Multiple sequence alignment - TraesCS1B01G338300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G338300 chr1B 100.000 2642 0 0 1 2642 566443409 566446050 0.000000e+00 4879
1 TraesCS1B01G338300 chr3B 95.632 2175 86 6 475 2642 809548129 809545957 0.000000e+00 3482
2 TraesCS1B01G338300 chr3B 91.945 2185 153 16 475 2642 395900003 395902181 0.000000e+00 3038
3 TraesCS1B01G338300 chr3B 95.633 229 10 0 236 464 754619981 754619753 4.150000e-98 368
4 TraesCS1B01G338300 chr3B 94.118 238 12 2 227 464 606376359 606376124 6.950000e-96 361
5 TraesCS1B01G338300 chr4A 95.306 2173 96 4 476 2642 734359973 734362145 0.000000e+00 3443
6 TraesCS1B01G338300 chr4A 92.767 1825 113 2 819 2642 641475058 641476864 0.000000e+00 2621
7 TraesCS1B01G338300 chr4A 94.872 234 11 1 232 464 577727046 577726813 5.370000e-97 364
8 TraesCS1B01G338300 chr6B 93.594 2170 118 8 476 2642 9292017 9289866 0.000000e+00 3217
9 TraesCS1B01G338300 chr6B 93.321 2171 125 6 476 2642 2207835 2205681 0.000000e+00 3188
10 TraesCS1B01G338300 chr5B 95.586 1903 81 3 741 2642 599380591 599378691 0.000000e+00 3046
11 TraesCS1B01G338300 chr5B 95.793 1046 41 2 476 1520 698441157 698442200 0.000000e+00 1685
12 TraesCS1B01G338300 chr5B 95.690 232 10 0 233 464 141583728 141583959 8.930000e-100 374
13 TraesCS1B01G338300 chr1D 90.625 2176 180 9 476 2642 463446730 463448890 0.000000e+00 2867
14 TraesCS1B01G338300 chr1D 90.541 222 21 0 11 232 419023506 419023727 7.150000e-76 294
15 TraesCS1B01G338300 chr1D 87.556 225 25 2 11 232 419210181 419210405 9.380000e-65 257
16 TraesCS1B01G338300 chr1D 87.143 210 27 0 23 232 418762410 418762619 3.400000e-59 239
17 TraesCS1B01G338300 chr6A 93.268 1827 118 5 819 2642 34324159 34322335 0.000000e+00 2687
18 TraesCS1B01G338300 chr6A 90.228 307 28 2 473 777 34324456 34324150 1.470000e-107 399
19 TraesCS1B01G338300 chr5A 96.104 231 8 1 235 464 683947277 683947047 2.480000e-100 375
20 TraesCS1B01G338300 chr2B 95.319 235 10 1 230 464 597223423 597223190 3.210000e-99 372
21 TraesCS1B01G338300 chr2B 94.894 235 12 0 230 464 389457235 389457001 4.150000e-98 368
22 TraesCS1B01G338300 chr1A 94.894 235 11 1 231 464 537536436 537536670 1.490000e-97 366
23 TraesCS1B01G338300 chr7A 94.515 237 12 1 228 464 21815511 21815746 5.370000e-97 364


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G338300 chr1B 566443409 566446050 2641 False 4879 4879 100.000 1 2642 1 chr1B.!!$F1 2641
1 TraesCS1B01G338300 chr3B 809545957 809548129 2172 True 3482 3482 95.632 475 2642 1 chr3B.!!$R3 2167
2 TraesCS1B01G338300 chr3B 395900003 395902181 2178 False 3038 3038 91.945 475 2642 1 chr3B.!!$F1 2167
3 TraesCS1B01G338300 chr4A 734359973 734362145 2172 False 3443 3443 95.306 476 2642 1 chr4A.!!$F2 2166
4 TraesCS1B01G338300 chr4A 641475058 641476864 1806 False 2621 2621 92.767 819 2642 1 chr4A.!!$F1 1823
5 TraesCS1B01G338300 chr6B 9289866 9292017 2151 True 3217 3217 93.594 476 2642 1 chr6B.!!$R2 2166
6 TraesCS1B01G338300 chr6B 2205681 2207835 2154 True 3188 3188 93.321 476 2642 1 chr6B.!!$R1 2166
7 TraesCS1B01G338300 chr5B 599378691 599380591 1900 True 3046 3046 95.586 741 2642 1 chr5B.!!$R1 1901
8 TraesCS1B01G338300 chr5B 698441157 698442200 1043 False 1685 1685 95.793 476 1520 1 chr5B.!!$F2 1044
9 TraesCS1B01G338300 chr1D 463446730 463448890 2160 False 2867 2867 90.625 476 2642 1 chr1D.!!$F4 2166
10 TraesCS1B01G338300 chr6A 34322335 34324456 2121 True 1543 2687 91.748 473 2642 2 chr6A.!!$R1 2169

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 307 0.107848 ACCCCTATAAGCGCACACAC 60.108 55.0 11.47 0.0 0.0 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1941 1995 0.179062 GAAGCATGGCGAGGTGATCT 60.179 55.0 0.0 0.0 0.0 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.153721 TGAAATTCATTAAATTCCTGACAATGC 57.846 29.630 0.00 0.00 36.54 3.56
29 30 8.496707 AAATTCATTAAATTCCTGACAATGCC 57.503 30.769 0.00 0.00 36.54 4.40
30 31 6.602410 TTCATTAAATTCCTGACAATGCCA 57.398 33.333 0.00 0.00 0.00 4.92
31 32 5.964758 TCATTAAATTCCTGACAATGCCAC 58.035 37.500 0.00 0.00 0.00 5.01
32 33 5.716228 TCATTAAATTCCTGACAATGCCACT 59.284 36.000 0.00 0.00 0.00 4.00
33 34 3.947910 AAATTCCTGACAATGCCACTG 57.052 42.857 0.00 0.00 0.00 3.66
34 35 1.180029 ATTCCTGACAATGCCACTGC 58.820 50.000 0.00 0.00 38.26 4.40
43 44 3.573229 TGCCACTGCAAGGGAGCT 61.573 61.111 7.47 0.00 43.23 4.09
44 45 2.749441 GCCACTGCAAGGGAGCTC 60.749 66.667 4.71 4.71 43.23 4.09
45 46 3.076092 CCACTGCAAGGGAGCTCT 58.924 61.111 14.64 0.00 43.23 4.09
46 47 1.078567 CCACTGCAAGGGAGCTCTC 60.079 63.158 14.64 10.30 43.23 3.20
47 48 1.551908 CCACTGCAAGGGAGCTCTCT 61.552 60.000 11.38 11.38 43.23 3.10
48 49 1.189752 CACTGCAAGGGAGCTCTCTA 58.810 55.000 18.65 0.00 43.23 2.43
49 50 1.136695 CACTGCAAGGGAGCTCTCTAG 59.863 57.143 18.65 13.59 43.23 2.43
50 51 1.006519 ACTGCAAGGGAGCTCTCTAGA 59.993 52.381 18.65 2.56 39.30 2.43
51 52 2.318908 CTGCAAGGGAGCTCTCTAGAT 58.681 52.381 18.65 0.00 34.99 1.98
52 53 3.117322 ACTGCAAGGGAGCTCTCTAGATA 60.117 47.826 18.65 3.05 39.30 1.98
53 54 3.894427 CTGCAAGGGAGCTCTCTAGATAA 59.106 47.826 18.65 0.26 34.99 1.75
54 55 4.290093 TGCAAGGGAGCTCTCTAGATAAA 58.710 43.478 18.65 0.00 34.99 1.40
55 56 4.904251 TGCAAGGGAGCTCTCTAGATAAAT 59.096 41.667 18.65 0.00 34.99 1.40
56 57 5.011533 TGCAAGGGAGCTCTCTAGATAAATC 59.988 44.000 18.65 0.83 34.99 2.17
57 58 5.708948 CAAGGGAGCTCTCTAGATAAATCG 58.291 45.833 18.65 0.00 0.00 3.34
58 59 3.761752 AGGGAGCTCTCTAGATAAATCGC 59.238 47.826 16.53 0.00 0.00 4.58
59 60 3.119280 GGGAGCTCTCTAGATAAATCGCC 60.119 52.174 14.64 0.00 0.00 5.54
60 61 3.761752 GGAGCTCTCTAGATAAATCGCCT 59.238 47.826 14.64 0.00 0.00 5.52
61 62 4.219725 GGAGCTCTCTAGATAAATCGCCTT 59.780 45.833 14.64 0.00 0.00 4.35
62 63 5.416326 GGAGCTCTCTAGATAAATCGCCTTA 59.584 44.000 14.64 0.00 0.00 2.69
63 64 6.096282 GGAGCTCTCTAGATAAATCGCCTTAT 59.904 42.308 14.64 0.00 0.00 1.73
64 65 6.862209 AGCTCTCTAGATAAATCGCCTTATG 58.138 40.000 0.00 0.00 0.00 1.90
65 66 6.039616 GCTCTCTAGATAAATCGCCTTATGG 58.960 44.000 0.00 0.00 0.00 2.74
66 67 6.350612 GCTCTCTAGATAAATCGCCTTATGGT 60.351 42.308 0.00 0.00 35.27 3.55
67 68 7.159322 TCTCTAGATAAATCGCCTTATGGTC 57.841 40.000 0.00 0.00 35.27 4.02
68 69 6.719829 TCTCTAGATAAATCGCCTTATGGTCA 59.280 38.462 0.00 0.00 35.27 4.02
69 70 7.397476 TCTCTAGATAAATCGCCTTATGGTCAT 59.603 37.037 0.00 0.00 35.27 3.06
70 71 7.548097 TCTAGATAAATCGCCTTATGGTCATC 58.452 38.462 0.00 0.00 35.27 2.92
71 72 6.365970 AGATAAATCGCCTTATGGTCATCT 57.634 37.500 0.00 0.00 35.27 2.90
72 73 6.402222 AGATAAATCGCCTTATGGTCATCTC 58.598 40.000 0.00 0.00 35.27 2.75
73 74 4.422073 AAATCGCCTTATGGTCATCTCA 57.578 40.909 0.00 0.00 35.27 3.27
74 75 4.630644 AATCGCCTTATGGTCATCTCAT 57.369 40.909 0.00 0.00 35.27 2.90
75 76 3.391506 TCGCCTTATGGTCATCTCATG 57.608 47.619 0.00 0.00 35.27 3.07
76 77 2.700371 TCGCCTTATGGTCATCTCATGT 59.300 45.455 0.00 0.00 35.27 3.21
77 78 3.062763 CGCCTTATGGTCATCTCATGTC 58.937 50.000 0.00 0.00 35.27 3.06
78 79 3.244009 CGCCTTATGGTCATCTCATGTCT 60.244 47.826 0.00 0.00 35.27 3.41
79 80 4.063689 GCCTTATGGTCATCTCATGTCTG 58.936 47.826 0.00 0.00 35.27 3.51
80 81 4.202295 GCCTTATGGTCATCTCATGTCTGA 60.202 45.833 0.00 0.00 35.27 3.27
81 82 6.025789 GCCTTATGGTCATCTCATGTCTGAG 61.026 48.000 0.00 0.00 41.94 3.35
93 94 4.769688 TCATGTCTGAGATTAAATGCCGT 58.230 39.130 0.00 0.00 0.00 5.68
