Multiple sequence alignment - TraesCS1B01G339300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G339300 chr1B 100.000 4223 0 0 1 4223 566957576 566953354 0.000000e+00 7799.0
1 TraesCS1B01G339300 chr1B 100.000 541 0 0 2 542 566974611 566974071 0.000000e+00 1000.0
2 TraesCS1B01G339300 chr1B 99.815 541 1 0 2 542 123424097 123423557 0.000000e+00 994.0
3 TraesCS1B01G339300 chr1B 79.401 267 32 16 3976 4220 269554846 269555111 2.610000e-37 167.0
4 TraesCS1B01G339300 chr1D 93.832 3113 114 26 576 3670 419968502 419965450 0.000000e+00 4614.0
5 TraesCS1B01G339300 chr1A 92.757 2996 113 39 543 3486 516581333 516578390 0.000000e+00 4235.0
6 TraesCS1B01G339300 chr1A 99.815 541 1 0 2 542 15605479 15606019 0.000000e+00 994.0
7 TraesCS1B01G339300 chr1A 99.632 544 2 0 1 544 311815682 311815139 0.000000e+00 994.0
8 TraesCS1B01G339300 chr7B 100.000 542 0 0 1 542 558308980 558309521 0.000000e+00 1002.0
9 TraesCS1B01G339300 chr7B 90.278 72 7 0 3976 4047 127770290 127770361 1.250000e-15 95.3
10 TraesCS1B01G339300 chr3B 99.816 543 1 0 2 544 781755800 781756342 0.000000e+00 998.0
11 TraesCS1B01G339300 chrUn 99.815 541 1 0 2 542 64721726 64721186 0.000000e+00 994.0
12 TraesCS1B01G339300 chrUn 99.815 541 1 0 2 542 356747648 356747108 0.000000e+00 994.0
13 TraesCS1B01G339300 chrUn 90.667 75 7 0 3904 3978 362713259 362713333 2.690000e-17 100.0
14 TraesCS1B01G339300 chrUn 95.238 63 3 0 3916 3978 473671214 473671152 2.690000e-17 100.0
15 TraesCS1B01G339300 chr4B 99.815 541 1 0 2 542 461649273 461649813 0.000000e+00 994.0
16 TraesCS1B01G339300 chr4B 83.516 182 24 3 4044 4220 328342097 328341917 9.390000e-37 165.0
17 TraesCS1B01G339300 chr4B 79.167 264 31 12 3979 4218 182802421 182802158 1.220000e-35 161.0
18 TraesCS1B01G339300 chr4A 79.781 1276 214 30 1927 3192 620390846 620389605 0.000000e+00 887.0
19 TraesCS1B01G339300 chr4A 87.769 605 63 6 1022 1623 620391788 620391192 0.000000e+00 697.0
20 TraesCS1B01G339300 chr4A 78.276 580 96 16 1047 1617 620430443 620431001 3.130000e-91 346.0
21 TraesCS1B01G339300 chr4A 80.916 393 56 12 2708 3098 620438187 620438562 4.130000e-75 292.0
22 TraesCS1B01G339300 chr4A 85.281 231 31 2 2959 3189 620423622 620423849 7.060000e-58 235.0
23 TraesCS1B01G339300 chr4A 84.530 181 26 2 1927 2106 620431344 620431523 1.210000e-40 178.0
24 TraesCS1B01G339300 chr5B 79.781 1276 205 33 1927 3192 700473517 700472285 0.000000e+00 878.0
25 TraesCS1B01G339300 chr5B 87.793 598 59 5 1022 1617 700564202 700564787 0.000000e+00 688.0
26 TraesCS1B01G339300 chr5B 89.600 500 47 5 1022 1518 700474426 700473929 7.710000e-177 630.0
27 TraesCS1B01G339300 chr5B 76.986 491 94 13 2701 3189 700555235 700555708 3.240000e-66 263.0
28 TraesCS1B01G339300 chr5B 78.450 413 63 17 2759 3168 700565194 700565583 3.260000e-61 246.0
29 TraesCS1B01G339300 chr5B 82.432 74 13 0 1550 1623 700473936 700473863 9.800000e-07 65.8
30 TraesCS1B01G339300 chr5D 79.386 1271 213 32 1927 3189 548990323 548991552 0.000000e+00 850.0
31 TraesCS1B01G339300 chr5D 88.926 605 56 6 1022 1623 548974348 548973752 0.000000e+00 736.0
32 TraesCS1B01G339300 chr5D 88.982 599 55 6 1022 1617 548989381 548989971 0.000000e+00 730.0
33 TraesCS1B01G339300 chr5D 78.763 485 78 18 2708 3187 548979826 548979362 6.860000e-78 302.0
34 TraesCS1B01G339300 chr5D 77.407 270 35 15 3976 4220 227003571 227003303 2.050000e-28 137.0
35 TraesCS1B01G339300 chr3A 81.343 268 27 10 3976 4220 333001703 333001436 3.330000e-46 196.0
36 TraesCS1B01G339300 chr3A 77.273 286 37 15 3960 4220 482904178 482904460 4.400000e-30 143.0
37 TraesCS1B01G339300 chr2D 84.324 185 20 7 4038 4220 648307524 648307701 5.610000e-39 172.0
38 TraesCS1B01G339300 chr2D 82.778 180 24 4 4050 4222 322848284 322848463 2.030000e-33 154.0
39 TraesCS1B01G339300 chr2A 79.705 271 27 15 3976 4220 377848219 377848487 2.020000e-38 171.0
40 TraesCS1B01G339300 chr2A 81.720 186 26 3 4044 4222 18590696 18590512 9.460000e-32 148.0
41 TraesCS1B01G339300 chr2A 77.737 274 37 10 3974 4223 471822667 471822394 3.400000e-31 147.0
42 TraesCS1B01G339300 chr2A 84.091 88 11 3 3960 4045 761224552 761224638 9.730000e-12 82.4
43 TraesCS1B01G339300 chr3D 78.853 279 33 15 3965 4220 40866793 40866518 9.390000e-37 165.0
44 TraesCS1B01G339300 chr3D 76.522 230 28 8 3961 4167 100405275 100405501 7.470000e-18 102.0
45 TraesCS1B01G339300 chr4D 79.104 268 31 13 3976 4220 275769037 275768772 1.220000e-35 161.0
46 TraesCS1B01G339300 chr7D 82.065 184 25 4 4044 4220 440987672 440987854 2.630000e-32 150.0
47 TraesCS1B01G339300 chr7D 76.562 256 47 13 3977 4220 19650642 19650896 1.230000e-25 128.0
48 TraesCS1B01G339300 chr7D 75.338 296 36 20 3960 4220 206419699 206419406 1.610000e-19 108.0
49 TraesCS1B01G339300 chr7D 100.000 31 0 0 3948 3978 484347067 484347097 1.640000e-04 58.4
50 TraesCS1B01G339300 chr6D 86.598 97 10 2 3882 3978 188316898 188316805 2.080000e-18 104.0
51 TraesCS1B01G339300 chr5A 74.483 290 43 19 3960 4220 19518520 19518233 3.480000e-16 97.1
52 TraesCS1B01G339300 chr2B 85.542 83 12 0 3586 3668 8134037 8133955 2.090000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G339300 chr1B 566953354 566957576 4222 True 7799.0 7799 100.000000 1 4223 1 chr1B.!!$R2 4222
1 TraesCS1B01G339300 chr1B 566974071 566974611 540 True 1000.0 1000 100.000000 2 542 1 chr1B.!!$R3 540
2 TraesCS1B01G339300 chr1B 123423557 123424097 540 True 994.0 994 99.815000 2 542 1 chr1B.!!$R1 540
3 TraesCS1B01G339300 chr1D 419965450 419968502 3052 True 4614.0 4614 93.832000 576 3670 1 chr1D.!!$R1 3094
4 TraesCS1B01G339300 chr1A 516578390 516581333 2943 True 4235.0 4235 92.757000 543 3486 1 chr1A.!!$R2 2943
5 TraesCS1B01G339300 chr1A 15605479 15606019 540 False 994.0 994 99.815000 2 542 1 chr1A.!!$F1 540
6 TraesCS1B01G339300 chr1A 311815139 311815682 543 True 994.0 994 99.632000 1 544 1 chr1A.!!$R1 543
7 TraesCS1B01G339300 chr7B 558308980 558309521 541 False 1002.0 1002 100.000000 1 542 1 chr7B.!!$F2 541
8 TraesCS1B01G339300 chr3B 781755800 781756342 542 False 998.0 998 99.816000 2 544 1 chr3B.!!$F1 542
9 TraesCS1B01G339300 chrUn 64721186 64721726 540 True 994.0 994 99.815000 2 542 1 chrUn.!!$R1 540
10 TraesCS1B01G339300 chrUn 356747108 356747648 540 True 994.0 994 99.815000 2 542 1 chrUn.!!$R2 540
11 TraesCS1B01G339300 chr4B 461649273 461649813 540 False 994.0 994 99.815000 2 542 1 chr4B.!!$F1 540
12 TraesCS1B01G339300 chr4A 620389605 620391788 2183 True 792.0 887 83.775000 1022 3192 2 chr4A.!!$R1 2170
13 TraesCS1B01G339300 chr4A 620430443 620431523 1080 False 262.0 346 81.403000 1047 2106 2 chr4A.!!$F3 1059
14 TraesCS1B01G339300 chr5B 700472285 700474426 2141 True 524.6 878 83.937667 1022 3192 3 chr5B.!!$R1 2170
15 TraesCS1B01G339300 chr5B 700564202 700565583 1381 False 467.0 688 83.121500 1022 3168 2 chr5B.!!$F2 2146
16 TraesCS1B01G339300 chr5D 548989381 548991552 2171 False 790.0 850 84.184000 1022 3189 2 chr5D.!!$F1 2167
17 TraesCS1B01G339300 chr5D 548973752 548974348 596 True 736.0 736 88.926000 1022 1623 1 chr5D.!!$R2 601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
572 573 0.036952 CTCTGTCACCTCCGTTGCAT 60.037 55.0 0.0 0.0 0.0 3.96 F
573 574 0.396435 TCTGTCACCTCCGTTGCATT 59.604 50.0 0.0 0.0 0.0 3.56 F
1797 1924 0.436531 CGTTCGCACTCTTCAAGCTC 59.563 55.0 0.0 0.0 0.0 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1575 1615 1.354101 TGTACCCGGTCATTGTCCTT 58.646 50.0 0.00 0.0 0.00 3.36 R
2523 2656 1.436195 GCAATGCCGAGACGCCATTA 61.436 55.0 0.00 0.0 0.00 1.90 R
3377 3521 0.172803 GTCCGCTGTACTCGTGGAAT 59.827 55.0 16.19 0.0 42.22 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
563 564 1.818642 GCATTTCTGCTCTGTCACCT 58.181 50.000 0.00 0.00 45.32 4.00
572 573 0.036952 CTCTGTCACCTCCGTTGCAT 60.037 55.000 0.00 0.00 0.00 3.96
573 574 0.396435 TCTGTCACCTCCGTTGCATT 59.604 50.000 0.00 0.00 0.00 3.56
574 575 1.621317 TCTGTCACCTCCGTTGCATTA 59.379 47.619 0.00 0.00 0.00 1.90
647 648 2.186384 CCAAGCGAGGCTCTGAGG 59.814 66.667 13.50 5.41 38.25 3.86
653 654 1.398958 GCGAGGCTCTGAGGGAGAAT 61.399 60.000 13.50 0.00 44.45 2.40
682 683 3.859443 TGATCAGAAGAAAGCTCTCTGC 58.141 45.455 0.00 0.00 43.29 4.26
688 689 3.263937 AGAAGAAAGCTCTCTGCCAAGAT 59.736 43.478 0.00 0.00 44.23 2.40
689 690 3.717452 AGAAAGCTCTCTGCCAAGATT 57.283 42.857 0.00 0.00 44.23 2.40
