 169 5.663456 TGCATTTATTTCAGGATTTCCAGC 58.337 37.500 0.00 0.00 38.89 4.85
169 170 4.741676 GCATTTATTTCAGGATTTCCAGCG 59.258 41.667 0.00 0.00 38.89 5.18
170 171 5.450412 GCATTTATTTCAGGATTTCCAGCGA 60.450 40.000 0.00 0.00 38.89 4.93
171 172 6.736794 GCATTTATTTCAGGATTTCCAGCGAT 60.737 38.462 0.00 0.00 38.89 4.58
172 173 7.522073 GCATTTATTTCAGGATTTCCAGCGATA 60.522 37.037 0.00 0.00 38.89 2.92
173 174 6.861065 TTATTTCAGGATTTCCAGCGATAC 57.139 37.500 0.00 0.00 38.89 2.24
174 175 3.904800 TTCAGGATTTCCAGCGATACA 57.095 42.857 0.00 0.00 38.89 2.29
175 176 3.179443 TCAGGATTTCCAGCGATACAC 57.821 47.619 0.00 0.00 38.89 2.90
176 177 1.860950 CAGGATTTCCAGCGATACACG 59.139 52.381 0.00 0.00 41.10 4.49
177 178 1.480954 AGGATTTCCAGCGATACACGT 59.519 47.619 0.00 0.00 40.59 4.49
178 179 2.093658 AGGATTTCCAGCGATACACGTT 60.094 45.455 0.00 0.00 40.59 3.99
179 180 2.676342 GGATTTCCAGCGATACACGTTT 59.324 45.455 0.00 0.00 39.05 3.60
180 181 3.866910 GGATTTCCAGCGATACACGTTTA 59.133 43.478 0.00 0.00 39.05 2.01
181 182 4.025979 GGATTTCCAGCGATACACGTTTAG 60.026 45.833 0.00 0.00 39.05 1.85
182 183 3.581024 TTCCAGCGATACACGTTTAGT 57.419 42.857 0.00 0.00 44.60 2.24
183 184 8.349620 GGATTTCCAGCGATACACGTTTAGTG 62.350 46.154 0.00 0.00 45.44 2.74
193 194 2.805845 CACGTTTAGTGGGAGGATACG 58.194 52.381 0.00 0.00 46.77 3.06
194 195 2.165030 CACGTTTAGTGGGAGGATACGT 59.835 50.000 0.00 0.00 46.77 3.57
195 196 2.827921 ACGTTTAGTGGGAGGATACGTT 59.172 45.455 0.00 0.00 46.39 3.99
196 197 3.119352 ACGTTTAGTGGGAGGATACGTTC 60.119 47.826 0.00 0.00 46.39 3.95
197 198 3.736126 CGTTTAGTGGGAGGATACGTTCC 60.736 52.174 0.00 0.26 45.85 3.62
200 201 3.945647 GGGAGGATACGTTCCCGT 58.054 61.111 7.28 0.00 46.81 5.28
201 202 1.738432 GGGAGGATACGTTCCCGTC 59.262 63.158 7.28 3.21 46.28 4.79
202 203 0.754587 GGGAGGATACGTTCCCGTCT 60.755 60.000 7.28 0.00 46.28 4.18
203 204 0.384669 GGAGGATACGTTCCCGTCTG 59.615 60.000 11.61 0.00 46.28 3.51
204 205 1.386533 GAGGATACGTTCCCGTCTGA 58.613 55.000 11.61 0.00 46.28 3.27
205 206 1.065251 GAGGATACGTTCCCGTCTGAC 59.935 57.143 11.61 0.00 46.28 3.51
206 207 1.101331 GGATACGTTCCCGTCTGACT 58.899 55.000 6.21 0.00 46.28 3.41
207 208 2.092753 AGGATACGTTCCCGTCTGACTA 60.093 50.000 6.21 0.00 46.28 2.59
208 209 2.032675 GGATACGTTCCCGTCTGACTAC 59.967 54.545 6.21 0.00 46.28 2.73
209 210 1.078709 TACGTTCCCGTCTGACTACG 58.921 55.000 6.21 11.81 46.28 3.51
210 211 0.603707 ACGTTCCCGTCTGACTACGA 60.604 55.000 20.22 6.48 46.28 3.43
211 212 0.096628 CGTTCCCGTCTGACTACGAG 59.903 60.000 6.21 0.00 45.68 4.18
212 213 0.450983 GTTCCCGTCTGACTACGAGG 59.549 60.000 6.21 0.00 45.68 4.63
213 214 0.037303 TTCCCGTCTGACTACGAGGT 59.963 55.000 6.21 0.00 45.68 3.85
214 215 0.675837 TCCCGTCTGACTACGAGGTG 60.676 60.000 6.21 0.00 45.68 4.00
215 216 0.675837 CCCGTCTGACTACGAGGTGA 60.676 60.000 6.21 0.00 45.68 4.02
216 217 1.162698 CCGTCTGACTACGAGGTGAA 58.837 55.000 6.21 0.00 45.68 3.18
217 218 1.538512 CCGTCTGACTACGAGGTGAAA 59.461 52.381 6.21 0.00 45.68 2.69
218 219 2.030540 CCGTCTGACTACGAGGTGAAAA 60.031 50.000 6.21 0.00 45.68 2.29
219 220 3.367087 CCGTCTGACTACGAGGTGAAAAT 60.367 47.826 6.21 0.00 45.68 1.82
220 221 3.852536 CGTCTGACTACGAGGTGAAAATC 59.147 47.826 6.21 0.00 45.68 2.17
221 222 4.379603 CGTCTGACTACGAGGTGAAAATCT 60.380 45.833 6.21 0.00 45.68 2.40
222 223 5.471257 GTCTGACTACGAGGTGAAAATCTT 58.529 41.667 0.00 0.00 0.00 2.40
223 224 6.618811 GTCTGACTACGAGGTGAAAATCTTA 58.381 40.000 0.00 0.00 0.00 2.10
224 225 7.088905 GTCTGACTACGAGGTGAAAATCTTAA 58.911 38.462 0.00 0.00 0.00 1.85
225 226 7.273815 GTCTGACTACGAGGTGAAAATCTTAAG 59.726 40.741 0.00 0.00 0.00 1.85
226 227 7.176165 TCTGACTACGAGGTGAAAATCTTAAGA 59.824 37.037 7.82 7.82 0.00 2.10
227 228 7.837863 TGACTACGAGGTGAAAATCTTAAGAT 58.162 34.615 12.37 12.37 36.07 2.40
228 229 7.759886 TGACTACGAGGTGAAAATCTTAAGATG 59.240 37.037 18.61 5.55 34.49 2.90
229 230 7.042335 ACTACGAGGTGAAAATCTTAAGATGG 58.958 38.462 18.61 0.00 34.49 3.51
230 231 5.805728 ACGAGGTGAAAATCTTAAGATGGT 58.194 37.500 18.61 9.54 34.49 3.55
231 232 5.643777 ACGAGGTGAAAATCTTAAGATGGTG 59.356 40.000 18.61 4.68 34.49 4.17
232 233 5.643777 CGAGGTGAAAATCTTAAGATGGTGT 59.356 40.000 18.61 0.00 34.49 4.16
233 234 6.402550 CGAGGTGAAAATCTTAAGATGGTGTG 60.403 42.308 18.61 0.37 34.49 3.82
234 235 6.306987 AGGTGAAAATCTTAAGATGGTGTGT 58.693 36.000 18.61 0.00 34.49 3.72
235 236 6.431234 AGGTGAAAATCTTAAGATGGTGTGTC 59.569 38.462 18.61 8.20 34.49 3.67
236 237 6.307155 GTGAAAATCTTAAGATGGTGTGTCG 58.693 40.000 18.61 0.00 34.49 4.35
237 238 5.411361 TGAAAATCTTAAGATGGTGTGTCGG 59.589 40.000 18.61 0.00 34.49 4.79
238 239 2.380084 TCTTAAGATGGTGTGTCGGC 57.620 50.000 0.00 0.00 0.00 5.54
239 240 1.899814 TCTTAAGATGGTGTGTCGGCT 59.100 47.619 0.00 0.00 0.00 5.52
240 241 2.094182 TCTTAAGATGGTGTGTCGGCTC 60.094 50.000 0.00 0.00 0.00 4.70
241 242 1.262417 TAAGATGGTGTGTCGGCTCA 58.738 50.000 0.00 0.00 0.00 4.26
242 243 0.396435 AAGATGGTGTGTCGGCTCAA 59.604 50.000 0.00 0.00 0.00 3.02
243 244 0.615331 AGATGGTGTGTCGGCTCAAT 59.385 50.000 0.00 0.00 0.00 2.57
244 245 1.009829 GATGGTGTGTCGGCTCAATC 58.990 55.000 0.00 0.00 0.00 2.67
245 246 0.615331 ATGGTGTGTCGGCTCAATCT 59.385 50.000 0.00 0.00 0.00 2.40
246 247 0.037326 TGGTGTGTCGGCTCAATCTC 60.037 55.000 0.00 0.00 0.00 2.75
247 248 0.247736 GGTGTGTCGGCTCAATCTCT 59.752 55.000 0.00 0.00 0.00 3.10
248 249 1.634702 GTGTGTCGGCTCAATCTCTC 58.365 55.000 0.00 0.00 0.00 3.20
249 250 1.067565 GTGTGTCGGCTCAATCTCTCA 60.068 52.381 0.00 0.00 0.00 3.27
250 251 1.203287 TGTGTCGGCTCAATCTCTCAG 59.797 52.381 0.00 0.00 0.00 3.35
251 252 1.474478 GTGTCGGCTCAATCTCTCAGA 59.526 52.381 0.00 0.00 0.00 3.27
252 253 1.747924 TGTCGGCTCAATCTCTCAGAG 59.252 52.381 0.00 0.00 0.00 3.35
253 254 1.066908 GTCGGCTCAATCTCTCAGAGG 59.933 57.143 0.57 0.00 0.00 3.69
254 255 1.110442 CGGCTCAATCTCTCAGAGGT 58.890 55.000 0.57 0.00 0.00 3.85
255 256 1.202394 CGGCTCAATCTCTCAGAGGTG 60.202 57.143 0.57 0.76 0.00 4.00
256 257 1.473080 GGCTCAATCTCTCAGAGGTGC 60.473 57.143 0.57 0.00 0.00 5.01
257 258 1.481772 GCTCAATCTCTCAGAGGTGCT 59.518 52.381 0.57 0.00 0.00 4.40
258 259 2.481795 GCTCAATCTCTCAGAGGTGCTC 60.482 54.545 0.57 0.00 0.00 4.26
259 260 1.747924 TCAATCTCTCAGAGGTGCTCG 59.252 52.381 0.57 0.00 35.36 5.03
260 261 1.476085 CAATCTCTCAGAGGTGCTCGT 59.524 52.381 0.57 0.00 35.36 4.18
261 262 2.685388 CAATCTCTCAGAGGTGCTCGTA 59.315 50.000 0.57 0.00 35.36 3.43
262 263 2.491675 TCTCTCAGAGGTGCTCGTAA 57.508 50.000 0.57 0.00 35.36 3.18
263 264 2.360844 TCTCTCAGAGGTGCTCGTAAG 58.639 52.381 0.57 0.00 35.36 2.34
264 265 1.403679 CTCTCAGAGGTGCTCGTAAGG 59.596 57.143 0.00 0.00 35.36 2.69
265 266 0.457851 CTCAGAGGTGCTCGTAAGGG 59.542 60.000 0.00 0.00 44.72 3.95
266 267 0.251653 TCAGAGGTGCTCGTAAGGGT 60.252 55.000 0.00 0.00 42.80 4.34
267 268 1.005097 TCAGAGGTGCTCGTAAGGGTA 59.995 52.381 0.00 0.00 42.80 3.69
268 269 1.405821 CAGAGGTGCTCGTAAGGGTAG 59.594 57.143 0.00 0.00 42.80 3.18
269 270 1.005687 AGAGGTGCTCGTAAGGGTAGT 59.994 52.381 0.00 0.00 42.80 2.73
270 271 1.134560 GAGGTGCTCGTAAGGGTAGTG 59.865 57.143 0.00 0.00 42.80 2.74
271 272 1.180029 GGTGCTCGTAAGGGTAGTGA 58.820 55.000 0.00 0.00 42.80 3.41
272 273 1.134560 GGTGCTCGTAAGGGTAGTGAG 59.865 57.143 0.00 0.00 42.80 3.51