94 95 4.811024 TCATGTCTGAGATTAAATGCCGTC 59.189 41.667 0.00 0.00 0.00 4.79
95 96 4.471904 TGTCTGAGATTAAATGCCGTCT 57.528 40.909 0.00 0.00 0.00 4.18
96 97 5.592104 TGTCTGAGATTAAATGCCGTCTA 57.408 39.130 0.00 0.00 0.00 2.59
97 98 5.592054 TGTCTGAGATTAAATGCCGTCTAG 58.408 41.667 0.00 0.00 0.00 2.43
98 99 5.359860 TGTCTGAGATTAAATGCCGTCTAGA 59.640 40.000 0.00 0.00 0.00 2.43
99 100 6.127451 TGTCTGAGATTAAATGCCGTCTAGAA 60.127 38.462 0.00 0.00 0.00 2.10
100 101 6.199342 GTCTGAGATTAAATGCCGTCTAGAAC 59.801 42.308 0.00 0.00 0.00 3.01
101 102 6.096987 TCTGAGATTAAATGCCGTCTAGAACT 59.903 38.462 0.00 0.00 0.00 3.01
102 103 6.042777 TGAGATTAAATGCCGTCTAGAACTG 58.957 40.000 0.00 0.00 0.00 3.16
103 104 5.978814 AGATTAAATGCCGTCTAGAACTGT 58.021 37.500 0.00 0.00 0.00 3.55
104 105 7.108841 AGATTAAATGCCGTCTAGAACTGTA 57.891 36.000 0.00 0.00 0.00 2.74
105 106 7.727181 AGATTAAATGCCGTCTAGAACTGTAT 58.273 34.615 0.00 0.00 0.00 2.29
106 107 7.653713 AGATTAAATGCCGTCTAGAACTGTATG 59.346 37.037 0.00 0.00 0.00 2.39
107 108 3.735237 ATGCCGTCTAGAACTGTATGG 57.265 47.619 0.00 0.00 0.00 2.74
108 109 1.754803 TGCCGTCTAGAACTGTATGGG 59.245 52.381 0.00 0.00 0.00 4.00
109 110 1.538419 GCCGTCTAGAACTGTATGGGC 60.538 57.143 0.00 0.00 0.00 5.36
110 111 2.032620 CCGTCTAGAACTGTATGGGCT 58.967 52.381 0.00 0.00 0.00 5.19
111 112 2.431057 CCGTCTAGAACTGTATGGGCTT 59.569 50.000 0.00 0.00 0.00 4.35
112 113 3.118738 CCGTCTAGAACTGTATGGGCTTT 60.119 47.826 0.00 0.00 0.00 3.51
113 114 4.113354 CGTCTAGAACTGTATGGGCTTTC 58.887 47.826 0.00 0.00 0.00 2.62
114 115 4.381612 CGTCTAGAACTGTATGGGCTTTCA 60.382 45.833 0.00 0.00 0.00 2.69
115 116 4.870991 GTCTAGAACTGTATGGGCTTTCAC 59.129 45.833 0.00 0.00 0.00 3.18
116 117 4.777896 TCTAGAACTGTATGGGCTTTCACT 59.222 41.667 0.00 0.00 0.00 3.41
117 118 5.955959 TCTAGAACTGTATGGGCTTTCACTA 59.044 40.000 0.00 0.00 0.00 2.74
118 119 5.700402 AGAACTGTATGGGCTTTCACTAT 57.300 39.130 0.00 0.00 0.00 2.12
119 120 5.431765 AGAACTGTATGGGCTTTCACTATG 58.568 41.667 0.00 0.00 0.00 2.23
120 121 4.844349 ACTGTATGGGCTTTCACTATGT 57.156 40.909 0.00 0.00 0.00 2.29
121 122 5.950544 ACTGTATGGGCTTTCACTATGTA 57.049 39.130 0.00 0.00 0.00 2.29
122 123 6.308015 ACTGTATGGGCTTTCACTATGTAA 57.692 37.500 0.00 0.00 0.00 2.41
123 124 6.349300 ACTGTATGGGCTTTCACTATGTAAG 58.651 40.000 0.00 0.00 0.00 2.34
124 125 6.156256 ACTGTATGGGCTTTCACTATGTAAGA 59.844 38.462 0.00 0.00 27.74 2.10
125 126 7.136822 TGTATGGGCTTTCACTATGTAAGAT 57.863 36.000 0.00 0.00 27.74 2.40
126 127 7.573710 TGTATGGGCTTTCACTATGTAAGATT 58.426 34.615 0.00 0.00 27.74 2.40
127 128 8.710239 TGTATGGGCTTTCACTATGTAAGATTA 58.290 33.333 0.00 0.00 27.74 1.75
128 129 9.555727 GTATGGGCTTTCACTATGTAAGATTAA 57.444 33.333 0.00 0.00 27.74 1.40
129 130 7.859325 TGGGCTTTCACTATGTAAGATTAAC 57.141 36.000 0.00 0.00 27.74 2.01
130 131 6.826741 TGGGCTTTCACTATGTAAGATTAACC 59.173 38.462 0.00 0.00 27.74 2.85
131 132 6.018180 GGGCTTTCACTATGTAAGATTAACCG 60.018 42.308 0.00 0.00 27.74 4.44
132 133 6.537660 GGCTTTCACTATGTAAGATTAACCGT 59.462 38.462 0.00 0.00 27.74 4.83
133 134 7.399523 GCTTTCACTATGTAAGATTAACCGTG 58.600 38.462 0.00 0.00 27.74 4.94
134 135 7.277098 GCTTTCACTATGTAAGATTAACCGTGA 59.723 37.037 0.00 0.00 27.74 4.35
135 136 9.146984 CTTTCACTATGTAAGATTAACCGTGAA 57.853 33.333 0.00 0.00 37.16 3.18
136 137 8.470040 TTCACTATGTAAGATTAACCGTGAAC 57.530 34.615 0.00 0.00 34.93 3.18
137 138 7.604549 TCACTATGTAAGATTAACCGTGAACA 58.395 34.615 0.00 0.00 0.00 3.18
138 139 7.758076 TCACTATGTAAGATTAACCGTGAACAG 59.242 37.037 0.00 0.00 0.00 3.16
139 140 7.758076 CACTATGTAAGATTAACCGTGAACAGA 59.242 37.037 0.00 0.00 0.00 3.41
140 141 8.308931 ACTATGTAAGATTAACCGTGAACAGAA 58.691 33.333 0.00 0.00 0.00 3.02
141 142 9.314321 CTATGTAAGATTAACCGTGAACAGAAT 57.686 33.333 0.00 0.00 0.00 2.40
143 144 8.697846 TGTAAGATTAACCGTGAACAGAATAG 57.302 34.615 0.00 0.00 0.00 1.73
144 145 7.762615 TGTAAGATTAACCGTGAACAGAATAGG 59.237 37.037 0.00 0.00 0.00 2.57
145 146 5.671493 AGATTAACCGTGAACAGAATAGGG 58.329 41.667 0.00 0.00 0.00 3.53
146 147 2.781681 AACCGTGAACAGAATAGGGG 57.218 50.000 0.00 0.00 0.00 4.79
147 148 1.652947 ACCGTGAACAGAATAGGGGT 58.347 50.000 0.00 0.00 0.00 4.95
148 149 1.982958 ACCGTGAACAGAATAGGGGTT 59.017 47.619 0.00 0.00 0.00 4.11
149 150 2.290071 ACCGTGAACAGAATAGGGGTTG 60.290 50.000 0.00 0.00 0.00 3.77
150 151 1.737793 CGTGAACAGAATAGGGGTTGC 59.262 52.381 0.00 0.00 0.00 4.17
151 152 2.092323 GTGAACAGAATAGGGGTTGCC 58.908 52.381 0.00 0.00 0.00 4.52
152 153 1.339631 TGAACAGAATAGGGGTTGCCG 60.340 52.381 0.00 0.00 0.00 5.69
153 154 0.988832 AACAGAATAGGGGTTGCCGA 59.011 50.000 0.00 0.00 0.00 5.54
154 155 0.541863 ACAGAATAGGGGTTGCCGAG 59.458 55.000 0.00 0.00 0.00 4.63
155 156 0.541863 CAGAATAGGGGTTGCCGAGT 59.458 55.000 0.00 0.00 0.00 4.18
156 157 0.541863 AGAATAGGGGTTGCCGAGTG 59.458 55.000 0.00 0.00 0.00 3.51
157 158 0.252197 GAATAGGGGTTGCCGAGTGT 59.748 55.000 0.00 0.00 0.00 3.55
158 159 0.252197 AATAGGGGTTGCCGAGTGTC 59.748 55.000 0.00 0.00 0.00 3.67
159 160 0.617820 ATAGGGGTTGCCGAGTGTCT 60.618 55.000 0.00 0.00 0.00 3.41
160 161 1.541310 TAGGGGTTGCCGAGTGTCTG 61.541 60.000 0.00 0.00 0.00 3.51
161 162 2.741092 GGGTTGCCGAGTGTCTGA 59.259 61.111 0.00 0.00 0.00 3.27
162 163 1.668151 GGGTTGCCGAGTGTCTGAC 60.668 63.158 0.00 0.00 0.00 3.51
163 164 1.367840 GGTTGCCGAGTGTCTGACT 59.632 57.895 9.51 0.00 37.76 3.41
164 165 0.601558 GGTTGCCGAGTGTCTGACTA 59.398 55.000 9.51 0.00 33.83 2.59
165 166 1.204941 GGTTGCCGAGTGTCTGACTAT 59.795 52.381 9.51 0.00 33.83 2.12
166 167 2.531206 GTTGCCGAGTGTCTGACTATC 58.469 52.381 9.51 6.12 33.83 2.08
167 168 1.103803 TGCCGAGTGTCTGACTATCC 58.896 55.000 9.51 0.00 33.83 2.59
168 169 1.103803 GCCGAGTGTCTGACTATCCA 58.896 55.000 9.51 0.00 33.83 3.41
169 170 1.683917 GCCGAGTGTCTGACTATCCAT 59.316 52.381 9.51 0.00 33.83 3.41
170 171 2.544694 GCCGAGTGTCTGACTATCCATG 60.545 54.545 9.51 0.00 33.83 3.66
171 172 2.035193 CCGAGTGTCTGACTATCCATGG 59.965 54.545 4.97 4.97 33.83 3.66
172 173 2.952310 CGAGTGTCTGACTATCCATGGA 59.048 50.000 18.88 18.88 33.83 3.41
173 174 3.381590 CGAGTGTCTGACTATCCATGGAA 59.618 47.826 20.67 7.48 33.83 3.53
174 175 4.498850 CGAGTGTCTGACTATCCATGGAAG 60.499 50.000 20.67 18.59 33.83 3.46
175 176 4.614475 AGTGTCTGACTATCCATGGAAGA 58.386 43.478 20.67 13.84 30.86 2.87
176 177 5.026121 AGTGTCTGACTATCCATGGAAGAA 58.974 41.667 20.67 6.58 30.86 2.52
177 178 5.105146 AGTGTCTGACTATCCATGGAAGAAC 60.105 44.000 20.67 15.36 30.86 3.01
178 179 4.142160 TGTCTGACTATCCATGGAAGAACG 60.142 45.833 20.67 7.95 0.00 3.95
179 180 3.384789 TCTGACTATCCATGGAAGAACGG 59.615 47.826 20.67 15.23 0.00 4.44
180 181 3.371034 TGACTATCCATGGAAGAACGGA 58.629 45.455 20.67 0.00 0.00 4.69
181 182 3.384789 TGACTATCCATGGAAGAACGGAG 59.615 47.826 20.67 9.70 0.00 4.63
182 183 2.700897 ACTATCCATGGAAGAACGGAGG 59.299 50.000 20.67 3.94 0.00 4.30
183 184 1.584724 ATCCATGGAAGAACGGAGGT 58.415 50.000 20.67 0.00 0.00 3.85
184 185 1.358152 TCCATGGAAGAACGGAGGTT 58.642 50.000 13.46 0.00 39.63 3.50
185 186 2.542550 TCCATGGAAGAACGGAGGTTA 58.457 47.619 13.46 0.00 36.24 2.85
186 187 2.500098 TCCATGGAAGAACGGAGGTTAG 59.500 50.000 13.46 0.00 36.24 2.34
187 188 2.420129 CCATGGAAGAACGGAGGTTAGG 60.420 54.545 5.56 0.00 36.24 2.69
188 189 2.314071 TGGAAGAACGGAGGTTAGGA 57.686 50.000 0.00 0.00 36.24 2.94
189 190 2.829023 TGGAAGAACGGAGGTTAGGAT 58.171 47.619 0.00 0.00 36.24 3.24
