Multiple sequence alignment - TraesCS1B01G343600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G343600 chr1B 100.000 2476 0 0 1 2476 572208280 572210755 0.000000e+00 4573.0
1 TraesCS1B01G343600 chrUn 95.292 1508 50 14 1 1505 260962686 260964175 0.000000e+00 2372.0
2 TraesCS1B01G343600 chrUn 95.159 1508 53 13 1 1505 200779675 200781165 0.000000e+00 2362.0
3 TraesCS1B01G343600 chrUn 95.093 1508 54 13 1 1505 234324838 234323348 0.000000e+00 2357.0
4 TraesCS1B01G343600 chrUn 95.027 1508 55 15 1 1505 200673514 200672024 0.000000e+00 2351.0
5 TraesCS1B01G343600 chrUn 94.845 1513 57 8 1 1510 200754740 200756234 0.000000e+00 2342.0
6 TraesCS1B01G343600 chrUn 94.828 1508 58 7 1 1505 200767861 200769351 0.000000e+00 2335.0
7 TraesCS1B01G343600 chrUn 94.555 1157 42 8 357 1510 391165778 391166916 0.000000e+00 1768.0
8 TraesCS1B01G343600 chrUn 96.491 855 27 3 1 853 422718000 422718853 0.000000e+00 1410.0
9 TraesCS1B01G343600 chrUn 93.967 779 30 5 728 1505 200668682 200667920 0.000000e+00 1162.0
10 TraesCS1B01G343600 chrUn 79.512 205 29 9 1922 2116 307510785 307510986 1.540000e-27 134.0
11 TraesCS1B01G343600 chrUn 79.512 205 29 9 1922 2116 311806372 311806573 1.540000e-27 134.0
12 TraesCS1B01G343600 chrUn 79.227 207 27 10 1922 2116 64876872 64877074 2.000000e-26 130.0
13 TraesCS1B01G343600 chrUn 78.261 207 29 11 1922 2116 64871265 64871467 4.330000e-23 119.0
14 TraesCS1B01G343600 chrUn 80.117 171 21 12 1955 2116 477194547 477194381 5.600000e-22 115.0
15 TraesCS1B01G343600 chrUn 77.670 206 32 10 1922 2116 377962536 377962738 2.010000e-21 113.0
16 TraesCS1B01G343600 chrUn 77.670 206 32 10 1922 2116 444131617 444131415 2.010000e-21 113.0
17 TraesCS1B01G343600 chrUn 86.316 95 7 5 2026 2116 380512827 380512735 5.640000e-17 99.0
18 TraesCS1B01G343600 chrUn 76.410 195 34 11 1921 2109 174755483 174755671 7.290000e-16 95.3
19 TraesCS1B01G343600 chr6B 95.093 1508 54 13 1 1505 8697073 8698563 0.000000e+00 2357.0
20 TraesCS1B01G343600 chr6B 95.027 1508 55 13 1 1505 8731328 8732818 0.000000e+00 2351.0
21 TraesCS1B01G343600 chr6B 94.960 1508 56 13 1 1505 8710205 8711695 0.000000e+00 2346.0
22 TraesCS1B01G343600 chr6B 94.960 1508 56 7 1 1505 8759881 8761371 0.000000e+00 2346.0
23 TraesCS1B01G343600 chr6B 94.957 1507 56 15 1 1504 8638581 8640070 0.000000e+00 2344.0
24 TraesCS1B01G343600 chr6B 94.828 1508 58 7 1 1505 8667638 8669128 0.000000e+00 2335.0
25 TraesCS1B01G343600 chr6B 93.739 1150 46 9 355 1502 426767084 426765959 0.000000e+00 1701.0
26 TraesCS1B01G343600 chr2B 80.784 536 86 14 1928 2456 19982909 19982384 1.070000e-108 403.0
27 TraesCS1B01G343600 chr2B 81.788 302 39 14 1922 2212 258624372 258624668 3.180000e-59 239.0
28 TraesCS1B01G343600 chr3D 82.333 300 37 12 1922 2210 345436364 345436658 1.900000e-61 246.0
29 TraesCS1B01G343600 chr3D 78.378 296 47 14 1922 2205 262595184 262595474 2.530000e-40 176.0
30 TraesCS1B01G343600 chr4D 81.373 306 40 15 1924 2218 381079927 381079628 1.480000e-57 233.0
31 TraesCS1B01G343600 chr4D 79.739 306 50 10 1922 2218 318293015 318293317 6.940000e-51 211.0
32 TraesCS1B01G343600 chr4D 79.016 305 46 12 1928 2218 329652718 329652418 2.510000e-45 193.0
33 TraesCS1B01G343600 chr4D 79.930 284 40 15 1936 2209 420147186 420147462 2.510000e-45 193.0
34 TraesCS1B01G343600 chr4D 79.087 263 40 12 1928 2181 356524962 356524706 1.520000e-37 167.0
35 TraesCS1B01G343600 chr4D 75.415 301 54 17 1922 2212 508143374 508143084 7.190000e-26 128.0
36 TraesCS1B01G343600 chr7B 81.126 302 39 16 1931 2219 361144290 361144586 2.480000e-55 226.0
37 TraesCS1B01G343600 chr6A 80.602 299 39 16 1930 2215 269698558 269698850 1.930000e-51 213.0
38 TraesCS1B01G343600 chr6A 79.422 277 34 15 1922 2186 242149548 242149283 9.100000e-40 174.0
39 TraesCS1B01G343600 chr5D 80.068 296 49 9 1921 2212 242985226 242985515 6.940000e-51 211.0
40 TraesCS1B01G343600 chr7D 74.954 547 91 29 1922 2456 633246122 633245610 2.500000e-50 209.0
41 TraesCS1B01G343600 chr5B 79.402 301 50 11 1923 2215 695746573 695746869 4.180000e-48 202.0
42 TraesCS1B01G343600 chr2D 79.153 307 46 16 1922 2218 470431097 470430799 1.940000e-46 196.0
43 TraesCS1B01G343600 chr2D 82.128 235 30 10 1922 2149 445381332 445381561 9.040000e-45 191.0
44 TraesCS1B01G343600 chr2D 78.033 305 39 20 1923 2209 596768699 596768993 1.520000e-37 167.0
45 TraesCS1B01G343600 chr2D 78.092 283 39 20 1923 2193 260432613 260432884 9.170000e-35 158.0
46 TraesCS1B01G343600 chr6D 79.195 298 46 14 1923 2209 208944224 208944516 2.510000e-45 193.0
47 TraesCS1B01G343600 chr6D 82.589 224 26 12 2024 2239 328632376 328632594 4.210000e-43 185.0
48 TraesCS1B01G343600 chr6D 82.126 207 21 13 1922 2116 163651771 163651973 1.970000e-36 163.0
49 TraesCS1B01G343600 chr6D 82.126 207 21 12 1922 2116 244886488 244886690 1.970000e-36 163.0
50 TraesCS1B01G343600 chr6D 82.039 206 21 12 1923 2116 214606996 214606795 7.090000e-36 161.0
51 TraesCS1B01G343600 chr6D 81.863 204 23 11 1922 2116 146015563 146015365 2.550000e-35 159.0
52 TraesCS1B01G343600 chr6D 81.643 207 22 12 1922 2116 199125375 199125173 9.170000e-35 158.0
53 TraesCS1B01G343600 chr6D 81.068 206 23 12 1923 2116 163644890 163645091 1.530000e-32 150.0
54 TraesCS1B01G343600 chr6D 81.481 189 21 8 1933 2109 180270590 180270404 2.570000e-30 143.0
55 TraesCS1B01G343600 chr6D 78.723 235 25 19 1922 2138 235537202 235536975 1.540000e-27 134.0
56 TraesCS1B01G343600 chr6D 75.421 297 50 17 1923 2205 116735268 116735555 3.340000e-24 122.0
57 TraesCS1B01G343600 chr1A 82.439 205 22 10 1923 2116 101678640 101678439 1.520000e-37 167.0
58 TraesCS1B01G343600 chr1A 84.663 163 18 7 2058 2215 99208109 99208269 3.300000e-34 156.0
59 TraesCS1B01G343600 chr4B 78.947 190 31 8 2063 2246 90962914 90963100 1.200000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G343600 chr1B 572208280 572210755 2475 False 4573.0 4573 100.000 1 2476 1 chr1B.!!$F1 2475
1 TraesCS1B01G343600 chrUn 260962686 260964175 1489 False 2372.0 2372 95.292 1 1505 1 chrUn.!!$F7 1504
2 TraesCS1B01G343600 chrUn 200779675 200781165 1490 False 2362.0 2362 95.159 1 1505 1 chrUn.!!$F6 1504
3 TraesCS1B01G343600 chrUn 234323348 234324838 1490 True 2357.0 2357 95.093 1 1505 1 chrUn.!!$R1 1504
4 TraesCS1B01G343600 chrUn 200754740 200756234 1494 False 2342.0 2342 94.845 1 1510 1 chrUn.!!$F4 1509
5 TraesCS1B01G343600 chrUn 200767861 200769351 1490 False 2335.0 2335 94.828 1 1505 1 chrUn.!!$F5 1504
6 TraesCS1B01G343600 chrUn 391165778 391166916 1138 False 1768.0 1768 94.555 357 1510 1 chrUn.!!$F11 1153
7 TraesCS1B01G343600 chrUn 200667920 200673514 5594 True 1756.5 2351 94.497 1 1505 2 chrUn.!!$R5 1504
8 TraesCS1B01G343600 chrUn 422718000 422718853 853 False 1410.0 1410 96.491 1 853 1 chrUn.!!$F12 852
9 TraesCS1B01G343600 chr6B 8697073 8698563 1490 False 2357.0 2357 95.093 1 1505 1 chr6B.!!$F3 1504
10 TraesCS1B01G343600 chr6B 8731328 8732818 1490 False 2351.0 2351 95.027 1 1505 1 chr6B.!!$F5 1504
11 TraesCS1B01G343600 chr6B 8710205 8711695 1490 False 2346.0 2346 94.960 1 1505 1 chr6B.!!$F4 1504
12 TraesCS1B01G343600 chr6B 8759881 8761371 1490 False 2346.0 2346 94.960 1 1505 1 chr6B.!!$F6 1504
13 TraesCS1B01G343600 chr6B 8638581 8640070 1489 False 2344.0 2344 94.957 1 1504 1 chr6B.!!$F1 1503
14 TraesCS1B01G343600 chr6B 8667638 8669128 1490 False 2335.0 2335 94.828 1 1505 1 chr6B.!!$F2 1504
15 TraesCS1B01G343600 chr6B 426765959 426767084 1125 True 1701.0 1701 93.739 355 1502 1 chr6B.!!$R1 1147
16 TraesCS1B01G343600 chr2B 19982384 19982909 525 True 403.0 403 80.784 1928 2456 1 chr2B.!!$R1 528
17 TraesCS1B01G343600 chr7D 633245610 633246122 512 True 209.0 209 74.954 1922 2456 1 chr7D.!!$R1 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