273 274 1.817447 GTGCTCGTAAGGGTAGTGAGT 59.183 52.381 0.00 0.00 42.80 3.41
274 275 1.816835 TGCTCGTAAGGGTAGTGAGTG 59.183 52.381 0.00 0.00 42.80 3.51
275 276 1.817447 GCTCGTAAGGGTAGTGAGTGT 59.183 52.381 0.00 0.00 42.80 3.55
276 277 2.415625 GCTCGTAAGGGTAGTGAGTGTG 60.416 54.545 0.00 0.00 42.80 3.82
277 278 1.542915 TCGTAAGGGTAGTGAGTGTGC 59.457 52.381 0.00 0.00 38.47 4.57
278 279 1.403780 CGTAAGGGTAGTGAGTGTGCC 60.404 57.143 0.00 0.00 0.00 5.01
279 280 1.900486 GTAAGGGTAGTGAGTGTGCCT 59.100 52.381 0.00 0.00 0.00 4.75
280 281 1.435256 AAGGGTAGTGAGTGTGCCTT 58.565 50.000 0.00 0.00 0.00 4.35
281 282 0.977395 AGGGTAGTGAGTGTGCCTTC 59.023 55.000 0.00 0.00 0.00 3.46
282 283 0.685097 GGGTAGTGAGTGTGCCTTCA 59.315 55.000 0.00 0.00 0.00 3.02
283 284 1.279271 GGGTAGTGAGTGTGCCTTCAT 59.721 52.381 0.00 0.00 0.00 2.57
284 285 2.500098 GGGTAGTGAGTGTGCCTTCATA 59.500 50.000 0.00 0.00 0.00 2.15
285 286 3.430929 GGGTAGTGAGTGTGCCTTCATAG 60.431 52.174 0.00 0.00 0.00 2.23
286 287 3.447586 GGTAGTGAGTGTGCCTTCATAGA 59.552 47.826 0.00 0.00 0.00 1.98
287 288 4.100189 GGTAGTGAGTGTGCCTTCATAGAT 59.900 45.833 0.00 0.00 0.00 1.98
288 289 4.134379 AGTGAGTGTGCCTTCATAGATG 57.866 45.455 0.00 0.00 0.00 2.90
289 290 3.517100 AGTGAGTGTGCCTTCATAGATGT 59.483 43.478 0.00 0.00 0.00 3.06
290 291 3.620374 GTGAGTGTGCCTTCATAGATGTG 59.380 47.826 0.00 0.00 0.00 3.21
291 292 3.515104 TGAGTGTGCCTTCATAGATGTGA 59.485 43.478 0.00 0.00 0.00 3.58
292 293 4.118410 GAGTGTGCCTTCATAGATGTGAG 58.882 47.826 0.00 0.00 0.00 3.51
293 294 3.517100 AGTGTGCCTTCATAGATGTGAGT 59.483 43.478 0.00 0.00 0.00 3.41
294 295 3.620374 GTGTGCCTTCATAGATGTGAGTG 59.380 47.826 0.00 0.00 0.00 3.51
295 296 3.261643 TGTGCCTTCATAGATGTGAGTGT 59.738 43.478 0.00 0.00 0.00 3.55
296 297 4.466015 TGTGCCTTCATAGATGTGAGTGTA 59.534 41.667 0.00 0.00 0.00 2.90
297 298 5.129320 TGTGCCTTCATAGATGTGAGTGTAT 59.871 40.000 0.00 0.00 0.00 2.29
298 299 5.464722 GTGCCTTCATAGATGTGAGTGTATG 59.535 44.000 0.00 0.00 0.00 2.39
299 300 4.450419 GCCTTCATAGATGTGAGTGTATGC 59.550 45.833 0.00 0.00 0.00 3.14
300 301 4.683320 CCTTCATAGATGTGAGTGTATGCG 59.317 45.833 0.00 0.00 0.00 4.73
301 302 4.918810 TCATAGATGTGAGTGTATGCGT 57.081 40.909 0.00 0.00 0.00 5.24
302 303 4.610945 TCATAGATGTGAGTGTATGCGTG 58.389 43.478 0.00 0.00 0.00 5.34
303 304 4.097892 TCATAGATGTGAGTGTATGCGTGT 59.902 41.667 0.00 0.00 0.00 4.49
304 305 5.298276 TCATAGATGTGAGTGTATGCGTGTA 59.702 40.000 0.00 0.00 0.00 2.90
305 306 4.655762 AGATGTGAGTGTATGCGTGTAT 57.344 40.909 0.00 0.00 0.00 2.29
306 307 5.767816 AGATGTGAGTGTATGCGTGTATA 57.232 39.130 0.00 0.00 0.00 1.47
307 308 6.332735 AGATGTGAGTGTATGCGTGTATAT 57.667 37.500 0.00 0.00 0.00 0.86
308 309 7.448748 AGATGTGAGTGTATGCGTGTATATA 57.551 36.000 0.00 0.00 0.00 0.86
309 310 8.056407 AGATGTGAGTGTATGCGTGTATATAT 57.944 34.615 0.00 0.00 0.00 0.86
310 311 7.970614 AGATGTGAGTGTATGCGTGTATATATG 59.029 37.037 0.00 0.00 0.00 1.78
311 312 7.209471 TGTGAGTGTATGCGTGTATATATGA 57.791 36.000 0.00 0.00 0.00 2.15
312 313 7.305474 TGTGAGTGTATGCGTGTATATATGAG 58.695 38.462 0.00 0.00 0.00 2.90
313 314 6.251589 GTGAGTGTATGCGTGTATATATGAGC 59.748 42.308 0.00 0.00 0.00 4.26
314 315 6.151144 TGAGTGTATGCGTGTATATATGAGCT 59.849 38.462 0.00 0.00 0.00 4.09
315 316 6.925211 AGTGTATGCGTGTATATATGAGCTT 58.075 36.000 0.00 0.00 0.00 3.74
316 317 6.808704 AGTGTATGCGTGTATATATGAGCTTG 59.191 38.462 0.00 0.00 0.00 4.01
317 318 6.586463 GTGTATGCGTGTATATATGAGCTTGT 59.414 38.462 0.00 0.00 0.00 3.16
318 319 6.586082 TGTATGCGTGTATATATGAGCTTGTG 59.414 38.462 0.00 0.00 0.00 3.33
319 320 4.944048 TGCGTGTATATATGAGCTTGTGT 58.056 39.130 0.00 0.00 0.00 3.72
320 321 5.356426 TGCGTGTATATATGAGCTTGTGTT 58.644 37.500 0.00 0.00 0.00 3.32
321 322 5.815222 TGCGTGTATATATGAGCTTGTGTTT 59.185 36.000 0.00 0.00 0.00 2.83
322 323 6.019075 TGCGTGTATATATGAGCTTGTGTTTC 60.019 38.462 0.00 0.00 0.00 2.78
323 324 6.201044 GCGTGTATATATGAGCTTGTGTTTCT 59.799 38.462 0.00 0.00 0.00 2.52
324 325 7.558991 CGTGTATATATGAGCTTGTGTTTCTG 58.441 38.462 0.00 0.00 0.00 3.02
325 326 7.222805 CGTGTATATATGAGCTTGTGTTTCTGT 59.777 37.037 0.00 0.00 0.00 3.41
326 327 9.529325 GTGTATATATGAGCTTGTGTTTCTGTA 57.471 33.333 0.00 0.00 0.00 2.74
327 328 9.529325 TGTATATATGAGCTTGTGTTTCTGTAC 57.471 33.333 0.00 0.00 0.00 2.90
328 329 9.751542 GTATATATGAGCTTGTGTTTCTGTACT 57.248 33.333 0.00 0.00 0.00 2.73
329 330 6.974932 ATATGAGCTTGTGTTTCTGTACTG 57.025 37.500 0.00 0.00 0.00 2.74
330 331 4.400529 TGAGCTTGTGTTTCTGTACTGA 57.599 40.909 0.00 0.00 0.00 3.41
331 332 4.960938 TGAGCTTGTGTTTCTGTACTGAT 58.039 39.130 3.03 0.00 0.00 2.90
332 333 4.751600 TGAGCTTGTGTTTCTGTACTGATG 59.248 41.667 3.03 0.00 0.00 3.07
333 334 4.708177 AGCTTGTGTTTCTGTACTGATGT 58.292 39.130 3.03 0.00 0.00 3.06
334 335 5.126067 AGCTTGTGTTTCTGTACTGATGTT 58.874 37.500 3.03 0.00 0.00 2.71
335 336 5.590259 AGCTTGTGTTTCTGTACTGATGTTT 59.410 36.000 3.03 0.00 0.00 2.83
336 337 6.765989 AGCTTGTGTTTCTGTACTGATGTTTA 59.234 34.615 3.03 0.00 0.00 2.01
337 338 7.282224 AGCTTGTGTTTCTGTACTGATGTTTAA 59.718 33.333 3.03 0.00 0.00 1.52
338 339 7.913297 GCTTGTGTTTCTGTACTGATGTTTAAA 59.087 33.333 3.03 0.00 0.00 1.52
339 340 9.781834 CTTGTGTTTCTGTACTGATGTTTAAAA 57.218 29.630 3.03 0.00 0.00 1.52
407 408 0.685097 ACACAGGTGCGTACAGGAAT 59.315 50.000 5.86 0.00 0.00 3.01
579 580 0.036010 AACTCCGGGCTCACTCAATG 60.036 55.000 0.00 0.00 0.00 2.82
593 594 1.270550 CTCAATGCGGAAAAGGCAGTT 59.729 47.619 0.00 0.00 44.71 3.16
687 688 2.481449 CCCTCCCATTCGTTTCTCTACG 60.481 54.545 0.00 0.00 42.68 3.51
722 723 4.883300 CGTACGTCGCCGCCTCTC 62.883 72.222 7.22 0.00 37.70 3.20
762 773 4.954970 CAACCGCCACTGCCACCT 62.955 66.667 0.00 0.00 0.00 4.00
763 774 4.643387 AACCGCCACTGCCACCTC 62.643 66.667 0.00 0.00 0.00 3.85
768 779 4.767255 CCACTGCCACCTCGAGCC 62.767 72.222 6.99 0.00 0.00 4.70
769 780 4.007644 CACTGCCACCTCGAGCCA 62.008 66.667 6.99 0.10 0.00 4.75
842 854 0.749649 CTTCCTCACTCCCCATCTCG 59.250 60.000 0.00 0.00 0.00 4.04
896 908 4.361253 AGTGCGCCACTGTTACAG 57.639 55.556 11.21 11.21 43.63 2.74
897 909 1.961277 AGTGCGCCACTGTTACAGC 60.961 57.895 12.80 0.00 43.63 4.40
898 910 1.961277 GTGCGCCACTGTTACAGCT 60.961 57.895 12.80 0.00 34.37 4.24
937 949 0.249447 GCCCTGCTTGTTTGGTTCAC 60.249 55.000 0.00 0.00 0.00 3.18
1081 1093 3.077556 GGGAGAGCTTCTCGGGCA 61.078 66.667 0.00 0.00 44.28 5.36
1230 1242 2.808321 GTCCGGTTCTTCGCGTCC 60.808 66.667 5.77 1.58 0.00 4.79
1537 1549 4.309950 GCGACCAGGTGTTCCGGT 62.310 66.667 0.00 0.00 41.00 5.28
1752 1764 1.043673 GCGACTCCCTCCAGGTACAT 61.044 60.000 0.00 0.00 36.75 2.29
1753 1765 1.486211 CGACTCCCTCCAGGTACATT 58.514 55.000 0.00 0.00 36.75 2.71
1759 1771 3.455910 CTCCCTCCAGGTACATTCATTCA 59.544 47.826 0.00 0.00 36.75 2.57
1763 1775 5.439721 CCTCCAGGTACATTCATTCATTCA 58.560 41.667 0.00 0.00 0.00 2.57
1764 1776 6.066690 CCTCCAGGTACATTCATTCATTCAT 58.933 40.000 0.00 0.00 0.00 2.57
1774 1786 3.710724 TCATTCATTCATTCAGGCCCAA 58.289 40.909 0.00 0.00 0.00 4.12
1776 1788 2.905415 TCATTCATTCAGGCCCAACT 57.095 45.000 0.00 0.00 0.00 3.16
1787 1803 2.034066 CCCAACTCATGCACCGGT 59.966 61.111 0.00 0.00 0.00 5.28
1872 1888 0.670546 CGGTGCAGGTTCTGACGAAT 60.671 55.000 0.00 0.00 32.44 3.34
2034 2059 0.991920 GGGAGTTCACATGGGGAGAA 59.008 55.000 0.00 0.00 0.00 2.87
