Multiple sequence alignment - TraesCS1B01G334200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G334200 chr1B 100.000 4508 0 0 754 5261 561504143 561508650 0.000000e+00 8325
1 TraesCS1B01G334200 chr1B 100.000 427 0 0 1 427 561503390 561503816 0.000000e+00 789
2 TraesCS1B01G334200 chr1D 91.802 4062 218 54 754 4741 415290889 415294909 0.000000e+00 5550
3 TraesCS1B01G334200 chr1D 92.492 333 16 4 4936 5260 415294917 415295248 7.980000e-128 468
4 TraesCS1B01G334200 chr1D 87.339 387 14 15 25 391 415290214 415290585 1.360000e-110 411
5 TraesCS1B01G334200 chr1A 94.760 2080 89 9 1518 3593 512655240 512657303 0.000000e+00 3219
6 TraesCS1B01G334200 chr1A 94.249 1165 64 3 3588 4751 512657978 512659140 0.000000e+00 1777
7 TraesCS1B01G334200 chr1A 88.235 697 41 14 1007 1671 512654562 512655249 0.000000e+00 795
8 TraesCS1B01G334200 chr1A 84.798 421 34 16 24 427 512623184 512623591 3.820000e-106 396
9 TraesCS1B01G334200 chr1A 81.996 461 21 17 1 427 512653869 512654301 8.440000e-88 335
10 TraesCS1B01G334200 chr5A 85.044 341 32 11 4915 5247 237957443 237957114 3.930000e-86 329
11 TraesCS1B01G334200 chr3A 83.918 342 34 13 4915 5247 123779824 123780153 1.840000e-79 307
12 TraesCS1B01G334200 chr7D 82.709 347 41 10 4915 5253 546693889 546693554 1.850000e-74 291
13 TraesCS1B01G334200 chr3B 82.770 296 25 11 4970 5253 152121225 152120944 1.890000e-59 241
14 TraesCS1B01G334200 chr4B 89.720 107 11 0 1343 1449 624389337 624389231 2.560000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G334200 chr1B 561503390 561508650 5260 False 4557.0 8325 100.000000 1 5261 2 chr1B.!!$F1 5260
1 TraesCS1B01G334200 chr1D 415290214 415295248 5034 False 2143.0 5550 90.544333 25 5260 3 chr1D.!!$F1 5235
2 TraesCS1B01G334200 chr1A 512653869 512659140 5271 False 1531.5 3219 89.810000 1 4751 4 chr1A.!!$F2 4750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
882 1210 0.318275 CTTCCTCTGCGCCGATAGTC 60.318 60.000 4.18 0.00 0.00 2.59 F
1267 1630 0.179043 CTCTGATGCTGCTCCATGCT 60.179 55.000 0.00 0.00 43.37 3.79 F
1314 1685 0.698238 TTGGTGATTGCTAGGGCTGT 59.302 50.000 0.00 0.00 39.59 4.40 F
1396 1778 0.802494 ATTCGGTCGTTGCCATGAAC 59.198 50.000 0.00 0.00 0.00 3.18 F
1526 1931 0.863144 CAAACAGCTGCATGCAAACC 59.137 50.000 22.88 12.77 45.94 3.27 F
2302 2851 1.196581 TGCATGATGAACGGTTCAACG 59.803 47.619 25.64 15.26 43.95 4.10 F
3036 3585 1.634973 TCACCTTCCAGCATTCCATCA 59.365 47.619 0.00 0.00 0.00 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2803 3352 0.830648 CCTCCCAATTCCGCTCTACA 59.169 55.000 0.00 0.00 0.00 2.74 R
3218 3768 4.341366 TGCATTTCTTCTCACTGAGACA 57.659 40.909 8.35 0.00 38.51 3.41 R
3310 3860 0.319405 GCAGGCAGCAATTGAAACCT 59.681 50.000 10.34 8.64 44.79 3.50 R
3403 3953 5.649782 ATGCTACAACAAAGAATTGAGGG 57.350 39.130 0.00 0.00 38.94 4.30 R
3510 4060 0.524862 GACCAAAGCAGTCCAGCATG 59.475 55.000 0.00 0.00 36.85 4.06 R
3700 4930 0.107263 TCAAGCAAGTCACACTGCCA 60.107 50.000 0.00 0.00 0.00 4.92 R
4875 6114 0.108424 CCCTCCAAGCTCTGAACGAG 60.108 60.000 0.00 0.00 42.88 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.322816 GCAAGAGGCTCATCCAACCA 60.323 55.000 18.26 0.00 40.25 3.67
28 29 2.551270 AGAGGCTCATCCAACCAACTA 58.449 47.619 18.26 0.00 37.29 2.24
59 67 7.504238 AGGAATTATTACAACACAACACCTGAA 59.496 33.333 0.00 0.00 0.00 3.02
60 68 8.303876 GGAATTATTACAACACAACACCTGAAT 58.696 33.333 0.00 0.00 0.00 2.57
292 324 2.115266 CCCATACCCAATCCGCCC 59.885 66.667 0.00 0.00 0.00 6.13
296 328 2.516888 ATACCCAATCCGCCCTCCG 61.517 63.158 0.00 0.00 0.00 4.63
370 408 1.002274 AGCCAAAACCCCACCAACA 59.998 52.632 0.00 0.00 0.00 3.33
371 409 1.145156 GCCAAAACCCCACCAACAC 59.855 57.895 0.00 0.00 0.00 3.32