307 308 0.527113 TTGTGGCCAATTGATGCTCG 59.473 50.0 7.24 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1582 5692 0.036577 AGCAAGCTCTCGCATCTTGT 60.037 50.0 5.63 0.0 39.36 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
135 136 5.185249 GGCTATATATGGAGAGTCGGAACAA 59.815 44.000 0.00 0.00 0.00 2.83
148 149 6.595716 AGAGTCGGAACAAGAGAAAATATTGG 59.404 38.462 0.00 0.00 34.29 3.16
170 171 4.270834 GCATATGGAGAGATGCATGGATT 58.729 43.478 2.46 0.00 44.72 3.01
181 182 4.712829 AGATGCATGGATTCCAAATTGTGA 59.287 37.500 9.98 0.00 36.95 3.58
224 225 1.081174 AGAAGGGGGAATCTCCTGACA 59.919 52.381 0.00 0.00 36.57 3.58
236 237 6.432472 GGAATCTCCTGACAAAAGTTTCTGAT 59.568 38.462 0.00 0.00 32.53 2.90
254 255 6.312141 TCTGATCTTATTGACCCAATCACA 57.688 37.500 0.00 0.00 36.92 3.58
305 306 1.972795 ACTTTGTGGCCAATTGATGCT 59.027 42.857 7.24 0.00 0.00 3.79
306 307 2.028748 ACTTTGTGGCCAATTGATGCTC 60.029 45.455 7.24 0.00 0.00 4.26
307 308 0.527113 TTGTGGCCAATTGATGCTCG 59.473 50.000 7.24 0.00 0.00 5.03
325 326 3.579534 TCGTAGAGTCCTAGCAATCCT 57.420 47.619 0.00 0.00 0.00 3.24
368 369 4.130118 CGGACTTTATTGCTTGGAGCTAT 58.870 43.478 1.29 2.08 42.97 2.97
369 370 5.069914 TCGGACTTTATTGCTTGGAGCTATA 59.930 40.000 1.29 1.12 42.97 1.31
370 371 5.177696 CGGACTTTATTGCTTGGAGCTATAC 59.822 44.000 4.07 0.00 42.97 1.47
374 377 8.525290 ACTTTATTGCTTGGAGCTATACAAAT 57.475 30.769 4.07 0.00 42.97 2.32
514 517 0.738975 GGAAATTAGCTTGTCCGGCC 59.261 55.000 0.00 0.00 0.00 6.13
608 611 7.895759 ACACATAAAAACTCAGCCAATATGTT 58.104 30.769 0.00 0.00 31.98 2.71
622 625 5.345702 CCAATATGTTCAGCATGTTTGGAG 58.654 41.667 10.70 0.00 45.33 3.86
767 770 8.260818 CAGTCCTTGAATTCTTACTCCTTATGA 58.739 37.037 7.05 0.00 0.00 2.15
841 844 5.869344 CGCTATAGCTGCTTGGTATTTATGA 59.131 40.000 21.98 0.00 39.70 2.15
853 856 9.236006 GCTTGGTATTTATGATGGAATAGACAT 57.764 33.333 0.00 0.00 0.00 3.06
864 867 8.439964 TGATGGAATAGACATGATGGAATAGA 57.560 34.615 0.00 0.00 0.00 1.98
865 868 8.316946 TGATGGAATAGACATGATGGAATAGAC 58.683 37.037 0.00 0.00 0.00 2.59
866 869 6.691508 TGGAATAGACATGATGGAATAGACG 58.308 40.000 0.00 0.00 0.00 4.18
870 873 5.207110 AGACATGATGGAATAGACGGAAG 57.793 43.478 0.00 0.00 0.00 3.46
876 4983 4.278669 TGATGGAATAGACGGAAGCTAGTC 59.721 45.833 8.37 8.37 35.57 2.59
882 4989 2.672098 AGACGGAAGCTAGTCCATGAT 58.328 47.619 5.31 0.00 37.56 2.45
1042 5149 7.339976 TGAATGTGGATGCTTCTTTTGATCATA 59.660 33.333 0.00 0.00 0.00 2.15
1047 5154 8.358148 GTGGATGCTTCTTTTGATCATAATCAT 58.642 33.333 0.00 0.32 41.49 2.45
1060 5167 5.529581 TCATAATCATCTACGAGGCACAA 57.470 39.130 0.00 0.00 0.00 3.33
1177 5284 2.751816 GCCCTCAGGTTTGGTTTACTGT 60.752 50.000 0.00 0.00 34.57 3.55
1270 5378 2.716017 GGTGAGAGTCTGCGGGAGG 61.716 68.421 0.00 0.00 0.00 4.30
1293 5401 2.671070 GCGGCGACAATTTTTGAGGATT 60.671 45.455 12.98 0.00 0.00 3.01
1294 5402 2.916716 CGGCGACAATTTTTGAGGATTG 59.083 45.455 0.00 0.00 38.79 2.67
1429 5539 2.443255 GGATAGAGGAGCCCATGGAAAA 59.557 50.000 15.22 0.00 0.00 2.29
1459 5569 8.953313 TGTAACTCTTCTGATAGACGATGTAAA 58.047 33.333 0.00 0.00 0.00 2.01
1460 5570 9.953697 GTAACTCTTCTGATAGACGATGTAAAT 57.046 33.333 0.00 0.00 0.00 1.40
1530 5640 6.885735 AACAACACAAGTTATGTTTCAAGC 57.114 33.333 0.00 0.00 41.46 4.01
1531 5641 5.960113 ACAACACAAGTTATGTTTCAAGCA 58.040 33.333 0.00 0.00 41.46 3.91
1532 5642 5.804979 ACAACACAAGTTATGTTTCAAGCAC 59.195 36.000 0.00 0.00 41.46 4.40
1533 5643 5.574891 ACACAAGTTATGTTTCAAGCACA 57.425 34.783 0.00 0.00 41.46 4.57
1534 5644 5.960113 ACACAAGTTATGTTTCAAGCACAA 58.040 33.333 0.00 0.00 41.46 3.33
1535 5645 6.393990 ACACAAGTTATGTTTCAAGCACAAA 58.606 32.000 0.00 0.00 41.46 2.83
1536 5646 7.041107 ACACAAGTTATGTTTCAAGCACAAAT 58.959 30.769 0.00 0.00 41.46 2.32
1537 5647 7.548780 ACACAAGTTATGTTTCAAGCACAAATT 59.451 29.630 0.00 0.00 41.46 1.82
1538 5648 9.029243 CACAAGTTATGTTTCAAGCACAAATTA 57.971 29.630 0.00 0.00 41.46 1.40
1539 5649 9.593134 ACAAGTTATGTTTCAAGCACAAATTAA 57.407 25.926 0.00 0.00 40.06 1.40
1542 5652 9.040939 AGTTATGTTTCAAGCACAAATTAAACC 57.959 29.630 0.00 0.00 0.00 3.27
1543 5653 8.821894 GTTATGTTTCAAGCACAAATTAAACCA 58.178 29.630 0.00 0.00 0.00 3.67
1544 5654 9.553064 TTATGTTTCAAGCACAAATTAAACCAT 57.447 25.926 0.00 0.00 0.00 3.55
1546 5656 8.586570 TGTTTCAAGCACAAATTAAACCATAG 57.413 30.769 0.00 0.00 0.00 2.23
1547 5657 7.655328 TGTTTCAAGCACAAATTAAACCATAGG 59.345 33.333 0.00 0.00 0.00 2.57
1548 5658 6.909550 TCAAGCACAAATTAAACCATAGGT 57.090 33.333 0.00 0.00 37.65 3.08
1549 5659 8.410673 TTCAAGCACAAATTAAACCATAGGTA 57.589 30.769 0.00 0.00 33.12 3.08
1550 5660 8.588290 TCAAGCACAAATTAAACCATAGGTAT 57.412 30.769 0.00 0.00 33.12 2.73
1551 5661 8.682710 TCAAGCACAAATTAAACCATAGGTATC 58.317 33.333 0.00 0.00 33.12 2.24
1552 5662 8.686334 CAAGCACAAATTAAACCATAGGTATCT 58.314 33.333 0.00 0.00 33.12 1.98
1553 5663 8.823220 AGCACAAATTAAACCATAGGTATCTT 57.177 30.769 0.00 0.00 33.12 2.40
1554 5664 9.255029 AGCACAAATTAAACCATAGGTATCTTT 57.745 29.630 0.00 0.00 33.12 2.52
1555 5665 9.301153 GCACAAATTAAACCATAGGTATCTTTG 57.699 33.333 0.00 0.00 33.12 2.77
1562 5672 7.611213 AAACCATAGGTATCTTTGAAACTCG 57.389 36.000 0.00 0.00 33.12 4.18
1563 5673 5.671493 ACCATAGGTATCTTTGAAACTCGG 58.329 41.667 0.00 0.00 32.11 4.63
1564 5674 4.511826 CCATAGGTATCTTTGAAACTCGGC 59.488 45.833 0.00 0.00 0.00 5.54
1565 5675 3.983044 AGGTATCTTTGAAACTCGGCT 57.017 42.857 0.00 0.00 0.00 5.52
1566 5676 4.287766 AGGTATCTTTGAAACTCGGCTT 57.712 40.909 0.00 0.00 0.00 4.35
1567 5677 5.416271 AGGTATCTTTGAAACTCGGCTTA 57.584 39.130 0.00 0.00 0.00 3.09
1568 5678 5.801380 AGGTATCTTTGAAACTCGGCTTAA 58.199 37.500 0.00 0.00 0.00 1.85
1569 5679 6.415573 AGGTATCTTTGAAACTCGGCTTAAT 58.584 36.000 0.00 0.00 0.00 1.40
1570 5680 7.562135 AGGTATCTTTGAAACTCGGCTTAATA 58.438 34.615 0.00 0.00 0.00 0.98
1571 5681 8.044908 AGGTATCTTTGAAACTCGGCTTAATAA 58.955 33.333 0.00 0.00 0.00 1.40
1572 5682 8.336080 GGTATCTTTGAAACTCGGCTTAATAAG 58.664 37.037 0.00 0.00 0.00 1.73
1573 5683 9.095065 GTATCTTTGAAACTCGGCTTAATAAGA 57.905 33.333 3.88 0.00 0.00 2.10
1574 5684 8.738645 ATCTTTGAAACTCGGCTTAATAAGAT 57.261 30.769 3.88 0.00 0.00 2.40
1575 5685 8.197988 TCTTTGAAACTCGGCTTAATAAGATC 57.802 34.615 3.88 0.00 0.00 2.75
1576 5686 8.041323 TCTTTGAAACTCGGCTTAATAAGATCT 58.959 33.333 3.88 0.00 0.00 2.75
1577 5687 7.539712 TTGAAACTCGGCTTAATAAGATCTG 57.460 36.000 3.88 0.00 0.00 2.90
1578 5688 6.873997 TGAAACTCGGCTTAATAAGATCTGA 58.126 36.000 3.88 0.00 0.00 3.27
1579 5689 6.757010 TGAAACTCGGCTTAATAAGATCTGAC 59.243 38.462 3.88 0.00 0.00 3.51
1580 5690 5.854010 ACTCGGCTTAATAAGATCTGACA 57.146 39.130 3.88 0.00 0.00 3.58
1581 5691 5.837437 ACTCGGCTTAATAAGATCTGACAG 58.163 41.667 3.88 0.00 0.00 3.51
1582 5692 5.594725 ACTCGGCTTAATAAGATCTGACAGA 59.405 40.000 7.80 7.80 0.00 3.41
1583 5693 5.833082 TCGGCTTAATAAGATCTGACAGAC 58.167 41.667 7.47 2.21 0.00 3.51
1584 5694 5.359860 TCGGCTTAATAAGATCTGACAGACA 59.640 40.000 7.47 0.00 0.00 3.41
1585 5695 6.042777 CGGCTTAATAAGATCTGACAGACAA 58.957 40.000 7.47 0.00 0.00 3.18
1586 5696 6.199908 CGGCTTAATAAGATCTGACAGACAAG 59.800 42.308 7.47 4.40 0.00 3.16
1587 5697 7.268586 GGCTTAATAAGATCTGACAGACAAGA 58.731 38.462 7.47 0.00 0.00 3.02
1588 5698 7.930865 GGCTTAATAAGATCTGACAGACAAGAT 59.069 37.037 7.47 0.00 0.00 2.40
1589 5699 8.763356 GCTTAATAAGATCTGACAGACAAGATG 58.237 37.037 7.47 0.00 0.00 2.90
1590 5700 8.654230 TTAATAAGATCTGACAGACAAGATGC 57.346 34.615 7.47 0.00 0.00 3.91
1591 5701 3.162202 AGATCTGACAGACAAGATGCG 57.838 47.619 7.47 0.00 0.00 4.73
1592 5702 2.757314 AGATCTGACAGACAAGATGCGA 59.243 45.455 7.47 0.00 0.00 5.10
1593 5703 2.643933 TCTGACAGACAAGATGCGAG 57.356 50.000 0.00 0.00 0.00 5.03
1594 5704 2.162681 TCTGACAGACAAGATGCGAGA 58.837 47.619 0.00 0.00 0.00 4.04
1595 5705 2.163211 TCTGACAGACAAGATGCGAGAG 59.837 50.000 0.00 0.00 0.00 3.20