2099 2124 3.382832 CCCCTTCGAGACGCCACT 61.383 66.667 0.00 0.00 0.00 4.00
2108 2133 2.742372 GACGCCACTTGTCGCCAT 60.742 61.111 0.00 0.00 0.00 4.40
2110 2135 3.803082 CGCCACTTGTCGCCATGG 61.803 66.667 7.63 7.63 35.17 3.66
2139 2164 3.000819 CACCACCGGTCCTAGCCA 61.001 66.667 2.59 0.00 31.02 4.75
2140 2165 2.203877 ACCACCGGTCCTAGCCAA 60.204 61.111 2.59 0.00 0.00 4.52
2141 2166 2.291043 ACCACCGGTCCTAGCCAAG 61.291 63.158 2.59 0.00 0.00 3.61
2165 2198 1.228533 TACATCGCCGCGACATACTA 58.771 50.000 19.45 0.30 39.18 1.82
2276 2309 0.179000 GGTGACCTGGCTGGATGTAG 59.821 60.000 18.12 0.00 39.71 2.74
2292 2325 4.455190 GGATGTAGAGCTACGTACCTAAGG 59.545 50.000 2.54 0.00 38.85 2.69
2466 6856 2.490993 CTTGCATTGGCCGGTTCACC 62.491 60.000 1.90 0.00 40.13 4.02
2485 6875 1.866925 GGCCGCTAACAGTTGACAC 59.133 57.895 0.00 0.00 0.00 3.67
2500 6890 0.316689 GACACGCGGTGAAAGTTTGG 60.317 55.000 12.47 0.00 36.96 3.28
2502 6892 0.938713 CACGCGGTGAAAGTTTGGTA 59.061 50.000 12.47 0.00 35.23 3.25
2613 8085 2.001159 CTGTGCTCTGCTTCATGTCTC 58.999 52.381 0.00 0.00 0.00 3.36
2667 8139 1.375523 GTTCGTCCGTGATTGGGCT 60.376 57.895 0.00 0.00 0.00 5.19
2668 8140 1.375396 TTCGTCCGTGATTGGGCTG 60.375 57.895 0.00 0.00 0.00 4.85
2669 8141 2.796483 TTCGTCCGTGATTGGGCTGG 62.796 60.000 0.00 0.00 0.00 4.85
2709 8181 6.764560 TCCTTCTTTTGTAGTAACACTGTTCC 59.235 38.462 0.00 0.00 34.61 3.62
2719 8191 4.748600 AGTAACACTGTTCCGCTTTAACTC 59.251 41.667 0.00 0.00 0.00 3.01
2725 8197 1.062148 GTTCCGCTTTAACTCGCATCC 59.938 52.381 0.00 0.00 0.00 3.51
2729 8201 1.190323 CGCTTTAACTCGCATCCGATC 59.810 52.381 0.00 0.00 43.47 3.69
2730 8202 2.474816 GCTTTAACTCGCATCCGATCT 58.525 47.619 0.00 0.00 43.47 2.75
2731 8203 2.219674 GCTTTAACTCGCATCCGATCTG 59.780 50.000 0.00 0.00 43.47 2.90
2732 8204 3.706698 CTTTAACTCGCATCCGATCTGA 58.293 45.455 0.00 0.00 43.47 3.27
2733 8205 4.302455 CTTTAACTCGCATCCGATCTGAT 58.698 43.478 0.00 0.00 43.47 2.90
2745 8220 4.058124 TCCGATCTGATATTTGCCTTTCG 58.942 43.478 0.00 0.00 0.00 3.46
2811 8292 5.627499 TTGTGATGGCACTATTGTTCTTC 57.373 39.130 0.00 0.00 45.36 2.87
2814 8295 1.448985 TGGCACTATTGTTCTTCCGC 58.551 50.000 0.00 0.00 0.00 5.54
2816 8297 1.810151 GGCACTATTGTTCTTCCGCAA 59.190 47.619 0.00 0.00 0.00 4.85
2817 8298 2.414161 GGCACTATTGTTCTTCCGCAAC 60.414 50.000 0.00 0.00 0.00 4.17
2854 8335 5.232202 CGGCAGTATGTATCGCCTATAAATG 59.768 44.000 0.00 0.00 42.59 2.32
2864 8345 4.765273 TCGCCTATAAATGCTTGAAGTCA 58.235 39.130 0.00 0.00 0.00 3.41
2870 8351 9.237846 GCCTATAAATGCTTGAAGTCATTTTAC 57.762 33.333 22.68 11.25 41.50 2.01
2877 8358 7.444558 TGCTTGAAGTCATTTTACGAAAAAC 57.555 32.000 0.00 0.00 37.41 2.43
2882 8363 9.445786 TTGAAGTCATTTTACGAAAAACATCTC 57.554 29.630 0.00 0.00 37.41 2.75
2905 8387 8.701895 TCTCCTATAAATACTTGTGAAATCGGT 58.298 33.333 0.00 0.00 0.00 4.69
2907 8389 9.754382 TCCTATAAATACTTGTGAAATCGGTAC 57.246 33.333 0.00 0.00 0.00 3.34
2908 8390 9.760077 CCTATAAATACTTGTGAAATCGGTACT 57.240 33.333 0.00 0.00 0.00 2.73
2922 8404 9.275398 TGAAATCGGTACTTAACTTGTATGTTT 57.725 29.630 0.00 0.00 0.00 2.83
2948 8430 1.443828 TTTTTGCGGGGGAACTTGC 59.556 52.632 0.00 0.00 0.00 4.01
2949 8431 1.330655 TTTTTGCGGGGGAACTTGCA 61.331 50.000 0.00 0.00 38.35 4.08
2950 8432 1.118356 TTTTGCGGGGGAACTTGCAT 61.118 50.000 0.00 0.00 39.47 3.96
2951 8433 1.814772 TTTGCGGGGGAACTTGCATG 61.815 55.000 0.00 0.00 39.47 4.06
2952 8434 4.133796 GCGGGGGAACTTGCATGC 62.134 66.667 11.82 11.82 0.00 4.06
2953 8435 2.361610 CGGGGGAACTTGCATGCT 60.362 61.111 20.33 0.00 0.00 3.79
2954 8436 1.978617 CGGGGGAACTTGCATGCTT 60.979 57.895 20.33 4.59 0.00 3.91
2955 8437 1.893062 GGGGGAACTTGCATGCTTC 59.107 57.895 20.33 14.02 0.00 3.86
2956 8438 1.607801 GGGGGAACTTGCATGCTTCC 61.608 60.000 22.78 22.78 33.85 3.46
2957 8439 0.613012 GGGGAACTTGCATGCTTCCT 60.613 55.000 27.11 9.31 34.86 3.36
2958 8440 1.260544 GGGAACTTGCATGCTTCCTT 58.739 50.000 27.11 12.03 34.86 3.36
2959 8441 1.067354 GGGAACTTGCATGCTTCCTTG 60.067 52.381 27.11 11.87 34.86 3.61
2960 8442 1.888512 GGAACTTGCATGCTTCCTTGA 59.111 47.619 23.31 0.00 32.16 3.02
2961 8443 2.352127 GGAACTTGCATGCTTCCTTGAC 60.352 50.000 23.31 7.67 32.16 3.18
2962 8444 2.283145 ACTTGCATGCTTCCTTGACT 57.717 45.000 20.33 0.00 0.00 3.41
2963 8445 2.157738 ACTTGCATGCTTCCTTGACTC 58.842 47.619 20.33 0.00 0.00 3.36
2964 8446 1.129998 CTTGCATGCTTCCTTGACTCG 59.870 52.381 20.33 0.00 0.00 4.18
2965 8447 0.035317 TGCATGCTTCCTTGACTCGT 59.965 50.000 20.33 0.00 0.00 4.18
2966 8448 1.275010 TGCATGCTTCCTTGACTCGTA 59.725 47.619 20.33 0.00 0.00 3.43
2967 8449 2.289382 TGCATGCTTCCTTGACTCGTAA 60.289 45.455 20.33 0.00 0.00 3.18
2968 8450 2.939103 GCATGCTTCCTTGACTCGTAAT 59.061 45.455 11.37 0.00 0.00 1.89
2969 8451 3.001736 GCATGCTTCCTTGACTCGTAATC 59.998 47.826 11.37 0.00 0.00 1.75
2970 8452 4.437239 CATGCTTCCTTGACTCGTAATCT 58.563 43.478 0.00 0.00 0.00 2.40
2971 8453 4.111375 TGCTTCCTTGACTCGTAATCTC 57.889 45.455 0.00 0.00 0.00 2.75
2972 8454 3.509967 TGCTTCCTTGACTCGTAATCTCA 59.490 43.478 0.00 0.00 0.00 3.27
2973 8455 3.860536 GCTTCCTTGACTCGTAATCTCAC 59.139 47.826 0.00 0.00 0.00 3.51
2974 8456 4.618460 GCTTCCTTGACTCGTAATCTCACA 60.618 45.833 0.00 0.00 0.00 3.58
2975 8457 5.655488 CTTCCTTGACTCGTAATCTCACAT 58.345 41.667 0.00 0.00 0.00 3.21
2976 8458 5.661056 TCCTTGACTCGTAATCTCACATT 57.339 39.130 0.00 0.00 0.00 2.71
2977 8459 6.769134 TCCTTGACTCGTAATCTCACATTA 57.231 37.500 0.00 0.00 0.00 1.90
2978 8460 7.165460 TCCTTGACTCGTAATCTCACATTAA 57.835 36.000 0.00 0.00 0.00 1.40
2979 8461 7.033791 TCCTTGACTCGTAATCTCACATTAAC 58.966 38.462 0.00 0.00 0.00 2.01
2980 8462 6.811665 CCTTGACTCGTAATCTCACATTAACA 59.188 38.462 0.00 0.00 0.00 2.41
2981 8463 7.330946 CCTTGACTCGTAATCTCACATTAACAA 59.669 37.037 0.00 0.00 0.00 2.83
2982 8464 8.596271 TTGACTCGTAATCTCACATTAACAAA 57.404 30.769 0.00 0.00 0.00 2.83
2983 8465 8.014322 TGACTCGTAATCTCACATTAACAAAC 57.986 34.615 0.00 0.00 0.00 2.93
2984 8466 7.654116 TGACTCGTAATCTCACATTAACAAACA 59.346 33.333 0.00 0.00 0.00 2.83
2985 8467 8.373048 ACTCGTAATCTCACATTAACAAACAA 57.627 30.769 0.00 0.00 0.00 2.83
2986 8468 8.832521 ACTCGTAATCTCACATTAACAAACAAA 58.167 29.630 0.00 0.00 0.00 2.83
2987 8469 9.658475 CTCGTAATCTCACATTAACAAACAAAA 57.342 29.630 0.00 0.00 0.00 2.44
2988 8470 9.440784 TCGTAATCTCACATTAACAAACAAAAC 57.559 29.630 0.00 0.00 0.00 2.43
2989 8471 9.445786 CGTAATCTCACATTAACAAACAAAACT 57.554 29.630 0.00 0.00 0.00 2.66
3005 8487 5.213891 CAAAACTATTTTTGGTCTGGCCT 57.786 39.130 3.32 0.00 45.42 5.19
3006 8488 5.610398 CAAAACTATTTTTGGTCTGGCCTT 58.390 37.500 3.32 0.00 45.42 4.35
3007 8489 5.887214 AAACTATTTTTGGTCTGGCCTTT 57.113 34.783 3.32 0.00 38.35 3.11
3008 8490 4.871933 ACTATTTTTGGTCTGGCCTTTG 57.128 40.909 3.32 0.00 38.35 2.77
3009 8491 2.549064 ATTTTTGGTCTGGCCTTTGC 57.451 45.000 3.32 0.00 38.35 3.68
3010 8492 0.103937 TTTTTGGTCTGGCCTTTGCG 59.896 50.000 3.32 0.00 38.85 4.85
3011 8493 1.040339 TTTTGGTCTGGCCTTTGCGT 61.040 50.000 3.32 0.00 38.85 5.24
3012 8494 0.179015 TTTGGTCTGGCCTTTGCGTA 60.179 50.000 3.32 0.00 38.85 4.42
3013 8495 0.605319 TTGGTCTGGCCTTTGCGTAG 60.605 55.000 3.32 0.00 38.85 3.51
3014 8496 1.003718 GGTCTGGCCTTTGCGTAGT 60.004 57.895 3.32 0.00 38.85 2.73
3015 8497 0.605589 GGTCTGGCCTTTGCGTAGTT 60.606 55.000 3.32 0.00 38.85 2.24
