Multiple sequence alignment - TraesCS1B01G342300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G342300 chr1B 100.000 2315 0 0 1 2315 570509113 570506799 0.000000e+00 4276
1 TraesCS1B01G342300 chr1B 97.810 411 9 0 934 1344 25165040 25164630 0.000000e+00 710
2 TraesCS1B01G342300 chr1B 97.567 411 9 1 934 1344 25204440 25204031 0.000000e+00 702
3 TraesCS1B01G342300 chr1B 97.330 412 10 1 934 1344 25238948 25238537 0.000000e+00 699
4 TraesCS1B01G342300 chr1B 96.837 411 13 0 934 1344 25127941 25127531 0.000000e+00 688
5 TraesCS1B01G342300 chr5A 93.711 970 47 7 1348 2315 9496061 9497018 0.000000e+00 1441
6 TraesCS1B01G342300 chr5A 92.680 765 35 9 9 753 9495147 9495910 0.000000e+00 1083
7 TraesCS1B01G342300 chr5A 97.555 409 10 0 934 1342 708963089 708962681 0.000000e+00 701
8 TraesCS1B01G342300 chr5A 90.062 161 6 3 789 941 9495909 9496067 1.400000e-47 200
9 TraesCS1B01G342300 chr6A 93.289 909 46 8 1409 2315 101832518 101833413 0.000000e+00 1327
10 TraesCS1B01G342300 chr6A 92.923 763 32 10 9 750 101830323 101831084 0.000000e+00 1090
11 TraesCS1B01G342300 chr6A 87.117 163 6 5 790 939 101831087 101831247 1.100000e-38 171
12 TraesCS1B01G342300 chr6A 93.846 65 4 0 1348 1412 101831243 101831307 5.260000e-17 99
13 TraesCS1B01G342300 chr6B 98.540 411 6 0 934 1344 224859319 224859729 0.000000e+00 726
14 TraesCS1B01G342300 chr3B 98.544 412 5 1 934 1344 791882221 791882632 0.000000e+00 726
15 TraesCS1B01G342300 chr3B 97.810 411 9 0 934 1344 61902543 61902133 0.000000e+00 710
16 TraesCS1B01G342300 chr3B 82.906 351 40 8 1420 1758 458420282 458420624 4.840000e-77 298
17 TraesCS1B01G342300 chr3B 79.599 299 35 13 1494 1780 40796819 40797103 8.440000e-45 191
18 TraesCS1B01G342300 chr4A 98.044 409 8 0 934 1342 702724193 702724601 0.000000e+00 712
19 TraesCS1B01G342300 chrUn 82.906 351 40 8 1423 1761 362889275 362888933 4.840000e-77 298
20 TraesCS1B01G342300 chr4B 82.659 346 51 7 1420 1758 592202239 592202582 4.840000e-77 298
21 TraesCS1B01G342300 chr3A 82.621 351 41 8 1423 1761 94593704 94593362 2.250000e-75 292
22 TraesCS1B01G342300 chr3A 81.081 296 34 10 1494 1780 32221184 32221466 1.390000e-52 217
23 TraesCS1B01G342300 chr7A 78.571 504 60 28 435 922 126129928 126130399 2.910000e-74 289
24 TraesCS1B01G342300 chr5B 78.416 505 58 29 435 922 555299097 555299567 4.870000e-72 281
25 TraesCS1B01G342300 chr1D 84.774 243 28 7 1518 1757 384778152 384777916 3.850000e-58 235


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G342300 chr1B 570506799 570509113 2314 True 4276.00 4276 100.00000 1 2315 1 chr1B.!!$R5 2314
1 TraesCS1B01G342300 chr5A 9495147 9497018 1871 False 908.00 1441 92.15100 9 2315 3 chr5A.!!$F1 2306
2 TraesCS1B01G342300 chr6A 101830323 101833413 3090 False 671.75 1327 91.79375 9 2315 4 chr6A.!!$F1 2306

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
979 1014 0.033228 TTTTTGCCGGGATGCACTTG 59.967 50.0 2.18 0.0 41.88 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1785 3032 0.878961 GGAGGTTGTGTCACCGTCAC 60.879 60.0 0.0 0.0 42.33 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.589798 TACCATCCGTCATCCGTTTC 57.410 50.000 0.00 0.00 33.66 2.78
49 50 7.414762 CGTTTCCATCCGTAAATTATGGACTTT 60.415 37.037 15.54 0.00 46.77 2.66
68 69 4.154918 ACTTTTCTGGAATGAAGACGCATC 59.845 41.667 2.88 0.00 0.00 3.91
196 197 1.396996 CGTGGCAAAGCTACCATACAC 59.603 52.381 6.35 2.04 36.69 2.90
211 212 1.463674 TACACATCTCGCTCTGAGCA 58.536 50.000 27.46 14.45 44.86 4.26
219 234 1.217511 CGCTCTGAGCAGTCATGGT 59.782 57.895 27.46 0.00 42.58 3.55
220 235 1.082679 CGCTCTGAGCAGTCATGGTG 61.083 60.000 27.46 5.80 42.58 4.17
271 287 4.789075 TCGCCGCCTAAGACGTGC 62.789 66.667 0.00 0.00 0.00 5.34
426 442 1.008424 ACACGTCTCACTGCTGTCG 60.008 57.895 0.00 0.00 0.00 4.35
433 449 2.126307 CACTGCTGTCGTCCTCCG 60.126 66.667 0.00 0.00 38.13 4.63
437 453 4.373116 GCTGTCGTCCTCCGCCAA 62.373 66.667 0.00 0.00 36.19 4.52
452 468 0.895100 GCCAACATCTCCTGCACCAA 60.895 55.000 0.00 0.00 0.00 3.67
453 469 1.619654 CCAACATCTCCTGCACCAAA 58.380 50.000 0.00 0.00 0.00 3.28
458 474 1.815003 CATCTCCTGCACCAAAAGGTC 59.185 52.381 0.00 0.00 34.94 3.85
464 480 4.157607 CACCAAAAGGTCGGTGCT 57.842 55.556 0.00 0.00 45.77 4.40
511 532 4.487714 AGCGATCTCAGGTTTATTTGGA 57.512 40.909 0.00 0.00 0.00 3.53
521 542 7.508977 TCTCAGGTTTATTTGGATTGGAACTTT 59.491 33.333 0.00 0.00 0.00 2.66
593 615 2.115291 GTTTCCAGCCGCCTCATCC 61.115 63.158 0.00 0.00 0.00 3.51
674 696 3.305539 GCAAGCATGAAACAACCATCTCA 60.306 43.478 0.00 0.00 0.00 3.27
677 699 3.755378 AGCATGAAACAACCATCTCAGTC 59.245 43.478 0.00 0.00 0.00 3.51
680 702 2.224769 TGAAACAACCATCTCAGTCCCC 60.225 50.000 0.00 0.00 0.00 4.81
751 773 5.059221 GGAACAACGTTGATTTAAAGCGATG 59.941 40.000 33.66 10.70 0.00 3.84
752 774 4.472286 ACAACGTTGATTTAAAGCGATGG 58.528 39.130 33.66 2.37 31.36 3.51
753 775 4.214545 ACAACGTTGATTTAAAGCGATGGA 59.785 37.500 33.66 0.00 31.36 3.41
754 776 5.106317 ACAACGTTGATTTAAAGCGATGGAT 60.106 36.000 33.66 2.72 31.36 3.41
755 777 5.156804 ACGTTGATTTAAAGCGATGGATC 57.843 39.130 15.57 0.00 0.00 3.36
768 790 4.335082 CGATGGATCGTAGTCATCTCTC 57.665 50.000 0.70 0.00 44.74 3.20
769 791 4.000325 CGATGGATCGTAGTCATCTCTCT 59.000 47.826 0.70 0.00 44.74 3.10
770 792 4.454161 CGATGGATCGTAGTCATCTCTCTT 59.546 45.833 0.70 0.00 44.74 2.85
771 793 5.390461 CGATGGATCGTAGTCATCTCTCTTC 60.390 48.000 0.70 0.00 44.74 2.87
772 794 3.810386 TGGATCGTAGTCATCTCTCTTCG 59.190 47.826 0.00 0.00 0.00 3.79
773 795 3.810941 GGATCGTAGTCATCTCTCTTCGT 59.189 47.826 0.00 0.00 0.00 3.85
774 796 4.273969 GGATCGTAGTCATCTCTCTTCGTT 59.726 45.833 0.00 0.00 0.00 3.85
775 797 5.220892 GGATCGTAGTCATCTCTCTTCGTTT 60.221 44.000 0.00 0.00 0.00 3.60
776 798 5.624344 TCGTAGTCATCTCTCTTCGTTTT 57.376 39.130 0.00 0.00 0.00 2.43
777 799 5.391449 TCGTAGTCATCTCTCTTCGTTTTG 58.609 41.667 0.00 0.00 0.00 2.44
778 800 5.048921 TCGTAGTCATCTCTCTTCGTTTTGT 60.049 40.000 0.00 0.00 0.00 2.83
779 801 5.629849 CGTAGTCATCTCTCTTCGTTTTGTT 59.370 40.000 0.00 0.00 0.00 2.83
780 802 6.144080 CGTAGTCATCTCTCTTCGTTTTGTTT 59.856 38.462 0.00 0.00 0.00 2.83
781 803 6.927294 AGTCATCTCTCTTCGTTTTGTTTT 57.073 33.333 0.00 0.00 0.00 2.43
782 804 8.975439 GTAGTCATCTCTCTTCGTTTTGTTTTA 58.025 33.333 0.00 0.00 0.00 1.52
783 805 8.608844 AGTCATCTCTCTTCGTTTTGTTTTAT 57.391 30.769 0.00 0.00 0.00 1.40
784 806 8.499162 AGTCATCTCTCTTCGTTTTGTTTTATG 58.501 33.333 0.00 0.00 0.00 1.90
785 807 8.283291 GTCATCTCTCTTCGTTTTGTTTTATGT 58.717 33.333 0.00 0.00 0.00 2.29
786 808 9.483916 TCATCTCTCTTCGTTTTGTTTTATGTA 57.516 29.630 0.00 0.00 0.00 2.29
810 832 2.096819 GCGCTGATTGGACGGAATAAAA 59.903 45.455 0.00 0.00 0.00 1.52
825 847 7.590279 ACGGAATAAAAAGGTGAAACATACTG 58.410 34.615 0.00 0.00 39.98 2.74
875 903 4.082517 TCTCTCTCTCATACTTGCACACAC 60.083 45.833 0.00 0.00 0.00 3.82
876 904 3.056536 TCTCTCTCATACTTGCACACACC 60.057 47.826 0.00 0.00 0.00 4.16
896 924 9.569122 ACACACCTGTAGTTTAGTATGAATTTT 57.431 29.630 0.00 0.00 0.00 1.82
932 967 8.816640 TTGCTTAGCTTTGATTTTTCTTAAGG 57.183 30.769 5.60 0.00 0.00 2.69
933 968 6.868339 TGCTTAGCTTTGATTTTTCTTAAGGC 59.132 34.615 5.60 0.00 0.00 4.35
934 969 6.868339 GCTTAGCTTTGATTTTTCTTAAGGCA 59.132 34.615 1.85 0.00 0.00 4.75
935 970 7.547019 GCTTAGCTTTGATTTTTCTTAAGGCAT 59.453 33.333 1.85 0.00 0.00 4.40
939 974 9.591792 AGCTTTGATTTTTCTTAAGGCATATTC 57.408 29.630 1.85 0.00 0.00 1.75
940 975 9.591792 GCTTTGATTTTTCTTAAGGCATATTCT 57.408 29.630 1.85 0.00 0.00 2.40
945 980 9.958234 GATTTTTCTTAAGGCATATTCTCTTCC 57.042 33.333 1.85 0.00 0.00 3.46
946 981 9.706529 ATTTTTCTTAAGGCATATTCTCTTCCT 57.293 29.630 1.85 0.00 0.00 3.36
947 982 8.511604 TTTTCTTAAGGCATATTCTCTTCCTG 57.488 34.615 1.85 0.00 0.00 3.86
948 983 6.814954 TCTTAAGGCATATTCTCTTCCTGT 57.185 37.500 1.85 0.00 0.00 4.00
949 984 7.914427 TCTTAAGGCATATTCTCTTCCTGTA 57.086 36.000 1.85 0.00 0.00 2.74
950 985 7.957002 TCTTAAGGCATATTCTCTTCCTGTAG 58.043 38.462 1.85 0.00 0.00 2.74
951 986 5.559148 AAGGCATATTCTCTTCCTGTAGG 57.441 43.478 0.00 0.00 0.00 3.18
952 987 3.326297 AGGCATATTCTCTTCCTGTAGGC 59.674 47.826 0.00 0.00 34.44 3.93
953 988 3.071602 GGCATATTCTCTTCCTGTAGGCA 59.928 47.826 0.00 0.00 34.44 4.75