190 191 3.985127 TGGAAGAACGGAGGTTAGGATA 58.015 45.455 0.00 0.00 36.24 2.59
191 192 3.958798 TGGAAGAACGGAGGTTAGGATAG 59.041 47.826 0.00 0.00 36.24 2.08
192 193 3.243805 GGAAGAACGGAGGTTAGGATAGC 60.244 52.174 0.00 0.00 36.24 2.97
193 194 3.315880 AGAACGGAGGTTAGGATAGCT 57.684 47.619 0.00 0.00 36.24 3.32
194 195 3.644335 AGAACGGAGGTTAGGATAGCTT 58.356 45.455 0.00 0.00 36.24 3.74
195 196 3.385111 AGAACGGAGGTTAGGATAGCTTG 59.615 47.826 0.00 0.00 36.24 4.01
196 197 2.748388 ACGGAGGTTAGGATAGCTTGT 58.252 47.619 0.00 0.00 0.00 3.16
197 198 3.105283 ACGGAGGTTAGGATAGCTTGTT 58.895 45.455 0.00 0.00 0.00 2.83
198 199 3.118738 ACGGAGGTTAGGATAGCTTGTTG 60.119 47.826 0.00 0.00 0.00 3.33
199 200 3.741388 CGGAGGTTAGGATAGCTTGTTGG 60.741 52.174 0.00 0.00 0.00 3.77
200 201 3.206964 GAGGTTAGGATAGCTTGTTGGC 58.793 50.000 0.00 0.00 0.00 4.52
201 202 2.846827 AGGTTAGGATAGCTTGTTGGCT 59.153 45.455 0.00 0.00 45.29 4.75
202 203 4.037927 AGGTTAGGATAGCTTGTTGGCTA 58.962 43.478 0.00 0.00 46.82 3.93
203 204 4.473559 AGGTTAGGATAGCTTGTTGGCTAA 59.526 41.667 0.00 0.00 46.06 3.09
204 205 4.816925 GGTTAGGATAGCTTGTTGGCTAAG 59.183 45.833 0.00 0.00 46.06 2.18
219 220 3.722728 GCTAAGCCAAAATCCTCCATG 57.277 47.619 0.00 0.00 0.00 3.66
220 221 3.026694 GCTAAGCCAAAATCCTCCATGT 58.973 45.455 0.00 0.00 0.00 3.21
221 222 4.207165 GCTAAGCCAAAATCCTCCATGTA 58.793 43.478 0.00 0.00 0.00 2.29
222 223 4.829492 GCTAAGCCAAAATCCTCCATGTAT 59.171 41.667 0.00 0.00 0.00 2.29
223 224 5.048434 GCTAAGCCAAAATCCTCCATGTATC 60.048 44.000 0.00 0.00 0.00 2.24
224 225 3.480470 AGCCAAAATCCTCCATGTATCG 58.520 45.455 0.00 0.00 0.00 2.92
225 226 3.136443 AGCCAAAATCCTCCATGTATCGA 59.864 43.478 0.00 0.00 0.00 3.59
226 227 3.499918 GCCAAAATCCTCCATGTATCGAG 59.500 47.826 0.00 0.00 0.00 4.04
227 228 3.499918 CCAAAATCCTCCATGTATCGAGC 59.500 47.826 0.00 0.00 0.00 5.03
228 229 4.384056 CAAAATCCTCCATGTATCGAGCT 58.616 43.478 0.00 0.00 0.00 4.09
229 230 3.674528 AATCCTCCATGTATCGAGCTG 57.325 47.619 0.00 0.00 0.00 4.24
230 231 0.676184 TCCTCCATGTATCGAGCTGC 59.324 55.000 0.00 0.00 0.00 5.25
231 232 0.678395 CCTCCATGTATCGAGCTGCT 59.322 55.000 0.00 0.00 0.00 4.24
232 233 1.069823 CCTCCATGTATCGAGCTGCTT 59.930 52.381 2.53 0.00 0.00 3.91
233 234 2.133553 CTCCATGTATCGAGCTGCTTG 58.866 52.381 10.76 10.76 0.00 4.01
234 235 1.482182 TCCATGTATCGAGCTGCTTGT 59.518 47.619 16.18 6.95 0.00 3.16
235 236 2.093500 TCCATGTATCGAGCTGCTTGTT 60.093 45.455 16.18 10.82 0.00 2.83
236 237 2.679837 CCATGTATCGAGCTGCTTGTTT 59.320 45.455 16.18 8.26 0.00 2.83
237 238 3.127548 CCATGTATCGAGCTGCTTGTTTT 59.872 43.478 16.18 6.01 0.00 2.43
238 239 4.379813 CCATGTATCGAGCTGCTTGTTTTT 60.380 41.667 16.18 3.79 0.00 1.94
261 262 6.785488 TTTTAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
262 263 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
263 264 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
264 265 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
265 266 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
266 267 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
267 268 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
268 269 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
269 270 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
270 271 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
271 272 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
272 273 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
273 274 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
274 275 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
275 276 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
279 280 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
280 281 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
281 282 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
282 283 2.185262 CGCTCATATACACGCGCATAT 58.815 47.619 5.73 7.02 39.11 1.78
283 284 3.359654 CGCTCATATACACGCGCATATA 58.640 45.455 5.73 9.29 39.11 0.86
284 285 3.177838 CGCTCATATACACGCGCATATAC 59.822 47.826 5.73 0.29 39.11 1.47
285 286 4.352039 GCTCATATACACGCGCATATACT 58.648 43.478 5.73 0.00 0.00 2.12
286 287 4.438145 GCTCATATACACGCGCATATACTC 59.562 45.833 5.73 0.00 0.00 2.59
287 288 5.554822 TCATATACACGCGCATATACTCA 57.445 39.130 5.73 0.00 0.00 3.41
288 289 5.329493 TCATATACACGCGCATATACTCAC 58.671 41.667 5.73 0.00 0.00 3.51
289 290 2.410785 TACACGCGCATATACTCACC 57.589 50.000 5.73 0.00 0.00 4.02
290 291 0.249322 ACACGCGCATATACTCACCC 60.249 55.000 5.73 0.00 0.00 4.61
291 292 0.944311 CACGCGCATATACTCACCCC 60.944 60.000 5.73 0.00 0.00 4.95
292 293 1.113517 ACGCGCATATACTCACCCCT 61.114 55.000 5.73 0.00 0.00 4.79
293 294 0.885879 CGCGCATATACTCACCCCTA 59.114 55.000 8.75 0.00 0.00 3.53
294 295 1.476891 CGCGCATATACTCACCCCTAT 59.523 52.381 8.75 0.00 0.00 2.57
295 296 2.686405 CGCGCATATACTCACCCCTATA 59.314 50.000 8.75 0.00 0.00 1.31
296 297 3.129813 CGCGCATATACTCACCCCTATAA 59.870 47.826 8.75 0.00 0.00 0.98
297 298 4.683832 GCGCATATACTCACCCCTATAAG 58.316 47.826 0.30 0.00 0.00 1.73
298 299 4.683832 CGCATATACTCACCCCTATAAGC 58.316 47.826 0.00 0.00 0.00 3.09
299 300 4.683832 GCATATACTCACCCCTATAAGCG 58.316 47.826 0.00 0.00 0.00 4.68
300 301 4.683832 CATATACTCACCCCTATAAGCGC 58.316 47.826 0.00 0.00 0.00 5.92
301 302 2.076207 TACTCACCCCTATAAGCGCA 57.924 50.000 11.47 0.00 0.00 6.09
302 303 0.464452 ACTCACCCCTATAAGCGCAC 59.536 55.000 11.47 0.00 0.00 5.34
303 304 0.464036 CTCACCCCTATAAGCGCACA 59.536 55.000 11.47 0.00 0.00 4.57
304 305 0.177141 TCACCCCTATAAGCGCACAC 59.823 55.000 11.47 0.00 0.00 3.82
305 306 0.107897 CACCCCTATAAGCGCACACA 60.108 55.000 11.47 0.00 0.00 3.72
306 307 0.107848 ACCCCTATAAGCGCACACAC 60.108 55.000 11.47 0.00 0.00 3.82
307 308 1.151777 CCCCTATAAGCGCACACACG 61.152 60.000 11.47 0.00 0.00 4.49
316 317 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
317 318 1.671054 GCACACACGCACACCCTAT 60.671 57.895 0.00 0.00 0.00 2.57
318 319 1.635663 GCACACACGCACACCCTATC 61.636 60.000 0.00 0.00 0.00 2.08
319 320 1.019278 CACACACGCACACCCTATCC 61.019 60.000 0.00 0.00 0.00 2.59
320 321 1.449601 CACACGCACACCCTATCCC 60.450 63.158 0.00 0.00 0.00 3.85
321 322 1.612442 ACACGCACACCCTATCCCT 60.612 57.895 0.00 0.00 0.00 4.20
322 323 0.324923 ACACGCACACCCTATCCCTA 60.325 55.000 0.00 0.00 0.00 3.53
323 324 1.048601 CACGCACACCCTATCCCTAT 58.951 55.000 0.00 0.00 0.00 2.57
324 325 1.048601 ACGCACACCCTATCCCTATG 58.951 55.000 0.00 0.00 0.00 2.23
325 326 1.338107 CGCACACCCTATCCCTATGA 58.662 55.000 0.00 0.00 0.00 2.15
326 327 1.273606 CGCACACCCTATCCCTATGAG 59.726 57.143 0.00 0.00 0.00 2.90
327 328 1.002544 GCACACCCTATCCCTATGAGC 59.997 57.143 0.00 0.00 0.00 4.26
328 329 2.329267 CACACCCTATCCCTATGAGCA 58.671 52.381 0.00 0.00 0.00 4.26
329 330 2.909006 CACACCCTATCCCTATGAGCAT 59.091 50.000 0.00 0.00 0.00 3.79
330 331 3.328931 CACACCCTATCCCTATGAGCATT 59.671 47.826 0.00 0.00 0.00 3.56
331 332 3.983410 ACACCCTATCCCTATGAGCATTT 59.017 43.478 0.00 0.00 0.00 2.32
332 333 4.042187 ACACCCTATCCCTATGAGCATTTC 59.958 45.833 0.00 0.00 0.00 2.17
333 334 3.589288 ACCCTATCCCTATGAGCATTTCC 59.411 47.826 0.00 0.00 0.00 3.13
334 335 3.369892 CCCTATCCCTATGAGCATTTCCG 60.370 52.174 0.00 0.00 0.00 4.30
335 336 3.515502 CCTATCCCTATGAGCATTTCCGA 59.484 47.826 0.00 0.00 0.00 4.55