3016 8498 1.338389 GGTCTGGCCTTTGCGTAGTTA 60.338 52.381 3.32 0.00 38.85 2.24
3017 8499 2.419667 GTCTGGCCTTTGCGTAGTTAA 58.580 47.619 3.32 0.00 38.85 2.01
3018 8500 2.415512 GTCTGGCCTTTGCGTAGTTAAG 59.584 50.000 3.32 0.00 38.85 1.85
3019 8501 1.737793 CTGGCCTTTGCGTAGTTAAGG 59.262 52.381 3.32 0.00 41.08 2.69
3020 8502 1.072648 TGGCCTTTGCGTAGTTAAGGT 59.927 47.619 3.32 0.00 40.55 3.50
3021 8503 1.467342 GGCCTTTGCGTAGTTAAGGTG 59.533 52.381 0.00 0.00 40.55 4.00
3022 8504 1.135774 GCCTTTGCGTAGTTAAGGTGC 60.136 52.381 4.66 0.00 40.55 5.01
3023 8505 2.147958 CCTTTGCGTAGTTAAGGTGCA 58.852 47.619 0.00 0.00 36.14 4.57
3024 8506 2.095919 CCTTTGCGTAGTTAAGGTGCAC 60.096 50.000 8.80 8.80 36.14 4.57
3025 8507 2.242047 TTGCGTAGTTAAGGTGCACA 57.758 45.000 20.43 0.00 34.90 4.57
3026 8508 1.504359 TGCGTAGTTAAGGTGCACAC 58.496 50.000 20.43 8.13 0.00 3.82
3027 8509 1.202545 TGCGTAGTTAAGGTGCACACA 60.203 47.619 20.43 0.00 0.00 3.72
3028 8510 1.459592 GCGTAGTTAAGGTGCACACAG 59.540 52.381 20.43 5.19 0.00 3.66
3029 8511 1.459592 CGTAGTTAAGGTGCACACAGC 59.540 52.381 20.43 4.77 44.84 4.40
3030 8512 1.804748 GTAGTTAAGGTGCACACAGCC 59.195 52.381 20.43 0.00 45.66 4.85
3031 8513 0.884704 AGTTAAGGTGCACACAGCCG 60.885 55.000 20.43 0.00 45.66 5.52
3032 8514 1.147376 TTAAGGTGCACACAGCCGT 59.853 52.632 20.43 1.17 45.66 5.68
3033 8515 0.882927 TTAAGGTGCACACAGCCGTC 60.883 55.000 20.43 0.00 45.66 4.79
3034 8516 2.034048 TAAGGTGCACACAGCCGTCA 62.034 55.000 20.43 0.00 45.66 4.35
3035 8517 2.669569 GGTGCACACAGCCGTCAT 60.670 61.111 20.43 0.00 44.83 3.06
3036 8518 1.375396 GGTGCACACAGCCGTCATA 60.375 57.895 20.43 0.00 44.83 2.15
3037 8519 0.953471 GGTGCACACAGCCGTCATAA 60.953 55.000 20.43 0.00 44.83 1.90
3038 8520 0.871722 GTGCACACAGCCGTCATAAA 59.128 50.000 13.17 0.00 44.83 1.40
3039 8521 0.871722 TGCACACAGCCGTCATAAAC 59.128 50.000 0.00 0.00 44.83 2.01
3040 8522 0.871722 GCACACAGCCGTCATAAACA 59.128 50.000 0.00 0.00 37.23 2.83
3041 8523 1.468520 GCACACAGCCGTCATAAACAT 59.531 47.619 0.00 0.00 37.23 2.71
3042 8524 2.728846 GCACACAGCCGTCATAAACATG 60.729 50.000 0.00 0.00 37.23 3.21
3043 8525 2.483877 CACACAGCCGTCATAAACATGT 59.516 45.455 0.00 0.00 0.00 3.21
3044 8526 2.483877 ACACAGCCGTCATAAACATGTG 59.516 45.455 0.00 0.00 40.05 3.21
3045 8527 2.083774 ACAGCCGTCATAAACATGTGG 58.916 47.619 0.00 0.00 0.00 4.17
3046 8528 2.083774 CAGCCGTCATAAACATGTGGT 58.916 47.619 0.00 0.00 0.00 4.16
3047 8529 2.095853 CAGCCGTCATAAACATGTGGTC 59.904 50.000 0.00 0.00 0.00 4.02
3048 8530 2.027192 AGCCGTCATAAACATGTGGTCT 60.027 45.455 0.00 0.00 0.00 3.85
3049 8531 2.351726 GCCGTCATAAACATGTGGTCTC 59.648 50.000 0.00 0.00 0.00 3.36
3050 8532 3.595173 CCGTCATAAACATGTGGTCTCA 58.405 45.455 0.00 0.00 0.00 3.27
3051 8533 4.000325 CCGTCATAAACATGTGGTCTCAA 59.000 43.478 0.00 0.00 0.00 3.02
3052 8534 4.454161 CCGTCATAAACATGTGGTCTCAAA 59.546 41.667 0.00 0.00 0.00 2.69
3053 8535 5.049060 CCGTCATAAACATGTGGTCTCAAAA 60.049 40.000 0.00 0.00 0.00 2.44
3054 8536 6.434596 CGTCATAAACATGTGGTCTCAAAAA 58.565 36.000 0.00 0.00 0.00 1.94
3080 8562 2.579207 GCTACGTTGCCTGTCTATCA 57.421 50.000 11.09 0.00 0.00 2.15
3081 8563 3.099267 GCTACGTTGCCTGTCTATCAT 57.901 47.619 11.09 0.00 0.00 2.45
3082 8564 3.053455 GCTACGTTGCCTGTCTATCATC 58.947 50.000 11.09 0.00 0.00 2.92
3083 8565 2.209838 ACGTTGCCTGTCTATCATCG 57.790 50.000 0.00 0.00 0.00 3.84
3084 8566 0.855349 CGTTGCCTGTCTATCATCGC 59.145 55.000 0.00 0.00 0.00 4.58
3085 8567 1.536922 CGTTGCCTGTCTATCATCGCT 60.537 52.381 0.00 0.00 0.00 4.93
3086 8568 2.555199 GTTGCCTGTCTATCATCGCTT 58.445 47.619 0.00 0.00 0.00 4.68
3087 8569 2.939103 GTTGCCTGTCTATCATCGCTTT 59.061 45.455 0.00 0.00 0.00 3.51
3088 8570 3.266510 TGCCTGTCTATCATCGCTTTT 57.733 42.857 0.00 0.00 0.00 2.27
3089 8571 3.609853 TGCCTGTCTATCATCGCTTTTT 58.390 40.909 0.00 0.00 0.00 1.94
3090 8572 3.374988 TGCCTGTCTATCATCGCTTTTTG 59.625 43.478 0.00 0.00 0.00 2.44
3091 8573 3.623060 GCCTGTCTATCATCGCTTTTTGA 59.377 43.478 0.00 0.00 0.00 2.69
3092 8574 4.094887 GCCTGTCTATCATCGCTTTTTGAA 59.905 41.667 0.00 0.00 0.00 2.69
3093 8575 5.220931 GCCTGTCTATCATCGCTTTTTGAAT 60.221 40.000 0.00 0.00 0.00 2.57
3094 8576 6.197276 CCTGTCTATCATCGCTTTTTGAATG 58.803 40.000 0.00 0.00 0.00 2.67
3095 8577 5.572211 TGTCTATCATCGCTTTTTGAATGC 58.428 37.500 0.00 0.00 0.00 3.56
3096 8578 5.355071 TGTCTATCATCGCTTTTTGAATGCT 59.645 36.000 0.00 0.00 0.00 3.79
3097 8579 6.127925 TGTCTATCATCGCTTTTTGAATGCTT 60.128 34.615 0.00 0.00 0.00 3.91
3098 8580 6.749118 GTCTATCATCGCTTTTTGAATGCTTT 59.251 34.615 0.00 0.00 0.00 3.51
3099 8581 7.910162 GTCTATCATCGCTTTTTGAATGCTTTA 59.090 33.333 0.00 0.00 0.00 1.85
3100 8582 8.458052 TCTATCATCGCTTTTTGAATGCTTTAA 58.542 29.630 0.00 0.00 0.00 1.52
3101 8583 9.241317 CTATCATCGCTTTTTGAATGCTTTAAT 57.759 29.630 0.00 0.00 0.00 1.40
3102 8584 7.887996 TCATCGCTTTTTGAATGCTTTAATT 57.112 28.000 0.00 0.00 0.00 1.40
3103 8585 8.309163 TCATCGCTTTTTGAATGCTTTAATTT 57.691 26.923 0.00 0.00 0.00 1.82
3104 8586 8.222433 TCATCGCTTTTTGAATGCTTTAATTTG 58.778 29.630 0.00 0.00 0.00 2.32
3105 8587 6.886307 TCGCTTTTTGAATGCTTTAATTTGG 58.114 32.000 0.00 0.00 0.00 3.28
3106 8588 6.481644 TCGCTTTTTGAATGCTTTAATTTGGT 59.518 30.769 0.00 0.00 0.00 3.67
3107 8589 7.653713 TCGCTTTTTGAATGCTTTAATTTGGTA 59.346 29.630 0.00 0.00 0.00 3.25
3108 8590 8.279103 CGCTTTTTGAATGCTTTAATTTGGTAA 58.721 29.630 0.00 0.00 0.00 2.85
3109 8591 9.943163 GCTTTTTGAATGCTTTAATTTGGTAAA 57.057 25.926 0.00 0.00 0.00 2.01
3132 8614 8.446599 AAAAGTTATGTATATCCTCCAAACCG 57.553 34.615 0.00 0.00 0.00 4.44
3133 8615 5.548406 AGTTATGTATATCCTCCAAACCGC 58.452 41.667 0.00 0.00 0.00 5.68
3134 8616 5.071250 AGTTATGTATATCCTCCAAACCGCA 59.929 40.000 0.00 0.00 0.00 5.69
3135 8617 3.916359 TGTATATCCTCCAAACCGCAA 57.084 42.857 0.00 0.00 0.00 4.85
3136 8618 4.223556 TGTATATCCTCCAAACCGCAAA 57.776 40.909 0.00 0.00 0.00 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.250513 CTGCTCTCGGGCCTAGTTTT 59.749 55.000 0.84 0.00 0.00 2.43
1 2 0.905337 ACTGCTCTCGGGCCTAGTTT 60.905 55.000 0.84 0.00 0.00 2.66
2 3 1.305381 ACTGCTCTCGGGCCTAGTT 60.305 57.895 0.84 0.00 0.00 2.24
3 4 2.055042 CACTGCTCTCGGGCCTAGT 61.055 63.158 0.84 0.00 0.00 2.57
4 5 2.010582 GACACTGCTCTCGGGCCTAG 62.011 65.000 0.84 0.00 0.00 3.02
5 6 2.037367 ACACTGCTCTCGGGCCTA 59.963 61.111 0.84 0.00 0.00 3.93
6 7 3.386237 GACACTGCTCTCGGGCCT 61.386 66.667 0.84 0.00 0.00 5.19
7 8 4.803426 CGACACTGCTCTCGGGCC 62.803 72.222 0.00 0.00 0.00 5.80
8 9 4.803426 CCGACACTGCTCTCGGGC 62.803 72.222 0.00 0.00 44.84 6.13
11 12 4.803426 GGCCCGACACTGCTCTCG 62.803 72.222 0.00 0.00 0.00 4.04
12 13 4.803426 CGGCCCGACACTGCTCTC 62.803 72.222 0.00 0.00 0.00 3.20
28 29 4.653888 AAAGCCCAACCCGGTCCG 62.654 66.667 3.60 3.60 0.00 4.79
29 30 1.812686 GAAAAAGCCCAACCCGGTCC 61.813 60.000 0.00 0.00 0.00 4.46
30 31 1.663739 GAAAAAGCCCAACCCGGTC 59.336 57.895 0.00 0.00 0.00 4.79
31 32 2.197605 CGAAAAAGCCCAACCCGGT 61.198 57.895 0.00 0.00 0.00 5.28
32 33 2.648454 CGAAAAAGCCCAACCCGG 59.352 61.111 0.00 0.00 0.00 5.73
33 34 2.648454 CCGAAAAAGCCCAACCCG 59.352 61.111 0.00 0.00 0.00 5.28
34 35 3.056458 CCCGAAAAAGCCCAACCC 58.944 61.111 0.00 0.00 0.00 4.11
35 36 2.207229 AGCCCGAAAAAGCCCAACC 61.207 57.895 0.00 0.00 0.00 3.77