372 410 1.439644 CCAAAACCCCACCAACACG 59.560 57.895 0.00 0.00 0.00 4.49
373 411 1.038130 CCAAAACCCCACCAACACGA 61.038 55.000 0.00 0.00 0.00 4.35
847 1175 3.930012 GGATCTCCCCCGCTTCCG 61.930 72.222 0.00 0.00 0.00 4.30
859 1187 3.423154 CTTCCGCCAAGCACGACC 61.423 66.667 0.00 0.00 0.00 4.79
868 1196 2.574955 AAGCACGACCGAGCTTCCT 61.575 57.895 18.45 0.73 46.06 3.36
870 1198 2.995872 GCACGACCGAGCTTCCTCT 61.996 63.158 4.67 0.00 35.90 3.69
871 1199 1.153939 CACGACCGAGCTTCCTCTG 60.154 63.158 0.00 0.00 35.90 3.35
873 1201 2.202676 GACCGAGCTTCCTCTGCG 60.203 66.667 0.00 0.00 35.90 5.18
877 1205 4.135153 GAGCTTCCTCTGCGCCGA 62.135 66.667 4.18 2.10 35.16 5.54
878 1206 3.438017 GAGCTTCCTCTGCGCCGAT 62.438 63.158 4.18 0.00 35.16 4.18
879 1207 2.076622 GAGCTTCCTCTGCGCCGATA 62.077 60.000 4.18 0.00 35.16 2.92
882 1210 0.318275 CTTCCTCTGCGCCGATAGTC 60.318 60.000 4.18 0.00 0.00 2.59
913 1254 1.965930 TTCGGCAGCAGCATTTCGT 60.966 52.632 2.65 0.00 44.61 3.85
922 1263 2.747446 AGCAGCATTTCGTACCGAATTT 59.253 40.909 0.00 0.00 45.28 1.82
924 1265 3.669557 GCAGCATTTCGTACCGAATTTGT 60.670 43.478 0.00 0.00 45.28 2.83
930 1271 2.679450 TCGTACCGAATTTGTGTCCAG 58.321 47.619 0.00 0.00 31.06 3.86
945 1297 3.501911 CAGGGGGATTGCCGGGAT 61.502 66.667 2.18 0.00 33.83 3.85
959 1312 3.621394 GGATGTTCGAGCGCGCTC 61.621 66.667 43.32 43.32 39.55 5.03
995 1348 4.593864 GGGACGGCCGAGCTCATC 62.594 72.222 35.90 17.99 33.83 2.92
1004 1357 2.976903 GAGCTCATCGGGCATGCC 60.977 66.667 29.47 29.47 31.70 4.40
1005 1358 3.762429 GAGCTCATCGGGCATGCCA 62.762 63.158 36.56 19.35 37.98 4.92
1099 1460 2.094545 GCTTTGTTGCCACTATTGGGAG 60.095 50.000 0.73 0.00 45.39 4.30
1220 1583 3.319198 GGGAAGGGCGACAGGTGA 61.319 66.667 0.00 0.00 0.00 4.02
1231 1594 1.469940 CGACAGGTGAGGAAATCTCGG 60.470 57.143 0.00 0.00 45.32 4.63
1267 1630 0.179043 CTCTGATGCTGCTCCATGCT 60.179 55.000 0.00 0.00 43.37 3.79
1282 1645 1.393539 CATGCTCGGTCGATTTTCGTT 59.606 47.619 0.00 0.00 41.35 3.85
1286 1649 2.063266 CTCGGTCGATTTTCGTTGGAA 58.937 47.619 0.00 0.00 41.35 3.53
1301 1664 3.563808 CGTTGGAATTTCTCTGTTGGTGA 59.436 43.478 0.00 0.00 0.00 4.02
1310 1681 2.237143 TCTCTGTTGGTGATTGCTAGGG 59.763 50.000 0.00 0.00 0.00 3.53
1314 1685 0.698238 TTGGTGATTGCTAGGGCTGT 59.302 50.000 0.00 0.00 39.59 4.40
1351 1733 3.807538 GTGCGCTGGCCTGTGATG 61.808 66.667 25.62 7.96 38.85 3.07
1360 1742 1.375098 GGCCTGTGATGCTTCTGCTC 61.375 60.000 0.00 0.00 40.48 4.26
1396 1778 0.802494 ATTCGGTCGTTGCCATGAAC 59.198 50.000 0.00 0.00 0.00 3.18
1431 1813 1.269958 TGACCCCTGACATGTCTGAG 58.730 55.000 28.47 21.66 0.00 3.35
1526 1931 0.863144 CAAACAGCTGCATGCAAACC 59.137 50.000 22.88 12.77 45.94 3.27
1589 2134 4.847255 GCAGATGTTTGCCGTGAC 57.153 55.556 0.00 0.00 38.13 3.67
1678 2225 2.821378 CTCACATGCTGAAAACCATCCA 59.179 45.455 0.00 0.00 0.00 3.41
1686 2234 3.005684 GCTGAAAACCATCCATGTCAACA 59.994 43.478 0.00 0.00 0.00 3.33
1698 2246 4.346734 CATGTCAACATGTCAGTTAGGC 57.653 45.455 13.75 0.00 46.40 3.93
1702 2250 2.371841 TCAACATGTCAGTTAGGCCTGT 59.628 45.455 17.99 0.00 31.71 4.00
1753 2301 2.722094 TCAGGATGTATTTGCCCACAC 58.278 47.619 0.00 0.00 37.40 3.82
1770 2319 4.515567 CCCACACAGTTTAAGGACTTCTTC 59.484 45.833 0.00 0.00 36.93 2.87
1800 2349 1.496060 TCACCTACAGGGGCATACAG 58.504 55.000 0.00 0.00 38.88 2.74
1823 2372 3.245229 ACATGCATTCTGGTTTCCCTGTA 60.245 43.478 0.00 0.00 0.00 2.74
1843 2392 4.716784 TGTAGCTTCTGGACTTGTGGATAT 59.283 41.667 0.00 0.00 0.00 1.63
1863 2412 6.756542 GGATATTGACATTTGTTTAGGGTTGC 59.243 38.462 0.00 0.00 0.00 4.17
1883 2432 3.973206 CCAGGTTGTGGTATCACTGTA 57.027 47.619 7.81 0.00 43.94 2.74
1920 2469 8.687242 TGGATATGCGGATTTATCTACTTAGAG 58.313 37.037 0.00 0.00 35.50 2.43