1633 5743 9.975218 AGTTATTGGTAACTAATGGTGAAGAAT 57.025 29.630 0.00 0.00 46.60 2.40
1636 5746 8.877864 ATTGGTAACTAATGGTGAAGAATTGA 57.122 30.769 0.00 0.00 37.61 2.57
1637 5747 8.877864 TTGGTAACTAATGGTGAAGAATTGAT 57.122 30.769 0.00 0.00 37.61 2.57
1638 5748 9.967451 TTGGTAACTAATGGTGAAGAATTGATA 57.033 29.630 0.00 0.00 37.61 2.15
1682 5792 8.521170 AGTGTATTAGTACTGACTTGATAGCA 57.479 34.615 5.39 0.00 37.10 3.49
1683 5793 8.967918 AGTGTATTAGTACTGACTTGATAGCAA 58.032 33.333 5.39 0.00 37.10 3.91
1684 5794 9.751542 GTGTATTAGTACTGACTTGATAGCAAT 57.248 33.333 5.39 0.00 37.10 3.56
1689 5799 7.778470 AGTACTGACTTGATAGCAATTAAGC 57.222 36.000 0.00 0.00 33.15 3.09
1690 5800 7.331026 AGTACTGACTTGATAGCAATTAAGCA 58.669 34.615 0.00 0.00 33.15 3.91
1691 5801 7.824289 AGTACTGACTTGATAGCAATTAAGCAA 59.176 33.333 0.00 0.00 33.15 3.91
1692 5802 6.846350 ACTGACTTGATAGCAATTAAGCAAC 58.154 36.000 0.00 0.00 33.15 4.17
1693 5803 6.430925 ACTGACTTGATAGCAATTAAGCAACA 59.569 34.615 0.00 0.00 33.15 3.33
1694 5804 6.611381 TGACTTGATAGCAATTAAGCAACAC 58.389 36.000 0.00 0.00 33.15 3.32
1695 5805 6.206438 TGACTTGATAGCAATTAAGCAACACA 59.794 34.615 0.00 0.00 33.15 3.72
1696 5806 6.615088 ACTTGATAGCAATTAAGCAACACAG 58.385 36.000 0.00 0.00 33.15 3.66
1697 5807 5.565592 TGATAGCAATTAAGCAACACAGG 57.434 39.130 0.00 0.00 36.85 4.00
1698 5808 5.009631 TGATAGCAATTAAGCAACACAGGT 58.990 37.500 0.00 0.00 36.85 4.00
1699 5809 5.476599 TGATAGCAATTAAGCAACACAGGTT 59.523 36.000 0.00 0.00 37.87 3.50
1712 5822 5.461032 AACACAGGTTGACTTTCAAACAA 57.539 34.783 6.72 0.00 46.12 2.83
1713 5823 5.461032 ACACAGGTTGACTTTCAAACAAA 57.539 34.783 6.72 0.00 46.12 2.83
1714 5824 5.848406 ACACAGGTTGACTTTCAAACAAAA 58.152 33.333 6.72 0.00 46.12 2.44
1715 5825 6.284459 ACACAGGTTGACTTTCAAACAAAAA 58.716 32.000 6.72 0.00 46.12 1.94
1740 5850 9.682465 AAATTAACCTTAGGGTATCTTTCAGAC 57.318 33.333 2.32 0.00 46.67 3.51
1741 5851 5.695424 AACCTTAGGGTATCTTTCAGACC 57.305 43.478 2.32 0.00 46.67 3.85
1748 5858 4.553330 GGTATCTTTCAGACCCAACAGA 57.447 45.455 0.00 0.00 0.00 3.41
1749 5859 5.104259 GGTATCTTTCAGACCCAACAGAT 57.896 43.478 0.00 0.00 0.00 2.90
1750 5860 5.119694 GGTATCTTTCAGACCCAACAGATC 58.880 45.833 0.00 0.00 0.00 2.75
1751 5861 5.104735 GGTATCTTTCAGACCCAACAGATCT 60.105 44.000 0.00 0.00 0.00 2.75
1752 5862 4.277515 TCTTTCAGACCCAACAGATCTG 57.722 45.455 21.37 21.37 41.06 2.90
1754 5864 4.838423 TCTTTCAGACCCAACAGATCTGTA 59.162 41.667 28.10 7.69 44.13 2.74
1755 5865 5.485353 TCTTTCAGACCCAACAGATCTGTAT 59.515 40.000 28.10 15.38 44.13 2.29
1756 5866 5.344743 TTCAGACCCAACAGATCTGTATC 57.655 43.478 28.10 20.91 44.13 2.24
1757 5867 4.352893 TCAGACCCAACAGATCTGTATCA 58.647 43.478 28.10 6.95 44.13 2.15
1758 5868 4.777366 TCAGACCCAACAGATCTGTATCAA 59.223 41.667 28.10 12.55 44.13 2.57
1759 5869 5.248248 TCAGACCCAACAGATCTGTATCAAA 59.752 40.000 28.10 12.26 44.13 2.69
1760 5870 5.352569 CAGACCCAACAGATCTGTATCAAAC 59.647 44.000 28.10 16.94 44.13 2.93
1761 5871 5.013079 AGACCCAACAGATCTGTATCAAACA 59.987 40.000 28.10 0.00 44.13 2.83
1762 5872 5.003804 ACCCAACAGATCTGTATCAAACAC 58.996 41.667 28.10 0.00 44.13 3.32
1763 5873 5.003160 CCCAACAGATCTGTATCAAACACA 58.997 41.667 28.10 0.00 44.13 3.72
1764 5874 5.106555 CCCAACAGATCTGTATCAAACACAC 60.107 44.000 28.10 0.00 44.13 3.82
1765 5875 5.469760 CCAACAGATCTGTATCAAACACACA 59.530 40.000 28.10 0.00 44.13 3.72
1766 5876 6.017192 CCAACAGATCTGTATCAAACACACAA 60.017 38.462 28.10 0.00 44.13 3.33
1767 5877 6.545504 ACAGATCTGTATCAAACACACAAC 57.454 37.500 26.87 0.00 42.90 3.32
1768 5878 6.054941 ACAGATCTGTATCAAACACACAACA 58.945 36.000 26.87 0.00 42.90 3.33
1769 5879 6.712095 ACAGATCTGTATCAAACACACAACAT 59.288 34.615 26.87 0.00 42.90 2.71
1770 5880 7.019418 CAGATCTGTATCAAACACACAACATG 58.981 38.462 14.95 0.00 34.28 3.21
1771 5881 5.687770 TCTGTATCAAACACACAACATGG 57.312 39.130 0.00 0.00 33.45 3.66
1772 5882 5.129634 TCTGTATCAAACACACAACATGGT 58.870 37.500 0.00 0.00 33.45 3.55
1773 5883 6.292150 TCTGTATCAAACACACAACATGGTA 58.708 36.000 0.00 0.00 33.45 3.25
1774 5884 6.426633 TCTGTATCAAACACACAACATGGTAG 59.573 38.462 0.00 0.00 33.45 3.18
1775 5885 6.292150 TGTATCAAACACACAACATGGTAGA 58.708 36.000 0.00 0.00 31.43 2.59
1776 5886 5.947228 ATCAAACACACAACATGGTAGAG 57.053 39.130 0.00 0.00 0.00 2.43
1777 5887 5.029807 TCAAACACACAACATGGTAGAGA 57.970 39.130 0.00 0.00 0.00 3.10
1778 5888 5.620206 TCAAACACACAACATGGTAGAGAT 58.380 37.500 0.00 0.00 0.00 2.75
1779 5889 6.764379 TCAAACACACAACATGGTAGAGATA 58.236 36.000 0.00 0.00 0.00 1.98
1780 5890 6.649141 TCAAACACACAACATGGTAGAGATAC 59.351 38.462 0.00 0.00 0.00 2.24
1781 5891 5.738619 ACACACAACATGGTAGAGATACA 57.261 39.130 0.00 0.00 0.00 2.29
1782 5892 6.299805 ACACACAACATGGTAGAGATACAT 57.700 37.500 0.00 0.00 0.00 2.29
1783 5893 7.418337 ACACACAACATGGTAGAGATACATA 57.582 36.000 0.00 0.00 0.00 2.29
1784 5894 7.847096 ACACACAACATGGTAGAGATACATAA 58.153 34.615 0.00 0.00 0.00 1.90
1785 5895 8.318412 ACACACAACATGGTAGAGATACATAAA 58.682 33.333 0.00 0.00 0.00 1.40
1786 5896 9.161629 CACACAACATGGTAGAGATACATAAAA 57.838 33.333 0.00 0.00 0.00 1.52
1787 5897 9.733556 ACACAACATGGTAGAGATACATAAAAA 57.266 29.630 0.00 0.00 0.00 1.94
1810 5920 8.500753 AAAACTACATTAGACATTAATGGCGA 57.499 30.769 19.37 10.28 41.91 5.54
1811 5921 8.500753 AAACTACATTAGACATTAATGGCGAA 57.499 30.769 17.76 17.76 41.91 4.70
1812 5922 7.715265 ACTACATTAGACATTAATGGCGAAG 57.285 36.000 19.72 14.35 41.91 3.79
1813 5923 7.497595 ACTACATTAGACATTAATGGCGAAGA 58.502 34.615 19.72 8.80 41.91 2.87
1814 5924 6.604735 ACATTAGACATTAATGGCGAAGAC 57.395 37.500 19.72 3.92 41.91 3.01
1815 5925 6.349300 ACATTAGACATTAATGGCGAAGACT 58.651 36.000 19.72 3.43 41.91 3.24
1816 5926 6.823689 ACATTAGACATTAATGGCGAAGACTT 59.176 34.615 19.72 3.10 41.91 3.01
1817 5927 6.662414 TTAGACATTAATGGCGAAGACTTG 57.338 37.500 19.37 0.00 41.91 3.16
1818 5928 4.832248 AGACATTAATGGCGAAGACTTGA 58.168 39.130 19.37 0.00 41.91 3.02
1819 5929 4.631813 AGACATTAATGGCGAAGACTTGAC 59.368 41.667 19.37 0.00 41.91 3.18
1820 5930 4.579869 ACATTAATGGCGAAGACTTGACT 58.420 39.130 19.37 0.00 34.59 3.41
1821 5931 5.730550 ACATTAATGGCGAAGACTTGACTA 58.269 37.500 19.37 0.00 34.59 2.59
1822 5932 6.349300 ACATTAATGGCGAAGACTTGACTAT 58.651 36.000 19.37 0.00 34.59 2.12
1823 5933 7.497595 ACATTAATGGCGAAGACTTGACTATA 58.502 34.615 19.37 0.00 34.59 1.31
1824 5934 8.150945 ACATTAATGGCGAAGACTTGACTATAT 58.849 33.333 19.37 0.00 34.59 0.86
1825 5935 8.993121 CATTAATGGCGAAGACTTGACTATATT 58.007 33.333 7.62 0.00 34.59 1.28
1826 5936 8.958119 TTAATGGCGAAGACTTGACTATATTT 57.042 30.769 0.00 0.00 34.59 1.40
1827 5937 7.484035 AATGGCGAAGACTTGACTATATTTC 57.516 36.000 0.00 0.00 34.59 2.17
1828 5938 5.972935 TGGCGAAGACTTGACTATATTTCA 58.027 37.500 0.00 0.00 34.59 2.69
1829 5939 6.042777 TGGCGAAGACTTGACTATATTTCAG 58.957 40.000 0.00 0.00 34.59 3.02
1830 5940 6.043411 GGCGAAGACTTGACTATATTTCAGT 58.957 40.000 0.00 0.00 0.00 3.41
1831 5941 6.019479 GGCGAAGACTTGACTATATTTCAGTG 60.019 42.308 0.00 0.00 0.00 3.66
1832 5942 6.531948 GCGAAGACTTGACTATATTTCAGTGT 59.468 38.462 0.00 0.00 0.00 3.55
1833 5943 7.701078 GCGAAGACTTGACTATATTTCAGTGTA 59.299 37.037 0.00 0.00 0.00 2.90
1834 5944 9.737427 CGAAGACTTGACTATATTTCAGTGTAT 57.263 33.333 0.00 0.00 0.00 2.29
1849 5959 7.801716 TTCAGTGTATTATTATTCCAGTGGC 57.198 36.000 3.51 0.00 0.00 5.01
1850 5960 6.894682 TCAGTGTATTATTATTCCAGTGGCA 58.105 36.000 3.51 0.00 0.00 4.92
1851 5961 7.342581 TCAGTGTATTATTATTCCAGTGGCAA 58.657 34.615 3.51 0.01 0.00 4.52
1852 5962 7.998383 TCAGTGTATTATTATTCCAGTGGCAAT 59.002 33.333 3.51 8.06 0.00 3.56
1853 5963 9.283768 CAGTGTATTATTATTCCAGTGGCAATA 57.716 33.333 3.51 7.08 0.00 1.90
1854 5964 9.860650 AGTGTATTATTATTCCAGTGGCAATAA 57.139 29.630 19.98 19.98 0.00 1.40