36 37 1.006220 CAGCCCGAAAAAGCCCAAC 60.006 57.895 0.00 0.00 0.00 3.77
37 38 2.206536 CCAGCCCGAAAAAGCCCAA 61.207 57.895 0.00 0.00 0.00 4.12
38 39 2.600173 CCAGCCCGAAAAAGCCCA 60.600 61.111 0.00 0.00 0.00 5.36
39 40 2.282887 TCCAGCCCGAAAAAGCCC 60.283 61.111 0.00 0.00 0.00 5.19
40 41 2.636412 GGTCCAGCCCGAAAAAGCC 61.636 63.158 0.00 0.00 0.00 4.35
41 42 2.962569 GGTCCAGCCCGAAAAAGC 59.037 61.111 0.00 0.00 0.00 3.51
52 53 2.411765 AAAAGCCTGACCCGGTCCAG 62.412 60.000 15.24 11.61 0.00 3.86
53 54 2.002018 AAAAAGCCTGACCCGGTCCA 62.002 55.000 15.24 2.61 0.00 4.02
54 55 1.228459 AAAAAGCCTGACCCGGTCC 60.228 57.895 15.24 0.00 0.00 4.46
55 56 4.494515 AAAAAGCCTGACCCGGTC 57.505 55.556 10.96 10.96 0.00 4.79
81 82 1.691196 TATACCTGGCCATTTGCAGC 58.309 50.000 5.51 0.00 43.89 5.25
82 83 2.821969 GGATATACCTGGCCATTTGCAG 59.178 50.000 5.51 0.00 37.42 4.41
83 84 2.490718 GGGATATACCTGGCCATTTGCA 60.491 50.000 5.51 0.00 39.41 4.08
84 85 2.171003 GGGATATACCTGGCCATTTGC 58.829 52.381 5.51 0.00 38.98 3.68
85 86 2.109834 TGGGGATATACCTGGCCATTTG 59.890 50.000 5.51 0.00 38.98 2.32
86 87 2.379907 CTGGGGATATACCTGGCCATTT 59.620 50.000 5.51 0.00 38.98 2.32
87 88 1.995542 CTGGGGATATACCTGGCCATT 59.004 52.381 5.51 0.00 38.98 3.16
88 89 1.673767 CTGGGGATATACCTGGCCAT 58.326 55.000 5.51 0.00 38.98 4.40
89 90 1.133809 GCTGGGGATATACCTGGCCA 61.134 60.000 4.71 4.71 38.98 5.36
90 91 1.685820 GCTGGGGATATACCTGGCC 59.314 63.158 3.33 0.00 38.98 5.36
91 92 1.685820 GGCTGGGGATATACCTGGC 59.314 63.158 3.33 8.43 43.20 4.85
92 93 0.475632 TGGGCTGGGGATATACCTGG 60.476 60.000 3.33 0.00 38.98 4.45
93 94 1.444933 TTGGGCTGGGGATATACCTG 58.555 55.000 3.33 1.37 38.98 4.00
94 95 2.458286 ATTGGGCTGGGGATATACCT 57.542 50.000 3.33 0.00 38.98 3.08
95 96 2.509964 CCTATTGGGCTGGGGATATACC 59.490 54.545 0.00 0.00 38.08 2.73
96 97 3.933861 CCTATTGGGCTGGGGATATAC 57.066 52.381 0.00 0.00 0.00 1.47
109 110 2.306847 CCGGGATTTGAACCCTATTGG 58.693 52.381 0.00 0.00 44.72 3.16
110 111 2.687935 CACCGGGATTTGAACCCTATTG 59.312 50.000 6.32 0.00 44.72 1.90
111 112 2.948600 GCACCGGGATTTGAACCCTATT 60.949 50.000 6.32 0.00 44.72 1.73
112 113 1.409661 GCACCGGGATTTGAACCCTAT 60.410 52.381 6.32 0.00 44.72 2.57
113 114 0.034863 GCACCGGGATTTGAACCCTA 60.035 55.000 6.32 0.00 44.72 3.53
114 115 1.304134 GCACCGGGATTTGAACCCT 60.304 57.895 6.32 0.00 44.72 4.34
115 116 1.304134 AGCACCGGGATTTGAACCC 60.304 57.895 6.32 0.00 43.57 4.11
116 117 0.608035 TGAGCACCGGGATTTGAACC 60.608 55.000 6.32 0.00 0.00 3.62
117 118 0.521735 GTGAGCACCGGGATTTGAAC 59.478 55.000 6.32 0.00 0.00 3.18
118 119 0.109532 TGTGAGCACCGGGATTTGAA 59.890 50.000 6.32 0.00 0.00 2.69
119 120 0.327924 ATGTGAGCACCGGGATTTGA 59.672 50.000 6.32 0.00 0.00 2.69
120 121 1.176527 AATGTGAGCACCGGGATTTG 58.823 50.000 6.32 0.00 0.00 2.32
121 122 1.923356 AAATGTGAGCACCGGGATTT 58.077 45.000 6.32 0.00 0.00 2.17
122 123 2.799126 TAAATGTGAGCACCGGGATT 57.201 45.000 6.32 0.00 0.00 3.01
123 124 2.487265 GGATAAATGTGAGCACCGGGAT 60.487 50.000 6.32 0.00 0.00 3.85
124 125 1.134220 GGATAAATGTGAGCACCGGGA 60.134 52.381 6.32 0.00 0.00 5.14
125 126 1.134098 AGGATAAATGTGAGCACCGGG 60.134 52.381 6.32 0.00 0.00 5.73
126 127 1.942657 CAGGATAAATGTGAGCACCGG 59.057 52.381 0.00 0.00 0.00 5.28
127 128 1.331756 GCAGGATAAATGTGAGCACCG 59.668 52.381 0.00 0.00 0.00 4.94
128 129 2.368439 TGCAGGATAAATGTGAGCACC 58.632 47.619 0.00 0.00 0.00 5.01
129 130 4.644103 AATGCAGGATAAATGTGAGCAC 57.356 40.909 0.00 0.00 32.92 4.40
130 131 6.964807 ATAAATGCAGGATAAATGTGAGCA 57.035 33.333 0.00 0.00 34.78 4.26
131 132 7.922278 TGAAATAAATGCAGGATAAATGTGAGC 59.078 33.333 0.00 0.00 0.00 4.26
132 133 9.459640 CTGAAATAAATGCAGGATAAATGTGAG 57.540 33.333 0.00 0.00 0.00 3.51
144 145 5.751990 GCTGGAAATCCTGAAATAAATGCAG 59.248 40.000 10.20 0.00 37.15 4.41
145 146 5.663456 GCTGGAAATCCTGAAATAAATGCA 58.337 37.500 10.20 0.00 37.15 3.96
146 147 4.741676 CGCTGGAAATCCTGAAATAAATGC 59.258 41.667 10.20 0.00 37.15 3.56
147 148 6.135290 TCGCTGGAAATCCTGAAATAAATG 57.865 37.500 10.20 0.00 37.15 2.32
148 149 6.966534 ATCGCTGGAAATCCTGAAATAAAT 57.033 33.333 10.20 0.00 37.15 1.40
149 150 6.826231 TGTATCGCTGGAAATCCTGAAATAAA 59.174 34.615 10.20 0.53 37.15 1.40
150 151 6.260050 GTGTATCGCTGGAAATCCTGAAATAA 59.740 38.462 10.20 0.00 37.15 1.40
151 152 5.758296 GTGTATCGCTGGAAATCCTGAAATA 59.242 40.000 10.20 4.41 37.15 1.40
152 153 4.576463 GTGTATCGCTGGAAATCCTGAAAT 59.424 41.667 10.20 5.22 37.15 2.17
153 154 3.938963 GTGTATCGCTGGAAATCCTGAAA 59.061 43.478 10.20 0.00 37.15 2.69
154 155 3.531538 GTGTATCGCTGGAAATCCTGAA 58.468 45.455 10.20 0.00 37.15 3.02
155 156 2.481276 CGTGTATCGCTGGAAATCCTGA 60.481 50.000 10.20 1.98 37.15 3.86
156 157 1.860950 CGTGTATCGCTGGAAATCCTG 59.139 52.381 0.44 1.39 37.93 3.86
157 158 1.480954 ACGTGTATCGCTGGAAATCCT 59.519 47.619 0.44 0.00 44.19 3.24
158 159 1.935933 ACGTGTATCGCTGGAAATCC 58.064 50.000 0.00 0.00 44.19 3.01
159 160 4.565564 ACTAAACGTGTATCGCTGGAAATC 59.434 41.667 0.00 0.00 44.19 2.17
160 161 4.328983 CACTAAACGTGTATCGCTGGAAAT 59.671 41.667 0.00 0.00 44.19 2.17
161 162 3.676172 CACTAAACGTGTATCGCTGGAAA 59.324 43.478 0.00 0.00 44.19 3.13
162 163 3.247442 CACTAAACGTGTATCGCTGGAA 58.753 45.455 0.00 0.00 44.19 3.53
163 164 2.416296 CCACTAAACGTGTATCGCTGGA 60.416 50.000 0.00 0.00 42.20 3.86
164 165 1.924524 CCACTAAACGTGTATCGCTGG 59.075 52.381 0.00 0.00 42.20 4.85
165 166 1.924524 CCCACTAAACGTGTATCGCTG 59.075 52.381 0.00 0.00 42.20 5.18
166 167 1.820519 TCCCACTAAACGTGTATCGCT 59.179 47.619 0.00 0.00 42.20 4.93
167 168 2.190981 CTCCCACTAAACGTGTATCGC 58.809 52.381 0.00 0.00 42.20 4.58
168 169 2.424601 TCCTCCCACTAAACGTGTATCG 59.575 50.000 0.00 0.00 42.20 2.92
169 170 4.667519 ATCCTCCCACTAAACGTGTATC 57.332 45.455 0.00 0.00 42.20 2.24
170 171 4.037208 CGTATCCTCCCACTAAACGTGTAT 59.963 45.833 0.00 0.00 42.20 2.29
171 172 3.378112 CGTATCCTCCCACTAAACGTGTA 59.622 47.826 0.00 0.00 42.20 2.90
172 173 2.165030 CGTATCCTCCCACTAAACGTGT 59.835 50.000 0.00 0.00 42.20 4.49
173 174 2.165030 ACGTATCCTCCCACTAAACGTG 59.835 50.000 0.00 0.00 40.23 4.49
174 175 2.450476 ACGTATCCTCCCACTAAACGT 58.550 47.619 0.00 0.00 37.28 3.99
175 176 3.442100 GAACGTATCCTCCCACTAAACG 58.558 50.000 0.00 0.00 35.17 3.60
176 177 3.790091 GGAACGTATCCTCCCACTAAAC 58.210 50.000 8.87 0.00 45.56 2.01
193 194 0.450983 CCTCGTAGTCAGACGGGAAC 59.549 60.000 0.00 0.00 46.57 3.62
194 195 0.037303 ACCTCGTAGTCAGACGGGAA 59.963 55.000 0.00 0.00 46.57 3.97
195 196 0.675837 CACCTCGTAGTCAGACGGGA 60.676 60.000 0.00 0.00 46.57 5.14
196 197 0.675837 TCACCTCGTAGTCAGACGGG 60.676 60.000 0.00 0.00 43.16 5.28
197 198 1.162698 TTCACCTCGTAGTCAGACGG 58.837 55.000 0.00 0.00 43.12 4.79
198 199 2.983402 TTTCACCTCGTAGTCAGACG 57.017 50.000 0.00 0.00 44.29 4.18
199 200 5.061920 AGATTTTCACCTCGTAGTCAGAC 57.938 43.478 0.00 0.00 0.00 3.51
200 201 5.723672 AAGATTTTCACCTCGTAGTCAGA 57.276 39.130 0.00 0.00 0.00 3.27
201 202 7.313646 TCTTAAGATTTTCACCTCGTAGTCAG 58.686 38.462 0.00 0.00 0.00 3.51
202 203 7.223260 TCTTAAGATTTTCACCTCGTAGTCA 57.777 36.000 0.00 0.00 0.00 3.41
203 204 7.222999 CCATCTTAAGATTTTCACCTCGTAGTC 59.777 40.741 15.49 0.00 31.21 2.59
204 205 7.042335 CCATCTTAAGATTTTCACCTCGTAGT 58.958 38.462 15.49 0.00 31.21 2.73
205 206 7.010552 CACCATCTTAAGATTTTCACCTCGTAG 59.989 40.741 15.49 0.00 31.21 3.51