336 337 4.020218 CCTATCCCTATGAGCATTTCCGAA 60.020 45.833 0.00 0.00 0.00 4.30
337 338 3.924114 TCCCTATGAGCATTTCCGAAA 57.076 42.857 0.00 0.00 0.00 3.46
338 339 3.808728 TCCCTATGAGCATTTCCGAAAG 58.191 45.455 0.00 0.00 0.00 2.62
339 340 3.454447 TCCCTATGAGCATTTCCGAAAGA 59.546 43.478 0.00 0.00 0.00 2.52
340 341 3.561725 CCCTATGAGCATTTCCGAAAGAC 59.438 47.826 0.00 0.00 0.00 3.01
341 342 4.446371 CCTATGAGCATTTCCGAAAGACT 58.554 43.478 0.00 0.00 0.00 3.24
342 343 4.272018 CCTATGAGCATTTCCGAAAGACTG 59.728 45.833 0.00 0.00 0.00 3.51
343 344 3.401033 TGAGCATTTCCGAAAGACTGA 57.599 42.857 0.00 0.00 0.00 3.41
344 345 3.329386 TGAGCATTTCCGAAAGACTGAG 58.671 45.455 0.00 0.00 0.00 3.35
345 346 2.079925 AGCATTTCCGAAAGACTGAGC 58.920 47.619 0.00 0.00 0.00 4.26
346 347 1.131315 GCATTTCCGAAAGACTGAGCC 59.869 52.381 0.00 0.00 0.00 4.70
347 348 1.394917 CATTTCCGAAAGACTGAGCCG 59.605 52.381 0.00 0.00 0.00 5.52
348 349 0.320421 TTTCCGAAAGACTGAGCCGG 60.320 55.000 0.00 0.00 41.36 6.13
349 350 2.781595 TTCCGAAAGACTGAGCCGGC 62.782 60.000 21.89 21.89 39.96 6.13
350 351 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
351 352 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
352 353 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
353 354 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
354 355 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
355 356 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
356 357 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
357 358 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
358 359 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
359 360 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
360 361 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
361 362 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
362 363 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
363 364 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
364 365 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
365 366 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
366 367 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
367 368 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
368 369 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
369 370 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
370 371 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
371 372 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
372 373 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
373 374 7.232994 GCATATCATCTTGAGATTTACGAAGC 58.767 38.462 0.00 0.00 31.21 3.86
374 375 7.095481 GCATATCATCTTGAGATTTACGAAGCA 60.095 37.037 0.00 0.00 31.21 3.91
375 376 8.768019 CATATCATCTTGAGATTTACGAAGCAA 58.232 33.333 0.00 0.00 31.21 3.91
376 377 6.408858 TCATCTTGAGATTTACGAAGCAAC 57.591 37.500 0.00 0.00 31.21 4.17
377 378 5.351465 TCATCTTGAGATTTACGAAGCAACC 59.649 40.000 0.00 0.00 31.21 3.77
378 379 3.678072 TCTTGAGATTTACGAAGCAACCG 59.322 43.478 0.00 0.00 0.00 4.44
379 380 3.034721 TGAGATTTACGAAGCAACCGT 57.965 42.857 0.00 0.00 43.26 4.83
380 381 4.177165 TGAGATTTACGAAGCAACCGTA 57.823 40.909 0.00 0.00 40.95 4.02
381 382 4.171005 TGAGATTTACGAAGCAACCGTAG 58.829 43.478 0.00 0.00 42.42 3.51
394 395 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
395 396 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
416 417 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
417 418 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
418 419 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
419 420 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
420 421 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
421 422 1.645710 ACGTCTCCTCCCACTGAAAT 58.354 50.000 0.00 0.00 0.00 2.17
422 423 1.550976 ACGTCTCCTCCCACTGAAATC 59.449 52.381 0.00 0.00 0.00 2.17
423 424 1.469940 CGTCTCCTCCCACTGAAATCG 60.470 57.143 0.00 0.00 0.00 3.34
424 425 0.537188 TCTCCTCCCACTGAAATCGC 59.463 55.000 0.00 0.00 0.00 4.58
425 426 0.250234 CTCCTCCCACTGAAATCGCA 59.750 55.000 0.00 0.00 0.00 5.10
426 427 0.911769 TCCTCCCACTGAAATCGCAT 59.088 50.000 0.00 0.00 0.00 4.73
427 428 1.134401 TCCTCCCACTGAAATCGCATC 60.134 52.381 0.00 0.00 0.00 3.91
428 429 0.933097 CTCCCACTGAAATCGCATCG 59.067 55.000 0.00 0.00 0.00 3.84
429 430 1.089481 TCCCACTGAAATCGCATCGC 61.089 55.000 0.00 0.00 0.00 4.58
430 431 1.353103 CCACTGAAATCGCATCGCC 59.647 57.895 0.00 0.00 0.00 5.54
431 432 1.011904 CACTGAAATCGCATCGCCG 60.012 57.895 0.00 0.00 0.00 6.46
432 433 2.173669 ACTGAAATCGCATCGCCGG 61.174 57.895 0.00 0.00 0.00 6.13
433 434 1.882625 CTGAAATCGCATCGCCGGA 60.883 57.895 5.05 0.00 0.00 5.14
434 435 1.428370 CTGAAATCGCATCGCCGGAA 61.428 55.000 5.05 0.00 0.00 4.30
435 436 1.021920 TGAAATCGCATCGCCGGAAA 61.022 50.000 5.05 0.00 0.00 3.13
436 437 0.307760 GAAATCGCATCGCCGGAAAT 59.692 50.000 5.05 0.00 0.00 2.17
437 438 0.307760 AAATCGCATCGCCGGAAATC 59.692 50.000 5.05 0.00 0.00 2.17
438 439 1.507141 AATCGCATCGCCGGAAATCC 61.507 55.000 5.05 0.00 0.00 3.01
439 440 2.383245 ATCGCATCGCCGGAAATCCT 62.383 55.000 5.05 0.00 0.00 3.24
440 441 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
441 442 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
442 443 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
443 444 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
444 445 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
445 446 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
446 447 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
447 448 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
448 449 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
449 450 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
450 451 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
451 452 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
452 453 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
453 454 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
463 464 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
464 465 8.231692 TGAAATAAATCCAGGAATAATGCGAA 57.768 30.769 0.00 0.00 0.00 4.70
465 466 8.859090 TGAAATAAATCCAGGAATAATGCGAAT 58.141 29.630 0.00 0.00 0.00 3.34
466 467 9.346725 GAAATAAATCCAGGAATAATGCGAATC 57.653 33.333 0.00 0.00 0.00 2.52
467 468 5.362556 AAATCCAGGAATAATGCGAATCG 57.637 39.130 0.00 0.00 0.00 3.34
468 469 3.744238 TCCAGGAATAATGCGAATCGA 57.256 42.857 6.91 0.00 0.00 3.59
469 470 4.066646 TCCAGGAATAATGCGAATCGAA 57.933 40.909 6.91 0.00 0.00 3.71
470 471 3.807622 TCCAGGAATAATGCGAATCGAAC 59.192 43.478 6.91 0.00 0.00 3.95
471 472 3.809832 CCAGGAATAATGCGAATCGAACT 59.190 43.478 6.91 0.00 0.00 3.01
740 756 1.227664 CCCTCTCCTCGACAGCCTA 59.772 63.158 0.00 0.00 0.00 3.93
877 893 0.995024 CTTCTCCTCCACCAACCCAT 59.005 55.000 0.00 0.00 0.00 4.00
904 920 4.379243 CACGAGCTCCACCCGCTT 62.379 66.667 8.47 0.00 37.96 4.68
1086 1102 2.289631 CCACTACCATGAGCTTGACACA 60.290 50.000 0.00 0.00 0.00 3.72
1302 1318 1.536922 CGTATGAAGCTCATCACCGCT 60.537 52.381 2.47 0.00 38.26 5.52
1391 1408 2.434185 GCGCTTCGACACCATCCA 60.434 61.111 0.00 0.00 0.00 3.41
1410 1427 1.065410 ATGTGGTTCTGGGGGACACA 61.065 55.000 0.00 0.00 44.91 3.72
1454 1471 0.507358 GTCTTCTCGTGCGTCAAACC 59.493 55.000 0.00 0.00 0.00 3.27
1579 1597 4.660938 GCTTCCCCAACACCGGCT 62.661 66.667 0.00 0.00 0.00 5.52