690 691 3.345414 AGAAAGCTCTCTGCCAAGATTG 58.655 45.455 0.00 0.00 44.23 2.67
708 709 7.043192 CCAAGATTGTTGTGTGAAATCTGAAAC 60.043 37.037 0.00 0.00 39.86 2.78
740 741 3.734902 GCAAATATTCTTGCCTTCCACCG 60.735 47.826 1.30 0.00 44.88 4.94
742 743 3.644966 ATATTCTTGCCTTCCACCGAA 57.355 42.857 0.00 0.00 0.00 4.30
775 776 0.897401 TGCATGCCCCAAAACGATGA 60.897 50.000 16.68 0.00 0.00 2.92
777 778 1.803625 GCATGCCCCAAAACGATGATG 60.804 52.381 6.36 0.00 0.00 3.07
779 780 0.611618 TGCCCCAAAACGATGATGCT 60.612 50.000 0.00 0.00 0.00 3.79
780 781 0.532115 GCCCCAAAACGATGATGCTT 59.468 50.000 0.00 0.00 0.00 3.91
820 824 4.384647 CGATCCCATTCCTTTCTCCTCTTT 60.385 45.833 0.00 0.00 0.00 2.52
826 830 5.359292 CCATTCCTTTCTCCTCTTTTCATCC 59.641 44.000 0.00 0.00 0.00 3.51
905 911 4.202326 CCGTAGGCATTACTGATTACCCTT 60.202 45.833 0.00 0.00 46.14 3.95
1763 1890 0.460987 GTCGAGAAGGACATGGCCAG 60.461 60.000 22.78 6.08 36.91 4.85
1785 1912 4.656117 TTCTGCCTCGCGTTCGCA 62.656 61.111 16.98 11.55 35.26 5.10
1797 1924 0.436531 CGTTCGCACTCTTCAAGCTC 59.563 55.000 0.00 0.00 0.00 4.09
1923 2056 2.434331 CACCACCACCGGGACATT 59.566 61.111 6.32 0.00 38.05 2.71
2127 2260 2.417516 CGGATCGGCGTCAAGGAT 59.582 61.111 6.85 0.00 0.00 3.24
2523 2656 4.640690 AGCCGGGGACACCTCACT 62.641 66.667 2.18 0.00 36.97 3.41
2757 2899 3.567478 CTGCGCGTACCTGGTGTCA 62.567 63.158 10.23 0.00 0.00 3.58
3278 3420 3.335534 GAGTGCGACGCCGTTGTT 61.336 61.111 18.69 0.00 38.24 2.83
3320 3462 4.634133 GTCACGTCGCGGTGGTCA 62.634 66.667 14.25 0.00 38.46 4.02
3370 3514 4.000331 AGGTTGTTGATGTGTCTCTCTG 58.000 45.455 0.00 0.00 0.00 3.35
3377 3521 3.695606 GTGTCTCTCTGGCCGCCA 61.696 66.667 12.67 12.67 0.00 5.69
3386 3530 4.776322 TGGCCGCCATTCCACGAG 62.776 66.667 8.43 0.00 0.00 4.18
3388 3532 2.185867 GCCGCCATTCCACGAGTA 59.814 61.111 0.00 0.00 0.00 2.59
3390 3534 1.216977 CCGCCATTCCACGAGTACA 59.783 57.895 0.00 0.00 0.00 2.90
3408 3552 4.451150 GCGGACGTGGGCATCTCA 62.451 66.667 0.00 0.00 0.00 3.27
3409 3553 2.509336 CGGACGTGGGCATCTCAC 60.509 66.667 0.00 0.00 0.00 3.51
3439 3583 1.689273 AGATGATAGTTGCCGAGGTCC 59.311 52.381 0.00 0.00 0.00 4.46
3458 3608 1.207791 CTGATCTAACCTGCCCCACT 58.792 55.000 0.00 0.00 0.00 4.00
3487 3639 9.466497 AAGTACCATGAACTCAATCATATTTGT 57.534 29.630 0.00 0.00 37.96 2.83
3488 3640 9.466497 AGTACCATGAACTCAATCATATTTGTT 57.534 29.630 0.00 0.00 37.96 2.83
3523 3675 6.348376 GGGTGCATATTTGGAATTTTTGTGTG 60.348 38.462 0.00 0.00 0.00 3.82
3531 3683 2.794350 GGAATTTTTGTGTGACAAGGCG 59.206 45.455 0.00 0.00 39.53 5.52
3564 3717 5.300034 TGTGTGGCAAGATGATCATAATTCC 59.700 40.000 8.54 8.64 0.00 3.01
3584 3737 5.745312 TCCATTGATATGCTACGAGGAAT 57.255 39.130 0.00 0.00 0.00 3.01
3585 3738 6.114187 TCCATTGATATGCTACGAGGAATT 57.886 37.500 0.00 0.00 0.00 2.17
3628 3781 3.639625 ATTTTGGGGGTTAGGGTTTCA 57.360 42.857 0.00 0.00 0.00 2.69
3670 3823 8.100508 TGTTTGTCGATGATACATACCAAAAA 57.899 30.769 0.00 0.00 30.56 1.94
3671 3824 8.735315 TGTTTGTCGATGATACATACCAAAAAT 58.265 29.630 0.00 0.00 30.56 1.82
3672 3825 9.221775 GTTTGTCGATGATACATACCAAAAATC 57.778 33.333 0.00 0.00 0.00 2.17
3673 3826 8.731275 TTGTCGATGATACATACCAAAAATCT 57.269 30.769 0.00 0.00 0.00 2.40
3674 3827 8.365399 TGTCGATGATACATACCAAAAATCTC 57.635 34.615 0.00 0.00 0.00 2.75
3675 3828 7.984617 TGTCGATGATACATACCAAAAATCTCA 59.015 33.333 0.00 0.00 0.00 3.27
3676 3829 8.826710 GTCGATGATACATACCAAAAATCTCAA 58.173 33.333 0.00 0.00 0.00 3.02
3677 3830 9.389755 TCGATGATACATACCAAAAATCTCAAA 57.610 29.630 0.00 0.00 0.00 2.69
3681 3834 9.585099 TGATACATACCAAAAATCTCAAAATGC 57.415 29.630 0.00 0.00 0.00 3.56
3682 3835 9.585099 GATACATACCAAAAATCTCAAAATGCA 57.415 29.630 0.00 0.00 0.00 3.96
3684 3837 8.483307 ACATACCAAAAATCTCAAAATGCATC 57.517 30.769 0.00 0.00 0.00 3.91
3685 3838 8.316214 ACATACCAAAAATCTCAAAATGCATCT 58.684 29.630 0.00 0.00 0.00 2.90
3686 3839 8.600625 CATACCAAAAATCTCAAAATGCATCTG 58.399 33.333 0.00 0.43 0.00 2.90
3687 3840 6.761312 ACCAAAAATCTCAAAATGCATCTGA 58.239 32.000 0.00 5.44 0.00 3.27
3688 3841 6.872020 ACCAAAAATCTCAAAATGCATCTGAG 59.128 34.615 23.56 23.56 38.34 3.35
3689 3842 6.183360 CCAAAAATCTCAAAATGCATCTGAGC 60.183 38.462 24.27 0.00 37.17 4.26
3698 3851 2.327200 TGCATCTGAGCATCCAGAAG 57.673 50.000 7.41 5.03 45.22 2.85
3699 3852 0.945813 GCATCTGAGCATCCAGAAGC 59.054 55.000 12.66 12.66 46.12 3.86
3700 3853 1.218763 CATCTGAGCATCCAGAAGCG 58.781 55.000 7.41 0.00 45.22 4.68
3701 3854 1.117994 ATCTGAGCATCCAGAAGCGA 58.882 50.000 7.41 0.00 45.22 4.93
3702 3855 0.174389 TCTGAGCATCCAGAAGCGAC 59.826 55.000 1.69 0.00 39.96 5.19
3703 3856 0.809241 CTGAGCATCCAGAAGCGACC 60.809 60.000 0.00 0.00 36.29 4.79
3704 3857 1.522580 GAGCATCCAGAAGCGACCC 60.523 63.158 0.00 0.00 35.48 4.46
3705 3858 2.892425 GCATCCAGAAGCGACCCG 60.892 66.667 0.00 0.00 0.00 5.28
3706 3859 2.202932 CATCCAGAAGCGACCCGG 60.203 66.667 0.00 0.00 0.00 5.73
3707 3860 2.363795 ATCCAGAAGCGACCCGGA 60.364 61.111 0.73 0.00 0.00 5.14
3708 3861 2.427245 ATCCAGAAGCGACCCGGAG 61.427 63.158 0.73 0.00 0.00 4.63
3709 3862 2.856039 ATCCAGAAGCGACCCGGAGA 62.856 60.000 0.73 0.00 0.00 3.71
3710 3863 2.182030 CAGAAGCGACCCGGAGAC 59.818 66.667 0.73 0.00 0.00 3.36
3722 3875 2.027751 GGAGACGCCGCCATAGTC 59.972 66.667 0.00 0.00 35.30 2.59
3723 3876 2.782222 GGAGACGCCGCCATAGTCA 61.782 63.158 0.00 0.00 37.36 3.41
3724 3877 1.299468 GAGACGCCGCCATAGTCAG 60.299 63.158 0.00 0.00 37.36 3.51
3725 3878 2.962253 GACGCCGCCATAGTCAGC 60.962 66.667 0.00 0.00 35.19 4.26
3726 3879 3.432051 GACGCCGCCATAGTCAGCT 62.432 63.158 0.00 0.00 35.19 4.24
3727 3880 2.202932 CGCCGCCATAGTCAGCTT 60.203 61.111 0.00 0.00 0.00 3.74
3728 3881 2.240500 CGCCGCCATAGTCAGCTTC 61.241 63.158 0.00 0.00 0.00 3.86
3729 3882 2.240500 GCCGCCATAGTCAGCTTCG 61.241 63.158 0.00 0.00 0.00 3.79
3730 3883 1.592669 CCGCCATAGTCAGCTTCGG 60.593 63.158 0.00 0.00 0.00 4.30
3731 3884 1.437573 CGCCATAGTCAGCTTCGGA 59.562 57.895 0.00 0.00 0.00 4.55
3732 3885 0.596083 CGCCATAGTCAGCTTCGGAG 60.596 60.000 0.00 0.00 0.00 4.63
3733 3886 0.249657 GCCATAGTCAGCTTCGGAGG 60.250 60.000 0.00 0.00 0.00 4.30
3734 3887 0.249657 CCATAGTCAGCTTCGGAGGC 60.250 60.000 3.59 3.59 0.00 4.70
3735 3888 0.249657 CATAGTCAGCTTCGGAGGCC 60.250 60.000 8.63 0.00 0.00 5.19
3736 3889 1.403687 ATAGTCAGCTTCGGAGGCCC 61.404 60.000 8.63 0.00 0.00 5.80
3737 3890 2.516048 TAGTCAGCTTCGGAGGCCCT 62.516 60.000 8.63 5.29 0.00 5.19
3738 3891 3.077556 TCAGCTTCGGAGGCCCTC 61.078 66.667 8.63 0.73 0.00 4.30
3739 3892 4.168291 CAGCTTCGGAGGCCCTCC 62.168 72.222 20.68 20.68 46.44 4.30
3753 3906 4.016706 CTCCCTCGCAACCCCGTT 62.017 66.667 0.00 0.00 0.00 4.44
3754 3907 3.952628 CTCCCTCGCAACCCCGTTC 62.953 68.421 0.00 0.00 0.00 3.95
3755 3908 4.323477 CCCTCGCAACCCCGTTCA 62.323 66.667 0.00 0.00 0.00 3.18
3756 3909 2.742372 CCTCGCAACCCCGTTCAG 60.742 66.667 0.00 0.00 0.00 3.02
3757 3910 3.423154 CTCGCAACCCCGTTCAGC 61.423 66.667 0.00 0.00 0.00 4.26
3758 3911 3.883744 CTCGCAACCCCGTTCAGCT 62.884 63.158 0.00 0.00 0.00 4.24
3759 3912 3.423154 CGCAACCCCGTTCAGCTC 61.423 66.667 0.00 0.00 0.00 4.09
3760 3913 3.423154 GCAACCCCGTTCAGCTCG 61.423 66.667 0.00 0.00 0.00 5.03
3761 3914 2.030562 CAACCCCGTTCAGCTCGT 59.969 61.111 0.00 0.00 0.00 4.18
3762 3915 2.027625 CAACCCCGTTCAGCTCGTC 61.028 63.158 0.00 0.00 0.00 4.20
3763 3916 3.569049 AACCCCGTTCAGCTCGTCG 62.569 63.158 0.00 0.00 0.00 5.12
3823 3976 3.443588 GCGTCTTTGGCCTGGTTT 58.556 55.556 3.32 0.00 0.00 3.27
3824 3977 1.739667 GCGTCTTTGGCCTGGTTTT 59.260 52.632 3.32 0.00 0.00 2.43
3825 3978 0.104120 GCGTCTTTGGCCTGGTTTTT 59.896 50.000 3.32 0.00 0.00 1.94
3848 4001 6.648879 TTTTTCTATTCTTCCCTGGTGTTG 57.351 37.500 0.00 0.00 0.00 3.33
3849 4002 4.301072 TTCTATTCTTCCCTGGTGTTGG 57.699 45.455 0.00 0.00 0.00 3.77
3850 4003 2.026262 TCTATTCTTCCCTGGTGTTGGC 60.026 50.000 0.00 0.00 0.00 4.52
3851 4004 0.251787 ATTCTTCCCTGGTGTTGGCC 60.252 55.000 0.00 0.00 0.00 5.36
3852 4005 1.360393 TTCTTCCCTGGTGTTGGCCT 61.360 55.000 3.32 0.00 0.00 5.19
3853 4006 1.153756 CTTCCCTGGTGTTGGCCTT 59.846 57.895 3.32 0.00 0.00 4.35
3854 4007 0.895559 CTTCCCTGGTGTTGGCCTTC 60.896 60.000 3.32 0.00 0.00 3.46
3855 4008 1.360393 TTCCCTGGTGTTGGCCTTCT 61.360 55.000 3.32 0.00 0.00 2.85
3856 4009 1.604593 CCCTGGTGTTGGCCTTCTG 60.605 63.158 3.32 0.00 0.00 3.02
3857 4010 1.455849 CCTGGTGTTGGCCTTCTGA 59.544 57.895 3.32 0.00 0.00 3.27
3858 4011 0.038744 CCTGGTGTTGGCCTTCTGAT 59.961 55.000 3.32 0.00 0.00 2.90