206 207 6.816640 CACCATCTTAAGATTTTCACCTCGTA 59.183 38.462 15.49 0.00 31.21 3.43
207 208 5.643777 CACCATCTTAAGATTTTCACCTCGT 59.356 40.000 15.49 0.00 31.21 4.18
208 209 5.643777 ACACCATCTTAAGATTTTCACCTCG 59.356 40.000 15.49 1.37 31.21 4.63
209 210 6.431234 ACACACCATCTTAAGATTTTCACCTC 59.569 38.462 15.49 0.00 31.21 3.85
210 211 6.306987 ACACACCATCTTAAGATTTTCACCT 58.693 36.000 15.49 0.00 31.21 4.00
211 212 6.575162 ACACACCATCTTAAGATTTTCACC 57.425 37.500 15.49 0.00 31.21 4.02
212 213 6.307155 CGACACACCATCTTAAGATTTTCAC 58.693 40.000 15.49 4.08 31.21 3.18
213 214 5.411361 CCGACACACCATCTTAAGATTTTCA 59.589 40.000 15.49 0.00 31.21 2.69
214 215 5.673818 GCCGACACACCATCTTAAGATTTTC 60.674 44.000 15.49 3.50 31.21 2.29
215 216 4.156008 GCCGACACACCATCTTAAGATTTT 59.844 41.667 15.49 2.62 31.21 1.82
216 217 3.689649 GCCGACACACCATCTTAAGATTT 59.310 43.478 15.49 2.99 31.21 2.17
217 218 3.055094 AGCCGACACACCATCTTAAGATT 60.055 43.478 15.49 0.00 31.21 2.40
218 219 2.501723 AGCCGACACACCATCTTAAGAT 59.498 45.455 12.37 12.37 34.56 2.40
219 220 1.899814 AGCCGACACACCATCTTAAGA 59.100 47.619 7.82 7.82 0.00 2.10
220 221 2.271800 GAGCCGACACACCATCTTAAG 58.728 52.381 0.00 0.00 0.00 1.85
221 222 1.621317 TGAGCCGACACACCATCTTAA 59.379 47.619 0.00 0.00 0.00 1.85
222 223 1.262417 TGAGCCGACACACCATCTTA 58.738 50.000 0.00 0.00 0.00 2.10
223 224 0.396435 TTGAGCCGACACACCATCTT 59.604 50.000 0.00 0.00 0.00 2.40
224 225 0.615331 ATTGAGCCGACACACCATCT 59.385 50.000 0.00 0.00 0.00 2.90
225 226 1.009829 GATTGAGCCGACACACCATC 58.990 55.000 0.00 0.00 0.00 3.51
226 227 0.615331 AGATTGAGCCGACACACCAT 59.385 50.000 0.00 0.00 0.00 3.55
227 228 0.037326 GAGATTGAGCCGACACACCA 60.037 55.000 0.00 0.00 0.00 4.17
228 229 0.247736 AGAGATTGAGCCGACACACC 59.752 55.000 0.00 0.00 0.00 4.16
229 230 1.067565 TGAGAGATTGAGCCGACACAC 60.068 52.381 0.00 0.00 0.00 3.82
230 231 1.203287 CTGAGAGATTGAGCCGACACA 59.797 52.381 0.00 0.00 0.00 3.72
231 232 1.474478 TCTGAGAGATTGAGCCGACAC 59.526 52.381 0.00 0.00 0.00 3.67
232 233 1.747924 CTCTGAGAGATTGAGCCGACA 59.252 52.381 2.60 0.00 0.00 4.35
233 234 1.066908 CCTCTGAGAGATTGAGCCGAC 59.933 57.143 11.82 0.00 0.00 4.79
234 235 1.341482 ACCTCTGAGAGATTGAGCCGA 60.341 52.381 11.82 0.00 0.00 5.54
235 236 1.110442 ACCTCTGAGAGATTGAGCCG 58.890 55.000 11.82 0.00 0.00 5.52
236 237 1.473080 GCACCTCTGAGAGATTGAGCC 60.473 57.143 11.82 0.00 0.00 4.70
237 238 1.481772 AGCACCTCTGAGAGATTGAGC 59.518 52.381 11.82 4.84 0.00 4.26
238 239 2.223548 CGAGCACCTCTGAGAGATTGAG 60.224 54.545 11.82 0.00 0.00 3.02
239 240 1.747924 CGAGCACCTCTGAGAGATTGA 59.252 52.381 11.82 0.00 0.00 2.57
240 241 1.476085 ACGAGCACCTCTGAGAGATTG 59.524 52.381 11.82 8.74 0.00 2.67
241 242 1.846007 ACGAGCACCTCTGAGAGATT 58.154 50.000 11.82 0.00 0.00 2.40
242 243 2.719531 TACGAGCACCTCTGAGAGAT 57.280 50.000 11.82 0.00 0.00 2.75
243 244 2.360844 CTTACGAGCACCTCTGAGAGA 58.639 52.381 11.82 0.00 0.00 3.10
244 245 1.403679 CCTTACGAGCACCTCTGAGAG 59.596 57.143 6.17 1.57 0.00 3.20
245 246 1.464734 CCTTACGAGCACCTCTGAGA 58.535 55.000 6.17 0.00 0.00 3.27
246 247 0.457851 CCCTTACGAGCACCTCTGAG 59.542 60.000 0.00 0.00 0.00 3.35
247 248 0.251653 ACCCTTACGAGCACCTCTGA 60.252 55.000 0.00 0.00 0.00 3.27
248 249 1.405821 CTACCCTTACGAGCACCTCTG 59.594 57.143 0.00 0.00 0.00 3.35
249 250 1.005687 ACTACCCTTACGAGCACCTCT 59.994 52.381 0.00 0.00 0.00 3.69
250 251 1.134560 CACTACCCTTACGAGCACCTC 59.865 57.143 0.00 0.00 0.00 3.85
251 252 1.183549 CACTACCCTTACGAGCACCT 58.816 55.000 0.00 0.00 0.00 4.00
252 253 1.134560 CTCACTACCCTTACGAGCACC 59.865 57.143 0.00 0.00 0.00 5.01
253 254 1.817447 ACTCACTACCCTTACGAGCAC 59.183 52.381 0.00 0.00 0.00 4.40
254 255 1.816835 CACTCACTACCCTTACGAGCA 59.183 52.381 0.00 0.00 0.00 4.26
255 256 1.817447 ACACTCACTACCCTTACGAGC 59.183 52.381 0.00 0.00 0.00 5.03
256 257 2.415625 GCACACTCACTACCCTTACGAG 60.416 54.545 0.00 0.00 0.00 4.18
257 258 1.542915 GCACACTCACTACCCTTACGA 59.457 52.381 0.00 0.00 0.00 3.43
258 259 1.403780 GGCACACTCACTACCCTTACG 60.404 57.143 0.00 0.00 0.00 3.18
259 260 1.900486 AGGCACACTCACTACCCTTAC 59.100 52.381 0.00 0.00 0.00 2.34
260 261 2.320681 AGGCACACTCACTACCCTTA 57.679 50.000 0.00 0.00 0.00 2.69
261 262 1.348036 GAAGGCACACTCACTACCCTT 59.652 52.381 0.00 0.00 35.52 3.95
262 263 0.977395 GAAGGCACACTCACTACCCT 59.023 55.000 0.00 0.00 0.00 4.34
263 264 0.685097 TGAAGGCACACTCACTACCC 59.315 55.000 0.00 0.00 0.00 3.69
264 265 2.770164 ATGAAGGCACACTCACTACC 57.230 50.000 0.00 0.00 0.00 3.18
265 266 4.720649 TCTATGAAGGCACACTCACTAC 57.279 45.455 0.00 0.00 0.00 2.73
266 267 4.711846 ACATCTATGAAGGCACACTCACTA 59.288 41.667 0.00 0.00 0.00 2.74
267 268 3.517100 ACATCTATGAAGGCACACTCACT 59.483 43.478 0.00 0.00 0.00 3.41
268 269 3.620374 CACATCTATGAAGGCACACTCAC 59.380 47.826 0.00 0.00 0.00 3.51
269 270 3.515104 TCACATCTATGAAGGCACACTCA 59.485 43.478 0.00 0.00 0.00 3.41
270 271 4.118410 CTCACATCTATGAAGGCACACTC 58.882 47.826 0.00 0.00 0.00 3.51
271 272 3.517100 ACTCACATCTATGAAGGCACACT 59.483 43.478 0.00 0.00 0.00 3.55
272 273 3.620374 CACTCACATCTATGAAGGCACAC 59.380 47.826 0.00 0.00 0.00 3.82
273 274 3.261643 ACACTCACATCTATGAAGGCACA 59.738 43.478 0.00 0.00 0.00 4.57
274 275 3.866651 ACACTCACATCTATGAAGGCAC 58.133 45.455 0.00 0.00 0.00 5.01
275 276 5.604565 CATACACTCACATCTATGAAGGCA 58.395 41.667 0.00 0.00 0.00 4.75
276 277 4.450419 GCATACACTCACATCTATGAAGGC 59.550 45.833 0.00 0.00 0.00 4.35
277 278 4.683320 CGCATACACTCACATCTATGAAGG 59.317 45.833 0.00 0.00 0.00 3.46
278 279 5.174579 CACGCATACACTCACATCTATGAAG 59.825 44.000 0.00 0.00 0.00 3.02
279 280 5.043248 CACGCATACACTCACATCTATGAA 58.957 41.667 0.00 0.00 0.00 2.57
280 281 4.097892 ACACGCATACACTCACATCTATGA 59.902 41.667 0.00 0.00 0.00 2.15
281 282 4.363138 ACACGCATACACTCACATCTATG 58.637 43.478 0.00 0.00 0.00 2.23
282 283 4.655762 ACACGCATACACTCACATCTAT 57.344 40.909 0.00 0.00 0.00 1.98
283 284 5.767816 ATACACGCATACACTCACATCTA 57.232 39.130 0.00 0.00 0.00 1.98
284 285 4.655762 ATACACGCATACACTCACATCT 57.344 40.909 0.00 0.00 0.00 2.90
285 286 7.968405 TCATATATACACGCATACACTCACATC 59.032 37.037 0.00 0.00 0.00 3.06
286 287 7.826690 TCATATATACACGCATACACTCACAT 58.173 34.615 0.00 0.00 0.00 3.21
287 288 7.209471 TCATATATACACGCATACACTCACA 57.791 36.000 0.00 0.00 0.00 3.58
288 289 6.251589 GCTCATATATACACGCATACACTCAC 59.748 42.308 0.00 0.00 0.00 3.51
289 290 6.151144 AGCTCATATATACACGCATACACTCA 59.849 38.462 0.00 0.00 0.00 3.41
290 291 6.556212 AGCTCATATATACACGCATACACTC 58.444 40.000 0.00 0.00 0.00 3.51
291 292 6.516739 AGCTCATATATACACGCATACACT 57.483 37.500 0.00 0.00 0.00 3.55
292 293 6.586463 ACAAGCTCATATATACACGCATACAC 59.414 38.462 0.00 0.00 0.00 2.90
293 294 6.586082 CACAAGCTCATATATACACGCATACA 59.414 38.462 0.00 0.00 0.00 2.29
294 295 6.586463 ACACAAGCTCATATATACACGCATAC 59.414 38.462 0.00 0.00 0.00 2.39
295 296 6.687604 ACACAAGCTCATATATACACGCATA 58.312 36.000 0.00 0.00 0.00 3.14
296 297 5.541845 ACACAAGCTCATATATACACGCAT 58.458 37.500 0.00 0.00 0.00 4.73
297 298 4.944048 ACACAAGCTCATATATACACGCA 58.056 39.130 0.00 0.00 0.00 5.24
298 299 5.907197 AACACAAGCTCATATATACACGC 57.093 39.130 0.00 0.00 0.00 5.34
299 300 7.222805 ACAGAAACACAAGCTCATATATACACG 59.777 37.037 0.00 0.00 0.00 4.49