1938 2487 6.494146 ACTTAGAGTTACTGCTAGTTGGAACT 59.506 38.462 12.46 12.46 42.91 3.01
1966 2515 8.966868 TCTTTTTGTGTTAACTTTCTCTTGGAT 58.033 29.630 7.22 0.00 0.00 3.41
2059 2608 6.044682 CCCTTATTTTGGCTATCTTTGCTTG 58.955 40.000 0.00 0.00 0.00 4.01
2172 2721 2.408271 TGCTTATGCCTTGGTCTCAG 57.592 50.000 0.00 0.00 38.71 3.35
2203 2752 3.564644 GTGCAGATCTCATTTCTCCCATG 59.435 47.826 0.00 0.00 0.00 3.66
2261 2810 5.406477 GGGAATGTGAATTGCAGAAAAGAAC 59.594 40.000 0.00 0.00 0.00 3.01
2269 2818 6.873076 TGAATTGCAGAAAAGAACAACTGTTT 59.127 30.769 0.00 0.00 38.56 2.83
2302 2851 1.196581 TGCATGATGAACGGTTCAACG 59.803 47.619 25.64 15.26 43.95 4.10
2371 2920 3.149981 CCCTCCTGGTCTTTCAAGTTTC 58.850 50.000 0.00 0.00 0.00 2.78
2740 3289 5.268118 TGCAGTCTATCAAGTACATCCTG 57.732 43.478 0.00 0.00 0.00 3.86
2803 3352 9.807649 GCATTTCACATTATTGAGTTTATTCCT 57.192 29.630 0.00 0.00 0.00 3.36
3023 3572 8.134895 TGAAACTATTGTTGAATGTTCACCTTC 58.865 33.333 0.00 0.00 36.83 3.46
3036 3585 1.634973 TCACCTTCCAGCATTCCATCA 59.365 47.619 0.00 0.00 0.00 3.07
3139 3688 8.893727 ACTTATTAATTGCTCTTTTACTCGCAT 58.106 29.630 0.00 0.00 31.77 4.73
3146 3695 4.750098 TGCTCTTTTACTCGCATAATAGCC 59.250 41.667 0.00 0.00 0.00 3.93
3157 3706 3.750130 CGCATAATAGCCTTCTGCATCTT 59.250 43.478 7.46 0.00 44.83 2.40
3218 3768 4.018490 TGTGGATGCTGATTTGTGCTAAT 58.982 39.130 0.00 0.00 0.00 1.73
3310 3860 5.796502 ATGTCCTCCTTCCCAAGATAAAA 57.203 39.130 0.00 0.00 0.00 1.52
3377 3927 1.672854 TAACCATCTGTCTCCGCCCG 61.673 60.000 0.00 0.00 0.00 6.13
3436 3986 7.422399 TCTTTGTTGTAGCATTTGTAAGGAAC 58.578 34.615 0.00 0.00 0.00 3.62
3510 4060 6.909357 GTGCATTTATCAGACATTAGCACTTC 59.091 38.462 0.00 0.00 44.49 3.01
3512 4062 7.283807 TGCATTTATCAGACATTAGCACTTCAT 59.716 33.333 0.00 0.00 0.00 2.57
3570 4120 5.069781 AGTTAGACCATCCTGTCTTATGAGC 59.930 44.000 0.00 0.00 42.92 4.26
3596 4826 6.016360 TCTGAAACAACATCCCAAGTACATTG 60.016 38.462 0.00 0.00 38.74 2.82
3690 4920 4.714802 TGGTAGAGCTCAAACATAAGCCTA 59.285 41.667 17.77 0.00 39.39 3.93
3700 4930 8.193438 GCTCAAACATAAGCCTAATGAATTCTT 58.807 33.333 7.05 0.00 32.22 2.52
3807 5037 2.417719 GTCCCACTGACTTGTAGCTTG 58.582 52.381 0.00 0.00 41.03 4.01
3904 5134 1.911766 GACCCTTCCGAGGTCCACA 60.912 63.158 0.00 0.00 46.85 4.17
3939 5169 1.763968 TCCAGGTCTCTGACATACCG 58.236 55.000 0.07 0.00 43.49 4.02
3969 5199 0.176680 ACGAAGTATCCAGCTGGCTG 59.823 55.000 28.91 14.88 41.94 4.85
4083 5313 0.584396 TCAAGTGCGTCGCGAATTTT 59.416 45.000 12.06 0.00 0.00 1.82
4160 5390 3.047877 GTTCAGGGTGTTCGCGGG 61.048 66.667 6.13 0.00 0.00 6.13
4464 5694 4.213270 CGAAGACTGCATTACAAAAGTGGA 59.787 41.667 0.00 0.00 0.00 4.02
4495 5725 0.244450 TCGGTCGCCACGTATCTTTT 59.756 50.000 0.00 0.00 0.00 2.27
4506 5736 6.914215 CGCCACGTATCTTTTGTCTATACTTA 59.086 38.462 0.00 0.00 0.00 2.24
4558 5795 8.662781 TGTGCCACTCTATTTCAGTTTATATC 57.337 34.615 0.00 0.00 0.00 1.63
4560 5797 6.929049 TGCCACTCTATTTCAGTTTATATCGG 59.071 38.462 0.00 0.00 0.00 4.18
4574 5811 1.352114 TATCGGCGAAACTGAAACCG 58.648 50.000 15.93 0.00 45.15 4.44
4610 5848 4.715527 ATGCTTGAGGAATTCTTTCAGC 57.284 40.909 5.23 9.72 33.23 4.26
4652 5890 2.851534 GCCGAAGCTGTTAACATCAAC 58.148 47.619 9.13 2.70 35.50 3.18
4667 5905 4.787551 ACATCAACCAGTGTTTTCTACCA 58.212 39.130 0.00 0.00 30.42 3.25
4669 5907 5.833131 ACATCAACCAGTGTTTTCTACCAAT 59.167 36.000 0.00 0.00 30.42 3.16
4713 5951 8.386606 CGAATCAGTTTTGAAAACAAATGGAAA 58.613 29.630 21.34 0.00 36.78 3.13
4741 5980 3.071602 TCCTTTGAAACTGCTAGCTGACT 59.928 43.478 26.29 13.15 0.00 3.41
4747 5986 2.284921 TGCTAGCTGACTGCCCCT 60.285 61.111 17.23 0.00 44.23 4.79