3859 4012 1.548582 CCTGGTGTTGGCCTTCTGATT 60.549 52.381 3.32 0.00 0.00 2.57
3860 4013 2.242043 CTGGTGTTGGCCTTCTGATTT 58.758 47.619 3.32 0.00 0.00 2.17
3861 4014 1.962807 TGGTGTTGGCCTTCTGATTTG 59.037 47.619 3.32 0.00 0.00 2.32
3862 4015 1.963515 GGTGTTGGCCTTCTGATTTGT 59.036 47.619 3.32 0.00 0.00 2.83
3863 4016 2.029918 GGTGTTGGCCTTCTGATTTGTC 60.030 50.000 3.32 0.00 0.00 3.18
3864 4017 2.029918 GTGTTGGCCTTCTGATTTGTCC 60.030 50.000 3.32 0.00 0.00 4.02
3865 4018 1.200020 GTTGGCCTTCTGATTTGTCCG 59.800 52.381 3.32 0.00 0.00 4.79
3866 4019 0.400213 TGGCCTTCTGATTTGTCCGT 59.600 50.000 3.32 0.00 0.00 4.69
3867 4020 1.087501 GGCCTTCTGATTTGTCCGTC 58.912 55.000 0.00 0.00 0.00 4.79
3868 4021 0.721718 GCCTTCTGATTTGTCCGTCG 59.278 55.000 0.00 0.00 0.00 5.12
3869 4022 1.939838 GCCTTCTGATTTGTCCGTCGT 60.940 52.381 0.00 0.00 0.00 4.34
3870 4023 1.993370 CCTTCTGATTTGTCCGTCGTC 59.007 52.381 0.00 0.00 0.00 4.20
3871 4024 1.649171 CTTCTGATTTGTCCGTCGTCG 59.351 52.381 0.00 0.00 0.00 5.12
3872 4025 0.594602 TCTGATTTGTCCGTCGTCGT 59.405 50.000 0.71 0.00 35.01 4.34
3873 4026 0.982673 CTGATTTGTCCGTCGTCGTC 59.017 55.000 0.71 0.00 35.01 4.20
3874 4027 0.726787 TGATTTGTCCGTCGTCGTCG 60.727 55.000 4.87 4.87 38.55 5.12
3875 4028 0.727122 GATTTGTCCGTCGTCGTCGT 60.727 55.000 10.76 0.00 38.33 4.34
3876 4029 0.727122 ATTTGTCCGTCGTCGTCGTC 60.727 55.000 10.76 4.66 38.33 4.20
3877 4030 3.562824 TTGTCCGTCGTCGTCGTCG 62.563 63.158 13.54 13.54 44.85 5.12
3878 4031 4.064491 GTCCGTCGTCGTCGTCGT 62.064 66.667 17.80 0.00 44.09 4.34
3879 4032 3.337889 TCCGTCGTCGTCGTCGTT 61.338 61.111 17.80 0.00 44.09 3.85
3880 4033 3.154952 CCGTCGTCGTCGTCGTTG 61.155 66.667 17.80 5.65 44.09 4.10
3881 4034 2.424157 CGTCGTCGTCGTCGTTGT 60.424 61.111 12.51 0.00 41.73 3.32
3882 4035 2.681406 CGTCGTCGTCGTCGTTGTG 61.681 63.158 12.51 0.00 41.73 3.33
3883 4036 2.723271 TCGTCGTCGTCGTTGTGC 60.723 61.111 11.41 0.00 38.33 4.57
3884 4037 4.087079 CGTCGTCGTCGTTGTGCG 62.087 66.667 3.67 0.00 43.01 5.34
3885 4038 3.020665 GTCGTCGTCGTTGTGCGT 61.021 61.111 1.33 0.00 42.13 5.24
3886 4039 2.278077 TCGTCGTCGTTGTGCGTT 60.278 55.556 1.33 0.00 42.13 4.84
3887 4040 2.128637 CGTCGTCGTTGTGCGTTG 60.129 61.111 0.00 0.00 42.13 4.10
3888 4041 2.423039 GTCGTCGTTGTGCGTTGC 60.423 61.111 0.00 0.00 42.13 4.17
3889 4042 3.632107 TCGTCGTTGTGCGTTGCC 61.632 61.111 0.00 0.00 42.13 4.52
3890 4043 4.986531 CGTCGTTGTGCGTTGCCG 62.987 66.667 0.00 0.00 42.13 5.69
3891 4044 4.659874 GTCGTTGTGCGTTGCCGG 62.660 66.667 0.00 0.00 42.13 6.13
3922 4075 1.946267 ACGGTTCGTTGGTGATTGC 59.054 52.632 0.00 0.00 36.35 3.56
3923 4076 1.209127 CGGTTCGTTGGTGATTGCC 59.791 57.895 0.00 0.00 0.00 4.52
3924 4077 1.209127 GGTTCGTTGGTGATTGCCG 59.791 57.895 0.00 0.00 0.00 5.69
3925 4078 1.231958 GGTTCGTTGGTGATTGCCGA 61.232 55.000 0.00 0.00 0.00 5.54
3926 4079 0.110373 GTTCGTTGGTGATTGCCGAC 60.110 55.000 0.00 0.00 39.10 4.79
3927 4080 1.231958 TTCGTTGGTGATTGCCGACC 61.232 55.000 0.00 0.00 39.26 4.79
3928 4081 1.671054 CGTTGGTGATTGCCGACCT 60.671 57.895 0.00 0.00 39.26 3.85
3929 4082 1.234615 CGTTGGTGATTGCCGACCTT 61.235 55.000 0.00 0.00 39.26 3.50
3930 4083 0.521735 GTTGGTGATTGCCGACCTTC 59.478 55.000 0.00 0.00 37.02 3.46
3931 4084 0.400213 TTGGTGATTGCCGACCTTCT 59.600 50.000 0.00 0.00 32.98 2.85
3932 4085 0.321564 TGGTGATTGCCGACCTTCTG 60.322 55.000 0.00 0.00 32.98 3.02
3933 4086 0.036388 GGTGATTGCCGACCTTCTGA 60.036 55.000 0.00 0.00 0.00 3.27
3934 4087 1.407437 GGTGATTGCCGACCTTCTGAT 60.407 52.381 0.00 0.00 0.00 2.90
3935 4088 1.936547 GTGATTGCCGACCTTCTGATC 59.063 52.381 0.00 0.00 0.00 2.92
3936 4089 1.833630 TGATTGCCGACCTTCTGATCT 59.166 47.619 0.00 0.00 0.00 2.75
3937 4090 2.208431 GATTGCCGACCTTCTGATCTG 58.792 52.381 0.00 0.00 0.00 2.90
3938 4091 0.250234 TTGCCGACCTTCTGATCTGG 59.750 55.000 0.00 0.00 0.00 3.86
3939 4092 0.614697 TGCCGACCTTCTGATCTGGA 60.615 55.000 0.00 0.00 0.00 3.86
3940 4093 0.755686 GCCGACCTTCTGATCTGGAT 59.244 55.000 0.00 0.00 0.00 3.41
3941 4094 1.270041 GCCGACCTTCTGATCTGGATC 60.270 57.143 3.83 3.83 38.29 3.36
3942 4095 2.034878 CCGACCTTCTGATCTGGATCA 58.965 52.381 12.01 12.01 44.83 2.92
3943 4096 2.632028 CCGACCTTCTGATCTGGATCAT 59.368 50.000 12.82 0.00 45.74 2.45
3944 4097 3.554544 CCGACCTTCTGATCTGGATCATG 60.555 52.174 12.82 8.18 45.74 3.07
3945 4098 3.401182 GACCTTCTGATCTGGATCATGC 58.599 50.000 12.82 0.00 45.74 4.06
3946 4099 2.775960 ACCTTCTGATCTGGATCATGCA 59.224 45.455 12.82 0.00 45.74 3.96
3947 4100 3.139850 CCTTCTGATCTGGATCATGCAC 58.860 50.000 12.82 0.00 45.74 4.57
3948 4101 3.433173 CCTTCTGATCTGGATCATGCACA 60.433 47.826 12.82 0.00 45.74 4.57
3949 4102 4.390264 CTTCTGATCTGGATCATGCACAT 58.610 43.478 12.82 0.00 45.74 3.21
3950 4103 3.740115 TCTGATCTGGATCATGCACATG 58.260 45.455 12.82 4.18 45.74 3.21
3951 4104 2.814336 CTGATCTGGATCATGCACATGG 59.186 50.000 12.82 0.00 45.74 3.66
3952 4105 1.540267 GATCTGGATCATGCACATGGC 59.460 52.381 10.58 0.00 39.24 4.40
3953 4106 0.549469 TCTGGATCATGCACATGGCT 59.451 50.000 10.58 0.00 45.15 4.75
3954 4107 1.064240 TCTGGATCATGCACATGGCTT 60.064 47.619 10.58 0.00 45.15 4.35
3955 4108 1.067060 CTGGATCATGCACATGGCTTG 59.933 52.381 10.58 12.76 46.15 4.01
3956 4109 0.387929 GGATCATGCACATGGCTTGG 59.612 55.000 10.58 0.00 45.17 3.61
3957 4110 1.108776 GATCATGCACATGGCTTGGT 58.891 50.000 10.58 12.29 45.17 3.67
3958 4111 0.821517 ATCATGCACATGGCTTGGTG 59.178 50.000 10.58 2.67 45.17 4.17
3968 4121 4.232310 GCTTGGTGCCTCCTGATC 57.768 61.111 0.00 0.00 37.07 2.92
3969 4122 1.606531 GCTTGGTGCCTCCTGATCT 59.393 57.895 0.00 0.00 37.07 2.75
3970 4123 0.747283 GCTTGGTGCCTCCTGATCTG 60.747 60.000 0.00 0.00 37.07 2.90
3971 4124 0.107312 CTTGGTGCCTCCTGATCTGG 60.107 60.000 12.30 12.30 37.07 3.86
3972 4125 0.842030 TTGGTGCCTCCTGATCTGGT 60.842 55.000 17.33 0.00 37.07 4.00
3973 4126 0.842030 TGGTGCCTCCTGATCTGGTT 60.842 55.000 17.33 0.00 37.07 3.67
3974 4127 0.393537 GGTGCCTCCTGATCTGGTTG 60.394 60.000 17.33 11.07 0.00 3.77
3975 4128 1.028868 GTGCCTCCTGATCTGGTTGC 61.029 60.000 17.33 19.02 0.00 4.17
3976 4129 1.203441 TGCCTCCTGATCTGGTTGCT 61.203 55.000 24.15 0.00 0.00 3.91
3977 4130 0.833287 GCCTCCTGATCTGGTTGCTA 59.167 55.000 17.33 0.00 0.00 3.49
3978 4131 1.419387 GCCTCCTGATCTGGTTGCTAT 59.581 52.381 17.33 0.00 0.00 2.97
3979 4132 2.158696 GCCTCCTGATCTGGTTGCTATT 60.159 50.000 17.33 0.00 0.00 1.73
3980 4133 3.071602 GCCTCCTGATCTGGTTGCTATTA 59.928 47.826 17.33 0.00 0.00 0.98
3981 4134 4.636249 CCTCCTGATCTGGTTGCTATTAC 58.364 47.826 17.33 0.00 0.00 1.89
3982 4135 4.346418 CCTCCTGATCTGGTTGCTATTACT 59.654 45.833 17.33 0.00 0.00 2.24
3983 4136 5.510520 CCTCCTGATCTGGTTGCTATTACTC 60.511 48.000 17.33 0.00 0.00 2.59
3984 4137 4.038042 TCCTGATCTGGTTGCTATTACTCG 59.962 45.833 17.33 0.00 0.00 4.18
3985 4138 4.038042 CCTGATCTGGTTGCTATTACTCGA 59.962 45.833 10.40 0.00 0.00 4.04
3986 4139 4.933330 TGATCTGGTTGCTATTACTCGAC 58.067 43.478 0.00 0.00 0.00 4.20
3987 4140 3.795623 TCTGGTTGCTATTACTCGACC 57.204 47.619 0.00 0.00 37.29 4.79
3988 4141 2.429610 TCTGGTTGCTATTACTCGACCC 59.570 50.000 0.00 0.00 36.19 4.46
3989 4142 2.167693 CTGGTTGCTATTACTCGACCCA 59.832 50.000 0.00 0.00 36.19 4.51
3990 4143 2.769663 TGGTTGCTATTACTCGACCCAT 59.230 45.455 0.00 0.00 36.19 4.00
3991 4144 3.181469 TGGTTGCTATTACTCGACCCATC 60.181 47.826 0.00 0.00 36.19 3.51
4002 4155 3.896317 GACCCATCGACTGCTATCC 57.104 57.895 0.00 0.00 0.00 2.59
4003 4156 1.040646 GACCCATCGACTGCTATCCA 58.959 55.000 0.00 0.00 0.00 3.41
4004 4157 1.620819 GACCCATCGACTGCTATCCAT 59.379 52.381 0.00 0.00 0.00 3.41
4005 4158 2.037772 GACCCATCGACTGCTATCCATT 59.962 50.000 0.00 0.00 0.00 3.16
4006 4159 3.239449 ACCCATCGACTGCTATCCATTA 58.761 45.455 0.00 0.00 0.00 1.90
4007 4160 3.006967 ACCCATCGACTGCTATCCATTAC 59.993 47.826 0.00 0.00 0.00 1.89
4008 4161 3.245797 CCATCGACTGCTATCCATTACG 58.754 50.000 0.00 0.00 0.00 3.18
4009 4162 2.417339 TCGACTGCTATCCATTACGC 57.583 50.000 0.00 0.00 0.00 4.42
4010 4163 1.679153 TCGACTGCTATCCATTACGCA 59.321 47.619 0.00 0.00 0.00 5.24
4011 4164 2.296190 TCGACTGCTATCCATTACGCAT 59.704 45.455 0.00 0.00 0.00 4.73
4012 4165 2.663602 CGACTGCTATCCATTACGCATC 59.336 50.000 0.00 0.00 0.00 3.91
4013 4166 3.612717 CGACTGCTATCCATTACGCATCT 60.613 47.826 0.00 0.00 0.00 2.90
4014 4167 4.379499 CGACTGCTATCCATTACGCATCTA 60.379 45.833 0.00 0.00 0.00 1.98