1611 1629 3.664025 CTCCGGTGAGCGCATGGAA 62.664 63.158 11.47 1.50 32.97 3.53
1625 1643 3.467226 GGAACGGCCCTCGGATCA 61.467 66.667 0.00 0.00 44.45 2.92
1639 1657 2.535317 ATCAGGGCCCCAACCAGT 60.535 61.111 21.43 0.00 0.00 4.00
1866 1920 4.947147 GTGCTTGGGCCACGTCCA 62.947 66.667 5.23 0.00 34.47 4.02
2046 2107 1.003355 CGCCTCCAACCACATGACT 60.003 57.895 0.00 0.00 0.00 3.41
2598 2663 7.043192 CGCCTTTTGATTTAATCCATTGTGATC 60.043 37.037 2.22 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.153721 GCATTGTCAGGAATTTAATGAATTTCA 57.846 29.630 0.75 0.75 38.06 2.69
3 4 8.606602 GGCATTGTCAGGAATTTAATGAATTTC 58.393 33.333 0.00 0.00 38.06 2.17
4 5 8.102047 TGGCATTGTCAGGAATTTAATGAATTT 58.898 29.630 0.00 0.00 38.06 1.82
5 6 7.550196 GTGGCATTGTCAGGAATTTAATGAATT 59.450 33.333 0.00 0.00 40.61 2.17
6 7 7.043565 GTGGCATTGTCAGGAATTTAATGAAT 58.956 34.615 0.00 0.00 32.05 2.57
7 8 6.211184 AGTGGCATTGTCAGGAATTTAATGAA 59.789 34.615 0.00 0.00 32.05 2.57
8 9 5.716228 AGTGGCATTGTCAGGAATTTAATGA 59.284 36.000 0.00 0.00 32.05 2.57
9 10 5.808540 CAGTGGCATTGTCAGGAATTTAATG 59.191 40.000 1.24 0.00 33.18 1.90
10 11 5.625197 GCAGTGGCATTGTCAGGAATTTAAT 60.625 40.000 11.82 0.00 40.72 1.40
11 12 4.321899 GCAGTGGCATTGTCAGGAATTTAA 60.322 41.667 11.82 0.00 40.72 1.52
12 13 3.193267 GCAGTGGCATTGTCAGGAATTTA 59.807 43.478 11.82 0.00 40.72 1.40
13 14 2.028748 GCAGTGGCATTGTCAGGAATTT 60.029 45.455 11.82 0.00 40.72 1.82
14 15 1.547372 GCAGTGGCATTGTCAGGAATT 59.453 47.619 11.82 0.00 40.72 2.17
15 16 1.180029 GCAGTGGCATTGTCAGGAAT 58.820 50.000 11.82 0.00 40.72 3.01
16 17 2.644887 GCAGTGGCATTGTCAGGAA 58.355 52.632 11.82 0.00 40.72 3.36
17 18 4.402851 GCAGTGGCATTGTCAGGA 57.597 55.556 11.82 0.00 40.72 3.86
27 28 2.749441 GAGCTCCCTTGCAGTGGC 60.749 66.667 0.87 0.00 41.68 5.01
28 29 1.078567 GAGAGCTCCCTTGCAGTGG 60.079 63.158 10.93 1.28 34.99 4.00
29 30 1.136695 CTAGAGAGCTCCCTTGCAGTG 59.863 57.143 10.93 0.00 34.99 3.66
30 31 1.006519 TCTAGAGAGCTCCCTTGCAGT 59.993 52.381 10.93 0.00 34.99 4.40
31 32 1.774110 TCTAGAGAGCTCCCTTGCAG 58.226 55.000 10.93 0.00 34.99 4.41
32 33 2.468301 ATCTAGAGAGCTCCCTTGCA 57.532 50.000 10.93 0.00 34.99 4.08
33 34 4.946478 TTTATCTAGAGAGCTCCCTTGC 57.054 45.455 10.93 0.00 0.00 4.01
34 35 5.708948 CGATTTATCTAGAGAGCTCCCTTG 58.291 45.833 10.93 5.07 0.00 3.61
35 36 4.219725 GCGATTTATCTAGAGAGCTCCCTT 59.780 45.833 10.93 0.00 0.00 3.95
36 37 3.761752 GCGATTTATCTAGAGAGCTCCCT 59.238 47.826 10.93 6.53 0.00 4.20
37 38 3.119280 GGCGATTTATCTAGAGAGCTCCC 60.119 52.174 10.93 0.00 0.00 4.30
38 39 3.761752 AGGCGATTTATCTAGAGAGCTCC 59.238 47.826 10.93 1.70 0.00 4.70
39 40 5.385509 AAGGCGATTTATCTAGAGAGCTC 57.614 43.478 5.27 5.27 0.00 4.09
40 41 6.127479 CCATAAGGCGATTTATCTAGAGAGCT 60.127 42.308 0.00 0.00 0.00 4.09
41 42 6.039616 CCATAAGGCGATTTATCTAGAGAGC 58.960 44.000 0.00 0.00 0.00 4.09
42 43 7.094162 TGACCATAAGGCGATTTATCTAGAGAG 60.094 40.741 0.00 0.00 39.06 3.20
43 44 6.719829 TGACCATAAGGCGATTTATCTAGAGA 59.280 38.462 0.00 0.00 39.06 3.10
44 45 6.925211 TGACCATAAGGCGATTTATCTAGAG 58.075 40.000 0.00 0.00 39.06 2.43
45 46 6.911250 TGACCATAAGGCGATTTATCTAGA 57.089 37.500 0.00 0.00 39.06 2.43
46 47 7.551585 AGATGACCATAAGGCGATTTATCTAG 58.448 38.462 0.00 0.00 39.06 2.43
47 48 7.178451 TGAGATGACCATAAGGCGATTTATCTA 59.822 37.037 0.00 0.00 39.06 1.98
48 49 6.014242 TGAGATGACCATAAGGCGATTTATCT 60.014 38.462 0.00 0.00 39.06 1.98
49 50 6.166279 TGAGATGACCATAAGGCGATTTATC 58.834 40.000 0.00 0.00 39.06 1.75
50 51 6.114187 TGAGATGACCATAAGGCGATTTAT 57.886 37.500 0.00 0.00 39.06 1.40
51 52 5.545063 TGAGATGACCATAAGGCGATTTA 57.455 39.130 0.00 0.00 39.06 1.40
52 53 4.422073 TGAGATGACCATAAGGCGATTT 57.578 40.909 0.00 0.00 39.06 2.17
53 54 4.202398 ACATGAGATGACCATAAGGCGATT 60.202 41.667 0.00 0.00 39.06 3.34
54 55 3.326006 ACATGAGATGACCATAAGGCGAT 59.674 43.478 0.00 0.00 39.06 4.58
55 56 2.700371 ACATGAGATGACCATAAGGCGA 59.300 45.455 0.00 0.00 39.06 5.54
56 57 3.062763 GACATGAGATGACCATAAGGCG 58.937 50.000 0.00 0.00 39.06 5.52
57 58 4.063689 CAGACATGAGATGACCATAAGGC 58.936 47.826 0.00 0.00 39.06 4.35
58 59 5.541953 TCAGACATGAGATGACCATAAGG 57.458 43.478 0.00 0.00 42.21 2.69
71 72 4.769688 ACGGCATTTAATCTCAGACATGA 58.230 39.130 0.00 0.00 0.00 3.07
72 73 4.813161 AGACGGCATTTAATCTCAGACATG 59.187 41.667 0.00 0.00 0.00 3.21
73 74 5.028549 AGACGGCATTTAATCTCAGACAT 57.971 39.130 0.00 0.00 0.00 3.06
74 75 4.471904 AGACGGCATTTAATCTCAGACA 57.528 40.909 0.00 0.00 0.00 3.41
75 76 5.833082 TCTAGACGGCATTTAATCTCAGAC 58.167 41.667 0.00 0.00 0.00 3.51
76 77 6.096987 AGTTCTAGACGGCATTTAATCTCAGA 59.903 38.462 0.00 0.00 0.00 3.27
77 78 6.199908 CAGTTCTAGACGGCATTTAATCTCAG 59.800 42.308 0.00 0.00 0.00 3.35
78 79 6.042777 CAGTTCTAGACGGCATTTAATCTCA 58.957 40.000 0.00 0.00 0.00 3.27
79 80 6.043411 ACAGTTCTAGACGGCATTTAATCTC 58.957 40.000 0.00 0.00 0.00 2.75
80 81 5.978814 ACAGTTCTAGACGGCATTTAATCT 58.021 37.500 0.00 0.00 0.00 2.40
81 82 7.095607 CCATACAGTTCTAGACGGCATTTAATC 60.096 40.741 0.00 0.00 0.00 1.75
82 83 6.706270 CCATACAGTTCTAGACGGCATTTAAT 59.294 38.462 0.00 0.00 0.00 1.40
83 84 6.046593 CCATACAGTTCTAGACGGCATTTAA 58.953 40.000 0.00 0.00 0.00 1.52
84 85 5.452776 CCCATACAGTTCTAGACGGCATTTA 60.453 44.000 0.00 0.00 0.00 1.40
85 86 4.442706 CCATACAGTTCTAGACGGCATTT 58.557 43.478 0.00 0.00 0.00 2.32
86 87 3.181465 CCCATACAGTTCTAGACGGCATT 60.181 47.826 0.00 0.00 0.00 3.56
87 88 2.365617 CCCATACAGTTCTAGACGGCAT 59.634 50.000 0.00 0.00 0.00 4.40
88 89 1.754803 CCCATACAGTTCTAGACGGCA 59.245 52.381 0.00 0.00 0.00 5.69
89 90 1.538419 GCCCATACAGTTCTAGACGGC 60.538 57.143 0.00 0.00 0.00 5.68
90 91 2.032620 AGCCCATACAGTTCTAGACGG 58.967 52.381 0.00 0.00 0.00 4.79
91 92 3.802948 AAGCCCATACAGTTCTAGACG 57.197 47.619 0.00 0.00 0.00 4.18
92 93 4.870991 GTGAAAGCCCATACAGTTCTAGAC 59.129 45.833 0.00 0.00 0.00 2.59
93 94 4.777896 AGTGAAAGCCCATACAGTTCTAGA 59.222 41.667 0.00 0.00 0.00 2.43
94 95 5.091261 AGTGAAAGCCCATACAGTTCTAG 57.909 43.478 0.00 0.00 0.00 2.43
95 96 6.156256 ACATAGTGAAAGCCCATACAGTTCTA 59.844 38.462 0.00 0.00 0.00 2.10
96 97 5.045578 ACATAGTGAAAGCCCATACAGTTCT 60.046 40.000 0.00 0.00 0.00 3.01
97 98 5.186198 ACATAGTGAAAGCCCATACAGTTC 58.814 41.667 0.00 0.00 0.00 3.01
98 99 5.179452 ACATAGTGAAAGCCCATACAGTT 57.821 39.130 0.00 0.00 0.00 3.16
99 100 4.844349 ACATAGTGAAAGCCCATACAGT 57.156 40.909 0.00 0.00 0.00 3.55
100 101 6.582636 TCTTACATAGTGAAAGCCCATACAG 58.417 40.000 0.00 0.00 0.00 2.74
101 102 6.553953 TCTTACATAGTGAAAGCCCATACA 57.446 37.500 0.00 0.00 0.00 2.29
102 103 9.555727 TTAATCTTACATAGTGAAAGCCCATAC 57.444 33.333 0.00 0.00 0.00 2.39
103 104 9.555727 GTTAATCTTACATAGTGAAAGCCCATA 57.444 33.333 0.00 0.00 0.00 2.74
104 105 7.502561 GGTTAATCTTACATAGTGAAAGCCCAT 59.497 37.037 0.00 0.00 0.00 4.00
105 106 6.826741 GGTTAATCTTACATAGTGAAAGCCCA 59.173 38.462 0.00 0.00 0.00 5.36
106 107 6.018180 CGGTTAATCTTACATAGTGAAAGCCC 60.018 42.308 0.00 0.00 0.00 5.19
107 108 6.537660 ACGGTTAATCTTACATAGTGAAAGCC 59.462 38.462 0.00 0.00 0.00 4.35
108 109 7.277098 TCACGGTTAATCTTACATAGTGAAAGC 59.723 37.037 0.00 0.00 33.85 3.51
109 110 8.697846 TCACGGTTAATCTTACATAGTGAAAG 57.302 34.615 0.00 0.00 33.85 2.62
110 111 8.928733 GTTCACGGTTAATCTTACATAGTGAAA 58.071 33.333 8.47 0.00 44.24 2.69
111 112 8.089597 TGTTCACGGTTAATCTTACATAGTGAA 58.910 33.333 3.48 3.48 41.74 3.18