954 989 4.314121 GCATATTCTCTTCCTGTAGGCAG 58.686 47.826 0.00 0.00 42.22 4.85
955 990 4.202305 GCATATTCTCTTCCTGTAGGCAGT 60.202 45.833 0.00 0.00 41.02 4.40
956 991 5.686124 GCATATTCTCTTCCTGTAGGCAGTT 60.686 44.000 0.00 0.00 41.02 3.16
957 992 6.463049 GCATATTCTCTTCCTGTAGGCAGTTA 60.463 42.308 0.00 0.00 41.02 2.24
958 993 7.675062 CATATTCTCTTCCTGTAGGCAGTTAT 58.325 38.462 0.00 0.00 41.02 1.89
959 994 6.567602 ATTCTCTTCCTGTAGGCAGTTATT 57.432 37.500 0.00 0.00 41.02 1.40
960 995 6.374417 TTCTCTTCCTGTAGGCAGTTATTT 57.626 37.500 0.00 0.00 41.02 1.40
961 996 6.374417 TCTCTTCCTGTAGGCAGTTATTTT 57.626 37.500 0.00 0.00 41.02 1.82
962 997 6.779860 TCTCTTCCTGTAGGCAGTTATTTTT 58.220 36.000 0.00 0.00 41.02 1.94
977 1012 4.189539 TTTTTGCCGGGATGCACT 57.810 50.000 2.18 0.00 41.88 4.40
978 1013 2.435418 TTTTTGCCGGGATGCACTT 58.565 47.368 2.18 0.00 41.88 3.16
979 1014 0.033228 TTTTTGCCGGGATGCACTTG 59.967 50.000 2.18 0.00 41.88 3.16
980 1015 0.825425 TTTTGCCGGGATGCACTTGA 60.825 50.000 2.18 0.00 41.88 3.02
981 1016 0.825425 TTTGCCGGGATGCACTTGAA 60.825 50.000 2.18 0.00 41.88 2.69
982 1017 1.243342 TTGCCGGGATGCACTTGAAG 61.243 55.000 2.18 0.00 41.88 3.02
983 1018 3.056313 GCCGGGATGCACTTGAAGC 62.056 63.158 2.18 0.00 0.00 3.86
984 1019 1.377725 CCGGGATGCACTTGAAGCT 60.378 57.895 0.00 0.00 0.00 3.74
985 1020 1.651240 CCGGGATGCACTTGAAGCTG 61.651 60.000 0.00 0.00 0.00 4.24
986 1021 0.674581 CGGGATGCACTTGAAGCTGA 60.675 55.000 0.00 0.00 0.00 4.26
987 1022 1.538047 GGGATGCACTTGAAGCTGAA 58.462 50.000 0.00 0.00 0.00 3.02
988 1023 2.097825 GGGATGCACTTGAAGCTGAAT 58.902 47.619 0.00 0.00 0.00 2.57
989 1024 2.494870 GGGATGCACTTGAAGCTGAATT 59.505 45.455 0.00 0.00 0.00 2.17
990 1025 3.696051 GGGATGCACTTGAAGCTGAATTA 59.304 43.478 0.00 0.00 0.00 1.40
991 1026 4.340381 GGGATGCACTTGAAGCTGAATTAT 59.660 41.667 0.00 0.00 0.00 1.28
992 1027 5.279384 GGATGCACTTGAAGCTGAATTATG 58.721 41.667 0.00 0.00 0.00 1.90
993 1028 5.163581 GGATGCACTTGAAGCTGAATTATGT 60.164 40.000 0.00 0.00 0.00 2.29
994 1029 5.050644 TGCACTTGAAGCTGAATTATGTG 57.949 39.130 0.00 0.00 0.00 3.21
995 1030 3.855950 GCACTTGAAGCTGAATTATGTGC 59.144 43.478 0.00 0.00 40.72 4.57
996 1031 4.616604 GCACTTGAAGCTGAATTATGTGCA 60.617 41.667 16.10 0.00 44.93 4.57
997 1032 5.647589 CACTTGAAGCTGAATTATGTGCAT 58.352 37.500 0.00 0.00 0.00 3.96
998 1033 5.515270 CACTTGAAGCTGAATTATGTGCATG 59.485 40.000 0.00 0.00 0.00 4.06
999 1034 4.036567 TGAAGCTGAATTATGTGCATGC 57.963 40.909 11.82 11.82 0.00 4.06
1000 1035 3.444388 TGAAGCTGAATTATGTGCATGCA 59.556 39.130 18.46 18.46 0.00 3.96
1001 1036 4.098807 TGAAGCTGAATTATGTGCATGCAT 59.901 37.500 25.64 11.73 0.00 3.96
1002 1037 3.977427 AGCTGAATTATGTGCATGCATG 58.023 40.909 25.64 22.70 0.00 4.06
1003 1038 3.057019 GCTGAATTATGTGCATGCATGG 58.943 45.455 25.64 10.03 0.00 3.66
1004 1039 3.243602 GCTGAATTATGTGCATGCATGGA 60.244 43.478 25.64 22.97 0.00 3.41
1005 1040 4.738243 GCTGAATTATGTGCATGCATGGAA 60.738 41.667 25.64 17.44 0.00 3.53
1006 1041 4.939271 TGAATTATGTGCATGCATGGAAG 58.061 39.130 25.64 2.89 0.00 3.46
1007 1042 4.202172 TGAATTATGTGCATGCATGGAAGG 60.202 41.667 25.64 2.48 0.00 3.46
1008 1043 2.440517 TATGTGCATGCATGGAAGGT 57.559 45.000 25.64 15.85 0.00 3.50
1009 1044 1.563924 ATGTGCATGCATGGAAGGTT 58.436 45.000 25.64 8.06 0.00 3.50
1010 1045 1.340088 TGTGCATGCATGGAAGGTTT 58.660 45.000 25.64 0.00 0.00 3.27
1011 1046 2.523245 TGTGCATGCATGGAAGGTTTA 58.477 42.857 25.64 5.74 0.00 2.01
1012 1047 3.098377 TGTGCATGCATGGAAGGTTTAT 58.902 40.909 25.64 0.00 0.00 1.40
1013 1048 3.130869 TGTGCATGCATGGAAGGTTTATC 59.869 43.478 25.64 11.06 0.00 1.75
1014 1049 3.382546 GTGCATGCATGGAAGGTTTATCT 59.617 43.478 25.64 0.00 0.00 1.98
1015 1050 4.025360 TGCATGCATGGAAGGTTTATCTT 58.975 39.130 27.34 0.00 0.00 2.40
1016 1051 4.467082 TGCATGCATGGAAGGTTTATCTTT 59.533 37.500 27.34 0.00 0.00 2.52
1017 1052 5.045872 GCATGCATGGAAGGTTTATCTTTC 58.954 41.667 27.34 1.60 0.00 2.62
1018 1053 5.163478 GCATGCATGGAAGGTTTATCTTTCT 60.163 40.000 27.34 0.00 33.47 2.52
1019 1054 6.501781 CATGCATGGAAGGTTTATCTTTCTC 58.498 40.000 19.40 0.00 33.47 2.87
1020 1055 4.949856 TGCATGGAAGGTTTATCTTTCTCC 59.050 41.667 0.00 0.00 33.47 3.71
1021 1056 4.949856 GCATGGAAGGTTTATCTTTCTCCA 59.050 41.667 0.00 0.00 33.47 3.86
1022 1057 5.595952 GCATGGAAGGTTTATCTTTCTCCAT 59.404 40.000 0.00 0.00 32.47 3.41
1023 1058 6.238869 GCATGGAAGGTTTATCTTTCTCCATC 60.239 42.308 0.00 0.00 30.93 3.51
1024 1059 5.755849 TGGAAGGTTTATCTTTCTCCATCC 58.244 41.667 0.00 0.00 36.82 3.51
1025 1060 5.252863 TGGAAGGTTTATCTTTCTCCATCCA 59.747 40.000 0.00 0.00 41.62 3.41
1026 1061 5.825151 GGAAGGTTTATCTTTCTCCATCCAG 59.175 44.000 0.00 0.00 36.46 3.86
1027 1062 6.353082 GGAAGGTTTATCTTTCTCCATCCAGA 60.353 42.308 0.00 0.00 36.46 3.86
1028 1063 6.245890 AGGTTTATCTTTCTCCATCCAGAG 57.754 41.667 0.00 0.00 35.04 3.35
1029 1064 5.966935 AGGTTTATCTTTCTCCATCCAGAGA 59.033 40.000 0.00 0.00 41.16 3.10
1036 1071 3.464720 TCTCCATCCAGAGAAGTGAGT 57.535 47.619 0.00 0.00 39.94 3.41
1037 1072 3.784178 TCTCCATCCAGAGAAGTGAGTT 58.216 45.455 0.00 0.00 39.94 3.01
1038 1073 4.935578 TCTCCATCCAGAGAAGTGAGTTA 58.064 43.478 0.00 0.00 39.94 2.24
1039 1074 4.707448 TCTCCATCCAGAGAAGTGAGTTAC 59.293 45.833 0.00 0.00 39.94 2.50
1040 1075 3.769844 TCCATCCAGAGAAGTGAGTTACC 59.230 47.826 0.00 0.00 0.00 2.85
1041 1076 3.515502 CCATCCAGAGAAGTGAGTTACCA 59.484 47.826 0.00 0.00 0.00 3.25
1042 1077 4.382470 CCATCCAGAGAAGTGAGTTACCAG 60.382 50.000 0.00 0.00 0.00 4.00
1043 1078 3.845860 TCCAGAGAAGTGAGTTACCAGT 58.154 45.455 0.00 0.00 0.00 4.00
1044 1079 3.574396 TCCAGAGAAGTGAGTTACCAGTG 59.426 47.826 0.00 0.00 0.00 3.66
1045 1080 3.321497 CAGAGAAGTGAGTTACCAGTGC 58.679 50.000 0.00 0.00 0.00 4.40
1046 1081 2.965831 AGAGAAGTGAGTTACCAGTGCA 59.034 45.455 0.00 0.00 0.00 4.57
1047 1082 3.006323 AGAGAAGTGAGTTACCAGTGCAG 59.994 47.826 0.00 0.00 0.00 4.41
1048 1083 2.965831 AGAAGTGAGTTACCAGTGCAGA 59.034 45.455 0.00 0.00 0.00 4.26
1049 1084 3.580458 AGAAGTGAGTTACCAGTGCAGAT 59.420 43.478 0.00 0.00 0.00 2.90
1050 1085 3.601443 AGTGAGTTACCAGTGCAGATC 57.399 47.619 0.00 0.00 0.00 2.75
1051 1086 2.094494 AGTGAGTTACCAGTGCAGATCG 60.094 50.000 0.00 0.00 0.00 3.69
1052 1087 2.094700 GTGAGTTACCAGTGCAGATCGA 60.095 50.000 0.00 0.00 0.00 3.59
1053 1088 2.094700 TGAGTTACCAGTGCAGATCGAC 60.095 50.000 0.00 0.00 0.00 4.20
1054 1089 1.893137 AGTTACCAGTGCAGATCGACA 59.107 47.619 0.00 0.00 0.00 4.35
1055 1090 2.497675 AGTTACCAGTGCAGATCGACAT 59.502 45.455 0.00 0.00 0.00 3.06
1056 1091 2.584492 TACCAGTGCAGATCGACATG 57.416 50.000 0.00 0.00 0.00 3.21
1057 1092 0.107993 ACCAGTGCAGATCGACATGG 60.108 55.000 0.00 13.05 0.00 3.66
1058 1093 0.176449 CCAGTGCAGATCGACATGGA 59.824 55.000 0.00 0.00 0.00 3.41
1059 1094 1.202615 CCAGTGCAGATCGACATGGAT 60.203 52.381 0.00 0.00 0.00 3.41
1060 1095 2.558378 CAGTGCAGATCGACATGGATT 58.442 47.619 0.00 0.00 0.00 3.01
1061 1096 2.543012 CAGTGCAGATCGACATGGATTC 59.457 50.000 0.00 0.00 0.00 2.52
1062 1097 2.433604 AGTGCAGATCGACATGGATTCT 59.566 45.455 0.00 0.00 0.00 2.40
1063 1098 3.638627 AGTGCAGATCGACATGGATTCTA 59.361 43.478 0.00 0.00 0.00 2.10
1064 1099 4.282957 AGTGCAGATCGACATGGATTCTAT 59.717 41.667 0.00 0.00 0.00 1.98
1065 1100 5.478332 AGTGCAGATCGACATGGATTCTATA 59.522 40.000 0.00 0.00 0.00 1.31
1066 1101 6.015095 AGTGCAGATCGACATGGATTCTATAA 60.015 38.462 0.00 0.00 0.00 0.98
1067 1102 6.815641 GTGCAGATCGACATGGATTCTATAAT 59.184 38.462 0.00 0.00 0.00 1.28
1068 1103 7.332926 GTGCAGATCGACATGGATTCTATAATT 59.667 37.037 0.00 0.00 0.00 1.40
1069 1104 7.332678 TGCAGATCGACATGGATTCTATAATTG 59.667 37.037 0.00 0.00 0.00 2.32
1070 1105 7.675870 GCAGATCGACATGGATTCTATAATTGC 60.676 40.741 0.00 0.00 0.00 3.56
1071 1106 7.332678 CAGATCGACATGGATTCTATAATTGCA 59.667 37.037 0.00 0.00 0.00 4.08
1072 1107 7.548427 AGATCGACATGGATTCTATAATTGCAG 59.452 37.037 0.00 0.00 0.00 4.41
1073 1108 6.524734 TCGACATGGATTCTATAATTGCAGT 58.475 36.000 0.00 0.00 0.00 4.40
1074 1109 6.424812 TCGACATGGATTCTATAATTGCAGTG 59.575 38.462 0.00 0.00 0.00 3.66
1075 1110 6.424812 CGACATGGATTCTATAATTGCAGTGA 59.575 38.462 0.00 0.00 0.00 3.41