300 301 8.425577 ACAGAAACACAAGCTCATATATACAC 57.574 34.615 0.00 0.00 0.00 2.90
301 302 9.529325 GTACAGAAACACAAGCTCATATATACA 57.471 33.333 0.00 0.00 0.00 2.29
302 303 9.751542 AGTACAGAAACACAAGCTCATATATAC 57.248 33.333 0.00 0.00 0.00 1.47
303 304 9.750125 CAGTACAGAAACACAAGCTCATATATA 57.250 33.333 0.00 0.00 0.00 0.86
304 305 8.478066 TCAGTACAGAAACACAAGCTCATATAT 58.522 33.333 0.00 0.00 0.00 0.86
305 306 7.836842 TCAGTACAGAAACACAAGCTCATATA 58.163 34.615 0.00 0.00 0.00 0.86
306 307 6.701340 TCAGTACAGAAACACAAGCTCATAT 58.299 36.000 0.00 0.00 0.00 1.78
307 308 6.096673 TCAGTACAGAAACACAAGCTCATA 57.903 37.500 0.00 0.00 0.00 2.15
308 309 4.960938 TCAGTACAGAAACACAAGCTCAT 58.039 39.130 0.00 0.00 0.00 2.90
309 310 4.400529 TCAGTACAGAAACACAAGCTCA 57.599 40.909 0.00 0.00 0.00 4.26
310 311 4.752101 ACATCAGTACAGAAACACAAGCTC 59.248 41.667 0.00 0.00 0.00 4.09
311 312 4.708177 ACATCAGTACAGAAACACAAGCT 58.292 39.130 0.00 0.00 0.00 3.74
312 313 5.424121 AACATCAGTACAGAAACACAAGC 57.576 39.130 0.00 0.00 0.00 4.01
313 314 9.781834 TTTTAAACATCAGTACAGAAACACAAG 57.218 29.630 0.00 0.00 0.00 3.16
338 339 6.779115 ACGAAGTTTTGAAGCTTTGTTTTT 57.221 29.167 0.00 0.00 37.78 1.94
339 340 9.744468 ATATACGAAGTTTTGAAGCTTTGTTTT 57.256 25.926 15.41 8.72 37.78 2.43
340 341 9.180678 CATATACGAAGTTTTGAAGCTTTGTTT 57.819 29.630 15.41 11.50 37.78 2.83
341 342 8.564574 TCATATACGAAGTTTTGAAGCTTTGTT 58.435 29.630 15.41 8.52 37.78 2.83
342 343 8.094798 TCATATACGAAGTTTTGAAGCTTTGT 57.905 30.769 14.82 14.82 37.78 2.83
343 344 7.217070 GCTCATATACGAAGTTTTGAAGCTTTG 59.783 37.037 0.00 6.15 37.78 2.77
344 345 7.094805 TGCTCATATACGAAGTTTTGAAGCTTT 60.095 33.333 0.00 0.00 37.78 3.51
345 346 6.371548 TGCTCATATACGAAGTTTTGAAGCTT 59.628 34.615 0.00 0.00 37.78 3.74
346 347 5.874810 TGCTCATATACGAAGTTTTGAAGCT 59.125 36.000 0.00 0.00 37.78 3.74
347 348 5.960105 GTGCTCATATACGAAGTTTTGAAGC 59.040 40.000 0.00 0.00 37.78 3.86
348 349 6.034577 TCGTGCTCATATACGAAGTTTTGAAG 59.965 38.462 0.00 0.00 45.18 3.02
349 350 5.865013 TCGTGCTCATATACGAAGTTTTGAA 59.135 36.000 0.00 0.00 45.18 2.69
350 351 5.404096 TCGTGCTCATATACGAAGTTTTGA 58.596 37.500 0.00 0.00 45.18 2.69
351 352 5.696260 TCGTGCTCATATACGAAGTTTTG 57.304 39.130 0.00 0.00 45.18 2.44
579 580 0.238553 GTCTCAACTGCCTTTTCCGC 59.761 55.000 0.00 0.00 0.00 5.54
593 594 1.087501 CGATCGACTGACCTGTCTCA 58.912 55.000 10.26 0.00 35.00 3.27
766 777 4.593864 GAGGAGGTCGCCGATGGC 62.594 72.222 0.00 0.00 46.75 4.40
767 778 3.917760 GGAGGAGGTCGCCGATGG 61.918 72.222 0.00 0.00 0.00 3.51
768 779 3.917760 GGGAGGAGGTCGCCGATG 61.918 72.222 0.00 0.00 36.06 3.84
897 909 3.179830 CCGTACAAGCTAGCTACAACAG 58.820 50.000 19.70 8.24 0.00 3.16
898 910 2.673043 GCCGTACAAGCTAGCTACAACA 60.673 50.000 19.70 0.00 0.00 3.33
937 949 2.956964 GAGCGAGCGACCAATCCG 60.957 66.667 0.00 0.00 0.00 4.18
1026 1038 1.514553 CAGCGTGATCTGCTCCAGA 59.485 57.895 9.66 0.00 44.99 3.86
1143 1155 1.615107 CGACGCTGAAGAACCCGAAC 61.615 60.000 0.00 0.00 0.00 3.95
1230 1242 3.452786 TCCTTCTCCGCCTGCGAG 61.453 66.667 13.94 8.66 42.83 5.03
1491 1503 4.082523 CCCGTCACCATGTCCGCT 62.083 66.667 0.00 0.00 0.00 5.52
1537 1549 2.344500 CGGCGGGTAGTGGTTCAA 59.656 61.111 0.00 0.00 0.00 2.69
1752 1764 3.710724 TGGGCCTGAATGAATGAATGAA 58.289 40.909 4.53 0.00 0.00 2.57
1753 1765 3.385314 TGGGCCTGAATGAATGAATGA 57.615 42.857 4.53 0.00 0.00 2.57
1759 1771 2.905415 TGAGTTGGGCCTGAATGAAT 57.095 45.000 4.53 0.00 0.00 2.57
1763 1775 0.040058 TGCATGAGTTGGGCCTGAAT 59.960 50.000 4.53 0.00 0.00 2.57
1764 1776 0.895100 GTGCATGAGTTGGGCCTGAA 60.895 55.000 4.53 0.00 0.00 3.02
1774 1786 2.347490 GTCCACCGGTGCATGAGT 59.653 61.111 29.75 0.00 0.00 3.41
1787 1803 4.986645 TCGTCGTCGGTCCGTCCA 62.987 66.667 11.88 0.00 37.69 4.02
1872 1888 4.704103 ACGCTCCTCAGCCTCCCA 62.704 66.667 0.00 0.00 43.56 4.37
2019 2044 4.843728 TCTTGTATTCTCCCCATGTGAAC 58.156 43.478 0.00 0.00 29.86 3.18
2034 2059 0.468648 GGTAGGCCGCCTTCTTGTAT 59.531 55.000 19.35 0.00 34.61 2.29
2076 2101 3.787001 GTCTCGAAGGGGGCCAGG 61.787 72.222 4.39 0.00 0.00 4.45
2123 2148 2.203877 TTGGCTAGGACCGGTGGT 60.204 61.111 14.63 0.00 39.44 4.16
2139 2164 1.591594 CGCGGCGATGTATGTCCTT 60.592 57.895 19.16 0.00 0.00 3.36
2140 2165 2.027605 CGCGGCGATGTATGTCCT 59.972 61.111 19.16 0.00 0.00 3.85
2141 2166 2.027024 TCGCGGCGATGTATGTCC 59.973 61.111 22.69 0.00 0.00 4.02
2142 2167 0.939577 ATGTCGCGGCGATGTATGTC 60.940 55.000 28.95 13.83 38.42 3.06
2165 2198 1.615392 ACGTACGAAAGCTACCAAGGT 59.385 47.619 24.41 0.00 34.01 3.50
2276 2309 3.019564 TCCAACCTTAGGTACGTAGCTC 58.980 50.000 29.09 6.49 33.12 4.09
2466 6856 1.666553 TGTCAACTGTTAGCGGCCG 60.667 57.895 24.05 24.05 0.00 6.13
2485 6875 1.533731 ACATACCAAACTTTCACCGCG 59.466 47.619 0.00 0.00 0.00 6.46
2500 6890 1.653151 GGAAAGGCTCCGACACATAC 58.347 55.000 0.00 0.00 33.37 2.39
2613 8085 2.609002 GTGGAAGCAACAAAAGCAAAGG 59.391 45.455 0.00 0.00 0.00 3.11
2667 8139 2.998480 ACCACGGTCATACGCCCA 60.998 61.111 0.00 0.00 37.37 5.36
2668 8140 2.202837 GACCACGGTCATACGCCC 60.203 66.667 11.43 0.00 44.02 6.13
2669 8141 2.202837 GGACCACGGTCATACGCC 60.203 66.667 17.72 0.00 46.20 5.68
2709 8181 1.190323 GATCGGATGCGAGTTAAAGCG 59.810 52.381 16.21 0.00 35.87 4.68
2719 8191 2.094894 GGCAAATATCAGATCGGATGCG 59.905 50.000 17.41 0.00 0.00 4.73
2725 8197 3.662713 CGCGAAAGGCAAATATCAGATCG 60.663 47.826 0.00 0.00 43.84 3.69
2729 8201 1.597937 GGCGCGAAAGGCAAATATCAG 60.598 52.381 12.10 0.00 43.84 2.90
2730 8202 0.380378 GGCGCGAAAGGCAAATATCA 59.620 50.000 12.10 0.00 43.84 2.15
2731 8203 0.380378 TGGCGCGAAAGGCAAATATC 59.620 50.000 12.10 0.00 43.90 1.63
2732 8204 2.487918 TGGCGCGAAAGGCAAATAT 58.512 47.368 12.10 0.00 43.90 1.28
2733 8205 3.988934 TGGCGCGAAAGGCAAATA 58.011 50.000 12.10 0.00 43.90 1.40
2811 8292 2.570169 CGTTTGTAATCACTGTTGCGG 58.430 47.619 0.00 0.00 0.00 5.69
2814 8295 3.003275 ACTGCCGTTTGTAATCACTGTTG 59.997 43.478 0.00 0.00 0.00 3.33
2816 8297 2.846193 ACTGCCGTTTGTAATCACTGT 58.154 42.857 0.00 0.00 0.00 3.55
2817 8298 4.391830 ACATACTGCCGTTTGTAATCACTG 59.608 41.667 2.67 0.00 34.25 3.66
2854 8335 7.444558 TGTTTTTCGTAAAATGACTTCAAGC 57.555 32.000 3.18 0.00 35.80 4.01
2882 8363 9.760077 AGTACCGATTTCACAAGTATTTATAGG 57.240 33.333 0.00 0.00 0.00 2.57
2935 8417 4.133796 GCATGCAAGTTCCCCCGC 62.134 66.667 14.21 0.00 0.00 6.13
2941 8423 2.555757 AGTCAAGGAAGCATGCAAGTTC 59.444 45.455 21.98 14.68 0.00 3.01
2942 8424 2.555757 GAGTCAAGGAAGCATGCAAGTT 59.444 45.455 21.98 5.25 0.00 2.66
2943 8425 2.157738 GAGTCAAGGAAGCATGCAAGT 58.842 47.619 21.98 4.09 0.00 3.16
2944 8426 1.129998 CGAGTCAAGGAAGCATGCAAG 59.870 52.381 21.98 2.63 0.00 4.01
2945 8427 1.159285 CGAGTCAAGGAAGCATGCAA 58.841 50.000 21.98 0.00 0.00 4.08
2946 8428 0.035317 ACGAGTCAAGGAAGCATGCA 59.965 50.000 21.98 0.00 0.00 3.96
2947 8429 2.010145 TACGAGTCAAGGAAGCATGC 57.990 50.000 10.51 10.51 0.00 4.06
2948 8430 4.437239 AGATTACGAGTCAAGGAAGCATG 58.563 43.478 0.00 0.00 0.00 4.06
2949 8431 4.160439 TGAGATTACGAGTCAAGGAAGCAT 59.840 41.667 0.00 0.00 0.00 3.79
2950 8432 3.509967 TGAGATTACGAGTCAAGGAAGCA 59.490 43.478 0.00 0.00 0.00 3.91
2951 8433 3.860536 GTGAGATTACGAGTCAAGGAAGC 59.139 47.826 0.00 0.00 0.00 3.86
2952 8434 5.060662 TGTGAGATTACGAGTCAAGGAAG 57.939 43.478 0.00 0.00 0.00 3.46