1863 5973 9.646427 TTATTCCAGTGGCAATAAATTAAACAC 57.354 29.630 17.42 0.00 0.00 3.32
1864 5974 6.031751 TCCAGTGGCAATAAATTAAACACC 57.968 37.500 3.51 0.00 0.00 4.16
1865 5975 5.540337 TCCAGTGGCAATAAATTAAACACCA 59.460 36.000 3.51 0.00 0.00 4.17
1866 5976 6.212388 TCCAGTGGCAATAAATTAAACACCAT 59.788 34.615 3.51 0.00 0.00 3.55
1867 5977 7.397476 TCCAGTGGCAATAAATTAAACACCATA 59.603 33.333 3.51 0.00 0.00 2.74
1868 5978 8.037758 CCAGTGGCAATAAATTAAACACCATAA 58.962 33.333 0.00 0.00 0.00 1.90
1869 5979 9.086336 CAGTGGCAATAAATTAAACACCATAAG 57.914 33.333 0.00 0.00 0.00 1.73
1870 5980 7.763985 AGTGGCAATAAATTAAACACCATAAGC 59.236 33.333 0.00 0.00 0.00 3.09
1871 5981 7.763985 GTGGCAATAAATTAAACACCATAAGCT 59.236 33.333 0.00 0.00 0.00 3.74
1872 5982 7.763528 TGGCAATAAATTAAACACCATAAGCTG 59.236 33.333 0.00 0.00 0.00 4.24
1873 5983 7.978975 GGCAATAAATTAAACACCATAAGCTGA 59.021 33.333 0.00 0.00 0.00 4.26
1874 5984 8.807581 GCAATAAATTAAACACCATAAGCTGAC 58.192 33.333 0.00 0.00 0.00 3.51
1878 5988 8.816640 AAATTAAACACCATAAGCTGACTTTG 57.183 30.769 0.00 0.00 37.33 2.77
1879 5989 7.759489 ATTAAACACCATAAGCTGACTTTGA 57.241 32.000 0.00 0.00 37.33 2.69
1880 5990 7.759489 TTAAACACCATAAGCTGACTTTGAT 57.241 32.000 0.00 0.00 37.33 2.57
1881 5991 5.886960 AACACCATAAGCTGACTTTGATC 57.113 39.130 0.00 0.00 37.33 2.92
1882 5992 4.910195 ACACCATAAGCTGACTTTGATCA 58.090 39.130 0.00 0.00 37.33 2.92
1883 5993 5.503927 ACACCATAAGCTGACTTTGATCAT 58.496 37.500 0.00 0.00 37.33 2.45
1884 5994 5.948162 ACACCATAAGCTGACTTTGATCATT 59.052 36.000 0.00 0.00 37.33 2.57
1885 5995 6.127814 ACACCATAAGCTGACTTTGATCATTG 60.128 38.462 0.00 0.00 37.33 2.82
1886 5996 6.094464 CACCATAAGCTGACTTTGATCATTGA 59.906 38.462 0.00 0.00 37.33 2.57
1887 5997 6.660521 ACCATAAGCTGACTTTGATCATTGAA 59.339 34.615 0.00 0.00 37.33 2.69
1888 5998 7.148120 ACCATAAGCTGACTTTGATCATTGAAG 60.148 37.037 0.00 0.00 37.33 3.02
1889 5999 7.066645 CCATAAGCTGACTTTGATCATTGAAGA 59.933 37.037 11.68 0.00 37.33 2.87
1890 6000 6.497785 AAGCTGACTTTGATCATTGAAGAG 57.502 37.500 11.68 2.40 29.41 2.85
1891 6001 5.802465 AGCTGACTTTGATCATTGAAGAGA 58.198 37.500 11.68 0.00 0.00 3.10
1892 6002 6.236409 AGCTGACTTTGATCATTGAAGAGAA 58.764 36.000 11.68 0.00 0.00 2.87
1893 6003 6.149142 AGCTGACTTTGATCATTGAAGAGAAC 59.851 38.462 11.68 0.91 0.00 3.01
1894 6004 6.072838 GCTGACTTTGATCATTGAAGAGAACA 60.073 38.462 11.68 6.21 0.00 3.18
1895 6005 7.521099 GCTGACTTTGATCATTGAAGAGAACAA 60.521 37.037 11.68 0.00 0.00 2.83
1896 6006 7.868775 TGACTTTGATCATTGAAGAGAACAAG 58.131 34.615 11.68 3.76 0.00 3.16
1897 6007 7.040892 TGACTTTGATCATTGAAGAGAACAAGG 60.041 37.037 11.68 0.00 0.00 3.61
1898 6008 7.000472 ACTTTGATCATTGAAGAGAACAAGGA 59.000 34.615 11.68 0.00 41.06 3.36
1899 6009 7.668886 ACTTTGATCATTGAAGAGAACAAGGAT 59.331 33.333 11.68 0.00 46.37 3.24
1900 6010 6.997239 TGATCATTGAAGAGAACAAGGATG 57.003 37.500 11.40 0.00 44.68 3.51
1901 6011 6.714278 TGATCATTGAAGAGAACAAGGATGA 58.286 36.000 11.40 2.27 44.68 2.92
1902 6012 7.170277 TGATCATTGAAGAGAACAAGGATGAA 58.830 34.615 11.40 0.00 44.68 2.57
1903 6013 7.666804 TGATCATTGAAGAGAACAAGGATGAAA 59.333 33.333 11.40 0.00 44.68 2.69
1904 6014 7.822161 TCATTGAAGAGAACAAGGATGAAAA 57.178 32.000 0.00 0.00 34.09 2.29
1905 6015 8.236585 TCATTGAAGAGAACAAGGATGAAAAA 57.763 30.769 0.00 0.00 34.09 1.94
1906 6016 8.355169 TCATTGAAGAGAACAAGGATGAAAAAG 58.645 33.333 0.00 0.00 34.09 2.27
1907 6017 6.076981 TGAAGAGAACAAGGATGAAAAAGC 57.923 37.500 0.00 0.00 0.00 3.51
1908 6018 5.593909 TGAAGAGAACAAGGATGAAAAAGCA 59.406 36.000 0.00 0.00 0.00 3.91
1909 6019 6.096705 TGAAGAGAACAAGGATGAAAAAGCAA 59.903 34.615 0.00 0.00 0.00 3.91
1910 6020 6.661304 AGAGAACAAGGATGAAAAAGCAAT 57.339 33.333 0.00 0.00 0.00 3.56
1911 6021 7.059202 AGAGAACAAGGATGAAAAAGCAATT 57.941 32.000 0.00 0.00 0.00 2.32
1912 6022 6.927381 AGAGAACAAGGATGAAAAAGCAATTG 59.073 34.615 0.00 0.00 0.00 2.32
1913 6023 6.819284 AGAACAAGGATGAAAAAGCAATTGA 58.181 32.000 10.34 0.00 0.00 2.57
1914 6024 6.927381 AGAACAAGGATGAAAAAGCAATTGAG 59.073 34.615 10.34 0.00 0.00 3.02
1915 6025 6.409524 ACAAGGATGAAAAAGCAATTGAGA 57.590 33.333 10.34 0.00 0.00 3.27
1916 6026 6.819284 ACAAGGATGAAAAAGCAATTGAGAA 58.181 32.000 10.34 0.00 0.00 2.87
1917 6027 6.927381 ACAAGGATGAAAAAGCAATTGAGAAG 59.073 34.615 10.34 0.00 0.00 2.85
1918 6028 6.661304 AGGATGAAAAAGCAATTGAGAAGT 57.339 33.333 10.34 0.00 0.00 3.01
1919 6029 7.059202 AGGATGAAAAAGCAATTGAGAAGTT 57.941 32.000 10.34 0.00 0.00 2.66
1920 6030 7.150640 AGGATGAAAAAGCAATTGAGAAGTTC 58.849 34.615 10.34 6.07 0.00 3.01
1938 6048 7.177878 AGAAGTTCCTGTCATGGTATTTTCAT 58.822 34.615 0.00 0.00 0.00 2.57
1953 6063 3.438216 TTTCATGGCAGATGTCCTCAA 57.562 42.857 0.00 0.00 0.00 3.02
1991 6101 0.179056 CATCGGAATTGGGCGGTAGT 60.179 55.000 0.00 0.00 0.00 2.73
1994 6104 0.391927 CGGAATTGGGCGGTAGTTCA 60.392 55.000 0.00 0.00 0.00 3.18
1995 6105 1.379527 GGAATTGGGCGGTAGTTCAG 58.620 55.000 0.00 0.00 0.00 3.02
2004 6115 1.676916 GCGGTAGTTCAGGGGGTTAAC 60.677 57.143 0.00 0.00 0.00 2.01
2015 6126 0.036671 GGGGTTAACTGGACACGAGG 60.037 60.000 5.42 0.00 0.00 4.63
2016 6127 0.971386 GGGTTAACTGGACACGAGGA 59.029 55.000 5.42 0.00 0.00 3.71
2047 6158 4.410400 CCAGGTTCGGCCCCTCAC 62.410 72.222 0.00 0.00 38.26 3.51
2077 6188 3.534721 AAGCCTACGTCCTGCTTTC 57.465 52.632 11.90 0.00 42.37 2.62
2102 6213 8.296713 TCGTTGTATTGATGATGATCTCGATTA 58.703 33.333 0.00 0.00 0.00 1.75
2114 6225 1.480954 TCTCGATTACAAGGGGTGCTC 59.519 52.381 0.00 0.00 0.00 4.26
2133 6244 3.700038 GCTCTTGGCTAACCTAGTACTCA 59.300 47.826 0.00 0.00 39.55 3.41
2161 6272 5.181433 GGTTGTAACTTGATCTTTCTGACCC 59.819 44.000 0.00 0.00 0.00 4.46
2193 6304 5.731678 CCCCTTTATATATAGGTTGAGGCCT 59.268 44.000 3.86 3.86 42.43 5.19
2198 6310 0.345502 TATAGGTTGAGGCCTGGGGT 59.654 55.000 12.00 0.00 39.60 4.95
2199 6311 0.552615 ATAGGTTGAGGCCTGGGGTT 60.553 55.000 12.00 0.00 39.60 4.11
2212 6324 3.200165 GCCTGGGGTTTACAATAGAGTCT 59.800 47.826 0.00 0.00 0.00 3.24
2214 6326 4.384208 CCTGGGGTTTACAATAGAGTCTGG 60.384 50.000 1.86 0.00 0.00 3.86
2215 6327 4.431378 TGGGGTTTACAATAGAGTCTGGA 58.569 43.478 1.86 0.00 0.00 3.86
2216 6328 5.036916 TGGGGTTTACAATAGAGTCTGGAT 58.963 41.667 1.86 0.00 0.00 3.41
2218 6330 5.130477 GGGGTTTACAATAGAGTCTGGATCA 59.870 44.000 1.86 0.00 0.00 2.92
2225 6338 5.419155 ACAATAGAGTCTGGATCAGAAACGA 59.581 40.000 1.86 0.00 42.46 3.85
2231 6344 1.475280 CTGGATCAGAAACGACCCGTA 59.525 52.381 0.00 0.00 34.17 4.02
2232 6345 1.203052 TGGATCAGAAACGACCCGTAC 59.797 52.381 0.00 0.00 39.99 3.67
2235 6348 1.259609 TCAGAAACGACCCGTACCAT 58.740 50.000 0.00 0.00 39.99 3.55
2239 6352 2.424956 AGAAACGACCCGTACCATAGTC 59.575 50.000 0.00 0.00 39.99 2.59
2241 6354 3.281727 AACGACCCGTACCATAGTCTA 57.718 47.619 0.00 0.00 39.99 2.59
2247 6360 5.315348 GACCCGTACCATAGTCTATCTCTT 58.685 45.833 0.00 0.00 0.00 2.85
2250 6363 6.941436 ACCCGTACCATAGTCTATCTCTTTAG 59.059 42.308 0.00 0.00 0.00 1.85
2254 6367 7.965655 CGTACCATAGTCTATCTCTTTAGCATG 59.034 40.741 0.00 0.00 0.00 4.06
2255 6368 6.696411 ACCATAGTCTATCTCTTTAGCATGC 58.304 40.000 10.51 10.51 0.00 4.06
2259 6372 6.985653 AGTCTATCTCTTTAGCATGCCTTA 57.014 37.500 15.66 0.00 0.00 2.69
2260 6373 7.552050 AGTCTATCTCTTTAGCATGCCTTAT 57.448 36.000 15.66 0.00 0.00 1.73
2269 6382 6.708054 TCTTTAGCATGCCTTATCTTCTAAGC 59.292 38.462 15.66 0.00 0.00 3.09
2278 6391 6.719370 TGCCTTATCTTCTAAGCAAGGAAAAA 59.281 34.615 19.20 5.97 38.87 1.94
2279 6392 7.030165 GCCTTATCTTCTAAGCAAGGAAAAAC 58.970 38.462 19.20 5.25 38.87 2.43
2281 6394 8.239998 CCTTATCTTCTAAGCAAGGAAAAACTG 58.760 37.037 13.55 0.00 38.87 3.16
2284 6397 8.691661 ATCTTCTAAGCAAGGAAAAACTGTAA 57.308 30.769 0.00 0.00 0.00 2.41
2319 6432 4.715523 GCCTAAGCCGGTGCACCA 62.716 66.667 34.16 14.56 41.13 4.17
2326 6439 4.720902 CCGGTGCACCATGAGCCA 62.721 66.667 34.16 0.00 35.14 4.75