112 113 7.604549 TGTTCACGGTTAATCTTACATAGTGA 58.395 34.615 0.00 0.00 34.78 3.41
113 114 7.758076 TCTGTTCACGGTTAATCTTACATAGTG 59.242 37.037 0.00 0.00 0.00 2.74
114 115 7.833786 TCTGTTCACGGTTAATCTTACATAGT 58.166 34.615 0.00 0.00 0.00 2.12
115 116 8.697846 TTCTGTTCACGGTTAATCTTACATAG 57.302 34.615 0.00 0.00 0.00 2.23
117 118 9.314321 CTATTCTGTTCACGGTTAATCTTACAT 57.686 33.333 0.00 0.00 0.00 2.29
118 119 7.762615 CCTATTCTGTTCACGGTTAATCTTACA 59.237 37.037 0.00 0.00 0.00 2.41
119 120 7.224167 CCCTATTCTGTTCACGGTTAATCTTAC 59.776 40.741 0.00 0.00 0.00 2.34
120 121 7.270047 CCCTATTCTGTTCACGGTTAATCTTA 58.730 38.462 0.00 0.00 0.00 2.10
121 122 6.113411 CCCTATTCTGTTCACGGTTAATCTT 58.887 40.000 0.00 0.00 0.00 2.40
122 123 5.396436 CCCCTATTCTGTTCACGGTTAATCT 60.396 44.000 0.00 0.00 0.00 2.40
123 124 4.814771 CCCCTATTCTGTTCACGGTTAATC 59.185 45.833 0.00 0.00 0.00 1.75
124 125 4.226620 ACCCCTATTCTGTTCACGGTTAAT 59.773 41.667 0.00 0.00 0.00 1.40
125 126 3.583966 ACCCCTATTCTGTTCACGGTTAA 59.416 43.478 0.00 0.00 0.00 2.01
126 127 3.175594 ACCCCTATTCTGTTCACGGTTA 58.824 45.455 0.00 0.00 0.00 2.85
127 128 1.982958 ACCCCTATTCTGTTCACGGTT 59.017 47.619 0.00 0.00 0.00 4.44
128 129 1.652947 ACCCCTATTCTGTTCACGGT 58.347 50.000 0.00 0.00 0.00 4.83
129 130 2.356135 CAACCCCTATTCTGTTCACGG 58.644 52.381 0.00 0.00 0.00 4.94
130 131 1.737793 GCAACCCCTATTCTGTTCACG 59.262 52.381 0.00 0.00 0.00 4.35
131 132 2.092323 GGCAACCCCTATTCTGTTCAC 58.908 52.381 0.00 0.00 0.00 3.18
132 133 1.339631 CGGCAACCCCTATTCTGTTCA 60.340 52.381 0.00 0.00 0.00 3.18
133 134 1.065709 TCGGCAACCCCTATTCTGTTC 60.066 52.381 0.00 0.00 0.00 3.18
134 135 0.988832 TCGGCAACCCCTATTCTGTT 59.011 50.000 0.00 0.00 0.00 3.16
135 136 0.541863 CTCGGCAACCCCTATTCTGT 59.458 55.000 0.00 0.00 0.00 3.41
136 137 0.541863 ACTCGGCAACCCCTATTCTG 59.458 55.000 0.00 0.00 0.00 3.02
137 138 0.541863 CACTCGGCAACCCCTATTCT 59.458 55.000 0.00 0.00 0.00 2.40
138 139 0.252197 ACACTCGGCAACCCCTATTC 59.748 55.000 0.00 0.00 0.00 1.75
139 140 0.252197 GACACTCGGCAACCCCTATT 59.748 55.000 0.00 0.00 0.00 1.73
140 141 0.617820 AGACACTCGGCAACCCCTAT 60.618 55.000 0.00 0.00 0.00 2.57
141 142 1.229082 AGACACTCGGCAACCCCTA 60.229 57.895 0.00 0.00 0.00 3.53
142 143 2.526873 AGACACTCGGCAACCCCT 60.527 61.111 0.00 0.00 0.00 4.79
143 144 2.358737 CAGACACTCGGCAACCCC 60.359 66.667 0.00 0.00 0.00 4.95
144 145 1.668151 GTCAGACACTCGGCAACCC 60.668 63.158 0.00 0.00 0.00 4.11
145 146 0.601558 TAGTCAGACACTCGGCAACC 59.398 55.000 2.66 0.00 36.43 3.77
146 147 2.531206 GATAGTCAGACACTCGGCAAC 58.469 52.381 2.66 0.00 36.43 4.17
147 148 1.476891 GGATAGTCAGACACTCGGCAA 59.523 52.381 2.66 0.00 36.43 4.52
148 149 1.103803 GGATAGTCAGACACTCGGCA 58.896 55.000 2.66 0.00 36.43 5.69
149 150 1.103803 TGGATAGTCAGACACTCGGC 58.896 55.000 2.66 0.00 36.43 5.54
150 151 2.035193 CCATGGATAGTCAGACACTCGG 59.965 54.545 5.56 0.00 36.43 4.63
151 152 2.952310 TCCATGGATAGTCAGACACTCG 59.048 50.000 11.44 0.00 36.43 4.18
152 153 4.646945 TCTTCCATGGATAGTCAGACACTC 59.353 45.833 17.06 0.00 36.43 3.51
153 154 4.614475 TCTTCCATGGATAGTCAGACACT 58.386 43.478 17.06 0.00 39.41 3.55
154 155 5.112686 GTTCTTCCATGGATAGTCAGACAC 58.887 45.833 17.06 11.38 0.00 3.67
155 156 4.142160 CGTTCTTCCATGGATAGTCAGACA 60.142 45.833 17.06 3.61 0.00 3.41
156 157 4.363999 CGTTCTTCCATGGATAGTCAGAC 58.636 47.826 17.06 8.65 0.00 3.51
157 158 3.384789 CCGTTCTTCCATGGATAGTCAGA 59.615 47.826 17.06 12.24 0.00 3.27
158 159 3.384789 TCCGTTCTTCCATGGATAGTCAG 59.615 47.826 17.06 9.79 0.00 3.51
159 160 3.371034 TCCGTTCTTCCATGGATAGTCA 58.629 45.455 17.06 0.00 0.00 3.41
160 161 3.243907 CCTCCGTTCTTCCATGGATAGTC 60.244 52.174 17.06 11.73 31.02 2.59
161 162 2.700897 CCTCCGTTCTTCCATGGATAGT 59.299 50.000 17.06 0.00 31.02 2.12
162 163 2.700897 ACCTCCGTTCTTCCATGGATAG 59.299 50.000 17.06 15.38 31.02 2.08
163 164 2.759355 ACCTCCGTTCTTCCATGGATA 58.241 47.619 17.06 4.00 31.02 2.59
164 165 1.584724 ACCTCCGTTCTTCCATGGAT 58.415 50.000 17.06 0.00 31.02 3.41
165 166 1.358152 AACCTCCGTTCTTCCATGGA 58.642 50.000 11.44 11.44 0.00 3.41
166 167 2.420129 CCTAACCTCCGTTCTTCCATGG 60.420 54.545 4.97 4.97 33.17 3.66
167 168 2.500098 TCCTAACCTCCGTTCTTCCATG 59.500 50.000 0.00 0.00 33.17 3.66
168 169 2.829023 TCCTAACCTCCGTTCTTCCAT 58.171 47.619 0.00 0.00 33.17 3.41
169 170 2.314071 TCCTAACCTCCGTTCTTCCA 57.686 50.000 0.00 0.00 33.17 3.53
170 171 3.243805 GCTATCCTAACCTCCGTTCTTCC 60.244 52.174 0.00 0.00 33.17 3.46
171 172 3.637694 AGCTATCCTAACCTCCGTTCTTC 59.362 47.826 0.00 0.00 33.17 2.87
172 173 3.644335 AGCTATCCTAACCTCCGTTCTT 58.356 45.455 0.00 0.00 33.17 2.52
173 174 3.315880 AGCTATCCTAACCTCCGTTCT 57.684 47.619 0.00 0.00 33.17 3.01
174 175 3.132467 ACAAGCTATCCTAACCTCCGTTC 59.868 47.826 0.00 0.00 33.17 3.95
175 176 3.105283 ACAAGCTATCCTAACCTCCGTT 58.895 45.455 0.00 0.00 35.90 4.44
176 177 2.748388 ACAAGCTATCCTAACCTCCGT 58.252 47.619 0.00 0.00 0.00 4.69
177 178 3.458189 CAACAAGCTATCCTAACCTCCG 58.542 50.000 0.00 0.00 0.00 4.63
178 179 3.809905 CCAACAAGCTATCCTAACCTCC 58.190 50.000 0.00 0.00 0.00 4.30
179 180 3.118223 AGCCAACAAGCTATCCTAACCTC 60.118 47.826 0.00 0.00 42.70 3.85
180 181 2.846827 AGCCAACAAGCTATCCTAACCT 59.153 45.455 0.00 0.00 42.70 3.50
181 182 3.283259 AGCCAACAAGCTATCCTAACC 57.717 47.619 0.00 0.00 42.70 2.85
182 183 4.273724 GCTTAGCCAACAAGCTATCCTAAC 59.726 45.833 0.00 0.00 44.56 2.34
183 184 4.451900 GCTTAGCCAACAAGCTATCCTAA 58.548 43.478 0.00 0.00 44.56 2.69
184 185 4.073293 GCTTAGCCAACAAGCTATCCTA 57.927 45.455 0.00 0.00 44.56 2.94
185 186 2.924421 GCTTAGCCAACAAGCTATCCT 58.076 47.619 0.00 0.00 44.56 3.24
199 200 3.026694 ACATGGAGGATTTTGGCTTAGC 58.973 45.455 0.00 0.00 0.00 3.09
200 201 5.180117 CGATACATGGAGGATTTTGGCTTAG 59.820 44.000 0.00 0.00 0.00 2.18
201 202 5.063204 CGATACATGGAGGATTTTGGCTTA 58.937 41.667 0.00 0.00 0.00 3.09
202 203 3.885297 CGATACATGGAGGATTTTGGCTT 59.115 43.478 0.00 0.00 0.00 4.35
203 204 3.136443 TCGATACATGGAGGATTTTGGCT 59.864 43.478 0.00 0.00 0.00 4.75
204 205 3.476552 TCGATACATGGAGGATTTTGGC 58.523 45.455 0.00 0.00 0.00 4.52
205 206 3.499918 GCTCGATACATGGAGGATTTTGG 59.500 47.826 0.00 0.00 33.81 3.28
206 207 4.212847 CAGCTCGATACATGGAGGATTTTG 59.787 45.833 0.00 0.00 33.81 2.44
207 208 4.384056 CAGCTCGATACATGGAGGATTTT 58.616 43.478 0.00 0.00 33.81 1.82
208 209 3.805108 GCAGCTCGATACATGGAGGATTT 60.805 47.826 0.00 0.00 33.81 2.17
209 210 2.289320 GCAGCTCGATACATGGAGGATT 60.289 50.000 0.00 0.00 33.81 3.01
210 211 1.274728 GCAGCTCGATACATGGAGGAT 59.725 52.381 0.00 0.00 33.81 3.24
211 212 0.676184 GCAGCTCGATACATGGAGGA 59.324 55.000 0.00 0.00 33.81 3.71
212 213 0.678395 AGCAGCTCGATACATGGAGG 59.322 55.000 0.00 0.00 33.81 4.30
213 214 2.133553 CAAGCAGCTCGATACATGGAG 58.866 52.381 0.00 0.00 35.96 3.86
214 215 1.482182 ACAAGCAGCTCGATACATGGA 59.518 47.619 0.00 0.00 0.00 3.41
215 216 1.945387 ACAAGCAGCTCGATACATGG 58.055 50.000 0.00 0.00 0.00 3.66
216 217 4.346734 AAAACAAGCAGCTCGATACATG 57.653 40.909 0.00 0.00 0.00 3.21
237 238 6.293407 GCTTGTGTCTGTACTGATGCTAAAAA 60.293 38.462 5.69 0.00 0.00 1.94
238 239 5.179368 GCTTGTGTCTGTACTGATGCTAAAA 59.821 40.000 5.69 0.00 0.00 1.52
239 240 4.690748 GCTTGTGTCTGTACTGATGCTAAA 59.309 41.667 5.69 0.00 0.00 1.85
240 241 4.245660 GCTTGTGTCTGTACTGATGCTAA 58.754 43.478 5.69 0.07 0.00 3.09
241 242 3.673323 CGCTTGTGTCTGTACTGATGCTA 60.673 47.826 5.69 0.00 0.00 3.49