1076 1111 7.041848 CGACATGGATTCTATAATTGCAGTGAA 60.042 37.037 0.00 0.00 0.00 3.18
1077 1112 8.523915 ACATGGATTCTATAATTGCAGTGAAA 57.476 30.769 0.00 0.00 0.00 2.69
1078 1113 9.139734 ACATGGATTCTATAATTGCAGTGAAAT 57.860 29.630 0.00 0.00 0.00 2.17
1079 1114 9.976511 CATGGATTCTATAATTGCAGTGAAATT 57.023 29.630 13.70 13.70 0.00 1.82
1080 1115 9.976511 ATGGATTCTATAATTGCAGTGAAATTG 57.023 29.630 18.00 3.08 0.00 2.32
1081 1116 9.187996 TGGATTCTATAATTGCAGTGAAATTGA 57.812 29.630 18.00 5.33 0.00 2.57
1085 1120 8.750515 TCTATAATTGCAGTGAAATTGATCCA 57.249 30.769 18.00 0.00 0.00 3.41
1086 1121 8.843262 TCTATAATTGCAGTGAAATTGATCCAG 58.157 33.333 18.00 8.30 0.00 3.86
1087 1122 4.730949 ATTGCAGTGAAATTGATCCAGG 57.269 40.909 0.00 0.00 0.00 4.45
1088 1123 1.820519 TGCAGTGAAATTGATCCAGGC 59.179 47.619 0.00 0.00 0.00 4.85
1089 1124 2.097825 GCAGTGAAATTGATCCAGGCT 58.902 47.619 0.00 0.00 0.00 4.58
1090 1125 2.494870 GCAGTGAAATTGATCCAGGCTT 59.505 45.455 0.00 0.00 0.00 4.35
1091 1126 3.428589 GCAGTGAAATTGATCCAGGCTTC 60.429 47.826 0.00 0.00 0.00 3.86
1092 1127 3.760151 CAGTGAAATTGATCCAGGCTTCA 59.240 43.478 0.00 0.00 0.00 3.02
1093 1128 4.015084 AGTGAAATTGATCCAGGCTTCAG 58.985 43.478 0.00 0.00 0.00 3.02
1094 1129 4.012374 GTGAAATTGATCCAGGCTTCAGA 58.988 43.478 0.00 0.00 0.00 3.27
1095 1130 4.096081 GTGAAATTGATCCAGGCTTCAGAG 59.904 45.833 0.00 0.00 0.00 3.35
1096 1131 3.294038 AATTGATCCAGGCTTCAGAGG 57.706 47.619 0.00 0.00 0.00 3.69
1097 1132 1.661463 TTGATCCAGGCTTCAGAGGT 58.339 50.000 0.00 0.00 0.00 3.85
1098 1133 1.661463 TGATCCAGGCTTCAGAGGTT 58.339 50.000 0.00 0.00 0.00 3.50
1099 1134 1.280133 TGATCCAGGCTTCAGAGGTTG 59.720 52.381 0.00 0.00 0.00 3.77
1100 1135 1.556911 GATCCAGGCTTCAGAGGTTGA 59.443 52.381 0.00 0.00 0.00 3.18
1101 1136 0.687354 TCCAGGCTTCAGAGGTTGAC 59.313 55.000 0.00 0.00 34.94 3.18
1102 1137 0.397941 CCAGGCTTCAGAGGTTGACA 59.602 55.000 0.00 0.00 34.94 3.58
1103 1138 1.610102 CCAGGCTTCAGAGGTTGACAG 60.610 57.143 0.00 0.00 34.94 3.51
1104 1139 1.345741 CAGGCTTCAGAGGTTGACAGA 59.654 52.381 0.00 0.00 34.94 3.41
1105 1140 2.027377 CAGGCTTCAGAGGTTGACAGAT 60.027 50.000 0.00 0.00 34.94 2.90
1106 1141 2.235898 AGGCTTCAGAGGTTGACAGATC 59.764 50.000 0.00 0.00 34.94 2.75
1107 1142 2.266554 GCTTCAGAGGTTGACAGATCG 58.733 52.381 0.00 0.00 34.94 3.69
1108 1143 2.886081 CTTCAGAGGTTGACAGATCGG 58.114 52.381 0.00 0.00 34.94 4.18
1109 1144 1.924731 TCAGAGGTTGACAGATCGGT 58.075 50.000 0.00 0.00 0.00 4.69
1110 1145 3.081710 TCAGAGGTTGACAGATCGGTA 57.918 47.619 0.00 0.00 0.00 4.02
1111 1146 3.632333 TCAGAGGTTGACAGATCGGTAT 58.368 45.455 0.00 0.00 0.00 2.73
1112 1147 4.788679 TCAGAGGTTGACAGATCGGTATA 58.211 43.478 0.00 0.00 0.00 1.47
1113 1148 5.386060 TCAGAGGTTGACAGATCGGTATAT 58.614 41.667 0.00 0.00 0.00 0.86
1114 1149 5.833667 TCAGAGGTTGACAGATCGGTATATT 59.166 40.000 0.00 0.00 0.00 1.28
1115 1150 6.016192 TCAGAGGTTGACAGATCGGTATATTC 60.016 42.308 0.00 0.00 0.00 1.75
1116 1151 5.048643 AGAGGTTGACAGATCGGTATATTCG 60.049 44.000 0.00 0.00 0.00 3.34
1117 1152 4.583489 AGGTTGACAGATCGGTATATTCGT 59.417 41.667 0.00 0.00 0.00 3.85
1118 1153 4.916249 GGTTGACAGATCGGTATATTCGTC 59.084 45.833 0.00 0.00 0.00 4.20
1119 1154 5.278364 GGTTGACAGATCGGTATATTCGTCT 60.278 44.000 0.00 0.00 0.00 4.18
1120 1155 6.072838 GGTTGACAGATCGGTATATTCGTCTA 60.073 42.308 0.00 0.00 0.00 2.59
1121 1156 7.361885 GGTTGACAGATCGGTATATTCGTCTAT 60.362 40.741 0.00 0.00 0.00 1.98
1122 1157 7.304919 TGACAGATCGGTATATTCGTCTATC 57.695 40.000 0.00 0.00 0.00 2.08
1123 1158 6.877322 TGACAGATCGGTATATTCGTCTATCA 59.123 38.462 0.00 0.00 0.00 2.15
1124 1159 7.553044 TGACAGATCGGTATATTCGTCTATCAT 59.447 37.037 0.00 0.00 0.00 2.45
1125 1160 7.921787 ACAGATCGGTATATTCGTCTATCATC 58.078 38.462 0.00 0.00 0.00 2.92
1126 1161 7.553044 ACAGATCGGTATATTCGTCTATCATCA 59.447 37.037 0.00 0.00 0.00 3.07
1127 1162 8.398665 CAGATCGGTATATTCGTCTATCATCAA 58.601 37.037 0.00 0.00 0.00 2.57
1128 1163 8.616942 AGATCGGTATATTCGTCTATCATCAAG 58.383 37.037 0.00 0.00 0.00 3.02
1129 1164 7.085052 TCGGTATATTCGTCTATCATCAAGG 57.915 40.000 0.00 0.00 0.00 3.61
1130 1165 6.882678 TCGGTATATTCGTCTATCATCAAGGA 59.117 38.462 0.00 0.00 0.00 3.36
1131 1166 7.065923 TCGGTATATTCGTCTATCATCAAGGAG 59.934 40.741 0.00 0.00 0.00 3.69
1132 1167 7.065923 CGGTATATTCGTCTATCATCAAGGAGA 59.934 40.741 0.00 0.00 0.00 3.71
1133 1168 8.908903 GGTATATTCGTCTATCATCAAGGAGAT 58.091 37.037 0.00 0.00 37.48 2.75
1137 1172 8.642935 ATTCGTCTATCATCAAGGAGATTAGA 57.357 34.615 0.00 0.00 33.72 2.10
1138 1173 8.642935 TTCGTCTATCATCAAGGAGATTAGAT 57.357 34.615 0.00 0.00 31.87 1.98
1139 1174 9.740710 TTCGTCTATCATCAAGGAGATTAGATA 57.259 33.333 0.00 0.00 31.87 1.98
1140 1175 9.913310 TCGTCTATCATCAAGGAGATTAGATAT 57.087 33.333 0.00 0.00 31.87 1.63
1170 1205 9.871238 ATGTCTCTACGTGAAAATTGTATTACT 57.129 29.630 0.00 0.00 0.00 2.24
1171 1206 9.350357 TGTCTCTACGTGAAAATTGTATTACTC 57.650 33.333 0.00 0.00 0.00 2.59
1172 1207 9.350357 GTCTCTACGTGAAAATTGTATTACTCA 57.650 33.333 0.00 0.00 0.00 3.41
1175 1210 9.647797 TCTACGTGAAAATTGTATTACTCATGT 57.352 29.630 0.00 10.76 37.01 3.21
1185 1220 8.798748 ATTGTATTACTCATGTAAGTCGTAGC 57.201 34.615 0.00 0.00 41.33 3.58
1186 1221 6.732154 TGTATTACTCATGTAAGTCGTAGCC 58.268 40.000 0.00 0.00 41.33 3.93
1187 1222 5.847111 ATTACTCATGTAAGTCGTAGCCA 57.153 39.130 0.00 0.00 41.33 4.75
1188 1223 5.648178 TTACTCATGTAAGTCGTAGCCAA 57.352 39.130 0.00 0.00 34.10 4.52
1189 1224 4.530710 ACTCATGTAAGTCGTAGCCAAA 57.469 40.909 0.00 0.00 0.00 3.28
1190 1225 4.890088 ACTCATGTAAGTCGTAGCCAAAA 58.110 39.130 0.00 0.00 0.00 2.44
1191 1226 5.488341 ACTCATGTAAGTCGTAGCCAAAAT 58.512 37.500 0.00 0.00 0.00 1.82
1192 1227 6.636705 ACTCATGTAAGTCGTAGCCAAAATA 58.363 36.000 0.00 0.00 0.00 1.40
1193 1228 7.101054 ACTCATGTAAGTCGTAGCCAAAATAA 58.899 34.615 0.00 0.00 0.00 1.40
1194 1229 7.604927 ACTCATGTAAGTCGTAGCCAAAATAAA 59.395 33.333 0.00 0.00 0.00 1.40
1195 1230 7.970384 TCATGTAAGTCGTAGCCAAAATAAAG 58.030 34.615 0.00 0.00 0.00 1.85
1196 1231 7.604927 TCATGTAAGTCGTAGCCAAAATAAAGT 59.395 33.333 0.00 0.00 0.00 2.66
1197 1232 7.733402 TGTAAGTCGTAGCCAAAATAAAGTT 57.267 32.000 0.00 0.00 0.00 2.66
1198 1233 8.830201 TGTAAGTCGTAGCCAAAATAAAGTTA 57.170 30.769 0.00 0.00 0.00 2.24
1199 1234 8.928733 TGTAAGTCGTAGCCAAAATAAAGTTAG 58.071 33.333 0.00 0.00 0.00 2.34
1200 1235 7.974482 AAGTCGTAGCCAAAATAAAGTTAGT 57.026 32.000 0.00 0.00 0.00 2.24
1201 1236 7.360575 AGTCGTAGCCAAAATAAAGTTAGTG 57.639 36.000 0.00 0.00 0.00 2.74
1202 1237 7.156673 AGTCGTAGCCAAAATAAAGTTAGTGA 58.843 34.615 0.00 0.00 0.00 3.41
1203 1238 7.822822 AGTCGTAGCCAAAATAAAGTTAGTGAT 59.177 33.333 0.00 0.00 0.00 3.06
1204 1239 9.090692 GTCGTAGCCAAAATAAAGTTAGTGATA 57.909 33.333 0.00 0.00 0.00 2.15
1205 1240 9.309516 TCGTAGCCAAAATAAAGTTAGTGATAG 57.690 33.333 0.00 0.00 0.00 2.08
1206 1241 8.062448 CGTAGCCAAAATAAAGTTAGTGATAGC 58.938 37.037 0.00 0.00 0.00 2.97
1207 1242 9.110502 GTAGCCAAAATAAAGTTAGTGATAGCT 57.889 33.333 0.00 0.00 0.00 3.32
1208 1243 8.581253 AGCCAAAATAAAGTTAGTGATAGCTT 57.419 30.769 0.00 0.00 0.00 3.74
1209 1244 9.681062 AGCCAAAATAAAGTTAGTGATAGCTTA 57.319 29.630 0.00 0.00 0.00 3.09
1210 1245 9.937175 GCCAAAATAAAGTTAGTGATAGCTTAG 57.063 33.333 0.00 0.00 0.00 2.18
1211 1246 9.937175 CCAAAATAAAGTTAGTGATAGCTTAGC 57.063 33.333 0.00 0.00 0.00 3.09
1220 1255 8.831550 AGTTAGTGATAGCTTAGCTAAATTTGC 58.168 33.333 18.34 7.44 44.62 3.68
1221 1256 8.831550 GTTAGTGATAGCTTAGCTAAATTTGCT 58.168 33.333 18.34 18.55 44.62 3.91
1222 1257 7.489574 AGTGATAGCTTAGCTAAATTTGCTC 57.510 36.000 18.34 9.58 44.62 4.26
1223 1258 6.201806 AGTGATAGCTTAGCTAAATTTGCTCG 59.798 38.462 18.34 10.74 44.62 5.03
1224 1259 6.018669 GTGATAGCTTAGCTAAATTTGCTCGT 60.019 38.462 18.34 10.63 44.62 4.18
1225 1260 7.169308 GTGATAGCTTAGCTAAATTTGCTCGTA 59.831 37.037 18.34 5.36 44.62 3.43
1226 1261 5.975410 AGCTTAGCTAAATTTGCTCGTAG 57.025 39.130 4.30 12.80 41.46 3.51
1227 1262 5.420409 AGCTTAGCTAAATTTGCTCGTAGT 58.580 37.500 4.30 0.00 41.46 2.73
1228 1263 5.292101 AGCTTAGCTAAATTTGCTCGTAGTG 59.708 40.000 4.30 0.00 41.46 2.74
1229 1264 5.291128 GCTTAGCTAAATTTGCTCGTAGTGA 59.709 40.000 15.39 0.00 41.46 3.41