2329 6442 2.360852 GTGCACCATGAGCCAGCT 60.361 61.111 5.22 0.00 0.00 4.24
2340 6453 1.693726 TGAGCCAGCTCATCTATGGGT 60.694 52.381 18.14 0.00 46.80 4.51
2345 6461 1.142465 CAGCTCATCTATGGGTGGCTT 59.858 52.381 3.17 0.00 0.00 4.35
2351 6467 4.556697 TCATCTATGGGTGGCTTCTTCTA 58.443 43.478 0.00 0.00 0.00 2.10
2354 6470 3.961408 TCTATGGGTGGCTTCTTCTAGAC 59.039 47.826 0.00 0.00 0.00 2.59
2356 6473 0.896226 GGGTGGCTTCTTCTAGACGT 59.104 55.000 0.00 0.00 0.00 4.34
2361 6478 2.488545 TGGCTTCTTCTAGACGTGTCTC 59.511 50.000 5.66 0.00 40.93 3.36
2362 6479 2.750712 GGCTTCTTCTAGACGTGTCTCT 59.249 50.000 5.66 0.00 40.93 3.10
2364 6481 4.321378 GGCTTCTTCTAGACGTGTCTCTTT 60.321 45.833 5.66 0.00 40.93 2.52
2367 6486 6.576662 TTCTTCTAGACGTGTCTCTTTGAT 57.423 37.500 5.66 0.00 40.93 2.57
2371 6490 3.305398 AGACGTGTCTCTTTGATCACC 57.695 47.619 0.00 0.00 34.17 4.02
2400 6520 3.926003 GGCCCAGCCTTCTTAAGC 58.074 61.111 0.00 0.00 46.69 3.09
2401 6521 1.000896 GGCCCAGCCTTCTTAAGCA 60.001 57.895 0.00 0.00 46.69 3.91
2408 6528 1.074566 AGCCTTCTTAAGCAGCCACTT 59.925 47.619 0.00 0.00 0.00 3.16
2409 6529 1.470494 GCCTTCTTAAGCAGCCACTTC 59.530 52.381 0.00 0.00 0.00 3.01
2410 6530 2.783135 CCTTCTTAAGCAGCCACTTCA 58.217 47.619 0.00 0.00 0.00 3.02
2424 6544 1.987855 CTTCAGTGACCCGGCCCTA 60.988 63.158 0.00 0.00 0.00 3.53
2439 6559 1.450134 CCTAAACGGGGCGGGTTAC 60.450 63.158 0.00 0.00 0.00 2.50
2456 6576 4.850386 GGGTTACATCCTGGGGTTATATCT 59.150 45.833 0.00 0.00 0.00 1.98
2457 6577 6.027482 GGGTTACATCCTGGGGTTATATCTA 58.973 44.000 0.00 0.00 0.00 1.98
2458 6578 6.156429 GGGTTACATCCTGGGGTTATATCTAG 59.844 46.154 0.00 0.00 0.00 2.43
2459 6579 6.351966 GGTTACATCCTGGGGTTATATCTAGC 60.352 46.154 0.00 0.00 0.00 3.42
2460 6580 4.104831 ACATCCTGGGGTTATATCTAGCC 58.895 47.826 0.00 0.00 0.00 3.93
2466 6586 2.197465 GGGTTATATCTAGCCCCCAGG 58.803 57.143 0.00 0.00 41.40 4.45
2467 6587 2.496714 GGGTTATATCTAGCCCCCAGGT 60.497 54.545 0.00 0.00 41.40 4.00
2468 6588 3.257578 GGTTATATCTAGCCCCCAGGTT 58.742 50.000 0.00 0.00 34.57 3.50
2469 6589 3.009143 GGTTATATCTAGCCCCCAGGTTG 59.991 52.174 0.00 0.00 34.57 3.77
2470 6590 2.815357 ATATCTAGCCCCCAGGTTGA 57.185 50.000 0.00 0.00 34.57 3.18
2471 6591 2.815357 TATCTAGCCCCCAGGTTGAT 57.185 50.000 0.00 0.00 40.69 2.57
2472 6592 1.912862 ATCTAGCCCCCAGGTTGATT 58.087 50.000 0.00 0.00 35.33 2.57
2473 6593 1.681229 TCTAGCCCCCAGGTTGATTT 58.319 50.000 0.00 0.00 34.57 2.17
2474 6594 1.284785 TCTAGCCCCCAGGTTGATTTG 59.715 52.381 0.00 0.00 34.57 2.32
2475 6595 1.284785 CTAGCCCCCAGGTTGATTTGA 59.715 52.381 0.00 0.00 34.57 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
135 136 7.982252 TCTCTCCATATGCCAATATTTTCTCT 58.018 34.615 0.00 0.00 0.00 3.10
148 149 3.345508 TCCATGCATCTCTCCATATGC 57.654 47.619 0.00 0.00 46.92 3.14
224 225 8.477419 TTGGGTCAATAAGATCAGAAACTTTT 57.523 30.769 0.00 0.00 0.00 2.27
236 237 7.537596 ACAATTTGTGATTGGGTCAATAAGA 57.462 32.000 0.15 0.00 38.90 2.10
254 255 6.043012 TCACCAAATCTTCATCCCAACAATTT 59.957 34.615 0.00 0.00 0.00 1.82
305 306 3.118000 TCAGGATTGCTAGGACTCTACGA 60.118 47.826 1.72 0.00 0.00 3.43
306 307 3.215151 TCAGGATTGCTAGGACTCTACG 58.785 50.000 1.72 0.00 0.00 3.51
307 308 4.219725 GGATCAGGATTGCTAGGACTCTAC 59.780 50.000 1.72 0.00 0.00 2.59
320 321 8.110743 ACATATTATGCATAGGGATCAGGATT 57.889 34.615 6.50 0.00 0.00 3.01
325 326 5.660864 TCCGACATATTATGCATAGGGATCA 59.339 40.000 6.50 0.00 0.00 2.92
369 370 9.880157 ATCGTACAGTGTATAAACCTTATTTGT 57.120 29.630 6.21 0.00 0.00 2.83
399 402 4.462483 GCTTTTTCCATTCCTCCACATACA 59.538 41.667 0.00 0.00 0.00 2.29
608 611 1.304381 GCCCCTCCAAACATGCTGA 60.304 57.895 0.00 0.00 0.00 4.26
622 625 2.890766 TTTCGTGTCCTCTGGCCCC 61.891 63.158 0.00 0.00 0.00 5.80
719 722 0.904649 TCTCCTGCACGGTCAATGAT 59.095 50.000 2.68 0.00 0.00 2.45
767 770 7.456725 CCCAAGATAGGTAATTCATGATCAGT 58.543 38.462 0.09 0.00 0.00 3.41
841 844 7.326454 CGTCTATTCCATCATGTCTATTCCAT 58.674 38.462 0.00 0.00 0.00 3.41
853 856 4.215908 ACTAGCTTCCGTCTATTCCATCA 58.784 43.478 0.00 0.00 0.00 3.07
854 857 4.321378 GGACTAGCTTCCGTCTATTCCATC 60.321 50.000 0.00 0.00 36.46 3.51
855 858 3.574826 GGACTAGCTTCCGTCTATTCCAT 59.425 47.826 0.00 0.00 36.46 3.41
856 859 2.957006 GGACTAGCTTCCGTCTATTCCA 59.043 50.000 0.00 0.00 36.46 3.53
857 860 2.957006 TGGACTAGCTTCCGTCTATTCC 59.043 50.000 0.00 0.00 38.69 3.01
858 861 4.278669 TCATGGACTAGCTTCCGTCTATTC 59.721 45.833 0.00 0.00 38.69 1.75
859 862 4.215908 TCATGGACTAGCTTCCGTCTATT 58.784 43.478 0.00 0.00 38.69 1.73
860 863 3.833732 TCATGGACTAGCTTCCGTCTAT 58.166 45.455 0.00 0.00 38.69 1.98
861 864 3.292492 TCATGGACTAGCTTCCGTCTA 57.708 47.619 0.00 0.00 38.69 2.59
862 865 2.145397 TCATGGACTAGCTTCCGTCT 57.855 50.000 0.00 0.00 38.69 4.18
863 866 2.546795 CCATCATGGACTAGCTTCCGTC 60.547 54.545 0.00 0.00 40.96 4.79
864 867 1.414181 CCATCATGGACTAGCTTCCGT 59.586 52.381 0.00 0.00 40.96 4.69
865 868 1.414181 ACCATCATGGACTAGCTTCCG 59.586 52.381 11.90 0.00 40.96 4.30
866 869 4.101741 ACTTACCATCATGGACTAGCTTCC 59.898 45.833 11.90 0.00 40.96 3.46
870 873 4.342378 TGAGACTTACCATCATGGACTAGC 59.658 45.833 11.90 0.00 40.96 3.42
876 4983 3.070734 CCTCCTGAGACTTACCATCATGG 59.929 52.174 0.54 0.54 45.02 3.66
882 4989 0.251653 ACGCCTCCTGAGACTTACCA 60.252 55.000 0.00 0.00 0.00 3.25
1042 5149 2.540515 CGTTGTGCCTCGTAGATGATT 58.459 47.619 0.00 0.00 33.89 2.57
1047 5154 1.904865 ACCCGTTGTGCCTCGTAGA 60.905 57.895 0.00 0.00 0.00 2.59
1060 5167 1.557099 TCTCTGATAACAGCACCCGT 58.443 50.000 0.00 0.00 43.17 5.28
1155 5262 0.879090 GTAAACCAAACCTGAGGGCG 59.121 55.000 2.38 0.00 35.63 6.13
1194 5301 7.280652 TCTGAATTGATAATGAGACGATTGCAA 59.719 33.333 0.00 0.00 0.00 4.08
1270 5378 1.606606 CTCAAAAATTGTCGCCGCTC 58.393 50.000 0.00 0.00 0.00 5.03
1396 5506 4.754475 GCTCCTCTATCCAATCCCTAGTCA 60.754 50.000 0.00 0.00 0.00 3.41
1429 5539 7.867305 TCGTCTATCAGAAGAGTTACAAGAT 57.133 36.000 0.00 0.00 29.58 2.40
1505 5615 8.029522 TGCTTGAAACATAACTTGTGTTGTTTA 58.970 29.630 4.81 1.85 37.29 2.01
1508 5618 5.804979 GTGCTTGAAACATAACTTGTGTTGT 59.195 36.000 4.81 0.00 39.57 3.32
1509 5619 5.804473 TGTGCTTGAAACATAACTTGTGTTG 59.196 36.000 4.81 0.00 39.57 3.33
1510 5620 5.960113 TGTGCTTGAAACATAACTTGTGTT 58.040 33.333 0.00 0.00 41.28 3.32
1511 5621 5.574891 TGTGCTTGAAACATAACTTGTGT 57.425 34.783 0.00 0.00 38.99 3.72
1512 5622 6.884096 TTTGTGCTTGAAACATAACTTGTG 57.116 33.333 0.00 0.00 38.99 3.33
1513 5623 9.593134 TTAATTTGTGCTTGAAACATAACTTGT 57.407 25.926 0.00 0.00 41.53 3.16
1516 5626 9.040939 GGTTTAATTTGTGCTTGAAACATAACT 57.959 29.630 0.00 0.00 0.00 2.24
1517 5627 8.821894 TGGTTTAATTTGTGCTTGAAACATAAC 58.178 29.630 0.00 0.00 0.00 1.89
1518 5628 8.948631 TGGTTTAATTTGTGCTTGAAACATAA 57.051 26.923 0.00 0.00 0.00 1.90
1520 5630 9.206870 CTATGGTTTAATTTGTGCTTGAAACAT 57.793 29.630 0.00 0.00 34.85 2.71
1521 5631 7.655328 CCTATGGTTTAATTTGTGCTTGAAACA 59.345 33.333 0.00 0.00 0.00 2.83
1522 5632 7.655732 ACCTATGGTTTAATTTGTGCTTGAAAC 59.344 33.333 0.00 0.00 27.29 2.78
1523 5633 7.731054 ACCTATGGTTTAATTTGTGCTTGAAA 58.269 30.769 0.00 0.00 27.29 2.69
1524 5634 7.296628 ACCTATGGTTTAATTTGTGCTTGAA 57.703 32.000 0.00 0.00 27.29 2.69
1525 5635 6.909550 ACCTATGGTTTAATTTGTGCTTGA 57.090 33.333 0.00 0.00 27.29 3.02
1526 5636 8.686334 AGATACCTATGGTTTAATTTGTGCTTG 58.314 33.333 0.00 0.00 37.09 4.01
1527 5637 8.823220 AGATACCTATGGTTTAATTTGTGCTT 57.177 30.769 0.00 0.00 37.09 3.91
1528 5638 8.823220 AAGATACCTATGGTTTAATTTGTGCT 57.177 30.769 0.00 0.00 37.09 4.40
1529 5639 9.301153 CAAAGATACCTATGGTTTAATTTGTGC 57.699 33.333 0.00 0.00 37.09 4.57
1536 5646 9.158233 CGAGTTTCAAAGATACCTATGGTTTAA 57.842 33.333 0.00 0.00 37.09 1.52
1537 5647 7.767198 CCGAGTTTCAAAGATACCTATGGTTTA 59.233 37.037 0.00 0.00 37.09 2.01
1538 5648 6.598064 CCGAGTTTCAAAGATACCTATGGTTT 59.402 38.462 0.00 0.00 37.09 3.27