4751 5990 1.490574 CTAGCTGACTGCCCCTAACT 58.509 55.000 0.00 0.00 44.23 2.24
4752 5991 1.137872 CTAGCTGACTGCCCCTAACTG 59.862 57.143 0.00 0.00 44.23 3.16
4753 5992 1.746991 GCTGACTGCCCCTAACTGC 60.747 63.158 0.00 0.00 35.15 4.40
4754 5993 1.078143 CTGACTGCCCCTAACTGCC 60.078 63.158 0.00 0.00 0.00 4.85
4755 5994 2.272471 GACTGCCCCTAACTGCCC 59.728 66.667 0.00 0.00 0.00 5.36
4756 5995 3.339093 ACTGCCCCTAACTGCCCC 61.339 66.667 0.00 0.00 0.00 5.80
4757 5996 3.017581 CTGCCCCTAACTGCCCCT 61.018 66.667 0.00 0.00 0.00 4.79
4758 5997 1.692749 CTGCCCCTAACTGCCCCTA 60.693 63.158 0.00 0.00 0.00 3.53
4759 5998 1.230017 TGCCCCTAACTGCCCCTAA 60.230 57.895 0.00 0.00 0.00 2.69
4760 5999 1.226542 GCCCCTAACTGCCCCTAAC 59.773 63.158 0.00 0.00 0.00 2.34
4761 6000 1.279749 GCCCCTAACTGCCCCTAACT 61.280 60.000 0.00 0.00 0.00 2.24
4762 6001 0.546598 CCCCTAACTGCCCCTAACTG 59.453 60.000 0.00 0.00 0.00 3.16
4763 6002 0.107165 CCCTAACTGCCCCTAACTGC 60.107 60.000 0.00 0.00 0.00 4.40
4764 6003 0.618458 CCTAACTGCCCCTAACTGCA 59.382 55.000 0.00 0.00 35.86 4.41
4768 6007 4.571236 TGCCCCTAACTGCAGGTA 57.429 55.556 19.93 15.89 33.44 3.08
4769 6008 3.021356 TGCCCCTAACTGCAGGTAT 57.979 52.632 19.93 6.41 33.44 2.73
4770 6009 0.546122 TGCCCCTAACTGCAGGTATG 59.454 55.000 19.93 13.01 33.44 2.39
4771 6010 0.837272 GCCCCTAACTGCAGGTATGA 59.163 55.000 19.93 0.00 33.44 2.15
4772 6011 1.421646 GCCCCTAACTGCAGGTATGAT 59.578 52.381 19.93 0.00 33.44 2.45
4773 6012 2.158608 GCCCCTAACTGCAGGTATGATT 60.159 50.000 19.93 4.36 33.44 2.57
4774 6013 3.688414 GCCCCTAACTGCAGGTATGATTT 60.688 47.826 19.93 3.57 33.44 2.17
4775 6014 4.137543 CCCCTAACTGCAGGTATGATTTC 58.862 47.826 19.93 0.00 33.44 2.17
4776 6015 4.385199 CCCCTAACTGCAGGTATGATTTCA 60.385 45.833 19.93 0.00 33.44 2.69
4777 6016 4.818546 CCCTAACTGCAGGTATGATTTCAG 59.181 45.833 19.93 2.50 33.44 3.02
4778 6017 4.274459 CCTAACTGCAGGTATGATTTCAGC 59.726 45.833 19.93 0.00 0.00 4.26
4779 6018 3.354948 ACTGCAGGTATGATTTCAGCA 57.645 42.857 19.93 0.00 0.00 4.41
4780 6019 3.894759 ACTGCAGGTATGATTTCAGCAT 58.105 40.909 19.93 0.00 0.00 3.79
4781 6020 3.630769 ACTGCAGGTATGATTTCAGCATG 59.369 43.478 19.93 0.00 37.54 4.06
4782 6021 3.623703 TGCAGGTATGATTTCAGCATGT 58.376 40.909 0.00 0.00 37.40 3.21
4783 6022 4.779696 TGCAGGTATGATTTCAGCATGTA 58.220 39.130 0.00 0.00 37.40 2.29
4784 6023 4.818005 TGCAGGTATGATTTCAGCATGTAG 59.182 41.667 0.00 0.00 37.40 2.74
4785 6024 5.059161 GCAGGTATGATTTCAGCATGTAGA 58.941 41.667 0.00 0.00 37.40 2.59
4786 6025 5.178996 GCAGGTATGATTTCAGCATGTAGAG 59.821 44.000 0.00 0.00 37.40 2.43
4787 6026 6.519382 CAGGTATGATTTCAGCATGTAGAGA 58.481 40.000 0.00 0.00 37.40 3.10
4788 6027 6.645827 CAGGTATGATTTCAGCATGTAGAGAG 59.354 42.308 0.00 0.00 37.40 3.20
4789 6028 5.931146 GGTATGATTTCAGCATGTAGAGAGG 59.069 44.000 0.00 0.00 37.40 3.69
4790 6029 4.412796 TGATTTCAGCATGTAGAGAGGG 57.587 45.455 0.00 0.00 37.40 4.30
4791 6030 2.698855 TTTCAGCATGTAGAGAGGGC 57.301 50.000 0.00 0.00 37.40 5.19
4792 6031 1.871418 TTCAGCATGTAGAGAGGGCT 58.129 50.000 0.00 0.00 37.40 5.19
4793 6032 2.755952 TCAGCATGTAGAGAGGGCTA 57.244 50.000 0.00 0.00 37.40 3.93
4794 6033 2.311463 TCAGCATGTAGAGAGGGCTAC 58.689 52.381 0.00 0.00 40.85 3.58
4795 6034 2.091610 TCAGCATGTAGAGAGGGCTACT 60.092 50.000 0.00 0.00 41.01 2.57
4796 6035 2.035704 CAGCATGTAGAGAGGGCTACTG 59.964 54.545 0.00 0.00 41.01 2.74
4797 6036 2.091610 AGCATGTAGAGAGGGCTACTGA 60.092 50.000 0.00 0.00 41.01 3.41
4798 6037 2.295909 GCATGTAGAGAGGGCTACTGAG 59.704 54.545 0.00 0.00 41.01 3.35
4799 6038 3.561143 CATGTAGAGAGGGCTACTGAGT 58.439 50.000 0.00 0.00 41.01 3.41
4800 6039 4.720046 CATGTAGAGAGGGCTACTGAGTA 58.280 47.826 0.00 0.00 41.01 2.59