4015 4168 5.065704 ACTGCTATCCATTACGCATCTAG 57.934 43.478 0.00 0.00 0.00 2.43
4016 4169 4.081972 ACTGCTATCCATTACGCATCTAGG 60.082 45.833 0.00 0.00 0.00 3.02
4017 4170 3.195610 TGCTATCCATTACGCATCTAGGG 59.804 47.826 0.00 0.00 0.00 3.53
4018 4171 3.195825 GCTATCCATTACGCATCTAGGGT 59.804 47.826 0.00 0.00 46.24 4.34
4019 4172 4.401519 GCTATCCATTACGCATCTAGGGTA 59.598 45.833 0.00 0.00 43.86 3.69
4020 4173 5.069251 GCTATCCATTACGCATCTAGGGTAT 59.931 44.000 0.00 0.00 44.03 2.73
4021 4174 6.407074 GCTATCCATTACGCATCTAGGGTATT 60.407 42.308 0.00 0.00 44.03 1.89
4022 4175 7.201884 GCTATCCATTACGCATCTAGGGTATTA 60.202 40.741 0.00 0.00 44.03 0.98
4023 4176 6.921486 TCCATTACGCATCTAGGGTATTAA 57.079 37.500 0.00 0.00 44.03 1.40
4024 4177 6.931838 TCCATTACGCATCTAGGGTATTAAG 58.068 40.000 0.00 0.00 44.03 1.85
4025 4178 6.495872 TCCATTACGCATCTAGGGTATTAAGT 59.504 38.462 0.00 0.00 44.03 2.24
4026 4179 7.015877 TCCATTACGCATCTAGGGTATTAAGTT 59.984 37.037 0.00 0.00 44.03 2.66
4027 4180 7.331193 CCATTACGCATCTAGGGTATTAAGTTC 59.669 40.741 0.00 0.00 44.03 3.01
4028 4181 5.864418 ACGCATCTAGGGTATTAAGTTCA 57.136 39.130 0.00 0.00 42.24 3.18
4029 4182 6.420913 ACGCATCTAGGGTATTAAGTTCAT 57.579 37.500 0.00 0.00 42.24 2.57
4030 4183 6.223852 ACGCATCTAGGGTATTAAGTTCATG 58.776 40.000 0.00 0.00 42.24 3.07
4031 4184 6.041637 ACGCATCTAGGGTATTAAGTTCATGA 59.958 38.462 0.00 0.00 42.24 3.07
4032 4185 6.366332 CGCATCTAGGGTATTAAGTTCATGAC 59.634 42.308 0.00 0.00 0.00 3.06
4033 4186 7.217200 GCATCTAGGGTATTAAGTTCATGACA 58.783 38.462 0.00 0.00 0.00 3.58
4034 4187 7.715249 GCATCTAGGGTATTAAGTTCATGACAA 59.285 37.037 0.00 0.00 0.00 3.18
4035 4188 9.613428 CATCTAGGGTATTAAGTTCATGACAAA 57.387 33.333 0.00 0.00 0.00 2.83
4040 4193 9.838339 AGGGTATTAAGTTCATGACAAATAGAG 57.162 33.333 0.00 0.00 0.00 2.43
4041 4194 9.614792 GGGTATTAAGTTCATGACAAATAGAGT 57.385 33.333 0.00 0.00 0.00 3.24
4047 4200 8.902540 AAGTTCATGACAAATAGAGTAACACA 57.097 30.769 0.00 0.00 0.00 3.72
4048 4201 8.902540 AGTTCATGACAAATAGAGTAACACAA 57.097 30.769 0.00 0.00 0.00 3.33
4049 4202 9.507329 AGTTCATGACAAATAGAGTAACACAAT 57.493 29.630 0.00 0.00 0.00 2.71
4050 4203 9.546909 GTTCATGACAAATAGAGTAACACAATG 57.453 33.333 0.00 0.00 0.00 2.82
4051 4204 8.846943 TCATGACAAATAGAGTAACACAATGT 57.153 30.769 0.00 0.00 0.00 2.71
4052 4205 9.936759 TCATGACAAATAGAGTAACACAATGTA 57.063 29.630 0.00 0.00 0.00 2.29
4055 4208 9.419297 TGACAAATAGAGTAACACAATGTAGAC 57.581 33.333 0.00 0.00 0.00 2.59
4056 4209 9.419297 GACAAATAGAGTAACACAATGTAGACA 57.581 33.333 0.00 0.00 0.00 3.41
4057 4210 9.424319 ACAAATAGAGTAACACAATGTAGACAG 57.576 33.333 0.00 0.00 0.00 3.51
4058 4211 9.639601 CAAATAGAGTAACACAATGTAGACAGA 57.360 33.333 0.00 0.00 0.00 3.41
4060 4213 9.862371 AATAGAGTAACACAATGTAGACAGAAG 57.138 33.333 0.00 0.00 0.00 2.85
4061 4214 7.526142 AGAGTAACACAATGTAGACAGAAGA 57.474 36.000 0.00 0.00 0.00 2.87
4062 4215 7.952671 AGAGTAACACAATGTAGACAGAAGAA 58.047 34.615 0.00 0.00 0.00 2.52
4063 4216 8.421784 AGAGTAACACAATGTAGACAGAAGAAA 58.578 33.333 0.00 0.00 0.00 2.52
4064 4217 8.958119 AGTAACACAATGTAGACAGAAGAAAA 57.042 30.769 0.00 0.00 0.00 2.29
4065 4218 9.561069 AGTAACACAATGTAGACAGAAGAAAAT 57.439 29.630 0.00 0.00 0.00 1.82
4066 4219 9.813080 GTAACACAATGTAGACAGAAGAAAATC 57.187 33.333 0.00 0.00 0.00 2.17
4067 4220 8.450578 AACACAATGTAGACAGAAGAAAATCA 57.549 30.769 0.00 0.00 0.00 2.57
4068 4221 8.450578 ACACAATGTAGACAGAAGAAAATCAA 57.549 30.769 0.00 0.00 0.00 2.57
4069 4222 8.902806 ACACAATGTAGACAGAAGAAAATCAAA 58.097 29.630 0.00 0.00 0.00 2.69
4070 4223 9.173939 CACAATGTAGACAGAAGAAAATCAAAC 57.826 33.333 0.00 0.00 0.00 2.93
4071 4224 8.902806 ACAATGTAGACAGAAGAAAATCAAACA 58.097 29.630 0.00 0.00 0.00 2.83
4072 4225 9.734620 CAATGTAGACAGAAGAAAATCAAACAA 57.265 29.630 0.00 0.00 0.00 2.83
4090 4243 9.748708 ATCAAACAATATGATTAAATCCCGTTG 57.251 29.630 0.00 0.00 33.84 4.10
4091 4244 8.744652 TCAAACAATATGATTAAATCCCGTTGT 58.255 29.630 0.00 0.00 31.64 3.32
4092 4245 9.364989 CAAACAATATGATTAAATCCCGTTGTT 57.635 29.630 0.00 0.00 37.40 2.83
4093 4246 8.925161 AACAATATGATTAAATCCCGTTGTTG 57.075 30.769 10.10 0.00 35.98 3.33
4094 4247 8.062065 ACAATATGATTAAATCCCGTTGTTGT 57.938 30.769 0.00 0.00 0.00 3.32
4095 4248 9.179909 ACAATATGATTAAATCCCGTTGTTGTA 57.820 29.630 0.00 0.00 0.00 2.41
4096 4249 9.445786 CAATATGATTAAATCCCGTTGTTGTAC 57.554 33.333 0.00 0.00 0.00 2.90
4097 4250 5.883503 TGATTAAATCCCGTTGTTGTACC 57.116 39.130 0.00 0.00 0.00 3.34
4098 4251 5.562635 TGATTAAATCCCGTTGTTGTACCT 58.437 37.500 0.00 0.00 0.00 3.08
4099 4252 6.005198 TGATTAAATCCCGTTGTTGTACCTT 58.995 36.000 0.00 0.00 0.00 3.50
4100 4253 6.490721 TGATTAAATCCCGTTGTTGTACCTTT 59.509 34.615 0.00 0.00 0.00 3.11
4101 4254 7.664731 TGATTAAATCCCGTTGTTGTACCTTTA 59.335 33.333 0.00 0.00 0.00 1.85
4102 4255 5.952526 AAATCCCGTTGTTGTACCTTTAG 57.047 39.130 0.00 0.00 0.00 1.85
4103 4256 4.628963 ATCCCGTTGTTGTACCTTTAGT 57.371 40.909 0.00 0.00 0.00 2.24
4104 4257 5.743636 ATCCCGTTGTTGTACCTTTAGTA 57.256 39.130 0.00 0.00 0.00 1.82
4105 4258 5.138125 TCCCGTTGTTGTACCTTTAGTAG 57.862 43.478 0.00 0.00 0.00 2.57
4106 4259 3.681417 CCCGTTGTTGTACCTTTAGTAGC 59.319 47.826 0.00 0.00 0.00 3.58
4107 4260 4.309099 CCGTTGTTGTACCTTTAGTAGCA 58.691 43.478 0.00 0.00 0.00 3.49
4108 4261 4.751098 CCGTTGTTGTACCTTTAGTAGCAA 59.249 41.667 0.00 0.00 0.00 3.91
4109 4262 5.333568 CCGTTGTTGTACCTTTAGTAGCAAC 60.334 44.000 0.00 0.00 40.08 4.17
4110 4263 5.234757 CGTTGTTGTACCTTTAGTAGCAACA 59.765 40.000 12.62 12.62 43.40 3.33
4111 4264 6.238157 CGTTGTTGTACCTTTAGTAGCAACAA 60.238 38.462 18.70 18.70 46.42 2.83
4112 4265 7.811117 TTGTTGTACCTTTAGTAGCAACAAT 57.189 32.000 18.70 0.00 45.39 2.71
4113 4266 8.905660 TTGTTGTACCTTTAGTAGCAACAATA 57.094 30.769 18.70 8.01 45.39 1.90
4114 4267 8.314143 TGTTGTACCTTTAGTAGCAACAATAC 57.686 34.615 13.54 0.00 42.86 1.89
4115 4268 7.932491 TGTTGTACCTTTAGTAGCAACAATACA 59.068 33.333 13.54 0.00 42.86 2.29
4116 4269 8.776470 GTTGTACCTTTAGTAGCAACAATACAA 58.224 33.333 0.00 0.00 39.79 2.41
4117 4270 8.542497 TGTACCTTTAGTAGCAACAATACAAG 57.458 34.615 0.00 0.00 0.00 3.16
4118 4271 8.369424 TGTACCTTTAGTAGCAACAATACAAGA 58.631 33.333 0.00 0.00 0.00 3.02
4119 4272 7.668525 ACCTTTAGTAGCAACAATACAAGAC 57.331 36.000 0.00 0.00 0.00 3.01
4120 4273 6.367969 ACCTTTAGTAGCAACAATACAAGACG 59.632 38.462 0.00 0.00 0.00 4.18
4121 4274 6.367969 CCTTTAGTAGCAACAATACAAGACGT 59.632 38.462 0.00 0.00 0.00 4.34
4122 4275 6.699895 TTAGTAGCAACAATACAAGACGTG 57.300 37.500 0.00 0.00 0.00 4.49
4123 4276 2.969443 AGCAACAATACAAGACGTGC 57.031 45.000 0.00 0.00 0.00 5.34
4124 4277 1.535462 AGCAACAATACAAGACGTGCC 59.465 47.619 0.00 0.00 0.00 5.01
4125 4278 1.535462 GCAACAATACAAGACGTGCCT 59.465 47.619 0.00 0.00 0.00 4.75
4126 4279 2.412847 GCAACAATACAAGACGTGCCTC 60.413 50.000 0.00 0.00 0.00 4.70
4127 4280 1.710013 ACAATACAAGACGTGCCTCG 58.290 50.000 0.00 0.00 46.00 4.63
4128 4281 0.370273 CAATACAAGACGTGCCTCGC 59.630 55.000 0.00 0.00 44.19 5.03
4129 4282 0.037697 AATACAAGACGTGCCTCGCA 60.038 50.000 0.00 0.00 44.19 5.10
4130 4283 0.458543 ATACAAGACGTGCCTCGCAG 60.459 55.000 0.00 0.00 40.08 5.18
4131 4284 3.782244 CAAGACGTGCCTCGCAGC 61.782 66.667 0.00 0.00 40.08 5.25
4132 4285 3.996124 AAGACGTGCCTCGCAGCT 61.996 61.111 0.00 0.00 40.08 4.24
4133 4286 4.731612 AGACGTGCCTCGCAGCTG 62.732 66.667 10.11 10.11 40.08 4.24
4137 4290 3.418068 GTGCCTCGCAGCTGTCAC 61.418 66.667 16.64 11.60 40.08 3.67
4138 4291 3.619767 TGCCTCGCAGCTGTCACT 61.620 61.111 16.64 0.00 33.32 3.41
4139 4292 3.117171 GCCTCGCAGCTGTCACTG 61.117 66.667 16.64 1.88 40.80 3.66
4140 4293 2.433838 CCTCGCAGCTGTCACTGG 60.434 66.667 16.64 7.23 38.16 4.00
4143 4296 3.046087 CGCAGCTGTCACTGGGTG 61.046 66.667 16.64 0.00 43.54 4.61
4144 4297 2.427320 GCAGCTGTCACTGGGTGA 59.573 61.111 16.64 0.00 40.50 4.02
4145 4298 1.670406 GCAGCTGTCACTGGGTGAG 60.670 63.158 16.64 0.00 43.57 3.51
4146 4299 1.004080 CAGCTGTCACTGGGTGAGG 60.004 63.158 5.25 0.00 43.57 3.86
4147 4300 1.152247 AGCTGTCACTGGGTGAGGA 60.152 57.895 0.27 0.00 43.57 3.71
4148 4301 1.004440 GCTGTCACTGGGTGAGGAC 60.004 63.158 0.27 0.00 43.57 3.85
4149 4302 1.290324 CTGTCACTGGGTGAGGACG 59.710 63.158 0.27 0.00 43.57 4.79
4150 4303 2.048127 GTCACTGGGTGAGGACGC 60.048 66.667 0.27 0.00 43.57 5.19
4151 4304 3.311110 TCACTGGGTGAGGACGCC 61.311 66.667 0.00 0.00 45.07 5.68
4152 4305 4.742201 CACTGGGTGAGGACGCCG 62.742 72.222 0.00 0.00 46.58 6.46