2953 8435 5.661056 ATGTGAGATTACGAGTCAAGGAA 57.339 39.130 0.00 0.00 0.00 3.36
2954 8436 5.661056 AATGTGAGATTACGAGTCAAGGA 57.339 39.130 0.00 0.00 0.00 3.36
2955 8437 6.811665 TGTTAATGTGAGATTACGAGTCAAGG 59.188 38.462 0.00 0.00 0.00 3.61
2956 8438 7.812309 TGTTAATGTGAGATTACGAGTCAAG 57.188 36.000 0.00 0.00 0.00 3.02
2957 8439 8.492748 GTTTGTTAATGTGAGATTACGAGTCAA 58.507 33.333 0.00 0.00 0.00 3.18
2958 8440 7.654116 TGTTTGTTAATGTGAGATTACGAGTCA 59.346 33.333 0.00 0.00 0.00 3.41
2959 8441 8.014322 TGTTTGTTAATGTGAGATTACGAGTC 57.986 34.615 0.00 0.00 0.00 3.36
2960 8442 7.956420 TGTTTGTTAATGTGAGATTACGAGT 57.044 32.000 0.00 0.00 0.00 4.18
2961 8443 9.658475 TTTTGTTTGTTAATGTGAGATTACGAG 57.342 29.630 0.00 0.00 0.00 4.18
2962 8444 9.440784 GTTTTGTTTGTTAATGTGAGATTACGA 57.559 29.630 0.00 0.00 0.00 3.43
2963 8445 9.445786 AGTTTTGTTTGTTAATGTGAGATTACG 57.554 29.630 0.00 0.00 0.00 3.18
2984 8466 5.887214 AAGGCCAGACCAAAAATAGTTTT 57.113 34.783 5.01 0.00 43.14 2.43
2985 8467 5.610398 CAAAGGCCAGACCAAAAATAGTTT 58.390 37.500 5.01 0.00 43.14 2.66
2986 8468 4.503123 GCAAAGGCCAGACCAAAAATAGTT 60.503 41.667 5.01 0.00 43.14 2.24
2987 8469 3.006859 GCAAAGGCCAGACCAAAAATAGT 59.993 43.478 5.01 0.00 43.14 2.12
2988 8470 3.588955 GCAAAGGCCAGACCAAAAATAG 58.411 45.455 5.01 0.00 43.14 1.73
2989 8471 2.029470 CGCAAAGGCCAGACCAAAAATA 60.029 45.455 5.01 0.00 43.14 1.40
2990 8472 1.270252 CGCAAAGGCCAGACCAAAAAT 60.270 47.619 5.01 0.00 43.14 1.82
2991 8473 0.103937 CGCAAAGGCCAGACCAAAAA 59.896 50.000 5.01 0.00 43.14 1.94
2992 8474 1.040339 ACGCAAAGGCCAGACCAAAA 61.040 50.000 5.01 0.00 43.14 2.44
2993 8475 0.179015 TACGCAAAGGCCAGACCAAA 60.179 50.000 5.01 0.00 43.14 3.28
2994 8476 0.605319 CTACGCAAAGGCCAGACCAA 60.605 55.000 5.01 0.00 43.14 3.67
2995 8477 1.003839 CTACGCAAAGGCCAGACCA 60.004 57.895 5.01 0.00 43.14 4.02
2996 8478 0.605589 AACTACGCAAAGGCCAGACC 60.606 55.000 5.01 0.00 36.38 3.85
2997 8479 2.088950 TAACTACGCAAAGGCCAGAC 57.911 50.000 5.01 0.00 36.38 3.51
2998 8480 2.614481 CCTTAACTACGCAAAGGCCAGA 60.614 50.000 5.01 0.00 33.84 3.86
2999 8481 1.737793 CCTTAACTACGCAAAGGCCAG 59.262 52.381 5.01 0.00 33.84 4.85
3000 8482 1.072648 ACCTTAACTACGCAAAGGCCA 59.927 47.619 5.01 0.00 42.99 5.36
3001 8483 1.467342 CACCTTAACTACGCAAAGGCC 59.533 52.381 0.00 0.00 42.99 5.19
3002 8484 1.135774 GCACCTTAACTACGCAAAGGC 60.136 52.381 0.31 0.00 42.99 4.35
3003 8485 2.095919 GTGCACCTTAACTACGCAAAGG 60.096 50.000 5.22 0.00 44.45 3.11
3004 8486 2.546368 TGTGCACCTTAACTACGCAAAG 59.454 45.455 15.69 0.00 33.76 2.77
3005 8487 2.288458 GTGTGCACCTTAACTACGCAAA 59.712 45.455 15.69 0.00 33.76 3.68
3006 8488 1.868498 GTGTGCACCTTAACTACGCAA 59.132 47.619 15.69 0.00 33.76 4.85
3007 8489 1.202545 TGTGTGCACCTTAACTACGCA 60.203 47.619 15.69 0.00 0.00 5.24
3008 8490 1.459592 CTGTGTGCACCTTAACTACGC 59.540 52.381 15.69 0.00 0.00 4.42
3009 8491 1.459592 GCTGTGTGCACCTTAACTACG 59.540 52.381 15.69 2.09 42.31 3.51
3010 8492 1.804748 GGCTGTGTGCACCTTAACTAC 59.195 52.381 15.69 4.20 45.15 2.73
3011 8493 1.606994 CGGCTGTGTGCACCTTAACTA 60.607 52.381 15.69 0.00 45.15 2.24
3012 8494 0.884704 CGGCTGTGTGCACCTTAACT 60.885 55.000 15.69 0.00 45.15 2.24
3013 8495 1.164041 ACGGCTGTGTGCACCTTAAC 61.164 55.000 15.69 6.22 45.15 2.01
3014 8496 0.882927 GACGGCTGTGTGCACCTTAA 60.883 55.000 15.69 0.00 45.15 1.85
3015 8497 1.301401 GACGGCTGTGTGCACCTTA 60.301 57.895 15.69 0.00 45.15 2.69
3016 8498 2.591715 GACGGCTGTGTGCACCTT 60.592 61.111 15.69 0.00 45.15 3.50
3017 8499 1.826340 TATGACGGCTGTGTGCACCT 61.826 55.000 15.69 0.00 45.15 4.00
3018 8500 0.953471 TTATGACGGCTGTGTGCACC 60.953 55.000 15.69 6.37 45.15 5.01
3019 8501 0.871722 TTTATGACGGCTGTGTGCAC 59.128 50.000 10.75 10.75 45.15 4.57
3020 8502 0.871722 GTTTATGACGGCTGTGTGCA 59.128 50.000 0.80 0.00 45.15 4.57
3021 8503 0.871722 TGTTTATGACGGCTGTGTGC 59.128 50.000 0.80 0.00 41.94 4.57
3022 8504 2.483877 ACATGTTTATGACGGCTGTGTG 59.516 45.455 0.80 0.00 37.73 3.82
3023 8505 2.483877 CACATGTTTATGACGGCTGTGT 59.516 45.455 0.80 0.00 37.73 3.72
3024 8506 2.159531 CCACATGTTTATGACGGCTGTG 60.160 50.000 0.80 0.00 37.73 3.66
3025 8507 2.083774 CCACATGTTTATGACGGCTGT 58.916 47.619 0.00 0.00 37.73 4.40
3026 8508 2.083774 ACCACATGTTTATGACGGCTG 58.916 47.619 0.00 0.00 37.73 4.85
3027 8509 2.027192 AGACCACATGTTTATGACGGCT 60.027 45.455 0.00 0.00 37.73 5.52
3028 8510 2.351726 GAGACCACATGTTTATGACGGC 59.648 50.000 0.00 0.00 37.73 5.68
3029 8511 3.595173 TGAGACCACATGTTTATGACGG 58.405 45.455 0.00 0.00 37.73 4.79
3030 8512 5.605564 TTTGAGACCACATGTTTATGACG 57.394 39.130 0.00 0.00 37.73 4.35
3061 8543 2.579207 TGATAGACAGGCAACGTAGC 57.421 50.000 0.00 0.00 46.39 3.58
3062 8544 3.300857 CGATGATAGACAGGCAACGTAG 58.699 50.000 0.00 0.00 46.39 3.51
3063 8545 2.543031 GCGATGATAGACAGGCAACGTA 60.543 50.000 0.00 0.00 46.39 3.57
3064 8546 1.802880 GCGATGATAGACAGGCAACGT 60.803 52.381 0.00 0.00 46.39 3.99
3065 8547 0.855349 GCGATGATAGACAGGCAACG 59.145 55.000 0.00 0.00 46.39 4.10
3066 8548 2.231215 AGCGATGATAGACAGGCAAC 57.769 50.000 0.00 0.00 35.34 4.17
3067 8549 2.988010 AAGCGATGATAGACAGGCAA 57.012 45.000 0.00 0.00 35.34 4.52
3068 8550 2.988010 AAAGCGATGATAGACAGGCA 57.012 45.000 0.00 0.00 35.34 4.75
3069 8551 3.623060 TCAAAAAGCGATGATAGACAGGC 59.377 43.478 0.00 0.00 33.83 4.85
3070 8552 5.801350 TTCAAAAAGCGATGATAGACAGG 57.199 39.130 0.00 0.00 0.00 4.00
3071 8553 5.680229 GCATTCAAAAAGCGATGATAGACAG 59.320 40.000 0.00 0.00 0.00 3.51
3072 8554 5.355071 AGCATTCAAAAAGCGATGATAGACA 59.645 36.000 0.00 0.00 0.00 3.41
3073 8555 5.814783 AGCATTCAAAAAGCGATGATAGAC 58.185 37.500 0.00 0.00 0.00 2.59
3074 8556 6.441093 AAGCATTCAAAAAGCGATGATAGA 57.559 33.333 0.00 0.00 0.00 1.98
3075 8557 8.619146 TTAAAGCATTCAAAAAGCGATGATAG 57.381 30.769 0.00 0.00 0.00 2.08
3076 8558 9.585099 AATTAAAGCATTCAAAAAGCGATGATA 57.415 25.926 0.00 0.00 0.00 2.15
3077 8559 8.483307 AATTAAAGCATTCAAAAAGCGATGAT 57.517 26.923 0.00 0.00 0.00 2.45
3078 8560 7.887996 AATTAAAGCATTCAAAAAGCGATGA 57.112 28.000 0.00 0.00 0.00 2.92
3079 8561 7.479291 CCAAATTAAAGCATTCAAAAAGCGATG 59.521 33.333 0.00 0.00 0.00 3.84
3080 8562 7.173047 ACCAAATTAAAGCATTCAAAAAGCGAT 59.827 29.630 0.00 0.00 0.00 4.58
3081 8563 6.481644 ACCAAATTAAAGCATTCAAAAAGCGA 59.518 30.769 0.00 0.00 0.00 4.93
3082 8564 6.657888 ACCAAATTAAAGCATTCAAAAAGCG 58.342 32.000 0.00 0.00 0.00 4.68
3083 8565 9.943163 TTTACCAAATTAAAGCATTCAAAAAGC 57.057 25.926 0.00 0.00 0.00 3.51
3106 8588 9.550406 CGGTTTGGAGGATATACATAACTTTTA 57.450 33.333 0.00 0.00 0.00 1.52
3107 8589 7.012989 GCGGTTTGGAGGATATACATAACTTTT 59.987 37.037 0.00 0.00 0.00 2.27
3108 8590 6.485648 GCGGTTTGGAGGATATACATAACTTT 59.514 38.462 0.00 0.00 0.00 2.66
3109 8591 5.995897 GCGGTTTGGAGGATATACATAACTT 59.004 40.000 0.00 0.00 0.00 2.66
3110 8592 5.071250 TGCGGTTTGGAGGATATACATAACT 59.929 40.000 0.00 0.00 0.00 2.24
3111 8593 5.302360 TGCGGTTTGGAGGATATACATAAC 58.698 41.667 0.00 0.00 0.00 1.89
3112 8594 5.554437 TGCGGTTTGGAGGATATACATAA 57.446 39.130 0.00 0.00 0.00 1.90
3113 8595 5.554437 TTGCGGTTTGGAGGATATACATA 57.446 39.130 0.00 0.00 0.00 2.29
3114 8596 4.431416 TTGCGGTTTGGAGGATATACAT 57.569 40.909 0.00 0.00 0.00 2.29
3115 8597 3.916359 TTGCGGTTTGGAGGATATACA 57.084 42.857 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.