4801 6040 4.153673 TGTAGAGAGGGCTACTGAGTAC 57.846 50.000 0.00 0.00 41.01 2.73
4802 6041 3.781407 TGTAGAGAGGGCTACTGAGTACT 59.219 47.826 0.00 0.00 41.01 2.73
4803 6042 3.290948 AGAGAGGGCTACTGAGTACTG 57.709 52.381 0.00 0.00 0.00 2.74
4804 6043 2.847449 AGAGAGGGCTACTGAGTACTGA 59.153 50.000 0.00 0.00 0.00 3.41
4805 6044 2.946990 GAGAGGGCTACTGAGTACTGAC 59.053 54.545 0.00 0.00 0.00 3.51
4806 6045 1.671845 GAGGGCTACTGAGTACTGACG 59.328 57.143 0.00 0.00 0.00 4.35
4807 6046 1.004511 AGGGCTACTGAGTACTGACGT 59.995 52.381 0.00 0.00 0.00 4.34
4808 6047 1.817447 GGGCTACTGAGTACTGACGTT 59.183 52.381 0.00 0.00 0.00 3.99
4809 6048 2.159407 GGGCTACTGAGTACTGACGTTC 60.159 54.545 0.00 0.00 0.00 3.95
4810 6049 2.748532 GGCTACTGAGTACTGACGTTCT 59.251 50.000 0.00 0.00 0.00 3.01
4811 6050 3.181508 GGCTACTGAGTACTGACGTTCTC 60.182 52.174 0.00 0.00 37.87 2.87
4812 6051 3.181508 GCTACTGAGTACTGACGTTCTCC 60.182 52.174 0.00 0.00 36.91 3.71
4813 6052 3.143211 ACTGAGTACTGACGTTCTCCT 57.857 47.619 0.00 0.00 36.91 3.69
4814 6053 3.075884 ACTGAGTACTGACGTTCTCCTC 58.924 50.000 0.00 0.00 36.91 3.71
4815 6054 3.244630 ACTGAGTACTGACGTTCTCCTCT 60.245 47.826 0.00 0.00 36.91 3.69
4816 6055 3.336468 TGAGTACTGACGTTCTCCTCTC 58.664 50.000 0.00 0.00 36.91 3.20
4817 6056 3.008157 TGAGTACTGACGTTCTCCTCTCT 59.992 47.826 0.00 0.00 36.91 3.10
4818 6057 3.340034 AGTACTGACGTTCTCCTCTCTG 58.660 50.000 0.00 0.00 0.00 3.35
4819 6058 2.570415 ACTGACGTTCTCCTCTCTGA 57.430 50.000 0.00 0.00 0.00 3.27
4820 6059 2.865079 ACTGACGTTCTCCTCTCTGAA 58.135 47.619 0.00 0.00 0.00 3.02
4821 6060 3.223435 ACTGACGTTCTCCTCTCTGAAA 58.777 45.455 0.00 0.00 0.00 2.69
4822 6061 3.254657 ACTGACGTTCTCCTCTCTGAAAG 59.745 47.826 0.00 0.00 0.00 2.62
4823 6062 2.029828 TGACGTTCTCCTCTCTGAAAGC 60.030 50.000 0.00 0.00 0.00 3.51
4824 6063 1.273886 ACGTTCTCCTCTCTGAAAGCC 59.726 52.381 0.00 0.00 0.00 4.35
4825 6064 1.404851 CGTTCTCCTCTCTGAAAGCCC 60.405 57.143 0.00 0.00 0.00 5.19
4826 6065 1.905894 GTTCTCCTCTCTGAAAGCCCT 59.094 52.381 0.00 0.00 0.00 5.19
4827 6066 1.859302 TCTCCTCTCTGAAAGCCCTC 58.141 55.000 0.00 0.00 0.00 4.30
4828 6067 0.829990 CTCCTCTCTGAAAGCCCTCC 59.170 60.000 0.00 0.00 0.00 4.30
4829 6068 0.972983 TCCTCTCTGAAAGCCCTCCG 60.973 60.000 0.00 0.00 0.00 4.63
4830 6069 1.519719 CTCTCTGAAAGCCCTCCGG 59.480 63.158 0.00 0.00 0.00 5.14
4831 6070 1.229209 TCTCTGAAAGCCCTCCGGT 60.229 57.895 0.00 0.00 0.00 5.28
4832 6071 0.836400 TCTCTGAAAGCCCTCCGGTT 60.836 55.000 0.00 0.00 0.00 4.44
4833 6072 0.036875 CTCTGAAAGCCCTCCGGTTT 59.963 55.000 0.00 0.00 44.75 3.27
4834 6073 0.476771 TCTGAAAGCCCTCCGGTTTT 59.523 50.000 0.00 0.00 44.50 2.43
4835 6074 1.133606 TCTGAAAGCCCTCCGGTTTTT 60.134 47.619 0.00 0.00 42.14 1.94
4836 6075 1.000274 CTGAAAGCCCTCCGGTTTTTG 60.000 52.381 0.00 0.00 42.14 2.44
4837 6076 1.037493 GAAAGCCCTCCGGTTTTTGT 58.963 50.000 0.00 0.00 42.14 2.83
4838 6077 1.411246 GAAAGCCCTCCGGTTTTTGTT 59.589 47.619 0.00 0.00 42.14 2.83
4839 6078 1.491668 AAGCCCTCCGGTTTTTGTTT 58.508 45.000 0.00 0.00 0.00 2.83
4840 6079 1.037493 AGCCCTCCGGTTTTTGTTTC 58.963 50.000 0.00 0.00 0.00 2.78
4841 6080 0.747852 GCCCTCCGGTTTTTGTTTCA 59.252 50.000 0.00 0.00 0.00 2.69
4842 6081 1.269569 GCCCTCCGGTTTTTGTTTCAG 60.270 52.381 0.00 0.00 0.00 3.02
4843 6082 1.269569 CCCTCCGGTTTTTGTTTCAGC 60.270 52.381 0.00 0.00 0.00 4.26
4844 6083 1.269569 CCTCCGGTTTTTGTTTCAGCC 60.270 52.381 0.00 0.00 0.00 4.85
4845 6084 1.407258 CTCCGGTTTTTGTTTCAGCCA 59.593 47.619 0.00 0.00 0.00 4.75
4846 6085 1.825474 TCCGGTTTTTGTTTCAGCCAA 59.175 42.857 0.00 0.00 0.00 4.52
4847 6086 2.233922 TCCGGTTTTTGTTTCAGCCAAA 59.766 40.909 0.00 0.00 0.00 3.28
4848 6087 3.003480 CCGGTTTTTGTTTCAGCCAAAA 58.997 40.909 0.00 0.00 39.36 2.44