1230 1265 8.578374 AGCTTAGCTAAATTTGCTCGTAGTGAG 61.578 40.741 4.30 0.00 42.03 3.51
1231 1266 4.184629 AGCTAAATTTGCTCGTAGTGAGG 58.815 43.478 0.00 0.00 45.38 3.86
1232 1267 3.309954 GCTAAATTTGCTCGTAGTGAGGG 59.690 47.826 0.00 0.00 45.38 4.30
1233 1268 3.418684 AAATTTGCTCGTAGTGAGGGT 57.581 42.857 0.00 0.00 45.38 4.34
1234 1269 4.546829 AAATTTGCTCGTAGTGAGGGTA 57.453 40.909 0.00 0.00 45.38 3.69
1235 1270 3.802948 ATTTGCTCGTAGTGAGGGTAG 57.197 47.619 0.00 0.00 45.38 3.18
1236 1271 2.502142 TTGCTCGTAGTGAGGGTAGA 57.498 50.000 0.00 0.00 45.38 2.59
1237 1272 2.502142 TGCTCGTAGTGAGGGTAGAA 57.498 50.000 0.00 0.00 45.38 2.10
1238 1273 2.089980 TGCTCGTAGTGAGGGTAGAAC 58.910 52.381 0.00 0.00 45.38 3.01
1239 1274 1.404748 GCTCGTAGTGAGGGTAGAACC 59.595 57.143 0.00 0.00 45.38 3.62
1240 1275 2.719739 CTCGTAGTGAGGGTAGAACCA 58.280 52.381 0.00 0.00 41.02 3.67
1241 1276 3.288964 CTCGTAGTGAGGGTAGAACCAT 58.711 50.000 0.00 0.00 41.02 3.55
1242 1277 3.021695 TCGTAGTGAGGGTAGAACCATG 58.978 50.000 0.00 0.00 41.02 3.66
1243 1278 3.021695 CGTAGTGAGGGTAGAACCATGA 58.978 50.000 0.00 0.00 41.02 3.07
1244 1279 3.181489 CGTAGTGAGGGTAGAACCATGAC 60.181 52.174 0.00 0.00 41.02 3.06
1245 1280 3.191888 AGTGAGGGTAGAACCATGACT 57.808 47.619 0.00 0.00 41.48 3.41
1246 1281 3.521727 AGTGAGGGTAGAACCATGACTT 58.478 45.455 0.00 0.00 43.67 3.01
1247 1282 3.261897 AGTGAGGGTAGAACCATGACTTG 59.738 47.826 0.00 0.00 43.67 3.16
1248 1283 5.848184 AGTGAGGGTAGAACCATGACTTGG 61.848 50.000 5.84 5.84 43.67 3.61
1258 1293 2.636830 CCATGACTTGGCTAGGTTCTG 58.363 52.381 0.00 0.00 39.09 3.02
1259 1294 2.636830 CATGACTTGGCTAGGTTCTGG 58.363 52.381 0.20 0.00 0.00 3.86
1260 1295 1.729586 TGACTTGGCTAGGTTCTGGT 58.270 50.000 0.20 0.00 0.00 4.00
1261 1296 1.623811 TGACTTGGCTAGGTTCTGGTC 59.376 52.381 0.20 0.00 0.00 4.02
1262 1297 0.984995 ACTTGGCTAGGTTCTGGTCC 59.015 55.000 0.20 0.00 0.00 4.46
1263 1298 1.280457 CTTGGCTAGGTTCTGGTCCT 58.720 55.000 0.00 0.00 38.91 3.85
1264 1299 1.208293 CTTGGCTAGGTTCTGGTCCTC 59.792 57.143 0.00 0.00 36.60 3.71
1265 1300 0.617820 TGGCTAGGTTCTGGTCCTCC 60.618 60.000 0.00 0.00 36.60 4.30
1266 1301 0.325765 GGCTAGGTTCTGGTCCTCCT 60.326 60.000 0.00 0.00 36.60 3.69
1267 1302 0.827368 GCTAGGTTCTGGTCCTCCTG 59.173 60.000 0.00 0.00 36.60 3.86
1268 1303 1.619977 GCTAGGTTCTGGTCCTCCTGA 60.620 57.143 0.00 0.00 39.38 3.86
1269 1304 2.383855 CTAGGTTCTGGTCCTCCTGAG 58.616 57.143 0.00 0.00 41.46 3.35
1279 1314 3.256281 CCTCCTGAGGCTTTGGAAC 57.744 57.895 0.00 0.00 42.44 3.62
1280 1315 0.695347 CCTCCTGAGGCTTTGGAACT 59.305 55.000 0.00 0.00 42.44 3.01
1281 1316 1.909302 CCTCCTGAGGCTTTGGAACTA 59.091 52.381 0.00 0.00 42.44 2.24
1282 1317 2.093235 CCTCCTGAGGCTTTGGAACTAG 60.093 54.545 0.00 0.00 42.44 2.57
1283 1318 1.279271 TCCTGAGGCTTTGGAACTAGC 59.721 52.381 6.91 0.00 36.32 3.42
1284 1319 1.280421 CCTGAGGCTTTGGAACTAGCT 59.720 52.381 0.00 0.00 37.02 3.32
1285 1320 2.354259 CTGAGGCTTTGGAACTAGCTG 58.646 52.381 0.00 0.00 37.02 4.24
1286 1321 1.090728 GAGGCTTTGGAACTAGCTGC 58.909 55.000 0.00 0.00 37.02 5.25
1287 1322 0.674895 AGGCTTTGGAACTAGCTGCG 60.675 55.000 0.00 0.00 37.02 5.18
1288 1323 0.673644 GGCTTTGGAACTAGCTGCGA 60.674 55.000 0.00 0.00 37.02 5.10
1289 1324 1.373570 GCTTTGGAACTAGCTGCGAT 58.626 50.000 0.00 0.00 34.74 4.58
1290 1325 1.740025 GCTTTGGAACTAGCTGCGATT 59.260 47.619 0.00 0.00 34.74 3.34
1291 1326 2.476854 GCTTTGGAACTAGCTGCGATTG 60.477 50.000 0.00 0.00 34.74 2.67
1292 1327 2.760634 TTGGAACTAGCTGCGATTGA 57.239 45.000 0.00 0.00 0.00 2.57
1293 1328 2.988010 TGGAACTAGCTGCGATTGAT 57.012 45.000 0.00 0.00 0.00 2.57
1294 1329 3.266510 TGGAACTAGCTGCGATTGATT 57.733 42.857 0.00 0.00 0.00 2.57
1295 1330 2.938451 TGGAACTAGCTGCGATTGATTG 59.062 45.455 0.00 0.00 0.00 2.67
1296 1331 2.939103 GGAACTAGCTGCGATTGATTGT 59.061 45.455 0.00 0.00 0.00 2.71
1297 1332 4.119862 GGAACTAGCTGCGATTGATTGTA 58.880 43.478 0.00 0.00 0.00 2.41
1298 1333 4.570772 GGAACTAGCTGCGATTGATTGTAA 59.429 41.667 0.00 0.00 0.00 2.41
1299 1334 5.277058 GGAACTAGCTGCGATTGATTGTAAG 60.277 44.000 0.00 0.00 0.00 2.34
1300 1335 4.122776 ACTAGCTGCGATTGATTGTAAGG 58.877 43.478 0.00 0.00 0.00 2.69
1301 1336 3.266510 AGCTGCGATTGATTGTAAGGA 57.733 42.857 0.00 0.00 0.00 3.36
1302 1337 2.939103 AGCTGCGATTGATTGTAAGGAC 59.061 45.455 0.00 0.00 0.00 3.85
1303 1338 2.939103 GCTGCGATTGATTGTAAGGACT 59.061 45.455 0.00 0.00 0.00 3.85
1304 1339 3.375299 GCTGCGATTGATTGTAAGGACTT 59.625 43.478 0.00 0.00 0.00 3.01
1305 1340 4.142600 GCTGCGATTGATTGTAAGGACTTT 60.143 41.667 0.00 0.00 0.00 2.66
1306 1341 5.295431 TGCGATTGATTGTAAGGACTTTG 57.705 39.130 0.00 0.00 0.00 2.77
1307 1342 4.155826 TGCGATTGATTGTAAGGACTTTGG 59.844 41.667 0.00 0.00 0.00 3.28
1308 1343 4.156008 GCGATTGATTGTAAGGACTTTGGT 59.844 41.667 0.00 0.00 0.00 3.67
1309 1344 5.631026 CGATTGATTGTAAGGACTTTGGTG 58.369 41.667 0.00 0.00 0.00 4.17
1310 1345 5.391950 CGATTGATTGTAAGGACTTTGGTGG 60.392 44.000 0.00 0.00 0.00 4.61
1311 1346 4.715534 TGATTGTAAGGACTTTGGTGGA 57.284 40.909 0.00 0.00 0.00 4.02
1312 1347 5.255397 TGATTGTAAGGACTTTGGTGGAT 57.745 39.130 0.00 0.00 0.00 3.41
1313 1348 5.009631 TGATTGTAAGGACTTTGGTGGATG 58.990 41.667 0.00 0.00 0.00 3.51
1314 1349 4.715534 TTGTAAGGACTTTGGTGGATGA 57.284 40.909 0.00 0.00 0.00 2.92
1315 1350 4.286297 TGTAAGGACTTTGGTGGATGAG 57.714 45.455 0.00 0.00 0.00 2.90
1316 1351 3.650942 TGTAAGGACTTTGGTGGATGAGT 59.349 43.478 0.00 0.00 0.00 3.41
1317 1352 4.841813 TGTAAGGACTTTGGTGGATGAGTA 59.158 41.667 0.00 0.00 0.00 2.59
1318 1353 4.993705 AAGGACTTTGGTGGATGAGTAA 57.006 40.909 0.00 0.00 0.00 2.24
1319 1354 5.520748 AAGGACTTTGGTGGATGAGTAAT 57.479 39.130 0.00 0.00 0.00 1.89
1320 1355 6.636454 AAGGACTTTGGTGGATGAGTAATA 57.364 37.500 0.00 0.00 0.00 0.98
1321 1356 5.990668 AGGACTTTGGTGGATGAGTAATAC 58.009 41.667 0.00 0.00 0.00 1.89
1322 1357 5.487488 AGGACTTTGGTGGATGAGTAATACA 59.513 40.000 0.00 0.00 0.00 2.29
1323 1358 6.012858 AGGACTTTGGTGGATGAGTAATACAA 60.013 38.462 0.00 0.00 27.92 2.41
1324 1359 6.657541 GGACTTTGGTGGATGAGTAATACAAA 59.342 38.462 0.00 0.00 27.92 2.83
1325 1360 7.339466 GGACTTTGGTGGATGAGTAATACAAAT 59.661 37.037 0.00 0.00 27.92 2.32
1326 1361 8.650143 ACTTTGGTGGATGAGTAATACAAATT 57.350 30.769 0.00 0.00 27.92 1.82
1327 1362 9.088987 ACTTTGGTGGATGAGTAATACAAATTT 57.911 29.630 0.00 0.00 27.92 1.82
1328 1363 9.573133 CTTTGGTGGATGAGTAATACAAATTTC 57.427 33.333 0.00 0.00 27.92 2.17
1329 1364 8.877864 TTGGTGGATGAGTAATACAAATTTCT 57.122 30.769 0.00 0.00 27.92 2.52
1330 1365 9.967451 TTGGTGGATGAGTAATACAAATTTCTA 57.033 29.630 0.00 0.00 27.92 2.10
1331 1366 9.391006 TGGTGGATGAGTAATACAAATTTCTAC 57.609 33.333 0.00 0.00 27.92 2.59
1332 1367 8.837389 GGTGGATGAGTAATACAAATTTCTACC 58.163 37.037 0.00 0.00 27.92 3.18
1333 1368 8.837389 GTGGATGAGTAATACAAATTTCTACCC 58.163 37.037 0.00 0.00 27.92 3.69
1334 1369 7.713507 TGGATGAGTAATACAAATTTCTACCCG 59.286 37.037 0.00 0.00 0.00 5.28
1335 1370 6.913873 TGAGTAATACAAATTTCTACCCGC 57.086 37.500 0.00 0.00 0.00 6.13
1336 1371 6.408035 TGAGTAATACAAATTTCTACCCGCA 58.592 36.000 0.00 0.00 0.00 5.69
1337 1372 6.879993 TGAGTAATACAAATTTCTACCCGCAA 59.120 34.615 0.00 0.00 0.00 4.85
1338 1373 7.390996 TGAGTAATACAAATTTCTACCCGCAAA 59.609 33.333 0.00 0.00 0.00 3.68
1339 1374 8.113173 AGTAATACAAATTTCTACCCGCAAAA 57.887 30.769 0.00 0.00 0.00 2.44
1340 1375 8.578151 AGTAATACAAATTTCTACCCGCAAAAA 58.422 29.630 0.00 0.00 0.00 1.94
1399 1434 0.370273 CCGACAGAACTATTGCACGC 59.630 55.000 0.00 0.00 0.00 5.34
1406 1441 3.124270 CTATTGCACGCACCCGCA 61.124 61.111 0.00 0.00 38.40 5.69
1493 2740 1.135972 GCATGTGTGTTTCGGCAGTAG 60.136 52.381 0.00 0.00 0.00 2.57
1494 2741 1.135972 CATGTGTGTTTCGGCAGTAGC 60.136 52.381 0.00 0.00 41.10 3.58
1495 2742 0.179070 TGTGTGTTTCGGCAGTAGCA 60.179 50.000 0.00 0.00 44.61 3.49
1496 2743 0.512952 GTGTGTTTCGGCAGTAGCAG 59.487 55.000 0.00 0.00 44.61 4.24
1497 2744 0.105964 TGTGTTTCGGCAGTAGCAGT 59.894 50.000 0.00 0.00 44.61 4.40
1498 2745 1.341852 TGTGTTTCGGCAGTAGCAGTA 59.658 47.619 0.00 0.00 44.61 2.74
1542 2789 1.303799 CCTGGCAAGCTAGCACTGTG 61.304 60.000 18.83 10.17 35.83 3.66
1543 2790 1.919956 CTGGCAAGCTAGCACTGTGC 61.920 60.000 24.59 24.59 45.46 4.57