1539 5649 6.113411 CCGAGTTTCAAAGATACCTATGGTT 58.887 40.000 0.00 0.00 37.09 3.67
1540 5650 5.671493 CCGAGTTTCAAAGATACCTATGGT 58.329 41.667 0.00 0.00 40.16 3.55
1541 5651 4.511826 GCCGAGTTTCAAAGATACCTATGG 59.488 45.833 0.00 0.00 0.00 2.74
1542 5652 5.360591 AGCCGAGTTTCAAAGATACCTATG 58.639 41.667 0.00 0.00 0.00 2.23
1543 5653 5.615925 AGCCGAGTTTCAAAGATACCTAT 57.384 39.130 0.00 0.00 0.00 2.57
1544 5654 5.416271 AAGCCGAGTTTCAAAGATACCTA 57.584 39.130 0.00 0.00 0.00 3.08
1545 5655 3.983044 AGCCGAGTTTCAAAGATACCT 57.017 42.857 0.00 0.00 0.00 3.08
1546 5656 6.679327 ATTAAGCCGAGTTTCAAAGATACC 57.321 37.500 0.00 0.00 0.00 2.73
1547 5657 9.095065 TCTTATTAAGCCGAGTTTCAAAGATAC 57.905 33.333 0.00 0.00 0.00 2.24
1548 5658 9.832445 ATCTTATTAAGCCGAGTTTCAAAGATA 57.168 29.630 0.00 0.00 30.42 1.98
1549 5659 8.738645 ATCTTATTAAGCCGAGTTTCAAAGAT 57.261 30.769 0.00 0.00 0.00 2.40
1550 5660 8.041323 AGATCTTATTAAGCCGAGTTTCAAAGA 58.959 33.333 0.00 0.00 0.00 2.52
1551 5661 8.119226 CAGATCTTATTAAGCCGAGTTTCAAAG 58.881 37.037 0.00 0.00 0.00 2.77
1552 5662 7.822334 TCAGATCTTATTAAGCCGAGTTTCAAA 59.178 33.333 0.00 0.00 0.00 2.69
1553 5663 7.277981 GTCAGATCTTATTAAGCCGAGTTTCAA 59.722 37.037 0.00 0.00 0.00 2.69
1554 5664 6.757010 GTCAGATCTTATTAAGCCGAGTTTCA 59.243 38.462 0.00 0.00 0.00 2.69
1555 5665 6.757010 TGTCAGATCTTATTAAGCCGAGTTTC 59.243 38.462 0.00 0.00 0.00 2.78
1556 5666 6.640518 TGTCAGATCTTATTAAGCCGAGTTT 58.359 36.000 0.00 0.00 0.00 2.66
1557 5667 6.096987 TCTGTCAGATCTTATTAAGCCGAGTT 59.903 38.462 0.00 0.00 0.00 3.01
1558 5668 5.594725 TCTGTCAGATCTTATTAAGCCGAGT 59.405 40.000 0.00 0.00 0.00 4.18
1559 5669 5.918011 GTCTGTCAGATCTTATTAAGCCGAG 59.082 44.000 5.68 0.00 0.00 4.63
1560 5670 5.359860 TGTCTGTCAGATCTTATTAAGCCGA 59.640 40.000 5.68 0.00 0.00 5.54
1561 5671 5.592054 TGTCTGTCAGATCTTATTAAGCCG 58.408 41.667 5.68 0.00 0.00 5.52
1562 5672 7.268586 TCTTGTCTGTCAGATCTTATTAAGCC 58.731 38.462 5.68 0.00 0.00 4.35
1563 5673 8.763356 CATCTTGTCTGTCAGATCTTATTAAGC 58.237 37.037 5.68 0.00 0.00 3.09
1564 5674 8.763356 GCATCTTGTCTGTCAGATCTTATTAAG 58.237 37.037 5.68 0.00 0.00 1.85
1565 5675 7.436376 CGCATCTTGTCTGTCAGATCTTATTAA 59.564 37.037 5.68 0.00 0.00 1.40
1566 5676 6.920210 CGCATCTTGTCTGTCAGATCTTATTA 59.080 38.462 5.68 0.00 0.00 0.98
1567 5677 5.752472 CGCATCTTGTCTGTCAGATCTTATT 59.248 40.000 5.68 0.00 0.00 1.40
1568 5678 5.068329 TCGCATCTTGTCTGTCAGATCTTAT 59.932 40.000 5.68 0.00 0.00 1.73
1569 5679 4.399303 TCGCATCTTGTCTGTCAGATCTTA 59.601 41.667 5.68 0.00 0.00 2.10
1570 5680 3.194329 TCGCATCTTGTCTGTCAGATCTT 59.806 43.478 5.68 0.00 0.00 2.40
1571 5681 2.757314 TCGCATCTTGTCTGTCAGATCT 59.243 45.455 5.68 0.00 0.00 2.75
1572 5682 3.114809 CTCGCATCTTGTCTGTCAGATC 58.885 50.000 5.68 0.93 0.00 2.75
1573 5683 2.757314 TCTCGCATCTTGTCTGTCAGAT 59.243 45.455 5.68 0.00 0.00 2.90
1574 5684 2.162681 TCTCGCATCTTGTCTGTCAGA 58.837 47.619 0.00 0.00 0.00 3.27
1575 5685 2.528125 CTCTCGCATCTTGTCTGTCAG 58.472 52.381 0.00 0.00 0.00 3.51
1576 5686 1.403382 GCTCTCGCATCTTGTCTGTCA 60.403 52.381 0.00 0.00 35.78 3.58
1577 5687 1.135141 AGCTCTCGCATCTTGTCTGTC 60.135 52.381 0.00 0.00 39.10 3.51
1578 5688 0.894141 AGCTCTCGCATCTTGTCTGT 59.106 50.000 0.00 0.00 39.10 3.41
1579 5689 1.659601 CAAGCTCTCGCATCTTGTCTG 59.340 52.381 0.00 0.00 39.10 3.51
1580 5690 2.006056 GCAAGCTCTCGCATCTTGTCT 61.006 52.381 0.00 0.00 39.36 3.41
1581 5691 0.373024 GCAAGCTCTCGCATCTTGTC 59.627 55.000 0.00 0.00 39.36 3.18
1582 5692 0.036577 AGCAAGCTCTCGCATCTTGT 60.037 50.000 5.63 0.00 39.36 3.16
1583 5693 1.931906 TAGCAAGCTCTCGCATCTTG 58.068 50.000 0.00 0.00 39.95 3.02
1584 5694 2.680312 TTAGCAAGCTCTCGCATCTT 57.320 45.000 0.00 0.00 39.10 2.40
1585 5695 2.680312 TTTAGCAAGCTCTCGCATCT 57.320 45.000 0.00 0.00 39.10 2.90
1586 5696 3.747099 TTTTTAGCAAGCTCTCGCATC 57.253 42.857 0.00 0.00 39.10 3.91
1610 5720 9.967451 TCAATTCTTCACCATTAGTTACCAATA 57.033 29.630 0.00 0.00 0.00 1.90
1611 5721 8.877864 TCAATTCTTCACCATTAGTTACCAAT 57.122 30.769 0.00 0.00 0.00 3.16
1612 5722 8.877864 ATCAATTCTTCACCATTAGTTACCAA 57.122 30.769 0.00 0.00 0.00 3.67
1618 5728 9.911788 AGTGAATATCAATTCTTCACCATTAGT 57.088 29.630 10.17 0.00 46.28 2.24
1656 5766 9.623000 TGCTATCAAGTCAGTACTAATACACTA 57.377 33.333 0.00 0.00 33.75 2.74
1657 5767 8.521170 TGCTATCAAGTCAGTACTAATACACT 57.479 34.615 0.00 0.00 33.75 3.55
1658 5768 9.751542 ATTGCTATCAAGTCAGTACTAATACAC 57.248 33.333 0.00 0.00 33.75 2.90
1663 5773 9.314321 GCTTAATTGCTATCAAGTCAGTACTAA 57.686 33.333 0.00 0.00 33.75 2.24
1664 5774 8.474831 TGCTTAATTGCTATCAAGTCAGTACTA 58.525 33.333 0.00 0.00 33.75 1.82
1665 5775 7.331026 TGCTTAATTGCTATCAAGTCAGTACT 58.669 34.615 0.00 0.00 37.65 2.73
1666 5776 7.539712 TGCTTAATTGCTATCAAGTCAGTAC 57.460 36.000 0.00 0.00 35.37 2.73
1667 5777 7.606073 TGTTGCTTAATTGCTATCAAGTCAGTA 59.394 33.333 0.00 0.00 35.37 2.74
1668 5778 6.430925 TGTTGCTTAATTGCTATCAAGTCAGT 59.569 34.615 0.00 0.00 35.37 3.41
1669 5779 6.744537 GTGTTGCTTAATTGCTATCAAGTCAG 59.255 38.462 0.00 0.00 35.37 3.51
1670 5780 6.206438 TGTGTTGCTTAATTGCTATCAAGTCA 59.794 34.615 0.00 0.00 35.37 3.41
1671 5781 6.611381 TGTGTTGCTTAATTGCTATCAAGTC 58.389 36.000 0.00 0.00 35.37 3.01
1672 5782 6.349611 CCTGTGTTGCTTAATTGCTATCAAGT 60.350 38.462 0.00 0.00 35.37 3.16
1673 5783 6.032094 CCTGTGTTGCTTAATTGCTATCAAG 58.968 40.000 0.00 0.00 35.37 3.02
1674 5784 5.476599 ACCTGTGTTGCTTAATTGCTATCAA 59.523 36.000 0.00 0.00 36.51 2.57
1675 5785 5.009631 ACCTGTGTTGCTTAATTGCTATCA 58.990 37.500 0.00 0.00 0.00 2.15
1676 5786 5.567138 ACCTGTGTTGCTTAATTGCTATC 57.433 39.130 0.00 0.00 0.00 2.08
1677 5787 5.713025 CAACCTGTGTTGCTTAATTGCTAT 58.287 37.500 0.00 0.00 44.86 2.97
1678 5788 5.119931 CAACCTGTGTTGCTTAATTGCTA 57.880 39.130 0.00 0.00 44.86 3.49
1679 5789 3.981211 CAACCTGTGTTGCTTAATTGCT 58.019 40.909 0.00 0.00 44.86 3.91
1690 5800 5.461032 TTGTTTGAAAGTCAACCTGTGTT 57.539 34.783 0.00 0.00 35.89 3.32
1691 5801 5.461032 TTTGTTTGAAAGTCAACCTGTGT 57.539 34.783 0.00 0.00 35.89 3.72
1692 5802 6.777526 TTTTTGTTTGAAAGTCAACCTGTG 57.222 33.333 0.00 0.00 35.89 3.66
1727 5837 9.420682 ACAGATCTGTTGGGTCTGAAAGATACC 62.421 44.444 22.89 0.00 43.64 2.73
1728 5838 6.575254 ACAGATCTGTTGGGTCTGAAAGATAC 60.575 42.308 22.89 0.00 43.64 2.24
1729 5839 5.485353 ACAGATCTGTTGGGTCTGAAAGATA 59.515 40.000 22.89 0.00 43.64 1.98
1730 5840 4.288105 ACAGATCTGTTGGGTCTGAAAGAT 59.712 41.667 22.89 0.00 43.64 2.40
1731 5841 3.648067 ACAGATCTGTTGGGTCTGAAAGA 59.352 43.478 22.89 0.00 41.83 2.52
1732 5842 4.013267 ACAGATCTGTTGGGTCTGAAAG 57.987 45.455 22.89 0.00 41.83 2.62
1733 5843 5.248248 TGATACAGATCTGTTGGGTCTGAAA 59.752 40.000 32.14 11.61 41.83 2.69
1734 5844 4.777366 TGATACAGATCTGTTGGGTCTGAA 59.223 41.667 32.14 12.36 41.83 3.02
1735 5845 4.352893 TGATACAGATCTGTTGGGTCTGA 58.647 43.478 32.14 13.10 41.83 3.27
1736 5846 4.743057 TGATACAGATCTGTTGGGTCTG 57.257 45.455 32.14 2.92 41.83 3.51
1737 5847 5.013079 TGTTTGATACAGATCTGTTGGGTCT 59.987 40.000 32.14 9.25 41.83 3.85
1738 5848 5.122396 GTGTTTGATACAGATCTGTTGGGTC 59.878 44.000 32.14 22.80 41.83 4.46
1739 5849 5.003804 GTGTTTGATACAGATCTGTTGGGT 58.996 41.667 32.14 16.37 41.83 4.51
1740 5850 5.003160 TGTGTTTGATACAGATCTGTTGGG 58.997 41.667 32.14 4.44 41.83 4.12
1741 5851 5.469760 TGTGTGTTTGATACAGATCTGTTGG 59.530 40.000 32.14 4.86 41.83 3.77
1742 5852 6.544038 TGTGTGTTTGATACAGATCTGTTG 57.456 37.500 32.14 6.27 41.83 3.33
1743 5853 6.542005 TGTTGTGTGTTTGATACAGATCTGTT 59.458 34.615 32.14 19.65 41.83 3.16
1744 5854 6.054941 TGTTGTGTGTTTGATACAGATCTGT 58.945 36.000 30.11 30.11 46.87 3.41
1745 5855 6.544038 TGTTGTGTGTTTGATACAGATCTG 57.456 37.500 21.37 21.37 37.45 2.90
1746 5856 6.149973 CCATGTTGTGTGTTTGATACAGATCT 59.850 38.462 0.00 0.00 37.45 2.75