4156 4309 4.452733 GGGTGAGGACGCCGGAAG 62.453 72.222 5.05 0.00 46.58 3.46
4157 4310 3.379445 GGTGAGGACGCCGGAAGA 61.379 66.667 5.05 0.00 36.93 2.87
4158 4311 2.722201 GGTGAGGACGCCGGAAGAT 61.722 63.158 5.05 0.00 36.93 2.40
4159 4312 1.227002 GTGAGGACGCCGGAAGATC 60.227 63.158 5.05 0.00 0.00 2.75
4160 4313 2.026301 GAGGACGCCGGAAGATCG 59.974 66.667 5.05 0.00 0.00 3.69
4161 4314 2.439701 AGGACGCCGGAAGATCGA 60.440 61.111 5.05 0.00 0.00 3.59
4162 4315 2.001361 GAGGACGCCGGAAGATCGAA 62.001 60.000 5.05 0.00 0.00 3.71
4163 4316 1.877165 GGACGCCGGAAGATCGAAC 60.877 63.158 5.05 0.00 0.00 3.95
4164 4317 1.877165 GACGCCGGAAGATCGAACC 60.877 63.158 5.05 0.00 0.00 3.62
4165 4318 2.585247 CGCCGGAAGATCGAACCC 60.585 66.667 5.05 0.00 0.00 4.11
4166 4319 2.582436 GCCGGAAGATCGAACCCA 59.418 61.111 5.05 0.00 0.00 4.51
4167 4320 1.814169 GCCGGAAGATCGAACCCAC 60.814 63.158 5.05 0.00 0.00 4.61
4168 4321 1.898154 CCGGAAGATCGAACCCACT 59.102 57.895 0.00 0.00 0.00 4.00
4169 4322 1.108776 CCGGAAGATCGAACCCACTA 58.891 55.000 0.00 0.00 0.00 2.74
4170 4323 1.202382 CCGGAAGATCGAACCCACTAC 60.202 57.143 0.00 0.00 0.00 2.73
4171 4324 1.475280 CGGAAGATCGAACCCACTACA 59.525 52.381 0.00 0.00 0.00 2.74
4172 4325 2.094390 CGGAAGATCGAACCCACTACAA 60.094 50.000 0.00 0.00 0.00 2.41
4173 4326 3.615592 CGGAAGATCGAACCCACTACAAA 60.616 47.826 0.00 0.00 0.00 2.83
4174 4327 3.933332 GGAAGATCGAACCCACTACAAAG 59.067 47.826 0.00 0.00 0.00 2.77
4175 4328 2.973945 AGATCGAACCCACTACAAAGC 58.026 47.619 0.00 0.00 0.00 3.51
4176 4329 2.301870 AGATCGAACCCACTACAAAGCA 59.698 45.455 0.00 0.00 0.00 3.91
4177 4330 1.873698 TCGAACCCACTACAAAGCAC 58.126 50.000 0.00 0.00 0.00 4.40
4178 4331 1.139256 TCGAACCCACTACAAAGCACA 59.861 47.619 0.00 0.00 0.00 4.57
4179 4332 2.151202 CGAACCCACTACAAAGCACAT 58.849 47.619 0.00 0.00 0.00 3.21
4180 4333 2.159627 CGAACCCACTACAAAGCACATC 59.840 50.000 0.00 0.00 0.00 3.06
4181 4334 3.412386 GAACCCACTACAAAGCACATCT 58.588 45.455 0.00 0.00 0.00 2.90
4182 4335 3.059352 ACCCACTACAAAGCACATCTC 57.941 47.619 0.00 0.00 0.00 2.75
4183 4336 2.290323 ACCCACTACAAAGCACATCTCC 60.290 50.000 0.00 0.00 0.00 3.71
4184 4337 2.026822 CCCACTACAAAGCACATCTCCT 60.027 50.000 0.00 0.00 0.00 3.69
4185 4338 3.197766 CCCACTACAAAGCACATCTCCTA 59.802 47.826 0.00 0.00 0.00 2.94
4186 4339 4.184629 CCACTACAAAGCACATCTCCTAC 58.815 47.826 0.00 0.00 0.00 3.18
4187 4340 4.081420 CCACTACAAAGCACATCTCCTACT 60.081 45.833 0.00 0.00 0.00 2.57
4188 4341 4.867047 CACTACAAAGCACATCTCCTACTG 59.133 45.833 0.00 0.00 0.00 2.74
4189 4342 4.772624 ACTACAAAGCACATCTCCTACTGA 59.227 41.667 0.00 0.00 0.00 3.41
4190 4343 4.623932 ACAAAGCACATCTCCTACTGAA 57.376 40.909 0.00 0.00 0.00 3.02
4191 4344 4.573900 ACAAAGCACATCTCCTACTGAAG 58.426 43.478 0.00 0.00 0.00 3.02
4192 4345 4.284490 ACAAAGCACATCTCCTACTGAAGA 59.716 41.667 0.00 0.00 0.00 2.87
4193 4346 5.046014 ACAAAGCACATCTCCTACTGAAGAT 60.046 40.000 0.00 0.00 0.00 2.40
4194 4347 6.155221 ACAAAGCACATCTCCTACTGAAGATA 59.845 38.462 0.00 0.00 0.00 1.98
4195 4348 6.798427 AAGCACATCTCCTACTGAAGATAA 57.202 37.500 0.00 0.00 0.00 1.75
4196 4349 6.798427 AGCACATCTCCTACTGAAGATAAA 57.202 37.500 0.00 0.00 0.00 1.40
4197 4350 7.372260 AGCACATCTCCTACTGAAGATAAAT 57.628 36.000 0.00 0.00 0.00 1.40
4198 4351 7.441017 AGCACATCTCCTACTGAAGATAAATC 58.559 38.462 0.00 0.00 0.00 2.17
4199 4352 7.070447 AGCACATCTCCTACTGAAGATAAATCA 59.930 37.037 0.00 0.00 0.00 2.57
4200 4353 7.712639 GCACATCTCCTACTGAAGATAAATCAA 59.287 37.037 0.00 0.00 0.00 2.57
4201 4354 9.775854 CACATCTCCTACTGAAGATAAATCAAT 57.224 33.333 0.00 0.00 0.00 2.57
4202 4355 9.995003 ACATCTCCTACTGAAGATAAATCAATC 57.005 33.333 0.00 0.00 0.00 2.67
4210 4363 8.443953 ACTGAAGATAAATCAATCTAGTTGGC 57.556 34.615 5.57 0.00 38.39 4.52
4211 4364 7.500559 ACTGAAGATAAATCAATCTAGTTGGCC 59.499 37.037 0.00 0.00 38.39 5.36
4212 4365 7.345691 TGAAGATAAATCAATCTAGTTGGCCA 58.654 34.615 0.00 0.00 38.39 5.36
4213 4366 7.833682 TGAAGATAAATCAATCTAGTTGGCCAA 59.166 33.333 16.05 16.05 38.39 4.52
4214 4367 8.593945 AAGATAAATCAATCTAGTTGGCCAAA 57.406 30.769 22.47 4.55 38.39 3.28
4215 4368 8.000780 AGATAAATCAATCTAGTTGGCCAAAC 57.999 34.615 22.47 14.58 38.39 2.93
4216 4369 5.405935 AAATCAATCTAGTTGGCCAAACC 57.594 39.130 22.47 9.13 39.85 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
563 564 5.756347 GTGAACCTATATGTAATGCAACGGA 59.244 40.000 0.00 0.00 0.00 4.69
572 573 5.898972 AGGGGTAACGTGAACCTATATGTAA 59.101 40.000 7.02 0.00 37.18 2.41
573 574 5.457686 AGGGGTAACGTGAACCTATATGTA 58.542 41.667 7.02 0.00 37.18 2.29
574 575 4.292643 AGGGGTAACGTGAACCTATATGT 58.707 43.478 7.02 0.00 37.18 2.29
635 636 0.673437 GATTCTCCCTCAGAGCCTCG 59.327 60.000 0.00 0.00 42.90 4.63
638 639 1.416030 GAAGGATTCTCCCTCAGAGCC 59.584 57.143 0.00 0.00 43.23 4.70
639 640 1.416030 GGAAGGATTCTCCCTCAGAGC 59.584 57.143 0.00 0.00 46.56 4.09
653 654 3.054802 GCTTTCTTCTGATCAGGGAAGGA 60.055 47.826 27.82 17.95 39.30 3.36
657 658 3.448934 AGAGCTTTCTTCTGATCAGGGA 58.551 45.455 22.42 16.97 0.00 4.20
667 668 3.051081 TCTTGGCAGAGAGCTTTCTTC 57.949 47.619 3.54 0.00 44.79 2.87
682 683 6.075762 TCAGATTTCACACAACAATCTTGG 57.924 37.500 0.00 0.00 35.48 3.61
688 689 5.417266 TGAGGTTTCAGATTTCACACAACAA 59.583 36.000 0.00 0.00 0.00 2.83
689 690 4.946772 TGAGGTTTCAGATTTCACACAACA 59.053 37.500 0.00 0.00 0.00 3.33
690 691 5.499139 TGAGGTTTCAGATTTCACACAAC 57.501 39.130 0.00 0.00 0.00 3.32
708 709 4.731773 GCAAGAATATTTGCGAGGTTGAGG 60.732 45.833 0.00 0.00 43.36 3.86
740 741 3.443045 CAGTGGGCGGTGGCATTC 61.443 66.667 0.00 0.00 42.47 2.67
779 780 2.139118 TCGATGAAATGTGTGCGTGAA 58.861 42.857 0.00 0.00 0.00 3.18
780 781 1.789506 TCGATGAAATGTGTGCGTGA 58.210 45.000 0.00 0.00 0.00 4.35
820 824 3.388676 GGATGAATTGGCATTGGGATGAA 59.611 43.478 0.00 0.00 35.16 2.57
826 830 1.269413 GCGAGGATGAATTGGCATTGG 60.269 52.381 0.00 0.00 0.00 3.16
892 898 7.419750 GGTGTTATCATGGAAGGGTAATCAGTA 60.420 40.741 0.00 0.00 0.00 2.74
894 900 5.765182 GGTGTTATCATGGAAGGGTAATCAG 59.235 44.000 0.00 0.00 0.00 2.90
901 907 3.492102 ATCGGTGTTATCATGGAAGGG 57.508 47.619 0.00 0.00 0.00 3.95
905 911 4.196193 GGTGAAATCGGTGTTATCATGGA 58.804 43.478 0.00 0.00 0.00 3.41
957 968 0.802607 GCTTAGCTTCACCGGACTCG 60.803 60.000 9.46 0.00 0.00 4.18
1575 1615 1.354101 TGTACCCGGTCATTGTCCTT 58.646 50.000 0.00 0.00 0.00 3.36
1763 1890 3.591254 AACGCGAGGCAGAAGTCCC 62.591 63.158 15.93 0.00 0.00 4.46
2127 2260 3.429141 GTGACGGAGCGGTCGAGA 61.429 66.667 8.77 0.00 39.83 4.04
2439 2572 2.804828 CTTTCCTCCGCTCCCGCTTT 62.805 60.000 0.00 0.00 0.00 3.51
2523 2656 1.436195 GCAATGCCGAGACGCCATTA 61.436 55.000 0.00 0.00 0.00 1.90
3278 3420 1.064758 AGTGAAGCCAACTGTCCAACA 60.065 47.619 0.00 0.00 0.00 3.33
3339 3481 4.580167 CACATCAACAACCTTCTCTTCCAA 59.420 41.667 0.00 0.00 0.00 3.53
3370 3514 3.379865 TACTCGTGGAATGGCGGCC 62.380 63.158 13.32 13.32 0.00 6.13
3377 3521 0.172803 GTCCGCTGTACTCGTGGAAT 59.827 55.000 16.19 0.00 42.22 3.01
3386 3530 3.659089 ATGCCCACGTCCGCTGTAC 62.659 63.158 5.09 0.00 0.00 2.90
3388 3532 4.760047 GATGCCCACGTCCGCTGT 62.760 66.667 5.09 0.00 0.00 4.40
3390 3534 4.148825 GAGATGCCCACGTCCGCT 62.149 66.667 5.09 0.00 31.66 5.52
3408 3552 3.939740 ACTATCATCTTGCATGTGGGT 57.060 42.857 0.00 0.00 0.00 4.51
3409 3553 3.243301 GCAACTATCATCTTGCATGTGGG 60.243 47.826 0.00 0.00 42.05 4.61
3416 3560 1.869767 CCTCGGCAACTATCATCTTGC 59.130 52.381 0.00 0.00 41.79 4.01
3439 3583 1.139853 GAGTGGGGCAGGTTAGATCAG 59.860 57.143 0.00 0.00 0.00 2.90
3458 3608 9.685276 AATATGATTGAGTTCATGGTACTTTGA 57.315 29.630 0.00 0.00 36.97 2.69
3496 3648 2.888834 AATTCCAAATATGCACCCGC 57.111 45.000 0.00 0.00 39.24 6.13
3497 3649 4.934602 ACAAAAATTCCAAATATGCACCCG 59.065 37.500 0.00 0.00 0.00 5.28
3498 3650 5.704978 ACACAAAAATTCCAAATATGCACCC 59.295 36.000 0.00 0.00 0.00 4.61
3499 3651 6.426328 TCACACAAAAATTCCAAATATGCACC 59.574 34.615 0.00 0.00 0.00 5.01
3500 3652 7.042187 TGTCACACAAAAATTCCAAATATGCAC 60.042 33.333 0.00 0.00 0.00 4.57
3501 3653 6.988580 TGTCACACAAAAATTCCAAATATGCA 59.011 30.769 0.00 0.00 0.00 3.96
3502 3654 7.418840 TGTCACACAAAAATTCCAAATATGC 57.581 32.000 0.00 0.00 0.00 3.14
3503 3655 8.497554 CCTTGTCACACAAAAATTCCAAATATG 58.502 33.333 0.00 0.00 37.69 1.78
3504 3656 7.173047 GCCTTGTCACACAAAAATTCCAAATAT 59.827 33.333 0.00 0.00 37.69 1.28
3505 3657 6.481644 GCCTTGTCACACAAAAATTCCAAATA 59.518 34.615 0.00 0.00 37.69 1.40