1606 2853 7.833285 AGGTTTTGTAAATACTGTTGTGGAT 57.167 32.000 0.00 0.00 0.00 3.41
1616 2863 4.019792 ACTGTTGTGGATATGAGTTGCA 57.980 40.909 0.00 0.00 0.00 4.08
1641 2888 1.888436 ATCGACTGGCGGCTTCAAGA 61.888 55.000 11.43 3.87 41.33 3.02
1785 3032 9.745880 ATTAGCTATATTCGAACCATATTACGG 57.254 33.333 0.00 0.00 0.00 4.02
1801 3048 3.727146 GGTGACGGTGACACAACC 58.273 61.111 8.08 5.66 39.65 3.77
1802 3049 1.145377 GGTGACGGTGACACAACCT 59.855 57.895 8.08 0.00 39.65 3.50
1803 3050 0.878961 GGTGACGGTGACACAACCTC 60.879 60.000 8.08 0.00 39.65 3.85
1814 3062 4.759693 GTGACACAACCTCCAATATGTTCA 59.240 41.667 0.00 0.00 0.00 3.18
1819 3067 4.761739 ACAACCTCCAATATGTTCACACAG 59.238 41.667 0.00 0.00 35.94 3.66
1840 3088 4.098960 CAGTGGCCTTATCATTCATGCTTT 59.901 41.667 3.32 0.00 0.00 3.51
1841 3089 4.713321 AGTGGCCTTATCATTCATGCTTTT 59.287 37.500 3.32 0.00 0.00 2.27
1922 3170 7.775397 ATTGCTATTGCCATTGTTATTTCAC 57.225 32.000 0.00 0.00 38.71 3.18
1951 3199 1.732941 TTATGCAATTCGTCCGTGCT 58.267 45.000 0.00 0.00 39.09 4.40
2005 3253 7.397221 TGGTTTCATAATCTCACTCATGTCTT 58.603 34.615 0.00 0.00 0.00 3.01
2065 3313 1.134401 ACGCACACCCTTCAGATATGG 60.134 52.381 0.00 0.00 0.00 2.74
2079 3327 7.890127 CCTTCAGATATGGAAAAATATAGGCCA 59.110 37.037 5.01 0.00 0.00 5.36
2162 3410 7.121907 TGCTGATGCATTACAATTTACAGGTTA 59.878 33.333 0.00 0.00 45.31 2.85
2213 3461 4.745837 GCAATTCTCATGCATACTCCTC 57.254 45.455 0.00 0.00 43.29 3.71
2214 3462 3.501445 GCAATTCTCATGCATACTCCTCC 59.499 47.826 0.00 0.00 43.29 4.30
2238 3486 8.276477 TCCCCGGAAATTATACTTAACAATCTT 58.724 33.333 0.73 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 0.250338 GGATGACGGATGGTAAGGCC 60.250 60.000 0.00 0.00 37.90 5.19
5 6 0.600255 CGGATGACGGATGGTAAGGC 60.600 60.000 0.00 0.00 39.42 4.35
6 7 3.588277 CGGATGACGGATGGTAAGG 57.412 57.895 0.00 0.00 39.42 2.69
17 18 2.589798 TACGGATGGAAACGGATGAC 57.410 50.000 0.00 0.00 0.00 3.06
28 29 7.417612 CAGAAAAGTCCATAATTTACGGATGG 58.582 38.462 0.00 0.00 41.36 3.51
49 50 3.333029 TGATGCGTCTTCATTCCAGAA 57.667 42.857 7.58 0.00 0.00 3.02
68 69 1.419387 GGGAGGATGGTGGAGAAGATG 59.581 57.143 0.00 0.00 0.00 2.90
196 197 0.455005 TGACTGCTCAGAGCGAGATG 59.545 55.000 21.71 11.35 46.26 2.90
211 212 2.359107 CGGCACAGCACCATGACT 60.359 61.111 0.00 0.00 0.00 3.41
271 287 2.672651 TGGGTCGGCAGCAACATG 60.673 61.111 0.00 0.00 0.00 3.21
291 307 0.106149 AATTACGGTGATCGGAGGGC 59.894 55.000 0.00 0.00 44.45 5.19
296 312 4.552767 GCTCAAATCAATTACGGTGATCGG 60.553 45.833 0.00 0.00 44.45 4.18
306 322 3.953612 AGATTGCGGGCTCAAATCAATTA 59.046 39.130 10.70 0.00 0.00 1.40
359 375 2.825836 CACGAGGATTGGGCCAGC 60.826 66.667 6.23 2.72 0.00 4.85
426 442 1.153349 GGAGATGTTGGCGGAGGAC 60.153 63.158 0.00 0.00 0.00 3.85
433 449 0.895100 TTGGTGCAGGAGATGTTGGC 60.895 55.000 0.00 0.00 0.00 4.52
437 453 1.915141 CCTTTTGGTGCAGGAGATGT 58.085 50.000 0.00 0.00 30.81 3.06
452 468 0.321996 GAAGGAGAGCACCGACCTTT 59.678 55.000 0.00 0.00 41.90 3.11
453 469 0.543174 AGAAGGAGAGCACCGACCTT 60.543 55.000 0.00 0.00 44.08 3.50
458 474 2.552315 GAGATAGAGAAGGAGAGCACCG 59.448 54.545 0.00 0.00 34.73 4.94
463 479 3.893753 TGGGGAGATAGAGAAGGAGAG 57.106 52.381 0.00 0.00 0.00 3.20
464 480 4.626942 TTTGGGGAGATAGAGAAGGAGA 57.373 45.455 0.00 0.00 0.00 3.71
511 532 6.661304 AAATCAGAGCTTCAAAGTTCCAAT 57.339 33.333 3.34 0.00 37.00 3.16
521 542 6.327365 TCCTCCACATATAAATCAGAGCTTCA 59.673 38.462 0.00 0.00 0.00 3.02
593 615 2.279851 TGACCGGACTGTTGCACG 60.280 61.111 9.46 0.00 0.00 5.34
599 621 1.705873 AGAAAGACTGACCGGACTGT 58.294 50.000 15.57 15.57 0.00 3.55
710 732 6.072728 CGTTGTTCCATCTGTTTATTCCTTCA 60.073 38.462 0.00 0.00 0.00 3.02
751 773 3.810941 ACGAAGAGAGATGACTACGATCC 59.189 47.826 0.00 0.00 0.00 3.36
752 774 5.412526 AACGAAGAGAGATGACTACGATC 57.587 43.478 0.00 0.00 0.00 3.69
753 775 5.821516 AAACGAAGAGAGATGACTACGAT 57.178 39.130 0.00 0.00 0.00 3.73
754 776 5.048921 ACAAAACGAAGAGAGATGACTACGA 60.049 40.000 0.00 0.00 0.00 3.43
755 777 5.154932 ACAAAACGAAGAGAGATGACTACG 58.845 41.667 0.00 0.00 0.00 3.51
756 778 7.409465 AAACAAAACGAAGAGAGATGACTAC 57.591 36.000 0.00 0.00 0.00 2.73
757 779 9.706691 ATAAAACAAAACGAAGAGAGATGACTA 57.293 29.630 0.00 0.00 0.00 2.59
758 780 6.927294 AAAACAAAACGAAGAGAGATGACT 57.073 33.333 0.00 0.00 0.00 3.41
759 781 8.283291 ACATAAAACAAAACGAAGAGAGATGAC 58.717 33.333 0.00 0.00 0.00 3.06
760 782 8.378172 ACATAAAACAAAACGAAGAGAGATGA 57.622 30.769 0.00 0.00 0.00 2.92
763 785 8.770828 CCTTACATAAAACAAAACGAAGAGAGA 58.229 33.333 0.00 0.00 0.00 3.10
764 786 7.534239 GCCTTACATAAAACAAAACGAAGAGAG 59.466 37.037 0.00 0.00 0.00 3.20
765 787 7.357303 GCCTTACATAAAACAAAACGAAGAGA 58.643 34.615 0.00 0.00 0.00 3.10
766 788 6.302313 CGCCTTACATAAAACAAAACGAAGAG 59.698 38.462 0.00 0.00 0.00 2.85
767 789 6.137415 CGCCTTACATAAAACAAAACGAAGA 58.863 36.000 0.00 0.00 0.00 2.87
768 790 5.164225 GCGCCTTACATAAAACAAAACGAAG 60.164 40.000 0.00 0.00 0.00 3.79
769 791 4.676018 GCGCCTTACATAAAACAAAACGAA 59.324 37.500 0.00 0.00 0.00 3.85
770 792 4.023878 AGCGCCTTACATAAAACAAAACGA 60.024 37.500 2.29 0.00 0.00 3.85
771 793 4.087930 CAGCGCCTTACATAAAACAAAACG 59.912 41.667 2.29 0.00 0.00 3.60
772 794 5.216648 TCAGCGCCTTACATAAAACAAAAC 58.783 37.500 2.29 0.00 0.00 2.43
773 795 5.440234 TCAGCGCCTTACATAAAACAAAA 57.560 34.783 2.29 0.00 0.00 2.44
774 796 5.637006 ATCAGCGCCTTACATAAAACAAA 57.363 34.783 2.29 0.00 0.00 2.83
775 797 5.398169 CAATCAGCGCCTTACATAAAACAA 58.602 37.500 2.29 0.00 0.00 2.83
776 798 4.142491 CCAATCAGCGCCTTACATAAAACA 60.142 41.667 2.29 0.00 0.00 2.83
777 799 4.095782 TCCAATCAGCGCCTTACATAAAAC 59.904 41.667 2.29 0.00 0.00 2.43
778 800 4.095782 GTCCAATCAGCGCCTTACATAAAA 59.904 41.667 2.29 0.00 0.00 1.52
779 801 3.625764 GTCCAATCAGCGCCTTACATAAA 59.374 43.478 2.29 0.00 0.00 1.40
780 802 3.202906 GTCCAATCAGCGCCTTACATAA 58.797 45.455 2.29 0.00 0.00 1.90
781 803 2.801699 CGTCCAATCAGCGCCTTACATA 60.802 50.000 2.29 0.00 0.00 2.29
782 804 1.668419 GTCCAATCAGCGCCTTACAT 58.332 50.000 2.29 0.00 0.00 2.29
783 805 0.739462 CGTCCAATCAGCGCCTTACA 60.739 55.000 2.29 0.00 0.00 2.41
784 806 1.429148 CCGTCCAATCAGCGCCTTAC 61.429 60.000 2.29 0.00 0.00 2.34
785 807 1.153449 CCGTCCAATCAGCGCCTTA 60.153 57.895 2.29 0.00 0.00 2.69
786 808 2.436646 CCGTCCAATCAGCGCCTT 60.437 61.111 2.29 0.00 0.00 4.35
787 809 2.257409 ATTCCGTCCAATCAGCGCCT 62.257 55.000 2.29 0.00 0.00 5.52
913 948 9.591792 GAATATGCCTTAAGAAAAATCAAAGCT 57.408 29.630 3.36 0.00 0.00 3.74
926 961 7.158021 CCTACAGGAAGAGAATATGCCTTAAG 58.842 42.308 0.00 0.00 37.39 1.85
927 962 6.464465 GCCTACAGGAAGAGAATATGCCTTAA 60.464 42.308 0.00 0.00 37.39 1.85
928 963 5.012148 GCCTACAGGAAGAGAATATGCCTTA 59.988 44.000 0.00 0.00 37.39 2.69
929 964 4.202409 GCCTACAGGAAGAGAATATGCCTT 60.202 45.833 0.00 0.00 37.39 4.35
930 965 3.326297 GCCTACAGGAAGAGAATATGCCT 59.674 47.826 0.00 0.00 37.39 4.75
931 966 3.071602 TGCCTACAGGAAGAGAATATGCC 59.928 47.826 0.00 0.00 37.39 4.40
932 967 4.314121 CTGCCTACAGGAAGAGAATATGC 58.686 47.826 0.00 0.00 44.07 3.14
960 995 0.033228 CAAGTGCATCCCGGCAAAAA 59.967 50.000 0.00 0.00 46.93 1.94
961 996 0.825425 TCAAGTGCATCCCGGCAAAA 60.825 50.000 0.00 0.00 46.93 2.44
962 997 0.825425 TTCAAGTGCATCCCGGCAAA 60.825 50.000 0.00 0.00 46.93 3.68
963 998 1.228398 TTCAAGTGCATCCCGGCAA 60.228 52.632 0.00 0.00 46.93 4.52
964 999 1.675310 CTTCAAGTGCATCCCGGCA 60.675 57.895 0.00 0.00 42.53 5.69
965 1000 3.056313 GCTTCAAGTGCATCCCGGC 62.056 63.158 0.00 0.00 0.00 6.13
966 1001 1.377725 AGCTTCAAGTGCATCCCGG 60.378 57.895 0.00 0.00 0.00 5.73
967 1002 0.674581 TCAGCTTCAAGTGCATCCCG 60.675 55.000 0.00 0.00 0.00 5.14
968 1003 1.538047 TTCAGCTTCAAGTGCATCCC 58.462 50.000 0.00 0.00 0.00 3.85
969 1004 3.863142 AATTCAGCTTCAAGTGCATCC 57.137 42.857 0.00 0.00 0.00 3.51
970 1005 5.742453 CACATAATTCAGCTTCAAGTGCATC 59.258 40.000 0.00 0.00 0.00 3.91
971 1006 5.647589 CACATAATTCAGCTTCAAGTGCAT 58.352 37.500 0.00 0.00 0.00 3.96
972 1007 4.616604 GCACATAATTCAGCTTCAAGTGCA 60.617 41.667 13.95 0.00 46.42 4.57
973 1008 3.855950 GCACATAATTCAGCTTCAAGTGC 59.144 43.478 0.00 0.00 42.21 4.40
974 1009 5.050644 TGCACATAATTCAGCTTCAAGTG 57.949 39.130 0.00 0.00 0.00 3.16