1747 5857 6.072508 ACCATGTTGTGTGTTTGATACAGATC 60.073 38.462 0.00 0.00 37.45 2.75
1748 5858 5.769662 ACCATGTTGTGTGTTTGATACAGAT 59.230 36.000 0.00 0.00 37.45 2.90
1749 5859 5.129634 ACCATGTTGTGTGTTTGATACAGA 58.870 37.500 0.00 0.00 37.45 3.41
1750 5860 5.437289 ACCATGTTGTGTGTTTGATACAG 57.563 39.130 0.00 0.00 37.45 2.74
1751 5861 6.292150 TCTACCATGTTGTGTGTTTGATACA 58.708 36.000 0.00 0.00 0.00 2.29
1752 5862 6.649141 TCTCTACCATGTTGTGTGTTTGATAC 59.351 38.462 0.00 0.00 0.00 2.24
1753 5863 6.764379 TCTCTACCATGTTGTGTGTTTGATA 58.236 36.000 0.00 0.00 0.00 2.15
1754 5864 5.620206 TCTCTACCATGTTGTGTGTTTGAT 58.380 37.500 0.00 0.00 0.00 2.57
1755 5865 5.029807 TCTCTACCATGTTGTGTGTTTGA 57.970 39.130 0.00 0.00 0.00 2.69
1756 5866 5.947228 ATCTCTACCATGTTGTGTGTTTG 57.053 39.130 0.00 0.00 0.00 2.93
1757 5867 6.530120 TGTATCTCTACCATGTTGTGTGTTT 58.470 36.000 0.00 0.00 0.00 2.83
1758 5868 6.109156 TGTATCTCTACCATGTTGTGTGTT 57.891 37.500 0.00 0.00 0.00 3.32
1759 5869 5.738619 TGTATCTCTACCATGTTGTGTGT 57.261 39.130 0.00 0.00 0.00 3.72
1760 5870 8.716646 TTTATGTATCTCTACCATGTTGTGTG 57.283 34.615 0.00 0.00 0.00 3.82
1761 5871 9.733556 TTTTTATGTATCTCTACCATGTTGTGT 57.266 29.630 0.00 0.00 0.00 3.72
1784 5894 8.952278 TCGCCATTAATGTCTAATGTAGTTTTT 58.048 29.630 14.25 0.00 34.13 1.94
1785 5895 8.500753 TCGCCATTAATGTCTAATGTAGTTTT 57.499 30.769 14.25 0.00 34.13 2.43
1786 5896 8.500753 TTCGCCATTAATGTCTAATGTAGTTT 57.499 30.769 14.25 0.00 34.13 2.66
1787 5897 7.985184 TCTTCGCCATTAATGTCTAATGTAGTT 59.015 33.333 14.25 0.00 34.13 2.24
1788 5898 7.438459 GTCTTCGCCATTAATGTCTAATGTAGT 59.562 37.037 14.25 0.00 34.13 2.73
1789 5899 7.653713 AGTCTTCGCCATTAATGTCTAATGTAG 59.346 37.037 14.25 0.00 34.13 2.74
1790 5900 7.497595 AGTCTTCGCCATTAATGTCTAATGTA 58.502 34.615 14.25 0.00 34.13 2.29
1791 5901 6.349300 AGTCTTCGCCATTAATGTCTAATGT 58.651 36.000 14.25 0.00 34.13 2.71
1792 5902 6.851222 AGTCTTCGCCATTAATGTCTAATG 57.149 37.500 14.25 0.00 35.34 1.90
1793 5903 7.011482 GTCAAGTCTTCGCCATTAATGTCTAAT 59.989 37.037 14.25 0.00 0.00 1.73
1794 5904 6.312918 GTCAAGTCTTCGCCATTAATGTCTAA 59.687 38.462 14.25 0.00 0.00 2.10
1795 5905 5.810587 GTCAAGTCTTCGCCATTAATGTCTA 59.189 40.000 14.25 0.00 0.00 2.59
1796 5906 4.631813 GTCAAGTCTTCGCCATTAATGTCT 59.368 41.667 14.25 0.00 0.00 3.41
1797 5907 4.631813 AGTCAAGTCTTCGCCATTAATGTC 59.368 41.667 14.25 0.05 0.00 3.06
1798 5908 4.579869 AGTCAAGTCTTCGCCATTAATGT 58.420 39.130 14.25 0.00 0.00 2.71
1799 5909 6.851222 ATAGTCAAGTCTTCGCCATTAATG 57.149 37.500 8.58 8.58 0.00 1.90
1800 5910 9.561069 AAATATAGTCAAGTCTTCGCCATTAAT 57.439 29.630 0.00 0.00 0.00 1.40
1801 5911 8.958119 AAATATAGTCAAGTCTTCGCCATTAA 57.042 30.769 0.00 0.00 0.00 1.40
1802 5912 8.201464 TGAAATATAGTCAAGTCTTCGCCATTA 58.799 33.333 0.00 0.00 0.00 1.90
1803 5913 7.047891 TGAAATATAGTCAAGTCTTCGCCATT 58.952 34.615 0.00 0.00 0.00 3.16
1804 5914 6.582636 TGAAATATAGTCAAGTCTTCGCCAT 58.417 36.000 0.00 0.00 0.00 4.40
1805 5915 5.972935 TGAAATATAGTCAAGTCTTCGCCA 58.027 37.500 0.00 0.00 0.00 5.69
1806 5916 6.019479 CACTGAAATATAGTCAAGTCTTCGCC 60.019 42.308 0.00 0.00 0.00 5.54
1807 5917 6.531948 ACACTGAAATATAGTCAAGTCTTCGC 59.468 38.462 0.00 0.00 0.00 4.70
1808 5918 9.737427 ATACACTGAAATATAGTCAAGTCTTCG 57.263 33.333 0.00 0.00 0.00 3.79
1823 5933 8.850156 GCCACTGGAATAATAATACACTGAAAT 58.150 33.333 0.00 0.00 0.00 2.17
1824 5934 7.831690 TGCCACTGGAATAATAATACACTGAAA 59.168 33.333 0.00 0.00 0.00 2.69
1825 5935 7.342581 TGCCACTGGAATAATAATACACTGAA 58.657 34.615 0.00 0.00 0.00 3.02
1826 5936 6.894682 TGCCACTGGAATAATAATACACTGA 58.105 36.000 0.00 0.00 0.00 3.41
1827 5937 7.566760 TTGCCACTGGAATAATAATACACTG 57.433 36.000 0.00 0.00 0.00 3.66
1828 5938 9.860650 TTATTGCCACTGGAATAATAATACACT 57.139 29.630 0.00 0.00 0.00 3.55
1837 5947 9.646427 GTGTTTAATTTATTGCCACTGGAATAA 57.354 29.630 0.00 4.31 0.00 1.40
1838 5948 8.254508 GGTGTTTAATTTATTGCCACTGGAATA 58.745 33.333 0.00 0.00 0.00 1.75
1839 5949 7.102993 GGTGTTTAATTTATTGCCACTGGAAT 58.897 34.615 0.00 0.00 0.00 3.01
1840 5950 6.042093 TGGTGTTTAATTTATTGCCACTGGAA 59.958 34.615 0.00 0.00 0.00 3.53
1841 5951 5.540337 TGGTGTTTAATTTATTGCCACTGGA 59.460 36.000 0.00 0.00 0.00 3.86
1842 5952 5.788450 TGGTGTTTAATTTATTGCCACTGG 58.212 37.500 0.00 0.00 0.00 4.00
1843 5953 8.994429 TTATGGTGTTTAATTTATTGCCACTG 57.006 30.769 0.00 0.00 0.00 3.66
1844 5954 7.763985 GCTTATGGTGTTTAATTTATTGCCACT 59.236 33.333 0.00 0.00 0.00 4.00
1845 5955 7.763985 AGCTTATGGTGTTTAATTTATTGCCAC 59.236 33.333 0.00 0.00 0.00 5.01
1846 5956 7.763528 CAGCTTATGGTGTTTAATTTATTGCCA 59.236 33.333 0.00 0.00 36.97 4.92
1847 5957 7.978975 TCAGCTTATGGTGTTTAATTTATTGCC 59.021 33.333 7.58 0.00 41.91 4.52
1848 5958 8.807581 GTCAGCTTATGGTGTTTAATTTATTGC 58.192 33.333 7.58 0.00 41.91 3.56
1852 5962 9.906660 CAAAGTCAGCTTATGGTGTTTAATTTA 57.093 29.630 7.58 0.00 41.91 1.40
1853 5963 8.637986 TCAAAGTCAGCTTATGGTGTTTAATTT 58.362 29.630 7.58 0.00 41.91 1.82
1854 5964 8.177119 TCAAAGTCAGCTTATGGTGTTTAATT 57.823 30.769 7.58 0.00 41.91 1.40
1855 5965 7.759489 TCAAAGTCAGCTTATGGTGTTTAAT 57.241 32.000 7.58 0.00 41.91 1.40
1856 5966 7.446931 TGATCAAAGTCAGCTTATGGTGTTTAA 59.553 33.333 7.58 0.00 41.91 1.52
1857 5967 6.939730 TGATCAAAGTCAGCTTATGGTGTTTA 59.060 34.615 7.58 0.00 41.91 2.01
1858 5968 5.769662 TGATCAAAGTCAGCTTATGGTGTTT 59.230 36.000 7.58 0.38 41.91 2.83
1859 5969 5.316167 TGATCAAAGTCAGCTTATGGTGTT 58.684 37.500 7.58 0.00 41.91 3.32
1860 5970 4.910195 TGATCAAAGTCAGCTTATGGTGT 58.090 39.130 7.58 0.00 41.91 4.16
1861 5971 6.094464 TCAATGATCAAAGTCAGCTTATGGTG 59.906 38.462 0.00 1.53 42.54 4.17
1862 5972 6.182627 TCAATGATCAAAGTCAGCTTATGGT 58.817 36.000 0.00 0.00 33.95 3.55
1863 5973 6.688637 TCAATGATCAAAGTCAGCTTATGG 57.311 37.500 0.00 0.00 33.95 2.74
1864 5974 7.982224 TCTTCAATGATCAAAGTCAGCTTATG 58.018 34.615 0.00 0.00 33.95 1.90
1865 5975 8.045507 TCTCTTCAATGATCAAAGTCAGCTTAT 58.954 33.333 0.00 0.00 33.95 1.73
1866 5976 7.389232 TCTCTTCAATGATCAAAGTCAGCTTA 58.611 34.615 0.00 0.00 33.95 3.09
1867 5977 6.236409 TCTCTTCAATGATCAAAGTCAGCTT 58.764 36.000 0.00 0.00 36.30 3.74
1868 5978 5.802465 TCTCTTCAATGATCAAAGTCAGCT 58.198 37.500 0.00 0.00 0.00 4.24
1869 5979 6.072838 TGTTCTCTTCAATGATCAAAGTCAGC 60.073 38.462 0.00 0.00 0.00 4.26
1870 5980 7.430992 TGTTCTCTTCAATGATCAAAGTCAG 57.569 36.000 0.00 0.00 0.00 3.51
1871 5981 7.040892 CCTTGTTCTCTTCAATGATCAAAGTCA 60.041 37.037 0.00 0.00 0.00 3.41
1872 5982 7.173907 TCCTTGTTCTCTTCAATGATCAAAGTC 59.826 37.037 0.00 0.00 0.00 3.01
1873 5983 7.000472 TCCTTGTTCTCTTCAATGATCAAAGT 59.000 34.615 0.00 0.00 0.00 2.66
1874 5984 7.444629 TCCTTGTTCTCTTCAATGATCAAAG 57.555 36.000 0.00 0.00 0.00 2.77
1875 5985 7.666804 TCATCCTTGTTCTCTTCAATGATCAAA 59.333 33.333 0.00 0.00 31.45 2.69
1876 5986 7.170277 TCATCCTTGTTCTCTTCAATGATCAA 58.830 34.615 0.00 0.00 31.45 2.57
1877 5987 6.714278 TCATCCTTGTTCTCTTCAATGATCA 58.286 36.000 0.00 0.00 31.45 2.92
1878 5988 7.621428 TTCATCCTTGTTCTCTTCAATGATC 57.379 36.000 0.00 0.00 31.45 2.92
1879 5989 8.413309 TTTTCATCCTTGTTCTCTTCAATGAT 57.587 30.769 0.00 0.00 33.06 2.45
1880 5990 7.822161 TTTTCATCCTTGTTCTCTTCAATGA 57.178 32.000 0.00 0.00 0.00 2.57
1881 5991 7.115947 GCTTTTTCATCCTTGTTCTCTTCAATG 59.884 37.037 0.00 0.00 0.00 2.82
1882 5992 7.150640 GCTTTTTCATCCTTGTTCTCTTCAAT 58.849 34.615 0.00 0.00 0.00 2.57
1883 5993 6.096705 TGCTTTTTCATCCTTGTTCTCTTCAA 59.903 34.615 0.00 0.00 0.00 2.69
1884 5994 5.593909 TGCTTTTTCATCCTTGTTCTCTTCA 59.406 36.000 0.00 0.00 0.00 3.02
1885 5995 6.076981 TGCTTTTTCATCCTTGTTCTCTTC 57.923 37.500 0.00 0.00 0.00 2.87
1886 5996 6.469782 TTGCTTTTTCATCCTTGTTCTCTT 57.530 33.333 0.00 0.00 0.00 2.85
1887 5997 6.661304 ATTGCTTTTTCATCCTTGTTCTCT 57.339 33.333 0.00 0.00 0.00 3.10
1888 5998 6.925165 TCAATTGCTTTTTCATCCTTGTTCTC 59.075 34.615 0.00 0.00 0.00 2.87