3506 3658 5.296531 GCCTTGTCACACAAAAATTCCAAAT 59.703 36.000 0.00 0.00 37.69 2.32
3507 3659 4.633565 GCCTTGTCACACAAAAATTCCAAA 59.366 37.500 0.00 0.00 37.69 3.28
3508 3660 4.187694 GCCTTGTCACACAAAAATTCCAA 58.812 39.130 0.00 0.00 37.69 3.53
3509 3661 3.736433 CGCCTTGTCACACAAAAATTCCA 60.736 43.478 0.00 0.00 37.69 3.53
3510 3662 2.794350 CGCCTTGTCACACAAAAATTCC 59.206 45.455 0.00 0.00 37.69 3.01
3511 3663 3.701241 TCGCCTTGTCACACAAAAATTC 58.299 40.909 0.00 0.00 37.69 2.17
3512 3664 3.791973 TCGCCTTGTCACACAAAAATT 57.208 38.095 0.00 0.00 37.69 1.82
3523 3675 3.670055 CACACAAAAATGATCGCCTTGTC 59.330 43.478 0.77 0.00 0.00 3.18
3531 3683 5.472148 TCATCTTGCCACACAAAAATGATC 58.528 37.500 0.00 0.00 36.40 2.92
3564 3717 6.648310 ACTCAATTCCTCGTAGCATATCAATG 59.352 38.462 0.00 0.00 36.09 2.82
3601 3754 3.203487 CCCTAACCCCCAAAATAGCTGTA 59.797 47.826 0.00 0.00 0.00 2.74
3605 3758 2.840640 ACCCTAACCCCCAAAATAGC 57.159 50.000 0.00 0.00 0.00 2.97
3609 3762 3.416414 TTGAAACCCTAACCCCCAAAA 57.584 42.857 0.00 0.00 0.00 2.44
3642 3795 7.674471 TGGTATGTATCATCGACAAACAAAA 57.326 32.000 0.00 0.00 0.00 2.44
3661 3814 8.533657 TCAGATGCATTTTGAGATTTTTGGTAT 58.466 29.630 0.00 0.00 0.00 2.73
3681 3834 1.202498 TCGCTTCTGGATGCTCAGATG 60.202 52.381 5.98 8.85 42.57 2.90
3682 3835 1.117994 TCGCTTCTGGATGCTCAGAT 58.882 50.000 5.98 0.00 42.57 2.90
3683 3836 0.174389 GTCGCTTCTGGATGCTCAGA 59.826 55.000 6.84 1.84 41.51 3.27
3684 3837 0.809241 GGTCGCTTCTGGATGCTCAG 60.809 60.000 6.84 0.00 36.17 3.35
3685 3838 1.219124 GGTCGCTTCTGGATGCTCA 59.781 57.895 6.84 0.00 0.00 4.26
3686 3839 1.522580 GGGTCGCTTCTGGATGCTC 60.523 63.158 6.84 1.38 0.00 4.26
3687 3840 2.586792 GGGTCGCTTCTGGATGCT 59.413 61.111 6.84 0.00 0.00 3.79
3688 3841 2.892425 CGGGTCGCTTCTGGATGC 60.892 66.667 0.00 0.00 0.00 3.91
3689 3842 2.202932 CCGGGTCGCTTCTGGATG 60.203 66.667 0.00 0.00 32.49 3.51
3690 3843 2.363795 TCCGGGTCGCTTCTGGAT 60.364 61.111 0.00 0.00 34.95 3.41
3691 3844 3.068691 CTCCGGGTCGCTTCTGGA 61.069 66.667 0.00 0.00 37.34 3.86
3692 3845 3.068691 TCTCCGGGTCGCTTCTGG 61.069 66.667 0.00 0.00 0.00 3.86
3693 3846 2.182030 GTCTCCGGGTCGCTTCTG 59.818 66.667 0.00 0.00 0.00 3.02
3694 3847 3.441290 CGTCTCCGGGTCGCTTCT 61.441 66.667 0.00 0.00 0.00 2.85
3705 3858 2.027751 GACTATGGCGGCGTCTCC 59.972 66.667 14.51 3.70 0.00 3.71
3706 3859 1.299468 CTGACTATGGCGGCGTCTC 60.299 63.158 14.51 1.62 0.00 3.36
3707 3860 2.808315 CTGACTATGGCGGCGTCT 59.192 61.111 14.51 0.21 0.00 4.18
3708 3861 2.907897 AAGCTGACTATGGCGGCGTC 62.908 60.000 7.10 3.62 42.38 5.19
3709 3862 2.907897 GAAGCTGACTATGGCGGCGT 62.908 60.000 9.37 9.32 42.38 5.68
3710 3863 2.202932 AAGCTGACTATGGCGGCG 60.203 61.111 0.51 0.51 42.38 6.46
3711 3864 2.240500 CGAAGCTGACTATGGCGGC 61.241 63.158 0.00 0.00 37.91 6.53
3712 3865 1.592669 CCGAAGCTGACTATGGCGG 60.593 63.158 0.00 0.00 0.00 6.13
3713 3866 0.596083 CTCCGAAGCTGACTATGGCG 60.596 60.000 0.00 0.00 0.00 5.69
3714 3867 0.249657 CCTCCGAAGCTGACTATGGC 60.250 60.000 0.00 0.00 0.00 4.40
3715 3868 0.249657 GCCTCCGAAGCTGACTATGG 60.250 60.000 0.00 0.00 0.00 2.74
3716 3869 0.249657 GGCCTCCGAAGCTGACTATG 60.250 60.000 0.00 0.00 0.00 2.23
3717 3870 1.403687 GGGCCTCCGAAGCTGACTAT 61.404 60.000 0.84 0.00 0.00 2.12
3718 3871 2.058595 GGGCCTCCGAAGCTGACTA 61.059 63.158 0.84 0.00 0.00 2.59
3719 3872 3.394836 GGGCCTCCGAAGCTGACT 61.395 66.667 0.84 0.00 0.00 3.41
3720 3873 3.378399 GAGGGCCTCCGAAGCTGAC 62.378 68.421 23.49 0.00 38.33 3.51
3721 3874 3.077556 GAGGGCCTCCGAAGCTGA 61.078 66.667 23.49 0.00 38.33 4.26
3722 3875 4.168291 GGAGGGCCTCCGAAGCTG 62.168 72.222 35.67 0.00 41.08 4.24
3730 3883 4.475135 GTTGCGAGGGAGGGCCTC 62.475 72.222 25.80 25.80 0.00 4.70
3736 3889 3.952628 GAACGGGGTTGCGAGGGAG 62.953 68.421 0.00 0.00 0.00 4.30
3737 3890 4.011517 GAACGGGGTTGCGAGGGA 62.012 66.667 0.00 0.00 0.00 4.20
3738 3891 4.323477 TGAACGGGGTTGCGAGGG 62.323 66.667 0.00 0.00 0.00 4.30
3739 3892 2.742372 CTGAACGGGGTTGCGAGG 60.742 66.667 0.00 0.00 0.00 4.63
3740 3893 3.423154 GCTGAACGGGGTTGCGAG 61.423 66.667 0.00 0.00 0.00 5.03
3741 3894 3.876589 GAGCTGAACGGGGTTGCGA 62.877 63.158 0.00 0.00 0.00 5.10
3742 3895 3.423154 GAGCTGAACGGGGTTGCG 61.423 66.667 0.00 0.00 0.00 4.85
3743 3896 3.423154 CGAGCTGAACGGGGTTGC 61.423 66.667 0.00 0.00 0.00 4.17
3744 3897 2.027625 GACGAGCTGAACGGGGTTG 61.028 63.158 0.00 0.00 34.93 3.77
3745 3898 2.342648 GACGAGCTGAACGGGGTT 59.657 61.111 0.00 0.00 34.93 4.11
3746 3899 4.052229 CGACGAGCTGAACGGGGT 62.052 66.667 0.00 0.00 34.93 4.95
3806 3959 0.104120 AAAAACCAGGCCAAAGACGC 59.896 50.000 5.01 0.00 0.00 5.19
3825 3978 5.538433 CCAACACCAGGGAAGAATAGAAAAA 59.462 40.000 0.00 0.00 0.00 1.94
3826 3979 5.076873 CCAACACCAGGGAAGAATAGAAAA 58.923 41.667 0.00 0.00 0.00 2.29
3827 3980 4.662278 CCAACACCAGGGAAGAATAGAAA 58.338 43.478 0.00 0.00 0.00 2.52
3828 3981 3.561313 GCCAACACCAGGGAAGAATAGAA 60.561 47.826 0.00 0.00 0.00 2.10
3829 3982 2.026262 GCCAACACCAGGGAAGAATAGA 60.026 50.000 0.00 0.00 0.00 1.98
3830 3983 2.369394 GCCAACACCAGGGAAGAATAG 58.631 52.381 0.00 0.00 0.00 1.73
3831 3984 1.005450 GGCCAACACCAGGGAAGAATA 59.995 52.381 0.00 0.00 0.00 1.75
3832 3985 0.251787 GGCCAACACCAGGGAAGAAT 60.252 55.000 0.00 0.00 0.00 2.40
3833 3986 1.152830 GGCCAACACCAGGGAAGAA 59.847 57.895 0.00 0.00 0.00 2.52
3834 3987 1.360393 AAGGCCAACACCAGGGAAGA 61.360 55.000 5.01 0.00 0.00 2.87
3835 3988 0.895559 GAAGGCCAACACCAGGGAAG 60.896 60.000 5.01 0.00 0.00 3.46
3836 3989 1.152830 GAAGGCCAACACCAGGGAA 59.847 57.895 5.01 0.00 0.00 3.97
3837 3990 1.774217 AGAAGGCCAACACCAGGGA 60.774 57.895 5.01 0.00 0.00 4.20
3838 3991 1.604593 CAGAAGGCCAACACCAGGG 60.605 63.158 5.01 0.00 0.00 4.45
3839 3992 0.038744 ATCAGAAGGCCAACACCAGG 59.961 55.000 5.01 0.00 0.00 4.45
3840 3993 1.915141 AATCAGAAGGCCAACACCAG 58.085 50.000 5.01 0.00 0.00 4.00
3841 3994 1.962807 CAAATCAGAAGGCCAACACCA 59.037 47.619 5.01 0.00 0.00 4.17
3842 3995 1.963515 ACAAATCAGAAGGCCAACACC 59.036 47.619 5.01 0.00 0.00 4.16
3843 3996 2.029918 GGACAAATCAGAAGGCCAACAC 60.030 50.000 5.01 0.00 0.00 3.32
3844 3997 2.238521 GGACAAATCAGAAGGCCAACA 58.761 47.619 5.01 0.00 0.00 3.33
3845 3998 1.200020 CGGACAAATCAGAAGGCCAAC 59.800 52.381 5.01 0.00 0.00 3.77
3846 3999 1.202879 ACGGACAAATCAGAAGGCCAA 60.203 47.619 5.01 0.00 0.00 4.52
3847 4000 0.400213 ACGGACAAATCAGAAGGCCA 59.600 50.000 5.01 0.00 0.00 5.36
3848 4001 1.087501 GACGGACAAATCAGAAGGCC 58.912 55.000 0.00 0.00 0.00 5.19
3849 4002 0.721718 CGACGGACAAATCAGAAGGC 59.278 55.000 0.00 0.00 0.00 4.35
3850 4003 1.993370 GACGACGGACAAATCAGAAGG 59.007 52.381 0.00 0.00 0.00 3.46
3851 4004 1.649171 CGACGACGGACAAATCAGAAG 59.351 52.381 0.00 0.00 35.72 2.85
3852 4005 1.001048 ACGACGACGGACAAATCAGAA 60.001 47.619 12.58 0.00 44.46 3.02
3853 4006 0.594602 ACGACGACGGACAAATCAGA 59.405 50.000 12.58 0.00 44.46 3.27
3854 4007 0.982673 GACGACGACGGACAAATCAG 59.017 55.000 12.58 0.00 44.46 2.90
3855 4008 0.726787 CGACGACGACGGACAAATCA 60.727 55.000 12.58 0.00 44.46 2.57
3856 4009 0.727122 ACGACGACGACGGACAAATC 60.727 55.000 22.36 0.00 44.46 2.17
3857 4010 0.727122 GACGACGACGACGGACAAAT 60.727 55.000 22.36 1.45 44.46 2.32
3858 4011 1.369209 GACGACGACGACGGACAAA 60.369 57.895 22.36 0.00 44.46 2.83
3859 4012 2.249309 GACGACGACGACGGACAA 59.751 61.111 22.36 0.00 44.46 3.18
3865 4018 2.969278 GCACAACGACGACGACGAC 61.969 63.158 25.15 7.02 42.66 4.34
3866 4019 2.723271 GCACAACGACGACGACGA 60.723 61.111 25.15 0.00 42.66 4.20
3904 4057 1.512156 GGCAATCACCAACGAACCGT 61.512 55.000 0.00 0.00 43.97 4.83
3905 4058 1.209127 GGCAATCACCAACGAACCG 59.791 57.895 0.00 0.00 0.00 4.44
3906 4059 1.209127 CGGCAATCACCAACGAACC 59.791 57.895 0.00 0.00 0.00 3.62
3907 4060 0.110373 GTCGGCAATCACCAACGAAC 60.110 55.000 0.00 0.00 35.17 3.95
3908 4061 1.231958 GGTCGGCAATCACCAACGAA 61.232 55.000 0.00 0.00 35.17 3.85
3909 4062 1.669760 GGTCGGCAATCACCAACGA 60.670 57.895 0.00 0.00 32.33 3.85
3910 4063 1.234615 AAGGTCGGCAATCACCAACG 61.235 55.000 0.00 0.00 34.80 4.10
3911 4064 0.521735 GAAGGTCGGCAATCACCAAC 59.478 55.000 0.00 0.00 34.80 3.77
3912 4065 0.400213 AGAAGGTCGGCAATCACCAA 59.600 50.000 0.00 0.00 34.80 3.67
3913 4066 0.321564 CAGAAGGTCGGCAATCACCA 60.322 55.000 0.00 0.00 34.80 4.17
3914 4067 0.036388 TCAGAAGGTCGGCAATCACC 60.036 55.000 0.00 0.00 0.00 4.02
3915 4068 1.936547 GATCAGAAGGTCGGCAATCAC 59.063 52.381 0.00 0.00 0.00 3.06