975 1010 5.647589 CATGCACATAATTCAGCTTCAAGT 58.352 37.500 0.00 0.00 0.00 3.16
976 1011 4.503007 GCATGCACATAATTCAGCTTCAAG 59.497 41.667 14.21 0.00 0.00 3.02
977 1012 4.082136 TGCATGCACATAATTCAGCTTCAA 60.082 37.500 18.46 0.00 0.00 2.69
978 1013 3.444388 TGCATGCACATAATTCAGCTTCA 59.556 39.130 18.46 0.00 0.00 3.02
979 1014 4.036567 TGCATGCACATAATTCAGCTTC 57.963 40.909 18.46 0.00 0.00 3.86
980 1015 4.368315 CATGCATGCACATAATTCAGCTT 58.632 39.130 25.37 0.00 0.00 3.74
981 1016 3.243737 CCATGCATGCACATAATTCAGCT 60.244 43.478 25.37 0.00 0.00 4.24
982 1017 3.057019 CCATGCATGCACATAATTCAGC 58.943 45.455 25.37 0.00 0.00 4.26
983 1018 4.577834 TCCATGCATGCACATAATTCAG 57.422 40.909 25.37 4.07 0.00 3.02
984 1019 4.202172 CCTTCCATGCATGCACATAATTCA 60.202 41.667 25.37 0.00 0.00 2.57
985 1020 4.202182 ACCTTCCATGCATGCACATAATTC 60.202 41.667 25.37 0.00 0.00 2.17
986 1021 3.707611 ACCTTCCATGCATGCACATAATT 59.292 39.130 25.37 2.19 0.00 1.40
987 1022 3.302161 ACCTTCCATGCATGCACATAAT 58.698 40.909 25.37 3.10 0.00 1.28
988 1023 2.737544 ACCTTCCATGCATGCACATAA 58.262 42.857 25.37 15.58 0.00 1.90
989 1024 2.440517 ACCTTCCATGCATGCACATA 57.559 45.000 25.37 8.16 0.00 2.29
990 1025 1.563924 AACCTTCCATGCATGCACAT 58.436 45.000 25.37 4.95 0.00 3.21
991 1026 1.340088 AAACCTTCCATGCATGCACA 58.660 45.000 25.37 7.17 0.00 4.57
992 1027 3.382546 AGATAAACCTTCCATGCATGCAC 59.617 43.478 25.37 5.17 0.00 4.57
993 1028 3.634504 AGATAAACCTTCCATGCATGCA 58.365 40.909 25.04 25.04 0.00 3.96
994 1029 4.660789 AAGATAAACCTTCCATGCATGC 57.339 40.909 21.69 11.82 0.00 4.06
995 1030 6.460676 GGAGAAAGATAAACCTTCCATGCATG 60.461 42.308 20.19 20.19 0.00 4.06
996 1031 5.595952 GGAGAAAGATAAACCTTCCATGCAT 59.404 40.000 0.00 0.00 0.00 3.96
997 1032 4.949856 GGAGAAAGATAAACCTTCCATGCA 59.050 41.667 0.00 0.00 0.00 3.96
998 1033 4.949856 TGGAGAAAGATAAACCTTCCATGC 59.050 41.667 0.00 0.00 0.00 4.06
999 1034 6.264067 GGATGGAGAAAGATAAACCTTCCATG 59.736 42.308 7.76 0.00 41.51 3.66
1000 1035 6.068853 TGGATGGAGAAAGATAAACCTTCCAT 60.069 38.462 0.00 2.96 44.34 3.41
1001 1036 5.252863 TGGATGGAGAAAGATAAACCTTCCA 59.747 40.000 0.00 0.00 45.79 3.53
1002 1037 5.755849 TGGATGGAGAAAGATAAACCTTCC 58.244 41.667 0.00 0.00 41.93 3.46
1003 1038 6.653989 TCTGGATGGAGAAAGATAAACCTTC 58.346 40.000 0.00 0.00 0.00 3.46
1004 1039 6.445139 TCTCTGGATGGAGAAAGATAAACCTT 59.555 38.462 0.00 0.00 39.13 3.50
1005 1040 5.966935 TCTCTGGATGGAGAAAGATAAACCT 59.033 40.000 0.00 0.00 39.13 3.50
1006 1041 6.240549 TCTCTGGATGGAGAAAGATAAACC 57.759 41.667 0.00 0.00 39.13 3.27
1015 1050 3.784178 ACTCACTTCTCTGGATGGAGAA 58.216 45.455 6.73 6.73 46.22 2.87
1016 1051 3.464720 ACTCACTTCTCTGGATGGAGA 57.535 47.619 0.00 0.00 40.16 3.71
1017 1052 4.142049 GGTAACTCACTTCTCTGGATGGAG 60.142 50.000 0.00 0.00 34.88 3.86
1018 1053 3.769844 GGTAACTCACTTCTCTGGATGGA 59.230 47.826 0.00 0.00 0.00 3.41
1019 1054 3.515502 TGGTAACTCACTTCTCTGGATGG 59.484 47.826 0.00 0.00 37.61 3.51
1020 1055 4.221703 ACTGGTAACTCACTTCTCTGGATG 59.778 45.833 0.00 0.00 37.61 3.51
1021 1056 4.221703 CACTGGTAACTCACTTCTCTGGAT 59.778 45.833 0.00 0.00 37.61 3.41
1022 1057 3.574396 CACTGGTAACTCACTTCTCTGGA 59.426 47.826 0.00 0.00 37.61 3.86
1023 1058 3.862642 GCACTGGTAACTCACTTCTCTGG 60.863 52.174 0.00 0.00 37.61 3.86
1024 1059 3.243873 TGCACTGGTAACTCACTTCTCTG 60.244 47.826 0.00 0.00 37.61 3.35
1025 1060 2.965831 TGCACTGGTAACTCACTTCTCT 59.034 45.455 0.00 0.00 37.61 3.10
1026 1061 3.005897 TCTGCACTGGTAACTCACTTCTC 59.994 47.826 0.00 0.00 37.61 2.87
1027 1062 2.965831 TCTGCACTGGTAACTCACTTCT 59.034 45.455 0.00 0.00 37.61 2.85
1028 1063 3.386768 TCTGCACTGGTAACTCACTTC 57.613 47.619 0.00 0.00 37.61 3.01
1029 1064 3.615110 CGATCTGCACTGGTAACTCACTT 60.615 47.826 0.00 0.00 37.61 3.16
1030 1065 2.094494 CGATCTGCACTGGTAACTCACT 60.094 50.000 0.00 0.00 37.61 3.41
1031 1066 2.094700 TCGATCTGCACTGGTAACTCAC 60.095 50.000 0.00 0.00 37.61 3.51
1032 1067 2.094700 GTCGATCTGCACTGGTAACTCA 60.095 50.000 0.00 0.00 37.61 3.41
1033 1068 2.094700 TGTCGATCTGCACTGGTAACTC 60.095 50.000 0.00 0.00 37.61 3.01
1034 1069 1.893137 TGTCGATCTGCACTGGTAACT 59.107 47.619 0.00 0.00 37.61 2.24
1035 1070 2.363788 TGTCGATCTGCACTGGTAAC 57.636 50.000 0.00 0.00 0.00 2.50
1036 1071 2.418609 CCATGTCGATCTGCACTGGTAA 60.419 50.000 0.00 0.00 0.00 2.85
1037 1072 1.136891 CCATGTCGATCTGCACTGGTA 59.863 52.381 0.00 0.00 0.00 3.25
1038 1073 0.107993 CCATGTCGATCTGCACTGGT 60.108 55.000 0.00 0.00 0.00 4.00
1039 1074 0.176449 TCCATGTCGATCTGCACTGG 59.824 55.000 0.00 1.03 0.00 4.00
1040 1075 2.235845 ATCCATGTCGATCTGCACTG 57.764 50.000 0.00 0.00 0.00 3.66
1041 1076 2.433604 AGAATCCATGTCGATCTGCACT 59.566 45.455 0.00 0.00 0.00 4.40
1042 1077 2.831333 AGAATCCATGTCGATCTGCAC 58.169 47.619 0.00 0.00 0.00 4.57
1043 1078 4.879197 ATAGAATCCATGTCGATCTGCA 57.121 40.909 0.00 0.00 0.00 4.41
1044 1079 7.675870 GCAATTATAGAATCCATGTCGATCTGC 60.676 40.741 0.00 0.00 0.00 4.26
1045 1080 7.332678 TGCAATTATAGAATCCATGTCGATCTG 59.667 37.037 0.00 0.00 0.00 2.90
1046 1081 7.389232 TGCAATTATAGAATCCATGTCGATCT 58.611 34.615 0.00 0.00 0.00 2.75
1047 1082 7.332926 ACTGCAATTATAGAATCCATGTCGATC 59.667 37.037 0.00 0.00 0.00 3.69
1048 1083 7.118825 CACTGCAATTATAGAATCCATGTCGAT 59.881 37.037 0.00 0.00 0.00 3.59
1049 1084 6.424812 CACTGCAATTATAGAATCCATGTCGA 59.575 38.462 0.00 0.00 0.00 4.20
1050 1085 6.424812 TCACTGCAATTATAGAATCCATGTCG 59.575 38.462 0.00 0.00 0.00 4.35
1051 1086 7.734924 TCACTGCAATTATAGAATCCATGTC 57.265 36.000 0.00 0.00 0.00 3.06
1052 1087 8.523915 TTTCACTGCAATTATAGAATCCATGT 57.476 30.769 0.00 0.00 0.00 3.21
1053 1088 9.976511 AATTTCACTGCAATTATAGAATCCATG 57.023 29.630 0.00 0.00 0.00 3.66
1054 1089 9.976511 CAATTTCACTGCAATTATAGAATCCAT 57.023 29.630 0.00 0.00 0.00 3.41
1055 1090 9.187996 TCAATTTCACTGCAATTATAGAATCCA 57.812 29.630 0.00 0.00 0.00 3.41
1059 1094 9.187996 TGGATCAATTTCACTGCAATTATAGAA 57.812 29.630 0.00 0.00 0.00 2.10
1060 1095 8.750515 TGGATCAATTTCACTGCAATTATAGA 57.249 30.769 0.00 0.00 0.00 1.98
1061 1096 8.080417 CCTGGATCAATTTCACTGCAATTATAG 58.920 37.037 0.00 0.00 0.00 1.31
1062 1097 7.470424 GCCTGGATCAATTTCACTGCAATTATA 60.470 37.037 0.00 0.00 0.00 0.98
1063 1098 6.684613 GCCTGGATCAATTTCACTGCAATTAT 60.685 38.462 0.00 0.00 0.00 1.28
1064 1099 5.394443 GCCTGGATCAATTTCACTGCAATTA 60.394 40.000 0.00 0.00 0.00 1.40
1065 1100 4.622220 GCCTGGATCAATTTCACTGCAATT 60.622 41.667 0.00 0.00 0.00 2.32
1066 1101 3.118884 GCCTGGATCAATTTCACTGCAAT 60.119 43.478 0.00 0.00 0.00 3.56
1067 1102 2.231964 GCCTGGATCAATTTCACTGCAA 59.768 45.455 0.00 0.00 0.00 4.08
1068 1103 1.820519 GCCTGGATCAATTTCACTGCA 59.179 47.619 0.00 0.00 0.00 4.41
1069 1104 2.097825 AGCCTGGATCAATTTCACTGC 58.902 47.619 0.00 0.00 0.00 4.40
1070 1105 3.760151 TGAAGCCTGGATCAATTTCACTG 59.240 43.478 0.00 0.00 0.00 3.66
1071 1106 4.015084 CTGAAGCCTGGATCAATTTCACT 58.985 43.478 0.00 0.00 0.00 3.41
1072 1107 4.012374 TCTGAAGCCTGGATCAATTTCAC 58.988 43.478 0.00 0.00 0.00 3.18
1073 1108 4.267536 CTCTGAAGCCTGGATCAATTTCA 58.732 43.478 0.00 0.00 0.00 2.69
1074 1109 3.631227 CCTCTGAAGCCTGGATCAATTTC 59.369 47.826 0.00 0.00 0.00 2.17
1075 1110 3.011032 ACCTCTGAAGCCTGGATCAATTT 59.989 43.478 0.00 0.00 0.00 1.82
1076 1111 2.579860 ACCTCTGAAGCCTGGATCAATT 59.420 45.455 0.00 0.00 0.00 2.32
1077 1112 2.203584 ACCTCTGAAGCCTGGATCAAT 58.796 47.619 0.00 0.00 0.00 2.57
1078 1113 1.661463 ACCTCTGAAGCCTGGATCAA 58.339 50.000 0.00 0.00 0.00 2.57
1079 1114 1.280133 CAACCTCTGAAGCCTGGATCA 59.720 52.381 0.00 0.00 0.00 2.92
1080 1115 1.556911 TCAACCTCTGAAGCCTGGATC 59.443 52.381 0.00 0.00 0.00 3.36
1081 1116 1.280421 GTCAACCTCTGAAGCCTGGAT 59.720 52.381 0.00 0.00 35.22 3.41
1082 1117 0.687354 GTCAACCTCTGAAGCCTGGA 59.313 55.000 0.00 0.00 35.22 3.86
1083 1118 0.397941 TGTCAACCTCTGAAGCCTGG 59.602 55.000 0.00 0.00 35.22 4.45
1084 1119 1.345741 TCTGTCAACCTCTGAAGCCTG 59.654 52.381 0.00 0.00 35.22 4.85
1085 1120 1.722034 TCTGTCAACCTCTGAAGCCT 58.278 50.000 0.00 0.00 35.22 4.58
1086 1121 2.626840 GATCTGTCAACCTCTGAAGCC 58.373 52.381 0.00 0.00 35.22 4.35
1087 1122 2.266554 CGATCTGTCAACCTCTGAAGC 58.733 52.381 0.00 0.00 35.22 3.86
1088 1123 2.232452 ACCGATCTGTCAACCTCTGAAG 59.768 50.000 0.00 0.00 35.22 3.02