1889 5999 6.819284 TCAATTGCTTTTTCATCCTTGTTCT 58.181 32.000 0.00 0.00 0.00 3.01
1890 6000 6.925165 TCTCAATTGCTTTTTCATCCTTGTTC 59.075 34.615 0.00 0.00 0.00 3.18
1891 6001 6.819284 TCTCAATTGCTTTTTCATCCTTGTT 58.181 32.000 0.00 0.00 0.00 2.83
1892 6002 6.409524 TCTCAATTGCTTTTTCATCCTTGT 57.590 33.333 0.00 0.00 0.00 3.16
1893 6003 6.927381 ACTTCTCAATTGCTTTTTCATCCTTG 59.073 34.615 0.00 0.00 0.00 3.61
1894 6004 7.059202 ACTTCTCAATTGCTTTTTCATCCTT 57.941 32.000 0.00 0.00 0.00 3.36
1895 6005 6.661304 ACTTCTCAATTGCTTTTTCATCCT 57.339 33.333 0.00 0.00 0.00 3.24
1896 6006 6.367149 GGAACTTCTCAATTGCTTTTTCATCC 59.633 38.462 0.00 0.00 0.00 3.51
1897 6007 7.115947 CAGGAACTTCTCAATTGCTTTTTCATC 59.884 37.037 0.00 0.00 34.60 2.92
1898 6008 6.927381 CAGGAACTTCTCAATTGCTTTTTCAT 59.073 34.615 0.00 0.00 34.60 2.57
1899 6009 6.127366 ACAGGAACTTCTCAATTGCTTTTTCA 60.127 34.615 0.00 0.00 34.60 2.69
1900 6010 6.276091 ACAGGAACTTCTCAATTGCTTTTTC 58.724 36.000 0.00 0.00 34.60 2.29
1901 6011 6.127366 TGACAGGAACTTCTCAATTGCTTTTT 60.127 34.615 0.00 0.00 34.60 1.94
1902 6012 5.360714 TGACAGGAACTTCTCAATTGCTTTT 59.639 36.000 0.00 0.00 34.60 2.27
1903 6013 4.889409 TGACAGGAACTTCTCAATTGCTTT 59.111 37.500 0.00 0.00 34.60 3.51
1904 6014 4.464008 TGACAGGAACTTCTCAATTGCTT 58.536 39.130 0.00 0.00 34.60 3.91
1905 6015 4.090761 TGACAGGAACTTCTCAATTGCT 57.909 40.909 0.00 0.00 34.60 3.91
1906 6016 4.380233 CCATGACAGGAACTTCTCAATTGC 60.380 45.833 0.00 0.00 34.60 3.56
1907 6017 4.763793 ACCATGACAGGAACTTCTCAATTG 59.236 41.667 0.00 0.00 34.60 2.32
1908 6018 4.990526 ACCATGACAGGAACTTCTCAATT 58.009 39.130 0.00 0.00 34.60 2.32
1909 6019 4.647564 ACCATGACAGGAACTTCTCAAT 57.352 40.909 0.00 0.00 34.60 2.57
1910 6020 5.762179 ATACCATGACAGGAACTTCTCAA 57.238 39.130 0.00 0.00 34.60 3.02
1911 6021 5.762179 AATACCATGACAGGAACTTCTCA 57.238 39.130 0.00 0.00 34.60 3.27
1912 6022 6.655003 TGAAAATACCATGACAGGAACTTCTC 59.345 38.462 0.00 0.00 34.60 2.87
1913 6023 6.542821 TGAAAATACCATGACAGGAACTTCT 58.457 36.000 0.00 0.00 34.60 2.85
1914 6024 6.817765 TGAAAATACCATGACAGGAACTTC 57.182 37.500 0.00 0.00 34.60 3.01
1915 6025 6.153340 CCATGAAAATACCATGACAGGAACTT 59.847 38.462 0.00 0.00 42.89 2.66
1916 6026 5.653769 CCATGAAAATACCATGACAGGAACT 59.346 40.000 0.00 0.00 42.89 3.01
1917 6027 5.679638 GCCATGAAAATACCATGACAGGAAC 60.680 44.000 0.00 0.00 42.89 3.62
1918 6028 4.402155 GCCATGAAAATACCATGACAGGAA 59.598 41.667 0.00 0.00 42.89 3.36
1919 6029 3.953612 GCCATGAAAATACCATGACAGGA 59.046 43.478 0.00 0.00 42.89 3.86
1920 6030 3.700539 TGCCATGAAAATACCATGACAGG 59.299 43.478 0.00 0.00 42.89 4.00
1938 6048 1.361204 TCCTTTGAGGACATCTGCCA 58.639 50.000 0.00 0.00 40.06 4.92
1953 6063 1.511768 GCCTCGCGACTAAGTCCTT 59.488 57.895 3.71 0.00 0.00 3.36
1977 6087 1.379527 CCTGAACTACCGCCCAATTC 58.620 55.000 0.00 0.00 0.00 2.17
1981 6091 3.006728 CCCCTGAACTACCGCCCA 61.007 66.667 0.00 0.00 0.00 5.36
1982 6092 3.793888 CCCCCTGAACTACCGCCC 61.794 72.222 0.00 0.00 0.00 6.13
1985 6095 1.904537 AGTTAACCCCCTGAACTACCG 59.095 52.381 0.88 0.00 31.69 4.02
1991 6101 1.422402 GTGTCCAGTTAACCCCCTGAA 59.578 52.381 0.88 0.00 0.00 3.02
1994 6104 0.472352 TCGTGTCCAGTTAACCCCCT 60.472 55.000 0.88 0.00 0.00 4.79
1995 6105 0.036671 CTCGTGTCCAGTTAACCCCC 60.037 60.000 0.88 0.00 0.00 5.40
2004 6115 1.502231 CTTGTGTTCCTCGTGTCCAG 58.498 55.000 0.00 0.00 0.00 3.86
2015 6126 2.940158 ACCTGGGTAAACCTTGTGTTC 58.060 47.619 0.00 0.00 41.11 3.18
2016 6127 3.293337 GAACCTGGGTAAACCTTGTGTT 58.707 45.455 0.00 0.00 41.11 3.32
2046 6157 1.277273 GTAGGCTTTTACCTCCACCGT 59.723 52.381 0.00 0.00 41.50 4.83
2047 6158 1.738030 CGTAGGCTTTTACCTCCACCG 60.738 57.143 0.00 0.00 41.50 4.94
2051 6162 1.829849 AGGACGTAGGCTTTTACCTCC 59.170 52.381 0.00 0.00 41.50 4.30
2077 6188 6.941218 ATCGAGATCATCATCAATACAACG 57.059 37.500 0.00 0.00 0.00 4.10
2102 6213 2.116125 GCCAAGAGCACCCCTTGT 59.884 61.111 0.00 0.00 42.97 3.16
2114 6225 5.163499 CCTCTTGAGTACTAGGTTAGCCAAG 60.163 48.000 0.00 2.86 37.19 3.61
2133 6244 7.442666 GTCAGAAAGATCAAGTTACAACCTCTT 59.557 37.037 0.00 0.00 0.00 2.85
2193 6304 4.431378 TCCAGACTCTATTGTAAACCCCA 58.569 43.478 0.00 0.00 0.00 4.96
2198 6310 7.759886 CGTTTCTGATCCAGACTCTATTGTAAA 59.240 37.037 0.00 0.00 40.46 2.01
2199 6311 7.122204 TCGTTTCTGATCCAGACTCTATTGTAA 59.878 37.037 0.00 0.00 40.46 2.41
2212 6324 1.203052 GTACGGGTCGTTTCTGATCCA 59.797 52.381 0.00 0.00 39.23 3.41
2214 6326 1.203052 TGGTACGGGTCGTTTCTGATC 59.797 52.381 0.00 0.00 41.54 2.92
2215 6327 1.259609 TGGTACGGGTCGTTTCTGAT 58.740 50.000 0.00 0.00 41.54 2.90
2216 6328 1.259609 ATGGTACGGGTCGTTTCTGA 58.740 50.000 0.00 0.00 41.54 3.27
2218 6330 2.424956 GACTATGGTACGGGTCGTTTCT 59.575 50.000 0.00 0.00 41.54 2.52
2225 6338 4.997545 AGAGATAGACTATGGTACGGGT 57.002 45.455 0.00 0.00 0.00 5.28
2231 6344 6.295575 GGCATGCTAAAGAGATAGACTATGGT 60.296 42.308 18.92 0.00 0.00 3.55
2232 6345 6.070881 AGGCATGCTAAAGAGATAGACTATGG 60.071 42.308 18.92 0.00 0.00 2.74
2235 6348 6.985653 AAGGCATGCTAAAGAGATAGACTA 57.014 37.500 18.92 0.00 0.00 2.59
2239 6352 8.313292 AGAAGATAAGGCATGCTAAAGAGATAG 58.687 37.037 18.92 0.00 0.00 2.08
2241 6354 7.077050 AGAAGATAAGGCATGCTAAAGAGAT 57.923 36.000 18.92 1.75 0.00 2.75
2247 6360 5.928976 TGCTTAGAAGATAAGGCATGCTAA 58.071 37.500 18.92 3.50 0.00 3.09
2250 6363 4.023365 CCTTGCTTAGAAGATAAGGCATGC 60.023 45.833 9.90 9.90 36.11 4.06
2254 6367 6.759497 TTTTCCTTGCTTAGAAGATAAGGC 57.241 37.500 15.54 0.00 39.61 4.35
2255 6368 8.239998 CAGTTTTTCCTTGCTTAGAAGATAAGG 58.760 37.037 14.74 14.74 40.40 2.69
2259 6372 8.691661 TTACAGTTTTTCCTTGCTTAGAAGAT 57.308 30.769 0.00 0.00 0.00 2.40
2260 6373 7.228706 CCTTACAGTTTTTCCTTGCTTAGAAGA 59.771 37.037 0.00 0.00 0.00 2.87
2269 6382 2.621526 ACCGCCTTACAGTTTTTCCTTG 59.378 45.455 0.00 0.00 0.00 3.61
2278 6391 4.939439 CCTTATGTTAAACCGCCTTACAGT 59.061 41.667 0.00 0.00 0.00 3.55
2279 6392 4.334481 CCCTTATGTTAAACCGCCTTACAG 59.666 45.833 0.00 0.00 0.00 2.74
2281 6394 3.065786 GCCCTTATGTTAAACCGCCTTAC 59.934 47.826 0.00 0.00 0.00 2.34
2284 6397 1.683938 GGCCCTTATGTTAAACCGCCT 60.684 52.381 0.00 0.00 32.31 5.52
2326 6439 1.419387 GAAGCCACCCATAGATGAGCT 59.581 52.381 0.00 0.00 0.00 4.09
2329 6442 3.387962 AGAAGAAGCCACCCATAGATGA 58.612 45.455 0.00 0.00 0.00 2.92
2335 6448 1.482593 CGTCTAGAAGAAGCCACCCAT 59.517 52.381 0.00 0.00 0.00 4.00
2336 6449 0.895530 CGTCTAGAAGAAGCCACCCA 59.104 55.000 0.00 0.00 0.00 4.51
2340 6453 2.488545 GAGACACGTCTAGAAGAAGCCA 59.511 50.000 12.91 0.00 40.61 4.75
2345 6461 5.705905 TGATCAAAGAGACACGTCTAGAAGA 59.294 40.000 12.91 0.00 40.61 2.87
2351 6467 2.351835 CGGTGATCAAAGAGACACGTCT 60.352 50.000 0.00 0.00 43.78 4.18
2354 6470 0.716108 GCGGTGATCAAAGAGACACG 59.284 55.000 0.00 0.00 32.52 4.49
2356 6473 0.389817 CCGCGGTGATCAAAGAGACA 60.390 55.000 19.50 0.00 0.00 3.41
2361 6478 3.508840 GGGCCGCGGTGATCAAAG 61.509 66.667 28.70 0.00 0.00 2.77
2362 6479 4.337177 TGGGCCGCGGTGATCAAA 62.337 61.111 28.70 2.69 0.00 2.69
2395 6515 2.494059 GTCACTGAAGTGGCTGCTTAA 58.506 47.619 7.80 0.00 46.41 1.85
2408 6528 1.536907 TTTAGGGCCGGGTCACTGA 60.537 57.895 2.18 0.00 0.00 3.41
2409 6529 1.376812 GTTTAGGGCCGGGTCACTG 60.377 63.158 2.18 0.00 0.00 3.66
2410 6530 2.951101 CGTTTAGGGCCGGGTCACT 61.951 63.158 2.18 0.00 0.00 3.41
2424 6544 1.377594 GATGTAACCCGCCCCGTTT 60.378 57.895 0.00 0.00 0.00 3.60
2431 6551 2.192175 CCCCAGGATGTAACCCGC 59.808 66.667 0.00 0.00 0.00 6.13
2439 6559 3.456277 GGGCTAGATATAACCCCAGGATG 59.544 52.174 0.00 0.00 36.24 3.51
2456 6576 1.377690 TCAAATCAACCTGGGGGCTA 58.622 50.000 0.00 0.00 35.63 3.93
2457 6577 2.172900 TCAAATCAACCTGGGGGCT 58.827 52.632 0.00 0.00 35.63 5.19
2458 6578 4.863415 TCAAATCAACCTGGGGGC 57.137 55.556 0.00 0.00 35.63 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.