4849 6088 3.437049 CCGGTTTTTGTTTCAGCCAAAAA 59.563 39.130 6.88 6.88 44.88 1.94
4870 6109 3.895232 ACGCTCCATCAGTGTTTATCT 57.105 42.857 0.00 0.00 43.85 1.98
4871 6110 4.207891 ACGCTCCATCAGTGTTTATCTT 57.792 40.909 0.00 0.00 43.85 2.40
4872 6111 4.579869 ACGCTCCATCAGTGTTTATCTTT 58.420 39.130 0.00 0.00 43.85 2.52
4873 6112 5.730550 ACGCTCCATCAGTGTTTATCTTTA 58.269 37.500 0.00 0.00 43.85 1.85
4874 6113 5.812642 ACGCTCCATCAGTGTTTATCTTTAG 59.187 40.000 0.00 0.00 43.85 1.85
4875 6114 5.277058 CGCTCCATCAGTGTTTATCTTTAGC 60.277 44.000 0.00 0.00 0.00 3.09
4876 6115 5.819901 GCTCCATCAGTGTTTATCTTTAGCT 59.180 40.000 0.00 0.00 0.00 3.32
4877 6116 6.018343 GCTCCATCAGTGTTTATCTTTAGCTC 60.018 42.308 0.00 0.00 0.00 4.09
4878 6117 6.042777 TCCATCAGTGTTTATCTTTAGCTCG 58.957 40.000 0.00 0.00 0.00 5.03
4879 6118 5.812642 CCATCAGTGTTTATCTTTAGCTCGT 59.187 40.000 0.00 0.00 0.00 4.18
4880 6119 6.313905 CCATCAGTGTTTATCTTTAGCTCGTT 59.686 38.462 0.00 0.00 0.00 3.85
4881 6120 6.946229 TCAGTGTTTATCTTTAGCTCGTTC 57.054 37.500 0.00 0.00 0.00 3.95
4882 6121 6.452242 TCAGTGTTTATCTTTAGCTCGTTCA 58.548 36.000 0.00 0.00 0.00 3.18
4883 6122 6.586463 TCAGTGTTTATCTTTAGCTCGTTCAG 59.414 38.462 0.00 0.00 0.00 3.02
4884 6123 6.586463 CAGTGTTTATCTTTAGCTCGTTCAGA 59.414 38.462 0.00 0.00 0.00 3.27
4893 6132 3.432517 CTCGTTCAGAGCTTGGAGG 57.567 57.895 0.00 0.00 40.54 4.30
4894 6133 0.108424 CTCGTTCAGAGCTTGGAGGG 60.108 60.000 0.00 0.00 40.54 4.30
4895 6134 0.832135 TCGTTCAGAGCTTGGAGGGT 60.832 55.000 0.00 0.00 0.00 4.34
4896 6135 0.671781 CGTTCAGAGCTTGGAGGGTG 60.672 60.000 0.00 0.00 0.00 4.61
4897 6136 0.957888 GTTCAGAGCTTGGAGGGTGC 60.958 60.000 0.00 0.00 0.00 5.01
4898 6137 2.045536 CAGAGCTTGGAGGGTGCC 60.046 66.667 0.00 0.00 0.00 5.01
4899 6138 2.530151 AGAGCTTGGAGGGTGCCA 60.530 61.111 0.00 0.00 35.78 4.92
4900 6139 1.927527 AGAGCTTGGAGGGTGCCAT 60.928 57.895 0.00 0.00 37.86 4.40
4901 6140 1.751927 GAGCTTGGAGGGTGCCATG 60.752 63.158 0.00 0.00 37.86 3.66
4903 6142 3.136123 CTTGGAGGGTGCCATGCG 61.136 66.667 0.00 0.00 37.86 4.73
4910 6149 3.807538 GGTGCCATGCGCTCTGTG 61.808 66.667 9.73 2.16 39.23 3.66
4911 6150 4.471726 GTGCCATGCGCTCTGTGC 62.472 66.667 9.73 12.01 39.75 4.57
4912 6151 4.710167 TGCCATGCGCTCTGTGCT 62.710 61.111 9.73 0.00 40.03 4.40
4913 6152 4.175489 GCCATGCGCTCTGTGCTG 62.175 66.667 9.73 0.00 40.03 4.41
4914 6153 4.175489 CCATGCGCTCTGTGCTGC 62.175 66.667 9.73 10.14 40.03 5.25
4915 6154 3.125573 CATGCGCTCTGTGCTGCT 61.126 61.111 9.73 3.85 40.03 4.24
4916 6155 2.359602 ATGCGCTCTGTGCTGCTT 60.360 55.556 9.73 9.26 40.03 3.91
4917 6156 2.687805 ATGCGCTCTGTGCTGCTTG 61.688 57.895 9.73 0.00 40.03 4.01
4918 6157 3.352222 GCGCTCTGTGCTGCTTGT 61.352 61.111 0.00 0.00 40.11 3.16
4919 6158 2.858868 CGCTCTGTGCTGCTTGTC 59.141 61.111 0.00 0.00 40.11 3.18
4920 6159 2.675056 CGCTCTGTGCTGCTTGTCC 61.675 63.158 0.00 0.00 40.11 4.02
4921 6160 1.302351 GCTCTGTGCTGCTTGTCCT 60.302 57.895 0.00 0.00 38.95 3.85
4922 6161 1.575576 GCTCTGTGCTGCTTGTCCTG 61.576 60.000 0.00 0.00 38.95 3.86
4923 6162 0.954449 CTCTGTGCTGCTTGTCCTGG 60.954 60.000 0.00 0.00 0.00 4.45
4924 6163 2.595463 TGTGCTGCTTGTCCTGGC 60.595 61.111 0.00 0.00 0.00 4.85
4925 6164 2.282040 GTGCTGCTTGTCCTGGCT 60.282 61.111 0.00 0.00 0.00 4.75
4926 6165 2.033141 TGCTGCTTGTCCTGGCTC 59.967 61.111 0.00 0.00 0.00 4.70
4927 6166 2.749441 GCTGCTTGTCCTGGCTCC 60.749 66.667 0.00 0.00 0.00 4.70
4928 6167 3.076092 CTGCTTGTCCTGGCTCCT 58.924 61.111 0.00 0.00 0.00 3.69
4929 6168 1.377994 CTGCTTGTCCTGGCTCCTT 59.622 57.895 0.00 0.00 0.00 3.36
4930 6169 0.251077 CTGCTTGTCCTGGCTCCTTT 60.251 55.000 0.00 0.00 0.00 3.11