1089 1124 2.248248 ACCGATCTGTCAACCTCTGAA 58.752 47.619 0.00 0.00 35.22 3.02
1090 1125 1.924731 ACCGATCTGTCAACCTCTGA 58.075 50.000 0.00 0.00 0.00 3.27
1091 1126 5.713792 ATATACCGATCTGTCAACCTCTG 57.286 43.478 0.00 0.00 0.00 3.35
1092 1127 5.048643 CGAATATACCGATCTGTCAACCTCT 60.049 44.000 0.00 0.00 0.00 3.69
1093 1128 5.154932 CGAATATACCGATCTGTCAACCTC 58.845 45.833 0.00 0.00 0.00 3.85
1094 1129 4.583489 ACGAATATACCGATCTGTCAACCT 59.417 41.667 0.00 0.00 0.00 3.50
1095 1130 4.868067 ACGAATATACCGATCTGTCAACC 58.132 43.478 0.00 0.00 0.00 3.77
1096 1131 5.759963 AGACGAATATACCGATCTGTCAAC 58.240 41.667 0.00 0.00 0.00 3.18
1097 1132 7.389607 TGATAGACGAATATACCGATCTGTCAA 59.610 37.037 16.45 0.00 35.22 3.18
1098 1133 6.877322 TGATAGACGAATATACCGATCTGTCA 59.123 38.462 15.71 15.71 35.46 3.58
1099 1134 7.304919 TGATAGACGAATATACCGATCTGTC 57.695 40.000 0.00 10.09 32.29 3.51
1100 1135 7.553044 TGATGATAGACGAATATACCGATCTGT 59.447 37.037 4.69 0.00 0.00 3.41
1101 1136 7.920738 TGATGATAGACGAATATACCGATCTG 58.079 38.462 4.69 0.00 0.00 2.90
1102 1137 8.507524 TTGATGATAGACGAATATACCGATCT 57.492 34.615 4.69 6.26 0.00 2.75
1103 1138 7.858382 CCTTGATGATAGACGAATATACCGATC 59.142 40.741 4.69 0.00 0.00 3.69
1104 1139 7.556635 TCCTTGATGATAGACGAATATACCGAT 59.443 37.037 4.69 0.00 0.00 4.18
1105 1140 6.882678 TCCTTGATGATAGACGAATATACCGA 59.117 38.462 4.69 0.00 0.00 4.69
1106 1141 7.065923 TCTCCTTGATGATAGACGAATATACCG 59.934 40.741 0.00 0.00 0.00 4.02
1107 1142 8.282455 TCTCCTTGATGATAGACGAATATACC 57.718 38.462 0.00 0.00 0.00 2.73
1111 1146 9.740710 TCTAATCTCCTTGATGATAGACGAATA 57.259 33.333 0.00 0.00 35.21 1.75
1112 1147 8.642935 TCTAATCTCCTTGATGATAGACGAAT 57.357 34.615 0.00 0.00 35.21 3.34
1113 1148 8.642935 ATCTAATCTCCTTGATGATAGACGAA 57.357 34.615 0.00 0.00 35.21 3.85
1114 1149 9.913310 ATATCTAATCTCCTTGATGATAGACGA 57.087 33.333 0.00 0.00 35.21 4.20
1144 1179 9.871238 AGTAATACAATTTTCACGTAGAGACAT 57.129 29.630 0.00 0.00 0.00 3.06
1145 1180 9.350357 GAGTAATACAATTTTCACGTAGAGACA 57.650 33.333 0.00 0.00 0.00 3.41
1146 1181 9.350357 TGAGTAATACAATTTTCACGTAGAGAC 57.650 33.333 0.00 0.00 0.00 3.36
1149 1184 9.647797 ACATGAGTAATACAATTTTCACGTAGA 57.352 29.630 0.00 0.00 0.00 2.59
1159 1194 9.245962 GCTACGACTTACATGAGTAATACAATT 57.754 33.333 0.00 0.00 39.36 2.32
1160 1195 7.866393 GGCTACGACTTACATGAGTAATACAAT 59.134 37.037 0.00 0.00 39.36 2.71
1161 1196 7.148035 TGGCTACGACTTACATGAGTAATACAA 60.148 37.037 0.00 0.00 39.36 2.41
1162 1197 6.319405 TGGCTACGACTTACATGAGTAATACA 59.681 38.462 0.00 0.00 39.36 2.29
1163 1198 6.732154 TGGCTACGACTTACATGAGTAATAC 58.268 40.000 0.00 0.00 39.36 1.89
1164 1199 6.947644 TGGCTACGACTTACATGAGTAATA 57.052 37.500 0.00 0.00 39.36 0.98
1165 1200 5.847111 TGGCTACGACTTACATGAGTAAT 57.153 39.130 0.00 0.00 39.36 1.89
1166 1201 5.648178 TTGGCTACGACTTACATGAGTAA 57.352 39.130 0.00 0.00 37.86 2.24
1167 1202 5.648178 TTTGGCTACGACTTACATGAGTA 57.352 39.130 0.00 0.00 0.00 2.59
1168 1203 4.530710 TTTGGCTACGACTTACATGAGT 57.469 40.909 0.00 0.00 0.00 3.41
1169 1204 7.534085 TTATTTTGGCTACGACTTACATGAG 57.466 36.000 0.00 0.00 0.00 2.90
1170 1205 7.604927 ACTTTATTTTGGCTACGACTTACATGA 59.395 33.333 0.00 0.00 0.00 3.07
1171 1206 7.748847 ACTTTATTTTGGCTACGACTTACATG 58.251 34.615 0.00 0.00 0.00 3.21
1172 1207 7.916914 ACTTTATTTTGGCTACGACTTACAT 57.083 32.000 0.00 0.00 0.00 2.29
1173 1208 7.733402 AACTTTATTTTGGCTACGACTTACA 57.267 32.000 0.00 0.00 0.00 2.41
1174 1209 8.929746 ACTAACTTTATTTTGGCTACGACTTAC 58.070 33.333 0.00 0.00 0.00 2.34
1175 1210 8.928733 CACTAACTTTATTTTGGCTACGACTTA 58.071 33.333 0.00 0.00 0.00 2.24
1176 1211 7.658575 TCACTAACTTTATTTTGGCTACGACTT 59.341 33.333 0.00 0.00 0.00 3.01
1177 1212 7.156673 TCACTAACTTTATTTTGGCTACGACT 58.843 34.615 0.00 0.00 0.00 4.18
1178 1213 7.355332 TCACTAACTTTATTTTGGCTACGAC 57.645 36.000 0.00 0.00 0.00 4.34
1179 1214 9.309516 CTATCACTAACTTTATTTTGGCTACGA 57.690 33.333 0.00 0.00 0.00 3.43
1180 1215 8.062448 GCTATCACTAACTTTATTTTGGCTACG 58.938 37.037 0.00 0.00 0.00 3.51
1181 1216 9.110502 AGCTATCACTAACTTTATTTTGGCTAC 57.889 33.333 0.00 0.00 0.00 3.58
1182 1217 9.681062 AAGCTATCACTAACTTTATTTTGGCTA 57.319 29.630 0.00 0.00 0.00 3.93
1183 1218 8.581253 AAGCTATCACTAACTTTATTTTGGCT 57.419 30.769 0.00 0.00 0.00 4.75
1184 1219 9.937175 CTAAGCTATCACTAACTTTATTTTGGC 57.063 33.333 0.00 0.00 0.00 4.52
1185 1220 9.937175 GCTAAGCTATCACTAACTTTATTTTGG 57.063 33.333 0.00 0.00 0.00 3.28
1194 1229 8.831550 GCAAATTTAGCTAAGCTATCACTAACT 58.168 33.333 6.24 0.00 41.01 2.24
1195 1230 8.831550 AGCAAATTTAGCTAAGCTATCACTAAC 58.168 33.333 14.41 0.00 41.01 2.34
1196 1231 8.964476 AGCAAATTTAGCTAAGCTATCACTAA 57.036 30.769 14.41 0.00 41.01 2.24
1197 1232 7.382488 CGAGCAAATTTAGCTAAGCTATCACTA 59.618 37.037 15.61 0.00 43.58 2.74
1198 1233 6.201806 CGAGCAAATTTAGCTAAGCTATCACT 59.798 38.462 15.61 5.80 43.58 3.41
1199 1234 6.018669 ACGAGCAAATTTAGCTAAGCTATCAC 60.019 38.462 15.61 5.30 43.58 3.06
1200 1235 6.049149 ACGAGCAAATTTAGCTAAGCTATCA 58.951 36.000 15.61 0.00 43.58 2.15
1201 1236 6.532365 ACGAGCAAATTTAGCTAAGCTATC 57.468 37.500 15.61 6.36 43.58 2.08
1202 1237 7.169982 CACTACGAGCAAATTTAGCTAAGCTAT 59.830 37.037 15.61 10.74 43.58 2.97
1203 1238 6.475727 CACTACGAGCAAATTTAGCTAAGCTA 59.524 38.462 15.61 0.00 43.58 3.32
1204 1239 5.292101 CACTACGAGCAAATTTAGCTAAGCT 59.708 40.000 15.57 15.57 43.58 3.74
1205 1240 5.291128 TCACTACGAGCAAATTTAGCTAAGC 59.709 40.000 6.24 6.79 43.58 3.09
1206 1241 6.019479 CCTCACTACGAGCAAATTTAGCTAAG 60.019 42.308 6.24 12.36 43.58 2.18
1207 1242 5.810587 CCTCACTACGAGCAAATTTAGCTAA 59.189 40.000 0.86 0.86 43.58 3.09
1208 1243 5.348986 CCTCACTACGAGCAAATTTAGCTA 58.651 41.667 12.96 0.00 43.58 3.32
1209 1244 4.184629 CCTCACTACGAGCAAATTTAGCT 58.815 43.478 12.87 12.87 46.82 3.32
1210 1245 3.309954 CCCTCACTACGAGCAAATTTAGC 59.690 47.826 0.00 0.00 40.78 3.09
1211 1246 4.504858 ACCCTCACTACGAGCAAATTTAG 58.495 43.478 0.00 0.00 40.78 1.85
1212 1247 4.546829 ACCCTCACTACGAGCAAATTTA 57.453 40.909 0.00 0.00 40.78 1.40
1213 1248 3.418684 ACCCTCACTACGAGCAAATTT 57.581 42.857 0.00 0.00 40.78 1.82
1214 1249 3.767673 TCTACCCTCACTACGAGCAAATT 59.232 43.478 0.00 0.00 40.78 1.82
1215 1250 3.362706 TCTACCCTCACTACGAGCAAAT 58.637 45.455 0.00 0.00 40.78 2.32
1216 1251 2.799017 TCTACCCTCACTACGAGCAAA 58.201 47.619 0.00 0.00 40.78 3.68
1217 1252 2.490903 GTTCTACCCTCACTACGAGCAA 59.509 50.000 0.00 0.00 40.78 3.91
1218 1253 2.089980 GTTCTACCCTCACTACGAGCA 58.910 52.381 0.00 0.00 40.78 4.26
1219 1254 1.404748 GGTTCTACCCTCACTACGAGC 59.595 57.143 0.00 0.00 40.78 5.03
1220 1255 2.719739 TGGTTCTACCCTCACTACGAG 58.280 52.381 0.00 0.00 37.50 4.18
1221 1256 2.885135 TGGTTCTACCCTCACTACGA 57.115 50.000 0.00 0.00 37.50 3.43
1222 1257 3.021695 TCATGGTTCTACCCTCACTACG 58.978 50.000 0.00 0.00 37.50 3.51
1223 1258 4.024670 AGTCATGGTTCTACCCTCACTAC 58.975 47.826 0.00 0.00 37.50 2.73
1224 1259 4.332683 AGTCATGGTTCTACCCTCACTA 57.667 45.455 0.00 0.00 37.50 2.74
1225 1260 3.191888 AGTCATGGTTCTACCCTCACT 57.808 47.619 0.00 0.00 37.50 3.41
1226 1261 3.600388 CAAGTCATGGTTCTACCCTCAC 58.400 50.000 0.00 0.00 37.50 3.51
1227 1262 2.571653 CCAAGTCATGGTTCTACCCTCA 59.428 50.000 0.00 0.00 44.85 3.86
1228 1263 3.268023 CCAAGTCATGGTTCTACCCTC 57.732 52.381 0.00 0.00 44.85 4.30
1239 1274 2.026822 ACCAGAACCTAGCCAAGTCATG 60.027 50.000 0.00 0.00 0.00 3.07
1240 1275 2.237392 GACCAGAACCTAGCCAAGTCAT 59.763 50.000 0.00 0.00 0.00 3.06
1241 1276 1.623811 GACCAGAACCTAGCCAAGTCA 59.376 52.381 0.00 0.00 0.00 3.41
1242 1277 1.066071 GGACCAGAACCTAGCCAAGTC 60.066 57.143 0.00 0.00 0.00 3.01
1243 1278 0.984995 GGACCAGAACCTAGCCAAGT 59.015 55.000 0.00 0.00 0.00 3.16
1244 1279 1.208293 GAGGACCAGAACCTAGCCAAG 59.792 57.143 0.00 0.00 37.93 3.61
1245 1280 1.276622 GAGGACCAGAACCTAGCCAA 58.723 55.000 0.00 0.00 37.93 4.52
1246 1281 0.617820 GGAGGACCAGAACCTAGCCA 60.618 60.000 0.00 0.00 37.93 4.75
1247 1282 0.325765 AGGAGGACCAGAACCTAGCC 60.326 60.000 0.00 0.00 37.93 3.93
1248 1283 0.827368 CAGGAGGACCAGAACCTAGC 59.173 60.000 0.00 0.00 37.93 3.42
1249 1284 2.383855 CTCAGGAGGACCAGAACCTAG 58.616 57.143 0.00 0.00 37.93 3.02