242 243 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
243 244 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
244 245 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
245 246 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
246 247 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
247 248 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
248 249 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
249 250 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
250 251 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
251 252 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
252 253 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
253 254 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
254 255 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
255 256 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
256 257 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
257 258 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
258 259 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
259 260 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
260 261 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
263 264 4.352039 AGTATATGCGCGTGTATATGAGC 58.648 43.478 24.28 15.73 38.85 4.26
264 265 5.452623 GTGAGTATATGCGCGTGTATATGAG 59.547 44.000 24.28 0.00 34.71 2.90
265 266 5.329493 GTGAGTATATGCGCGTGTATATGA 58.671 41.667 24.28 9.82 34.71 2.15
266 267 4.499399 GGTGAGTATATGCGCGTGTATATG 59.501 45.833 24.28 0.00 34.71 1.78
267 268 4.439700 GGGTGAGTATATGCGCGTGTATAT 60.440 45.833 20.79 20.79 37.23 0.86
268 269 3.119743 GGGTGAGTATATGCGCGTGTATA 60.120 47.826 13.61 9.23 0.00 1.47
269 270 2.352421 GGGTGAGTATATGCGCGTGTAT 60.352 50.000 13.61 9.22 0.00 2.29
270 271 1.001048 GGGTGAGTATATGCGCGTGTA 60.001 52.381 13.61 7.27 0.00 2.90
271 272 0.249322 GGGTGAGTATATGCGCGTGT 60.249 55.000 13.61 8.52 0.00 4.49
272 273 0.944311 GGGGTGAGTATATGCGCGTG 60.944 60.000 13.61 0.00 0.00 5.34
273 274 1.113517 AGGGGTGAGTATATGCGCGT 61.114 55.000 8.43 7.55 0.00 6.01
274 275 0.885879 TAGGGGTGAGTATATGCGCG 59.114 55.000 0.00 0.00 0.00 6.86
275 276 4.683832 CTTATAGGGGTGAGTATATGCGC 58.316 47.826 0.00 0.00 0.00 6.09
276 277 4.683832 GCTTATAGGGGTGAGTATATGCG 58.316 47.826 0.00 0.00 0.00 4.73
277 278 4.683832 CGCTTATAGGGGTGAGTATATGC 58.316 47.826 0.00 0.00 32.68 3.14
278 279 4.159693 TGCGCTTATAGGGGTGAGTATATG 59.840 45.833 9.73 0.00 0.00 1.78
279 280 4.159879 GTGCGCTTATAGGGGTGAGTATAT 59.840 45.833 9.73 0.00 0.00 0.86
280 281 3.508793 GTGCGCTTATAGGGGTGAGTATA 59.491 47.826 9.73 0.00 0.00 1.47
281 282 2.299297 GTGCGCTTATAGGGGTGAGTAT 59.701 50.000 9.73 0.00 0.00 2.12
282 283 1.684983 GTGCGCTTATAGGGGTGAGTA 59.315 52.381 9.73 0.00 0.00 2.59
283 284 0.464452 GTGCGCTTATAGGGGTGAGT 59.536 55.000 9.73 0.00 0.00 3.41
284 285 0.464036 TGTGCGCTTATAGGGGTGAG 59.536 55.000 9.73 0.00 0.00 3.51
285 286 0.177141 GTGTGCGCTTATAGGGGTGA 59.823 55.000 9.73 0.00 0.00 4.02
286 287 0.107897 TGTGTGCGCTTATAGGGGTG 60.108 55.000 9.73 0.00 0.00 4.61
287 288 0.107848 GTGTGTGCGCTTATAGGGGT 60.108 55.000 9.73 0.00 0.00 4.95
288 289 1.151777 CGTGTGTGCGCTTATAGGGG 61.152 60.000 9.73 0.00 0.00 4.79
289 290 2.297625 CGTGTGTGCGCTTATAGGG 58.702 57.895 9.73 0.00 0.00 3.53
299 300 1.635663 GATAGGGTGTGCGTGTGTGC 61.636 60.000 0.00 0.00 0.00 4.57
300 301 1.019278 GGATAGGGTGTGCGTGTGTG 61.019 60.000 0.00 0.00 0.00 3.82
301 302 1.295423 GGATAGGGTGTGCGTGTGT 59.705 57.895 0.00 0.00 0.00 3.72
302 303 1.449601 GGGATAGGGTGTGCGTGTG 60.450 63.158 0.00 0.00 0.00 3.82
303 304 0.324923 TAGGGATAGGGTGTGCGTGT 60.325 55.000 0.00 0.00 0.00 4.49
304 305 1.048601 ATAGGGATAGGGTGTGCGTG 58.951 55.000 0.00 0.00 0.00 5.34
305 306 1.048601 CATAGGGATAGGGTGTGCGT 58.951 55.000 0.00 0.00 0.00 5.24
306 307 1.273606 CTCATAGGGATAGGGTGTGCG 59.726 57.143 0.00 0.00 0.00 5.34
307 308 1.002544 GCTCATAGGGATAGGGTGTGC 59.997 57.143 0.00 0.00 0.00 4.57
308 309 2.329267 TGCTCATAGGGATAGGGTGTG 58.671 52.381 0.00 0.00 0.00 3.82
309 310 2.795291 TGCTCATAGGGATAGGGTGT 57.205 50.000 0.00 0.00 0.00 4.16
310 311 4.566488 GGAAATGCTCATAGGGATAGGGTG 60.566 50.000 0.00 0.00 0.00 4.61
311 312 3.589288 GGAAATGCTCATAGGGATAGGGT 59.411 47.826 0.00 0.00 0.00 4.34
312 313 3.369892 CGGAAATGCTCATAGGGATAGGG 60.370 52.174 0.00 0.00 0.00 3.53
313 314 3.515502 TCGGAAATGCTCATAGGGATAGG 59.484 47.826 0.00 0.00 0.00 2.57
314 315 4.808414 TCGGAAATGCTCATAGGGATAG 57.192 45.455 0.00 0.00 0.00 2.08
315 316 5.306937 TCTTTCGGAAATGCTCATAGGGATA 59.693 40.000 3.24 0.00 0.00 2.59
316 317 4.103153 TCTTTCGGAAATGCTCATAGGGAT 59.897 41.667 3.24 0.00 0.00 3.85
317 318 3.454447 TCTTTCGGAAATGCTCATAGGGA 59.546 43.478 3.24 0.00 0.00 4.20
318 319 3.561725 GTCTTTCGGAAATGCTCATAGGG 59.438 47.826 3.24 0.00 0.00 3.53
319 320 4.272018 CAGTCTTTCGGAAATGCTCATAGG 59.728 45.833 3.24 0.00 0.00 2.57
320 321 5.111989 TCAGTCTTTCGGAAATGCTCATAG 58.888 41.667 3.24 0.00 0.00 2.23
321 322 5.084818 TCAGTCTTTCGGAAATGCTCATA 57.915 39.130 3.24 0.00 0.00 2.15
322 323 3.937706 CTCAGTCTTTCGGAAATGCTCAT 59.062 43.478 3.24 0.00 0.00 2.90
323 324 3.329386 CTCAGTCTTTCGGAAATGCTCA 58.671 45.455 3.24 0.00 0.00 4.26
324 325 2.095053 GCTCAGTCTTTCGGAAATGCTC 59.905 50.000 3.24 0.00 0.00 4.26
325 326 2.079925 GCTCAGTCTTTCGGAAATGCT 58.920 47.619 3.24 2.75 0.00 3.79
326 327 1.131315 GGCTCAGTCTTTCGGAAATGC 59.869 52.381 3.24 0.45 0.00 3.56
327 328 1.394917 CGGCTCAGTCTTTCGGAAATG 59.605 52.381 3.24 0.06 0.00 2.32
328 329 1.676014 CCGGCTCAGTCTTTCGGAAAT 60.676 52.381 3.24 0.00 42.94 2.17
329 330 0.320421 CCGGCTCAGTCTTTCGGAAA 60.320 55.000 2.78 2.78 42.94 3.13
330 331 1.292223 CCGGCTCAGTCTTTCGGAA 59.708 57.895 0.00 0.00 42.94 4.30
331 332 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
332 333 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
333 334 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
334 335 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
335 336 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
336 337 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
337 338 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
338 339 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
339 340 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
340 341 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
341 342 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
342 343 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
343 344 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
344 345 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
345 346 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
346 347 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
347 348 7.623089 GCTTCGTAAATCTCAAGATGATATGCC 60.623 40.741 0.00 0.00 34.49 4.40
348 349 7.095481 TGCTTCGTAAATCTCAAGATGATATGC 60.095 37.037 0.00 0.00 34.49 3.14
349 350 8.302965 TGCTTCGTAAATCTCAAGATGATATG 57.697 34.615 0.00 0.00 34.49 1.78
350 351 8.768955 GTTGCTTCGTAAATCTCAAGATGATAT 58.231 33.333 0.00 0.00 34.49 1.63
351 352 7.224753 GGTTGCTTCGTAAATCTCAAGATGATA 59.775 37.037 0.00 0.00 34.49 2.15
352 353 6.037610 GGTTGCTTCGTAAATCTCAAGATGAT 59.962 38.462 0.00 0.00 34.49 2.45
353 354 5.351465 GGTTGCTTCGTAAATCTCAAGATGA 59.649 40.000 0.00 0.00 34.49 2.92