4931 6170 0.185901 TGCTTGTCCTGGCTCCTTTT 59.814 50.000 0.00 0.00 0.00 2.27
4932 6171 1.332195 GCTTGTCCTGGCTCCTTTTT 58.668 50.000 0.00 0.00 0.00 1.94
4933 6172 1.000171 GCTTGTCCTGGCTCCTTTTTG 60.000 52.381 0.00 0.00 0.00 2.44
4934 6173 1.000171 CTTGTCCTGGCTCCTTTTTGC 60.000 52.381 0.00 0.00 0.00 3.68
4937 6176 1.270826 GTCCTGGCTCCTTTTTGCTTC 59.729 52.381 0.00 0.00 0.00 3.86
4959 6198 4.346129 CAAGAAAGCTTGGTAATGATCGC 58.654 43.478 0.00 0.00 46.13 4.58
4966 6205 2.116827 TGGTAATGATCGCCGGTTTT 57.883 45.000 1.90 0.00 0.00 2.43
4967 6206 1.740585 TGGTAATGATCGCCGGTTTTG 59.259 47.619 1.90 0.00 0.00 2.44
4970 6209 3.366577 GGTAATGATCGCCGGTTTTGTTT 60.367 43.478 1.90 0.00 0.00 2.83
4975 6214 2.649331 TCGCCGGTTTTGTTTCAAAA 57.351 40.000 1.90 3.93 0.00 2.44
4976 6215 2.260481 TCGCCGGTTTTGTTTCAAAAC 58.740 42.857 22.04 22.04 38.90 2.43
4978 6217 1.325037 GCCGGTTTTGTTTCAAAACGG 59.675 47.619 24.77 24.77 41.74 4.44
4979 6218 2.608268 CCGGTTTTGTTTCAAAACGGT 58.392 42.857 27.01 0.00 41.74 4.83
4980 6219 2.345942 CCGGTTTTGTTTCAAAACGGTG 59.654 45.455 27.01 19.83 41.74 4.94
5041 6283 2.941720 CTGATGCTACTTCTTTCAGGCC 59.058 50.000 0.00 0.00 32.14 5.19
5101 6347 1.712081 CGCATTCGGAGCTGAAGTG 59.288 57.895 0.00 0.00 0.00 3.16
5106 6352 0.106708 TTCGGAGCTGAAGTGTGCTT 59.893 50.000 0.00 0.00 39.91 3.91
5117 6363 1.154150 GTGTGCTTGCGAGATTGCC 60.154 57.895 4.70 0.00 0.00 4.52
5166 6412 2.125512 CGCACGAAGGGGGAAGAG 60.126 66.667 0.00 0.00 0.00 2.85
5208 6454 3.382546 AGAAGCACAAGAACAGCAAACAT 59.617 39.130 0.00 0.00 0.00 2.71
5235 6481 3.569701 GCTGAATGTCTTGTGGGAAGAAA 59.430 43.478 0.00 0.00 0.00 2.52
5238 6484 6.071952 GCTGAATGTCTTGTGGGAAGAAAATA 60.072 38.462 0.00 0.00 0.00 1.40
5239 6485 7.523709 GCTGAATGTCTTGTGGGAAGAAAATAA 60.524 37.037 0.00 0.00 0.00 1.40
5240 6486 8.243961 TGAATGTCTTGTGGGAAGAAAATAAA 57.756 30.769 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.322816 TGGTTGGATGAGCCTCTTGC 60.323 55.000 0.00 0.00 41.71 4.01
8 9 1.366319 AGTTGGTTGGATGAGCCTCT 58.634 50.000 0.00 0.00 37.63 3.69
9 10 3.350219 TTAGTTGGTTGGATGAGCCTC 57.650 47.619 0.00 0.00 37.63 4.70
87 95 2.771089 GCAGATGGAGTGTCTTGTGAA 58.229 47.619 0.00 0.00 0.00 3.18
89 97 1.073964 CGCAGATGGAGTGTCTTGTG 58.926 55.000 0.00 0.00 0.00 3.33
90 98 0.671781 GCGCAGATGGAGTGTCTTGT 60.672 55.000 0.30 0.00 0.00 3.16
91 99 0.390866 AGCGCAGATGGAGTGTCTTG 60.391 55.000 11.47 0.00 0.00 3.02
126 138 1.024579 GGAAAAGGAATCGCTCGCCA 61.025 55.000 0.00 0.00 0.00 5.69
239 267 4.028490 GTGGTGGTGGATGGGCGA 62.028 66.667 0.00 0.00 0.00 5.54
370 408 2.280592 GTTGGACTGGGCGTTCGT 60.281 61.111 0.00 0.00 0.00 3.85
371 409 2.027625 GAGTTGGACTGGGCGTTCG 61.028 63.158 0.00 0.00 0.00 3.95
372 410 1.671379 GGAGTTGGACTGGGCGTTC 60.671 63.158 0.00 0.00 0.00 3.95
373 411 1.990160 TTGGAGTTGGACTGGGCGTT 61.990 55.000 0.00 0.00 0.00 4.84
787 1095 2.832201 GGGACGTACCGGAGAGGG 60.832 72.222 9.46 0.00 46.96 4.30
792 1100 2.273449 GAGGAGGGACGTACCGGA 59.727 66.667 12.23 0.00 40.11 5.14
806 1114 4.888325 ATCTGCGGGGGAGGGAGG 62.888 72.222 0.00 0.00 0.00 4.30
828 1156 3.930012 GAAGCGGGGGAGATCCGG 61.930 72.222 0.00 0.00 46.86 5.14
860 1188 2.076622 TATCGGCGCAGAGGAAGCTC 62.077 60.000 16.84 0.00 0.00 4.09
861 1189 2.081425 CTATCGGCGCAGAGGAAGCT 62.081 60.000 16.84 0.00 0.00 3.74
862 1190 1.663074 CTATCGGCGCAGAGGAAGC 60.663 63.158 16.84 0.00 0.00 3.86
863 1191 0.318275 GACTATCGGCGCAGAGGAAG 60.318 60.000 16.84 14.69 0.00 3.46
865 1193 1.448119 CTGACTATCGGCGCAGAGGA 61.448 60.000 16.84 5.59 0.00 3.71
868 1196 1.807142 CTATCTGACTATCGGCGCAGA 59.193 52.381 13.82 13.82 41.14 4.26
870 1198 0.881796 CCTATCTGACTATCGGCGCA 59.118 55.000 10.83 0.00 0.00 6.09