1250 1285 2.534042 CTCAGGAGGACCAGAACCTA 57.466 55.000 0.00 0.00 37.93 3.08
1251 1286 3.390280 CTCAGGAGGACCAGAACCT 57.610 57.895 0.00 0.00 40.80 3.50
1262 1297 2.679349 GCTAGTTCCAAAGCCTCAGGAG 60.679 54.545 0.00 0.00 32.11 3.69
1263 1298 1.279271 GCTAGTTCCAAAGCCTCAGGA 59.721 52.381 0.00 0.00 32.40 3.86
1264 1299 1.280421 AGCTAGTTCCAAAGCCTCAGG 59.720 52.381 0.00 0.00 39.64 3.86
1265 1300 2.354259 CAGCTAGTTCCAAAGCCTCAG 58.646 52.381 0.00 0.00 39.64 3.35
1266 1301 1.611673 GCAGCTAGTTCCAAAGCCTCA 60.612 52.381 0.00 0.00 39.64 3.86
1267 1302 1.090728 GCAGCTAGTTCCAAAGCCTC 58.909 55.000 0.00 0.00 39.64 4.70
1268 1303 0.674895 CGCAGCTAGTTCCAAAGCCT 60.675 55.000 0.00 0.00 39.64 4.58
1269 1304 0.673644 TCGCAGCTAGTTCCAAAGCC 60.674 55.000 0.00 0.00 39.64 4.35
1270 1305 1.373570 ATCGCAGCTAGTTCCAAAGC 58.626 50.000 0.00 0.00 39.08 3.51
1271 1306 3.002791 TCAATCGCAGCTAGTTCCAAAG 58.997 45.455 0.00 0.00 0.00 2.77
1272 1307 3.052455 TCAATCGCAGCTAGTTCCAAA 57.948 42.857 0.00 0.00 0.00 3.28
1273 1308 2.760634 TCAATCGCAGCTAGTTCCAA 57.239 45.000 0.00 0.00 0.00 3.53
1274 1309 2.938451 CAATCAATCGCAGCTAGTTCCA 59.062 45.455 0.00 0.00 0.00 3.53
1275 1310 2.939103 ACAATCAATCGCAGCTAGTTCC 59.061 45.455 0.00 0.00 0.00 3.62
1276 1311 5.277058 CCTTACAATCAATCGCAGCTAGTTC 60.277 44.000 0.00 0.00 0.00 3.01
1277 1312 4.572389 CCTTACAATCAATCGCAGCTAGTT 59.428 41.667 0.00 0.00 0.00 2.24
1278 1313 4.122776 CCTTACAATCAATCGCAGCTAGT 58.877 43.478 0.00 0.00 0.00 2.57
1279 1314 4.210120 GTCCTTACAATCAATCGCAGCTAG 59.790 45.833 0.00 0.00 0.00 3.42
1280 1315 4.119862 GTCCTTACAATCAATCGCAGCTA 58.880 43.478 0.00 0.00 0.00 3.32
1281 1316 2.939103 GTCCTTACAATCAATCGCAGCT 59.061 45.455 0.00 0.00 0.00 4.24
1282 1317 2.939103 AGTCCTTACAATCAATCGCAGC 59.061 45.455 0.00 0.00 0.00 5.25
1283 1318 5.327091 CAAAGTCCTTACAATCAATCGCAG 58.673 41.667 0.00 0.00 0.00 5.18
1284 1319 4.155826 CCAAAGTCCTTACAATCAATCGCA 59.844 41.667 0.00 0.00 0.00 5.10
1285 1320 4.156008 ACCAAAGTCCTTACAATCAATCGC 59.844 41.667 0.00 0.00 0.00 4.58
1286 1321 5.391950 CCACCAAAGTCCTTACAATCAATCG 60.392 44.000 0.00 0.00 0.00 3.34
1287 1322 5.710099 TCCACCAAAGTCCTTACAATCAATC 59.290 40.000 0.00 0.00 0.00 2.67
1288 1323 5.640147 TCCACCAAAGTCCTTACAATCAAT 58.360 37.500 0.00 0.00 0.00 2.57
1289 1324 5.055265 TCCACCAAAGTCCTTACAATCAA 57.945 39.130 0.00 0.00 0.00 2.57
1290 1325 4.715534 TCCACCAAAGTCCTTACAATCA 57.284 40.909 0.00 0.00 0.00 2.57
1291 1326 5.253330 TCATCCACCAAAGTCCTTACAATC 58.747 41.667 0.00 0.00 0.00 2.67
1292 1327 5.222130 ACTCATCCACCAAAGTCCTTACAAT 60.222 40.000 0.00 0.00 0.00 2.71
1293 1328 4.104102 ACTCATCCACCAAAGTCCTTACAA 59.896 41.667 0.00 0.00 0.00 2.41
1294 1329 3.650942 ACTCATCCACCAAAGTCCTTACA 59.349 43.478 0.00 0.00 0.00 2.41
1295 1330 4.287766 ACTCATCCACCAAAGTCCTTAC 57.712 45.455 0.00 0.00 0.00 2.34
1296 1331 6.636454 ATTACTCATCCACCAAAGTCCTTA 57.364 37.500 0.00 0.00 0.00 2.69
1297 1332 4.993705 TTACTCATCCACCAAAGTCCTT 57.006 40.909 0.00 0.00 0.00 3.36
1298 1333 5.487488 TGTATTACTCATCCACCAAAGTCCT 59.513 40.000 0.00 0.00 0.00 3.85
1299 1334 5.741011 TGTATTACTCATCCACCAAAGTCC 58.259 41.667 0.00 0.00 0.00 3.85
1300 1335 7.681939 TTTGTATTACTCATCCACCAAAGTC 57.318 36.000 0.00 0.00 0.00 3.01
1301 1336 8.650143 AATTTGTATTACTCATCCACCAAAGT 57.350 30.769 0.00 0.00 0.00 2.66
1302 1337 9.573133 GAAATTTGTATTACTCATCCACCAAAG 57.427 33.333 0.00 0.00 0.00 2.77
1303 1338 9.308000 AGAAATTTGTATTACTCATCCACCAAA 57.692 29.630 0.00 0.00 0.00 3.28
1304 1339 8.877864 AGAAATTTGTATTACTCATCCACCAA 57.122 30.769 0.00 0.00 0.00 3.67
1305 1340 9.391006 GTAGAAATTTGTATTACTCATCCACCA 57.609 33.333 0.00 0.00 0.00 4.17
1306 1341 8.837389 GGTAGAAATTTGTATTACTCATCCACC 58.163 37.037 0.00 0.00 0.00 4.61
1307 1342 8.837389 GGGTAGAAATTTGTATTACTCATCCAC 58.163 37.037 0.00 0.00 0.00 4.02
1308 1343 7.713507 CGGGTAGAAATTTGTATTACTCATCCA 59.286 37.037 0.00 0.00 0.00 3.41
1309 1344 7.307811 GCGGGTAGAAATTTGTATTACTCATCC 60.308 40.741 0.00 0.00 0.00 3.51
1310 1345 7.225931 TGCGGGTAGAAATTTGTATTACTCATC 59.774 37.037 0.00 0.00 0.00 2.92
1311 1346 7.051623 TGCGGGTAGAAATTTGTATTACTCAT 58.948 34.615 0.00 0.00 0.00 2.90
1312 1347 6.408035 TGCGGGTAGAAATTTGTATTACTCA 58.592 36.000 0.00 0.00 0.00 3.41
1313 1348 6.913873 TGCGGGTAGAAATTTGTATTACTC 57.086 37.500 0.00 0.00 0.00 2.59
1314 1349 7.690952 TTTGCGGGTAGAAATTTGTATTACT 57.309 32.000 0.00 0.00 0.00 2.24
1315 1350 8.745464 TTTTTGCGGGTAGAAATTTGTATTAC 57.255 30.769 0.00 0.00 0.00 1.89
1350 1385 7.917505 GCAATATACCTGAAAATGACCAAAGAG 59.082 37.037 0.00 0.00 0.00 2.85
1412 1447 2.666317 GTGCAATAGTATTGCCCCCTT 58.334 47.619 34.14 0.00 44.32 3.95
1415 1450 1.961793 TCGTGCAATAGTATTGCCCC 58.038 50.000 34.14 25.69 44.32 5.80
1418 2665 5.751680 ACATTCATCGTGCAATAGTATTGC 58.248 37.500 32.09 32.09 45.11 3.56
1421 2668 7.356641 GATGACATTCATCGTGCAATAGTAT 57.643 36.000 0.52 0.00 43.11 2.12
1455 2702 4.534500 ACATGCCCATCTATTCGGGTATTA 59.466 41.667 0.00 0.00 44.54 0.98
1493 2740 6.283694 TGATGTTCAGATTGGATAGTACTGC 58.716 40.000 5.39 0.00 0.00 4.40
1494 2741 8.366401 AGATGATGTTCAGATTGGATAGTACTG 58.634 37.037 5.39 0.00 0.00 2.74
1495 2742 8.489676 AGATGATGTTCAGATTGGATAGTACT 57.510 34.615 0.00 0.00 0.00 2.73
1496 2743 9.853555 CTAGATGATGTTCAGATTGGATAGTAC 57.146 37.037 0.00 0.00 0.00 2.73
1497 2744 8.526978 GCTAGATGATGTTCAGATTGGATAGTA 58.473 37.037 0.00 0.00 0.00 1.82
1498 2745 7.385267 GCTAGATGATGTTCAGATTGGATAGT 58.615 38.462 0.00 0.00 0.00 2.12
1542 2789 1.135402 CCAAAACACGCCTAATCCAGC 60.135 52.381 0.00 0.00 0.00 4.85
1543 2790 2.432444 TCCAAAACACGCCTAATCCAG 58.568 47.619 0.00 0.00 0.00 3.86
1596 2843 3.376234 CCTGCAACTCATATCCACAACAG 59.624 47.826 0.00 0.00 0.00 3.16
1606 2853 5.109210 CAGTCGATTAACCTGCAACTCATA 58.891 41.667 0.00 0.00 0.00 2.15
1616 2863 1.153429 GCCGCCAGTCGATTAACCT 60.153 57.895 0.00 0.00 41.67 3.50
1771 3018 2.121786 CCGTCACCGTAATATGGTTCG 58.878 52.381 14.72 14.72 34.66 3.95
1777 3024 2.492881 TGTGTCACCGTCACCGTAATAT 59.507 45.455 0.00 0.00 35.25 1.28
1785 3032 0.878961 GGAGGTTGTGTCACCGTCAC 60.879 60.000 0.00 0.00 42.33 3.67
1793 3040 4.759693 TGTGAACATATTGGAGGTTGTGTC 59.240 41.667 0.00 0.00 30.59 3.67
1794 3041 4.518970 GTGTGAACATATTGGAGGTTGTGT 59.481 41.667 0.00 0.00 30.59 3.72
1795 3042 4.518590 TGTGTGAACATATTGGAGGTTGTG 59.481 41.667 0.00 0.00 30.59 3.33
1796 3043 4.724399 TGTGTGAACATATTGGAGGTTGT 58.276 39.130 0.00 0.00 30.59 3.32
1797 3044 4.761739 ACTGTGTGAACATATTGGAGGTTG 59.238 41.667 0.00 0.00 30.59 3.77
1798 3045 4.761739 CACTGTGTGAACATATTGGAGGTT 59.238 41.667 0.00 0.00 35.23 3.50
1800 3047 3.691118 CCACTGTGTGAACATATTGGAGG 59.309 47.826 9.98 0.00 39.17 4.30
1801 3048 3.127548 GCCACTGTGTGAACATATTGGAG 59.872 47.826 17.15 0.00 39.17 3.86
1802 3049 3.081061 GCCACTGTGTGAACATATTGGA 58.919 45.455 17.15 0.00 39.17 3.53
1803 3050 2.164219 GGCCACTGTGTGAACATATTGG 59.836 50.000 10.89 10.89 39.59 3.16
1814 3062 3.719268 TGAATGATAAGGCCACTGTGT 57.281 42.857 5.01 0.00 0.00 3.72
1819 3067 4.660789 AAAGCATGAATGATAAGGCCAC 57.339 40.909 5.01 0.00 0.00 5.01
1840 3088 7.921786 AAGAAGTATAGCAGTTGTTATGCAA 57.078 32.000 0.00 0.00 46.31 4.08
1841 3089 7.921786 AAAGAAGTATAGCAGTTGTTATGCA 57.078 32.000 0.00 0.00 46.31 3.96
1930 3178 2.486203 AGCACGGACGAATTGCATAAAA 59.514 40.909 8.20 0.00 38.81 1.52
1937 3185 1.016130 AGCTCAGCACGGACGAATTG 61.016 55.000 0.00 0.00 0.00 2.32
1946 3194 8.667987 TTGTAAATTTTTATTAGCTCAGCACG 57.332 30.769 0.00 0.00 0.00 5.34
2005 3253 8.965819 TGCAGGCATAGAAAAGAAATATGTTAA 58.034 29.630 0.00 0.00 31.04 2.01
2162 3410 5.475909 CCACTGCAATTGGATATGAAGCTAT 59.524 40.000 7.72 0.00 36.02 2.97
2211 3459 7.937394 AGATTGTTAAGTATAATTTCCGGGGAG 59.063 37.037 0.00 0.00 0.00 4.30
2212 3460 7.808218 AGATTGTTAAGTATAATTTCCGGGGA 58.192 34.615 0.00 0.00 0.00 4.81
2213 3461 8.459911 AAGATTGTTAAGTATAATTTCCGGGG 57.540 34.615 0.00 0.00 0.00 5.73
2214 3462 9.338622 AGAAGATTGTTAAGTATAATTTCCGGG 57.661 33.333 0.00 0.00 0.00 5.73
2238 3486 6.859112 AAAGTGAAGCTATAACCTGAGAGA 57.141 37.500 0.00 0.00 0.00 3.10
2281 3530 7.888021 ACCAGAACAATCAAATAGTGGTATTCA 59.112 33.333 0.00 0.00 35.27 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.