354 355 5.563842 GGTTGCTTCGTAAATCTCAAGATG 58.436 41.667 0.00 0.00 34.49 2.90
355 356 4.330074 CGGTTGCTTCGTAAATCTCAAGAT 59.670 41.667 0.00 0.00 36.07 2.40
356 357 3.678072 CGGTTGCTTCGTAAATCTCAAGA 59.322 43.478 0.00 0.00 0.00 3.02
357 358 3.432252 ACGGTTGCTTCGTAAATCTCAAG 59.568 43.478 0.00 0.00 39.22 3.02
358 359 3.395639 ACGGTTGCTTCGTAAATCTCAA 58.604 40.909 0.00 0.00 39.22 3.02
359 360 3.034721 ACGGTTGCTTCGTAAATCTCA 57.965 42.857 0.00 0.00 39.22 3.27
360 361 3.550678 CCTACGGTTGCTTCGTAAATCTC 59.449 47.826 7.80 0.00 41.62 2.75
361 362 3.518590 CCTACGGTTGCTTCGTAAATCT 58.481 45.455 7.80 0.00 41.62 2.40
362 363 2.030091 GCCTACGGTTGCTTCGTAAATC 59.970 50.000 7.80 0.00 41.62 2.17
363 364 2.004733 GCCTACGGTTGCTTCGTAAAT 58.995 47.619 7.80 0.00 41.62 1.40
364 365 1.431496 GCCTACGGTTGCTTCGTAAA 58.569 50.000 7.80 0.00 41.62 2.01
365 366 0.733566 CGCCTACGGTTGCTTCGTAA 60.734 55.000 7.80 0.00 41.62 3.18
366 367 1.153978 CGCCTACGGTTGCTTCGTA 60.154 57.895 6.60 6.60 41.38 3.43
367 368 2.431942 CGCCTACGGTTGCTTCGT 60.432 61.111 5.13 5.13 43.64 3.85
368 369 3.849953 GCGCCTACGGTTGCTTCG 61.850 66.667 0.00 0.00 40.57 3.79
369 370 3.497031 GGCGCCTACGGTTGCTTC 61.497 66.667 22.15 0.00 40.57 3.86
370 371 3.952628 GAGGCGCCTACGGTTGCTT 62.953 63.158 32.97 2.04 40.57 3.91
371 372 4.452733 GAGGCGCCTACGGTTGCT 62.453 66.667 32.97 3.02 40.57 3.91
373 374 4.430765 ACGAGGCGCCTACGGTTG 62.431 66.667 34.97 21.03 40.57 3.77
374 375 4.125695 GACGAGGCGCCTACGGTT 62.126 66.667 34.97 23.48 40.57 4.44
377 378 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
400 401 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
401 402 1.420430 TTTCAGTGGGAGGAGACGTT 58.580 50.000 0.00 0.00 0.00 3.99
402 403 1.550976 GATTTCAGTGGGAGGAGACGT 59.449 52.381 0.00 0.00 0.00 4.34
403 404 1.469940 CGATTTCAGTGGGAGGAGACG 60.470 57.143 0.00 0.00 0.00 4.18
404 405 1.740718 GCGATTTCAGTGGGAGGAGAC 60.741 57.143 0.00 0.00 0.00 3.36
405 406 0.537188 GCGATTTCAGTGGGAGGAGA 59.463 55.000 0.00 0.00 0.00 3.71
406 407 0.250234 TGCGATTTCAGTGGGAGGAG 59.750 55.000 0.00 0.00 0.00 3.69
407 408 0.911769 ATGCGATTTCAGTGGGAGGA 59.088 50.000 0.00 0.00 0.00 3.71
408 409 1.303309 GATGCGATTTCAGTGGGAGG 58.697 55.000 0.00 0.00 0.00 4.30
409 410 0.933097 CGATGCGATTTCAGTGGGAG 59.067 55.000 0.00 0.00 0.00 4.30
410 411 1.089481 GCGATGCGATTTCAGTGGGA 61.089 55.000 0.00 0.00 0.00 4.37
411 412 1.353103 GCGATGCGATTTCAGTGGG 59.647 57.895 0.00 0.00 0.00 4.61
412 413 1.353103 GGCGATGCGATTTCAGTGG 59.647 57.895 0.00 0.00 0.00 4.00
413 414 1.011904 CGGCGATGCGATTTCAGTG 60.012 57.895 0.00 0.00 0.00 3.66
414 415 2.173669 CCGGCGATGCGATTTCAGT 61.174 57.895 9.30 0.00 0.00 3.41
415 416 1.428370 TTCCGGCGATGCGATTTCAG 61.428 55.000 9.30 0.00 0.00 3.02
416 417 1.021920 TTTCCGGCGATGCGATTTCA 61.022 50.000 9.30 0.00 0.00 2.69
417 418 0.307760 ATTTCCGGCGATGCGATTTC 59.692 50.000 9.30 0.00 0.00 2.17
418 419 0.307760 GATTTCCGGCGATGCGATTT 59.692 50.000 9.30 0.00 0.00 2.17
419 420 1.507141 GGATTTCCGGCGATGCGATT 61.507 55.000 9.30 0.00 0.00 3.34
420 421 1.961277 GGATTTCCGGCGATGCGAT 60.961 57.895 9.30 0.00 0.00 4.58
421 422 2.587753 GGATTTCCGGCGATGCGA 60.588 61.111 9.30 0.00 0.00 5.10
422 423 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
423 424 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
424 425 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
425 426 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
426 427 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
427 428 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
428 429 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
429 430 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
437 438 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
438 439 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
439 440 7.815840 TCGCATTATTCCTGGATTTATTTCA 57.184 32.000 0.00 0.00 0.00 2.69
440 441 9.346725 GATTCGCATTATTCCTGGATTTATTTC 57.653 33.333 0.00 0.00 0.00 2.17
441 442 8.023128 CGATTCGCATTATTCCTGGATTTATTT 58.977 33.333 0.00 0.00 0.00 1.40
442 443 7.390440 TCGATTCGCATTATTCCTGGATTTATT 59.610 33.333 0.00 0.00 0.00 1.40
443 444 6.878923 TCGATTCGCATTATTCCTGGATTTAT 59.121 34.615 0.00 0.00 0.00 1.40
444 445 6.227522 TCGATTCGCATTATTCCTGGATTTA 58.772 36.000 0.00 0.00 0.00 1.40
445 446 5.063204 TCGATTCGCATTATTCCTGGATTT 58.937 37.500 0.00 0.00 0.00 2.17
446 447 4.641396 TCGATTCGCATTATTCCTGGATT 58.359 39.130 0.00 0.00 0.00 3.01
447 448 4.271696 TCGATTCGCATTATTCCTGGAT 57.728 40.909 0.00 0.00 0.00 3.41
448 449 3.744238 TCGATTCGCATTATTCCTGGA 57.256 42.857 0.00 0.00 0.00 3.86
449 450 3.809832 AGTTCGATTCGCATTATTCCTGG 59.190 43.478 0.00 0.00 0.00 4.45
450 451 4.766007 CAGTTCGATTCGCATTATTCCTG 58.234 43.478 0.00 0.00 0.00 3.86
451 452 3.248602 GCAGTTCGATTCGCATTATTCCT 59.751 43.478 0.00 0.00 0.00 3.36
452 453 3.248602 AGCAGTTCGATTCGCATTATTCC 59.751 43.478 0.00 0.00 0.00 3.01
453 454 4.458951 AGCAGTTCGATTCGCATTATTC 57.541 40.909 0.00 0.00 0.00 1.75
454 455 4.094887 ACAAGCAGTTCGATTCGCATTATT 59.905 37.500 0.00 0.00 0.00 1.40
455 456 3.623060 ACAAGCAGTTCGATTCGCATTAT 59.377 39.130 0.00 0.00 0.00 1.28
456 457 3.000041 ACAAGCAGTTCGATTCGCATTA 59.000 40.909 0.00 0.00 0.00 1.90
457 458 1.806542 ACAAGCAGTTCGATTCGCATT 59.193 42.857 0.00 0.00 0.00 3.56
458 459 1.442769 ACAAGCAGTTCGATTCGCAT 58.557 45.000 0.00 0.00 0.00 4.73
459 460 1.225855 AACAAGCAGTTCGATTCGCA 58.774 45.000 0.00 0.00 34.74 5.10
460 461 2.666508 TCTAACAAGCAGTTCGATTCGC 59.333 45.455 0.00 0.00 41.64 4.70
461 462 4.903638 TTCTAACAAGCAGTTCGATTCG 57.096 40.909 0.00 0.00 41.64 3.34
462 463 6.170675 ACATTCTAACAAGCAGTTCGATTC 57.829 37.500 0.00 0.00 41.64 2.52
463 464 6.649141 TGTACATTCTAACAAGCAGTTCGATT 59.351 34.615 0.00 0.00 41.64 3.34
464 465 6.163476 TGTACATTCTAACAAGCAGTTCGAT 58.837 36.000 0.00 0.00 41.64 3.59
465 466 5.534407 TGTACATTCTAACAAGCAGTTCGA 58.466 37.500 0.00 0.00 41.64 3.71
466 467 5.839262 TGTACATTCTAACAAGCAGTTCG 57.161 39.130 0.00 0.00 41.64 3.95
467 468 9.922305 GAATATGTACATTCTAACAAGCAGTTC 57.078 33.333 14.77 0.00 41.64 3.01
468 469 8.893727 GGAATATGTACATTCTAACAAGCAGTT 58.106 33.333 14.77 0.22 36.70 3.16
469 470 7.224753 CGGAATATGTACATTCTAACAAGCAGT 59.775 37.037 14.77 0.00 35.61 4.40
470 471 7.224753 ACGGAATATGTACATTCTAACAAGCAG 59.775 37.037 14.77 0.00 35.61 4.24
471 472 7.045416 ACGGAATATGTACATTCTAACAAGCA 58.955 34.615 14.77 0.00 35.61 3.91
904 920 1.307309 CATTGAGGATGGGGTGGCA 59.693 57.895 0.00 0.00 31.83 4.92
1263 1279 4.782116 CGCGCGTACTCGTCGACA 62.782 66.667 24.19 1.87 38.23 4.35
1302 1318 0.179111 GATCAATGTCCGCGAGACCA 60.179 55.000 20.21 11.61 45.68 4.02
1391 1408 1.065410 TGTGTCCCCCAGAACCACAT 61.065 55.000 0.00 0.00 29.17 3.21
1454 1471 4.148825 CCTGGTTCTCCTCGGCGG 62.149 72.222 7.21 0.00 34.23 6.13
1606 1624 2.768344 ATCCGAGGGCCGTTCCAT 60.768 61.111 0.00 0.00 36.21 3.41
1607 1625 3.467226 GATCCGAGGGCCGTTCCA 61.467 66.667 0.00 0.00 36.21 3.53
1625 1643 3.339093 GCTACTGGTTGGGGCCCT 61.339 66.667 25.93 4.22 0.00 5.19
1941 1995 0.179062 GAAGCATGGCGAGGTGATCT 60.179 55.000 0.00 0.00 0.00 2.75
2041 2102 4.426704 AGGTTACCAGAGTTACCAGTCAT 58.573 43.478 3.51 0.00 46.14 3.06
2046 2107 2.901839 GGTGAGGTTACCAGAGTTACCA 59.098 50.000 3.51 0.00 46.14 3.25
2612 2677 5.127491 TGATAACCGGAAAAACTCACAACT 58.873 37.500 9.46 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.