3916 4069 1.833630 AGATCAGAAGGTCGGCAATCA 59.166 47.619 0.00 0.00 0.00 2.57
3917 4070 2.208431 CAGATCAGAAGGTCGGCAATC 58.792 52.381 0.00 0.00 0.00 2.67
3918 4071 1.134280 CCAGATCAGAAGGTCGGCAAT 60.134 52.381 0.00 0.00 0.00 3.56
3919 4072 0.250234 CCAGATCAGAAGGTCGGCAA 59.750 55.000 0.00 0.00 0.00 4.52
3920 4073 0.614697 TCCAGATCAGAAGGTCGGCA 60.615 55.000 0.00 0.00 0.00 5.69
3921 4074 0.755686 ATCCAGATCAGAAGGTCGGC 59.244 55.000 0.00 0.00 0.00 5.54
3922 4075 2.034878 TGATCCAGATCAGAAGGTCGG 58.965 52.381 6.24 0.00 42.42 4.79
3931 4084 5.340571 AGCCATGTGCATGATCCAGATCA 62.341 47.826 12.50 12.50 44.12 2.92
3932 4085 1.540267 GCCATGTGCATGATCCAGATC 59.460 52.381 13.21 0.47 41.20 2.75
3933 4086 1.145119 AGCCATGTGCATGATCCAGAT 59.855 47.619 13.21 0.00 44.83 2.90
3934 4087 0.549469 AGCCATGTGCATGATCCAGA 59.451 50.000 13.21 0.00 44.83 3.86
3935 4088 1.067060 CAAGCCATGTGCATGATCCAG 59.933 52.381 13.21 0.00 41.13 3.86
3936 4089 1.107945 CAAGCCATGTGCATGATCCA 58.892 50.000 13.21 0.00 41.13 3.41
3937 4090 0.387929 CCAAGCCATGTGCATGATCC 59.612 55.000 13.21 2.44 41.13 3.36
3938 4091 1.108776 ACCAAGCCATGTGCATGATC 58.891 50.000 13.21 5.30 41.13 2.92
3939 4092 0.821517 CACCAAGCCATGTGCATGAT 59.178 50.000 13.21 0.00 41.13 2.45
3940 4093 2.268999 CACCAAGCCATGTGCATGA 58.731 52.632 13.21 0.00 41.13 3.07
3941 4094 4.902308 CACCAAGCCATGTGCATG 57.098 55.556 5.26 5.26 44.83 4.06
3951 4104 0.747283 CAGATCAGGAGGCACCAAGC 60.747 60.000 3.18 0.00 42.04 4.01
3952 4105 0.107312 CCAGATCAGGAGGCACCAAG 60.107 60.000 3.18 0.00 42.04 3.61
3953 4106 0.842030 ACCAGATCAGGAGGCACCAA 60.842 55.000 11.72 0.00 42.04 3.67
3954 4107 0.842030 AACCAGATCAGGAGGCACCA 60.842 55.000 11.72 0.00 42.04 4.17
3955 4108 0.393537 CAACCAGATCAGGAGGCACC 60.394 60.000 11.72 0.00 39.35 5.01
3956 4109 1.028868 GCAACCAGATCAGGAGGCAC 61.029 60.000 11.72 0.00 33.57 5.01
3957 4110 1.203441 AGCAACCAGATCAGGAGGCA 61.203 55.000 20.36 0.00 35.01 4.75
3958 4111 0.833287 TAGCAACCAGATCAGGAGGC 59.167 55.000 11.72 13.04 0.00 4.70
3959 4112 3.853355 AATAGCAACCAGATCAGGAGG 57.147 47.619 11.72 3.45 0.00 4.30
3960 4113 5.537188 GAGTAATAGCAACCAGATCAGGAG 58.463 45.833 11.72 4.20 0.00 3.69
3961 4114 4.038042 CGAGTAATAGCAACCAGATCAGGA 59.962 45.833 11.72 0.00 0.00 3.86
3962 4115 4.038042 TCGAGTAATAGCAACCAGATCAGG 59.962 45.833 1.93 1.93 0.00 3.86
3963 4116 4.979197 GTCGAGTAATAGCAACCAGATCAG 59.021 45.833 0.00 0.00 0.00 2.90
3964 4117 4.202121 GGTCGAGTAATAGCAACCAGATCA 60.202 45.833 0.00 0.00 0.00 2.92
3965 4118 4.299978 GGTCGAGTAATAGCAACCAGATC 58.700 47.826 0.00 0.00 0.00 2.75
3966 4119 3.069729 GGGTCGAGTAATAGCAACCAGAT 59.930 47.826 0.00 0.00 0.00 2.90
3967 4120 2.429610 GGGTCGAGTAATAGCAACCAGA 59.570 50.000 0.00 0.00 0.00 3.86
3968 4121 2.167693 TGGGTCGAGTAATAGCAACCAG 59.832 50.000 0.00 0.00 0.00 4.00
3969 4122 2.181125 TGGGTCGAGTAATAGCAACCA 58.819 47.619 0.00 0.00 0.00 3.67
3970 4123 2.973694 TGGGTCGAGTAATAGCAACC 57.026 50.000 0.00 0.00 0.00 3.77
3984 4137 1.040646 TGGATAGCAGTCGATGGGTC 58.959 55.000 0.00 0.00 0.00 4.46
3985 4138 1.722034 ATGGATAGCAGTCGATGGGT 58.278 50.000 0.00 0.00 0.00 4.51
3986 4139 2.847327 AATGGATAGCAGTCGATGGG 57.153 50.000 0.00 0.00 0.00 4.00
3987 4140 3.245797 CGTAATGGATAGCAGTCGATGG 58.754 50.000 0.00 0.00 0.00 3.51
3988 4141 2.663602 GCGTAATGGATAGCAGTCGATG 59.336 50.000 0.00 0.00 0.00 3.84
3989 4142 2.296190 TGCGTAATGGATAGCAGTCGAT 59.704 45.455 0.00 0.00 34.39 3.59
3990 4143 1.679153 TGCGTAATGGATAGCAGTCGA 59.321 47.619 0.00 0.00 34.39 4.20
3991 4144 2.134201 TGCGTAATGGATAGCAGTCG 57.866 50.000 0.00 0.00 34.39 4.18
3992 4145 3.919216 AGATGCGTAATGGATAGCAGTC 58.081 45.455 0.00 0.00 43.20 3.51
3993 4146 4.081972 CCTAGATGCGTAATGGATAGCAGT 60.082 45.833 0.00 0.00 43.20 4.40
3994 4147 4.428209 CCTAGATGCGTAATGGATAGCAG 58.572 47.826 0.00 0.00 43.20 4.24
3995 4148 3.195610 CCCTAGATGCGTAATGGATAGCA 59.804 47.826 0.00 0.00 44.13 3.49
3996 4149 3.195825 ACCCTAGATGCGTAATGGATAGC 59.804 47.826 0.00 0.00 0.00 2.97
3997 4150 6.716934 ATACCCTAGATGCGTAATGGATAG 57.283 41.667 0.00 0.00 0.00 2.08
3998 4151 8.598202 TTAATACCCTAGATGCGTAATGGATA 57.402 34.615 0.00 0.00 0.00 2.59
3999 4152 7.180408 ACTTAATACCCTAGATGCGTAATGGAT 59.820 37.037 0.00 0.00 0.00 3.41
4000 4153 6.495872 ACTTAATACCCTAGATGCGTAATGGA 59.504 38.462 0.00 0.00 0.00 3.41
4001 4154 6.698380 ACTTAATACCCTAGATGCGTAATGG 58.302 40.000 0.00 0.00 0.00 3.16
4002 4155 7.870954 TGAACTTAATACCCTAGATGCGTAATG 59.129 37.037 0.00 0.00 0.00 1.90
4003 4156 7.959175 TGAACTTAATACCCTAGATGCGTAAT 58.041 34.615 0.00 0.00 0.00 1.89
4004 4157 7.350744 TGAACTTAATACCCTAGATGCGTAA 57.649 36.000 0.00 0.00 0.00 3.18
4005 4158 6.964807 TGAACTTAATACCCTAGATGCGTA 57.035 37.500 0.00 0.00 0.00 4.42
4006 4159 5.864418 TGAACTTAATACCCTAGATGCGT 57.136 39.130 0.00 0.00 0.00 5.24
4007 4160 6.366332 GTCATGAACTTAATACCCTAGATGCG 59.634 42.308 0.00 0.00 0.00 4.73
4008 4161 7.217200 TGTCATGAACTTAATACCCTAGATGC 58.783 38.462 0.00 0.00 0.00 3.91
4009 4162 9.613428 TTTGTCATGAACTTAATACCCTAGATG 57.387 33.333 0.00 0.00 0.00 2.90
4014 4167 9.838339 CTCTATTTGTCATGAACTTAATACCCT 57.162 33.333 0.00 0.00 0.00 4.34
4015 4168 9.614792 ACTCTATTTGTCATGAACTTAATACCC 57.385 33.333 0.00 0.00 0.00 3.69
4021 4174 9.990360 TGTGTTACTCTATTTGTCATGAACTTA 57.010 29.630 0.00 0.00 0.00 2.24
4022 4175 8.902540 TGTGTTACTCTATTTGTCATGAACTT 57.097 30.769 0.00 0.00 0.00 2.66
4023 4176 8.902540 TTGTGTTACTCTATTTGTCATGAACT 57.097 30.769 0.00 0.00 0.00 3.01
4024 4177 9.546909 CATTGTGTTACTCTATTTGTCATGAAC 57.453 33.333 0.00 0.00 0.00 3.18
4025 4178 9.283768 ACATTGTGTTACTCTATTTGTCATGAA 57.716 29.630 0.00 0.00 0.00 2.57
4026 4179 8.846943 ACATTGTGTTACTCTATTTGTCATGA 57.153 30.769 0.00 0.00 0.00 3.07
4029 4182 9.419297 GTCTACATTGTGTTACTCTATTTGTCA 57.581 33.333 0.00 0.00 0.00 3.58
4030 4183 9.419297 TGTCTACATTGTGTTACTCTATTTGTC 57.581 33.333 0.00 0.00 0.00 3.18
4031 4184 9.424319 CTGTCTACATTGTGTTACTCTATTTGT 57.576 33.333 0.00 0.00 0.00 2.83
4032 4185 9.639601 TCTGTCTACATTGTGTTACTCTATTTG 57.360 33.333 0.00 0.00 0.00 2.32
4034 4187 9.862371 CTTCTGTCTACATTGTGTTACTCTATT 57.138 33.333 0.00 0.00 0.00 1.73
4035 4188 9.244292 TCTTCTGTCTACATTGTGTTACTCTAT 57.756 33.333 0.00 0.00 0.00 1.98
4036 4189 8.631480 TCTTCTGTCTACATTGTGTTACTCTA 57.369 34.615 0.00 0.00 0.00 2.43
4037 4190 7.526142 TCTTCTGTCTACATTGTGTTACTCT 57.474 36.000 0.00 0.00 0.00 3.24
4038 4191 8.589335 TTTCTTCTGTCTACATTGTGTTACTC 57.411 34.615 0.00 0.00 0.00 2.59
4039 4192 8.958119 TTTTCTTCTGTCTACATTGTGTTACT 57.042 30.769 0.00 0.00 0.00 2.24
4040 4193 9.813080 GATTTTCTTCTGTCTACATTGTGTTAC 57.187 33.333 0.00 0.00 0.00 2.50
4041 4194 9.554395 TGATTTTCTTCTGTCTACATTGTGTTA 57.446 29.630 0.00 0.00 0.00 2.41
4042 4195 8.450578 TGATTTTCTTCTGTCTACATTGTGTT 57.549 30.769 0.00 0.00 0.00 3.32
4043 4196 8.450578 TTGATTTTCTTCTGTCTACATTGTGT 57.549 30.769 0.00 0.00 0.00 3.72
4044 4197 9.173939 GTTTGATTTTCTTCTGTCTACATTGTG 57.826 33.333 0.00 0.00 0.00 3.33
4045 4198 8.902806 TGTTTGATTTTCTTCTGTCTACATTGT 58.097 29.630 0.00 0.00 0.00 2.71
4046 4199 9.734620 TTGTTTGATTTTCTTCTGTCTACATTG 57.265 29.630 0.00 0.00 0.00 2.82
4064 4217 9.748708 CAACGGGATTTAATCATATTGTTTGAT 57.251 29.630 7.29 0.00 35.35 2.57
4065 4218 8.744652 ACAACGGGATTTAATCATATTGTTTGA 58.255 29.630 7.29 0.00 29.96 2.69
4066 4219 8.925161 ACAACGGGATTTAATCATATTGTTTG 57.075 30.769 7.29 3.16 29.96 2.93
4067 4220 9.364989 CAACAACGGGATTTAATCATATTGTTT 57.635 29.630 20.09 10.27 37.06 2.83
4068 4221 8.527810 ACAACAACGGGATTTAATCATATTGTT 58.472 29.630 18.38 18.38 38.38 2.83
4069 4222 8.062065 ACAACAACGGGATTTAATCATATTGT 57.938 30.769 7.29 9.86 33.27 2.71
4070 4223 9.445786 GTACAACAACGGGATTTAATCATATTG 57.554 33.333 7.29 9.31 0.00 1.90
4071 4224 8.626526 GGTACAACAACGGGATTTAATCATATT 58.373 33.333 7.29 0.00 0.00 1.28
4072 4225 7.996644 AGGTACAACAACGGGATTTAATCATAT 59.003 33.333 7.29 0.00 0.00 1.78
4073 4226 7.340256 AGGTACAACAACGGGATTTAATCATA 58.660 34.615 7.29 0.00 0.00 2.15
4074 4227 6.184789 AGGTACAACAACGGGATTTAATCAT 58.815 36.000 7.29 0.00 0.00 2.45
4075 4228 5.562635 AGGTACAACAACGGGATTTAATCA 58.437 37.500 7.29 0.00 0.00 2.57
4076 4229 6.505044 AAGGTACAACAACGGGATTTAATC 57.495 37.500 0.00 0.00 0.00 1.75
4077 4230 6.904463 AAAGGTACAACAACGGGATTTAAT 57.096 33.333 0.00 0.00 0.00 1.40
4078 4231 6.997476 ACTAAAGGTACAACAACGGGATTTAA 59.003 34.615 0.00 0.00 0.00 1.52
4079 4232 6.532826 ACTAAAGGTACAACAACGGGATTTA 58.467 36.000 0.00 0.00 0.00 1.40
4080 4233 5.379187 ACTAAAGGTACAACAACGGGATTT 58.621 37.500 0.00 0.00 0.00 2.17
4081 4234 4.976864 ACTAAAGGTACAACAACGGGATT 58.023 39.130 0.00 0.00 0.00 3.01
4082 4235 4.628963 ACTAAAGGTACAACAACGGGAT 57.371 40.909 0.00 0.00 0.00 3.85
4083 4236 4.561326 GCTACTAAAGGTACAACAACGGGA 60.561 45.833 0.00 0.00 0.00 5.14
4084 4237 3.681417 GCTACTAAAGGTACAACAACGGG 59.319 47.826 0.00 0.00 0.00 5.28
4085 4238 4.309099 TGCTACTAAAGGTACAACAACGG 58.691 43.478 0.00 0.00 0.00 4.44
4086 4239 5.234757 TGTTGCTACTAAAGGTACAACAACG 59.765 40.000 4.06 0.00 42.28 4.10
4087 4240 6.607735 TGTTGCTACTAAAGGTACAACAAC 57.392 37.500 4.06 0.00 42.28 3.32
4089 4242 7.932491 TGTATTGTTGCTACTAAAGGTACAACA 59.068 33.333 0.00 0.00 42.79 3.33
4090 4243 8.314143 TGTATTGTTGCTACTAAAGGTACAAC 57.686 34.615 0.00 0.00 39.68 3.32
4091 4244 8.905660 TTGTATTGTTGCTACTAAAGGTACAA 57.094 30.769 0.00 2.01 0.00 2.41
4092 4245 8.369424 TCTTGTATTGTTGCTACTAAAGGTACA 58.631 33.333 0.00 0.00 0.00 2.90
4093 4246 8.654215 GTCTTGTATTGTTGCTACTAAAGGTAC 58.346 37.037 0.00 0.00 0.00 3.34
4094 4247 7.543172 CGTCTTGTATTGTTGCTACTAAAGGTA 59.457 37.037 0.00 0.00 0.00 3.08
4095 4248 6.367969 CGTCTTGTATTGTTGCTACTAAAGGT 59.632 38.462 0.00 0.00 0.00 3.50
4096 4249 6.367969 ACGTCTTGTATTGTTGCTACTAAAGG 59.632 38.462 0.00 0.00 0.00 3.11
4097 4250 7.227461 CACGTCTTGTATTGTTGCTACTAAAG 58.773 38.462 0.00 0.00 0.00 1.85
4098 4251 6.347079 GCACGTCTTGTATTGTTGCTACTAAA 60.347 38.462 0.00 0.00 0.00 1.85
4099 4252 5.119588 GCACGTCTTGTATTGTTGCTACTAA 59.880 40.000 0.00 0.00 0.00 2.24
4100 4253 4.624024 GCACGTCTTGTATTGTTGCTACTA 59.376 41.667 0.00 0.00 0.00 1.82
4101 4254 3.432252 GCACGTCTTGTATTGTTGCTACT 59.568 43.478 0.00 0.00 0.00 2.57
4102 4255 3.424433 GGCACGTCTTGTATTGTTGCTAC 60.424 47.826 0.00 0.00 0.00 3.58
4103 4256 2.739913 GGCACGTCTTGTATTGTTGCTA 59.260 45.455 0.00 0.00 0.00 3.49
4104 4257 1.535462 GGCACGTCTTGTATTGTTGCT 59.465 47.619 0.00 0.00 0.00 3.91
4105 4258 1.535462 AGGCACGTCTTGTATTGTTGC 59.465 47.619 0.00 0.00 0.00 4.17
4106 4259 2.159841 CGAGGCACGTCTTGTATTGTTG 60.160 50.000 0.00 0.00 37.22 3.33
4107 4260 2.066262 CGAGGCACGTCTTGTATTGTT 58.934 47.619 0.00 0.00 37.22 2.83
4108 4261 1.710013 CGAGGCACGTCTTGTATTGT 58.290 50.000 0.00 0.00 37.22 2.71
4109 4262 0.370273 GCGAGGCACGTCTTGTATTG 59.630 55.000 6.15 0.00 44.60 1.90
4110 4263 0.037697 TGCGAGGCACGTCTTGTATT 60.038 50.000 6.15 0.00 44.60 1.89
4111 4264 0.458543 CTGCGAGGCACGTCTTGTAT 60.459 55.000 6.15 0.00 44.60 2.29
4112 4265 1.080772 CTGCGAGGCACGTCTTGTA 60.081 57.895 6.15 0.00 44.60 2.41
4113 4266 2.356313 CTGCGAGGCACGTCTTGT 60.356 61.111 6.15 0.00 44.60 3.16
4114 4267 3.782244 GCTGCGAGGCACGTCTTG 61.782 66.667 6.15 0.00 44.60 3.02
4115 4268 3.996124 AGCTGCGAGGCACGTCTT 61.996 61.111 6.15 0.00 44.60 3.01
4116 4269 4.731612 CAGCTGCGAGGCACGTCT 62.732 66.667 0.00 0.00 44.60 4.18
4120 4273 3.418068 GTGACAGCTGCGAGGCAC 61.418 66.667 15.27 16.17 33.79 5.01
4121 4274 3.619767 AGTGACAGCTGCGAGGCA 61.620 61.111 15.27 1.49 36.92 4.75
4122 4275 3.117171 CAGTGACAGCTGCGAGGC 61.117 66.667 15.27 0.00 0.00 4.70
4123 4276 2.433838 CCAGTGACAGCTGCGAGG 60.434 66.667 15.27 5.22 35.28 4.63
4124 4277 2.433838 CCCAGTGACAGCTGCGAG 60.434 66.667 15.27 0.00 35.28 5.03
4125 4278 3.233980 ACCCAGTGACAGCTGCGA 61.234 61.111 15.27 0.00 35.28 5.10
4126 4279 3.046087 CACCCAGTGACAGCTGCG 61.046 66.667 15.27 0.00 35.23 5.18
4127 4280 1.670406 CTCACCCAGTGACAGCTGC 60.670 63.158 15.27 7.45 37.67 5.25
4128 4281 1.004080 CCTCACCCAGTGACAGCTG 60.004 63.158 13.48 13.48 37.67 4.24
4129 4282 1.152247 TCCTCACCCAGTGACAGCT 60.152 57.895 0.00 0.00 37.67 4.24
4130 4283 1.004440 GTCCTCACCCAGTGACAGC 60.004 63.158 0.00 0.00 37.67 4.40
4131 4284 1.290324 CGTCCTCACCCAGTGACAG 59.710 63.158 0.00 0.00 37.67 3.51
4132 4285 2.867855 GCGTCCTCACCCAGTGACA 61.868 63.158 0.00 0.00 37.67 3.58
4133 4286 2.048127 GCGTCCTCACCCAGTGAC 60.048 66.667 0.00 0.00 37.67 3.67
4134 4287 3.311110 GGCGTCCTCACCCAGTGA 61.311 66.667 0.00 0.00 40.50 3.41
4135 4288 4.742201 CGGCGTCCTCACCCAGTG 62.742 72.222 0.00 0.00 34.45 3.66
4139 4292 4.452733 CTTCCGGCGTCCTCACCC 62.453 72.222 6.01 0.00 0.00 4.61
4140 4293 2.630592 GATCTTCCGGCGTCCTCACC 62.631 65.000 6.01 0.00 0.00 4.02
4141 4294 1.227002 GATCTTCCGGCGTCCTCAC 60.227 63.158 6.01 0.00 0.00 3.51
4142 4295 2.771639 CGATCTTCCGGCGTCCTCA 61.772 63.158 6.01 0.00 0.00 3.86
4143 4296 2.001361 TTCGATCTTCCGGCGTCCTC 62.001 60.000 6.01 0.00 0.00 3.71
4144 4297 2.050350 TTCGATCTTCCGGCGTCCT 61.050 57.895 6.01 0.00 0.00 3.85
4145 4298 1.877165 GTTCGATCTTCCGGCGTCC 60.877 63.158 6.01 0.00 0.00 4.79
4146 4299 1.877165 GGTTCGATCTTCCGGCGTC 60.877 63.158 6.01 0.00 0.00 5.19
4147 4300 2.183555 GGTTCGATCTTCCGGCGT 59.816 61.111 6.01 0.00 0.00 5.68
4148 4301 2.585247 GGGTTCGATCTTCCGGCG 60.585 66.667 0.00 0.00 0.00 6.46
4149 4302 1.814169 GTGGGTTCGATCTTCCGGC 60.814 63.158 0.00 0.00 0.00 6.13
4150 4303 1.108776 TAGTGGGTTCGATCTTCCGG 58.891 55.000 0.00 0.00 0.00 5.14
4151 4304 1.475280 TGTAGTGGGTTCGATCTTCCG 59.525 52.381 0.00 0.00 0.00 4.30
4152 4305 3.604875 TTGTAGTGGGTTCGATCTTCC 57.395 47.619 0.00 0.00 0.00 3.46
4153 4306 3.371285 GCTTTGTAGTGGGTTCGATCTTC 59.629 47.826 0.00 0.00 0.00 2.87
4154 4307 3.244422 TGCTTTGTAGTGGGTTCGATCTT 60.244 43.478 0.00 0.00 0.00 2.40
4155 4308 2.301870 TGCTTTGTAGTGGGTTCGATCT 59.698 45.455 0.00 0.00 0.00 2.75
4156 4309 2.415512 GTGCTTTGTAGTGGGTTCGATC 59.584 50.000 0.00 0.00 0.00 3.69
4157 4310 2.224426 TGTGCTTTGTAGTGGGTTCGAT 60.224 45.455 0.00 0.00 0.00 3.59
4158 4311 1.139256 TGTGCTTTGTAGTGGGTTCGA 59.861 47.619 0.00 0.00 0.00 3.71
4159 4312 1.588674 TGTGCTTTGTAGTGGGTTCG 58.411 50.000 0.00 0.00 0.00 3.95
4160 4313 3.412386 AGATGTGCTTTGTAGTGGGTTC 58.588 45.455 0.00 0.00 0.00 3.62
4161 4314 3.412386 GAGATGTGCTTTGTAGTGGGTT 58.588 45.455 0.00 0.00 0.00 4.11
4162 4315 2.290323 GGAGATGTGCTTTGTAGTGGGT 60.290 50.000 0.00 0.00 0.00 4.51
4163 4316 2.026822 AGGAGATGTGCTTTGTAGTGGG 60.027 50.000 0.00 0.00 0.00 4.61
4164 4317 3.340814 AGGAGATGTGCTTTGTAGTGG 57.659 47.619 0.00 0.00 0.00 4.00
4165 4318 4.867047 CAGTAGGAGATGTGCTTTGTAGTG 59.133 45.833 0.00 0.00 0.00 2.74
4166 4319 4.772624 TCAGTAGGAGATGTGCTTTGTAGT 59.227 41.667 0.00 0.00 0.00 2.73
4167 4320 5.330455 TCAGTAGGAGATGTGCTTTGTAG 57.670 43.478 0.00 0.00 0.00 2.74
4168 4321 5.480422 TCTTCAGTAGGAGATGTGCTTTGTA 59.520 40.000 0.00 0.00 0.00 2.41
4169 4322 4.284490 TCTTCAGTAGGAGATGTGCTTTGT 59.716 41.667 0.00 0.00 0.00 2.83
4170 4323 4.825422 TCTTCAGTAGGAGATGTGCTTTG 58.175 43.478 0.00 0.00 0.00 2.77
4171 4324 5.690464 ATCTTCAGTAGGAGATGTGCTTT 57.310 39.130 0.00 0.00 0.00 3.51
4172 4325 6.798427 TTATCTTCAGTAGGAGATGTGCTT 57.202 37.500 0.00 0.00 0.00 3.91
4173 4326 6.798427 TTTATCTTCAGTAGGAGATGTGCT 57.202 37.500 0.00 0.00 0.00 4.40
4174 4327 7.212976 TGATTTATCTTCAGTAGGAGATGTGC 58.787 38.462 0.00 0.00 0.00 4.57
4175 4328 9.775854 ATTGATTTATCTTCAGTAGGAGATGTG 57.224 33.333 0.00 0.00 0.00 3.21
4176 4329 9.995003 GATTGATTTATCTTCAGTAGGAGATGT 57.005 33.333 0.00 0.00 0.00 3.06
4184 4337 9.547753 GCCAACTAGATTGATTTATCTTCAGTA 57.452 33.333 0.00 0.00 41.23 2.74
4185 4338 7.500559 GGCCAACTAGATTGATTTATCTTCAGT 59.499 37.037 0.00 0.00 41.23 3.41
4186 4339 7.500227 TGGCCAACTAGATTGATTTATCTTCAG 59.500 37.037 0.61 0.00 41.23 3.02
4187 4340 7.345691 TGGCCAACTAGATTGATTTATCTTCA 58.654 34.615 0.61 0.00 41.23 3.02
4188 4341 7.807977 TGGCCAACTAGATTGATTTATCTTC 57.192 36.000 0.61 0.00 41.23 2.87
4189 4342 8.470002 GTTTGGCCAACTAGATTGATTTATCTT 58.530 33.333 20.35 0.00 41.23 2.40
4190 4343 7.068716 GGTTTGGCCAACTAGATTGATTTATCT 59.931 37.037 20.35 0.00 41.23 1.98
4191 4344 7.147915 TGGTTTGGCCAACTAGATTGATTTATC 60.148 37.037 20.35 0.00 45.94 1.75
4192 4345 6.667414 TGGTTTGGCCAACTAGATTGATTTAT 59.333 34.615 20.35 0.00 45.94 1.40
4193 4346 6.013379 TGGTTTGGCCAACTAGATTGATTTA 58.987 36.000 20.35 0.00 45.94 1.40
4194 4347 4.837860 TGGTTTGGCCAACTAGATTGATTT 59.162 37.500 20.35 0.00 45.94 2.17
4195 4348 4.415596 TGGTTTGGCCAACTAGATTGATT 58.584 39.130 20.35 0.00 45.94 2.57
4196 4349 4.046286 TGGTTTGGCCAACTAGATTGAT 57.954 40.909 20.35 0.00 45.94 2.57
4197 4350 3.517296 TGGTTTGGCCAACTAGATTGA 57.483 42.857 20.35 0.00 45.94 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.