871 1199 0.882474 ACCTATCTGACTATCGGCGC 59.118 55.000 0.00 0.00 0.00 6.53
873 1201 2.490115 CCTCACCTATCTGACTATCGGC 59.510 54.545 0.00 0.00 0.00 5.54
875 1203 4.083749 CGAACCTCACCTATCTGACTATCG 60.084 50.000 0.00 0.00 0.00 2.92
876 1204 4.216687 CCGAACCTCACCTATCTGACTATC 59.783 50.000 0.00 0.00 0.00 2.08
877 1205 4.145807 CCGAACCTCACCTATCTGACTAT 58.854 47.826 0.00 0.00 0.00 2.12
878 1206 3.552875 CCGAACCTCACCTATCTGACTA 58.447 50.000 0.00 0.00 0.00 2.59
879 1207 2.379972 CCGAACCTCACCTATCTGACT 58.620 52.381 0.00 0.00 0.00 3.41
882 1210 0.824109 TGCCGAACCTCACCTATCTG 59.176 55.000 0.00 0.00 0.00 2.90
913 1254 1.003812 CCCCTGGACACAAATTCGGTA 59.996 52.381 0.00 0.00 0.00 4.02
922 1263 2.763215 GCAATCCCCCTGGACACA 59.237 61.111 0.00 0.00 45.58 3.72
924 1265 3.727258 CGGCAATCCCCCTGGACA 61.727 66.667 0.00 0.00 45.58 4.02
930 1271 3.373932 AACATCCCGGCAATCCCCC 62.374 63.158 0.00 0.00 0.00 5.40
936 1288 2.435938 GCTCGAACATCCCGGCAA 60.436 61.111 0.00 0.00 0.00 4.52
955 1308 2.044806 ATCCAATCCTTCCCCGAGCG 62.045 60.000 0.00 0.00 0.00 5.03
958 1311 2.539983 GGATCCAATCCTTCCCCGA 58.460 57.895 6.95 0.00 46.19 5.14
988 1341 3.800833 TGGCATGCCCGATGAGCT 61.801 61.111 33.44 0.00 33.31 4.09
989 1342 3.589881 GTGGCATGCCCGATGAGC 61.590 66.667 33.44 11.01 33.31 4.26
990 1343 3.274586 CGTGGCATGCCCGATGAG 61.275 66.667 33.44 14.10 33.31 2.90
991 1344 4.854924 CCGTGGCATGCCCGATGA 62.855 66.667 34.79 17.53 33.31 2.92
1004 1357 3.891400 CAATGATGGCCGGCCGTG 61.891 66.667 44.28 28.04 39.42 4.94
1099 1460 2.046285 CCGTGGCCAGATCCCAAAC 61.046 63.158 5.11 0.00 33.39 2.93
1220 1583 1.838073 AACACCGCCCGAGATTTCCT 61.838 55.000 0.00 0.00 0.00 3.36
1231 1594 3.050275 GACAGCCTGAACACCGCC 61.050 66.667 0.00 0.00 0.00 6.13
1267 1630 2.151881 TTCCAACGAAAATCGACCGA 57.848 45.000 6.78 0.00 43.74 4.69
1282 1645 4.022068 GCAATCACCAACAGAGAAATTCCA 60.022 41.667 0.00 0.00 0.00 3.53
1286 1649 4.946157 CCTAGCAATCACCAACAGAGAAAT 59.054 41.667 0.00 0.00 0.00 2.17
1314 1685 4.695455 GCACACTCTAAGCATAAACTGGAA 59.305 41.667 0.00 0.00 0.00 3.53
1360 1742 2.348666 CGAATCCCTAACGAAACTGCAG 59.651 50.000 13.48 13.48 0.00 4.41
1369 1751 1.274596 CAACGACCGAATCCCTAACG 58.725 55.000 0.00 0.00 0.00 3.18
1396 1778 0.449388 GTCAAATCTTGAGCAGGGCG 59.551 55.000 0.00 0.00 41.01 6.13
1431 1813 1.206371 ACAGGTTGATACAGGCGGTAC 59.794 52.381 0.00 0.00 34.07 3.34
1526 1931 0.102120 TGCAAGGAAACCAAACGCAG 59.898 50.000 0.00 0.00 0.00 5.18
1530 1935 4.123497 AGAAGTTGCAAGGAAACCAAAC 57.877 40.909 0.00 0.00 0.00 2.93
1678 2225 3.009473 AGGCCTAACTGACATGTTGACAT 59.991 43.478 1.29 0.00 36.96 3.06
1686 2234 2.260822 ACAGACAGGCCTAACTGACAT 58.739 47.619 31.69 15.72 40.97 3.06
1688 2236 3.510360 TCTTACAGACAGGCCTAACTGAC 59.490 47.826 31.69 13.12 40.97 3.51
1698 2246 8.964476 ATACAACCATAAATCTTACAGACAGG 57.036 34.615 0.00 0.00 0.00 4.00
1702 2250 9.967451 TCCAAATACAACCATAAATCTTACAGA 57.033 29.630 0.00 0.00 0.00 3.41
1718 2266 9.699410 AATACATCCTGAAAGATCCAAATACAA 57.301 29.630 0.00 0.00 34.07 2.41
1719 2267 9.699410 AAATACATCCTGAAAGATCCAAATACA 57.301 29.630 0.00 0.00 34.07 2.29
1720 2268 9.956720 CAAATACATCCTGAAAGATCCAAATAC 57.043 33.333 0.00 0.00 34.07 1.89
1721 2269 8.632679 GCAAATACATCCTGAAAGATCCAAATA 58.367 33.333 0.00 0.00 34.07 1.40
1722 2270 7.418254 GGCAAATACATCCTGAAAGATCCAAAT 60.418 37.037 0.00 0.00 34.07 2.32
1723 2271 6.127366 GGCAAATACATCCTGAAAGATCCAAA 60.127 38.462 0.00 0.00 34.07 3.28
1753 2301 7.080724 GCAAATGAGAAGAAGTCCTTAAACTG 58.919 38.462 0.00 0.00 34.68 3.16
1770 2319 2.947652 CCTGTAGGTGATGGCAAATGAG 59.052 50.000 0.00 0.00 0.00 2.90
1823 2372 4.225942 TCAATATCCACAAGTCCAGAAGCT 59.774 41.667 0.00 0.00 0.00 3.74
1843 2392 3.706594 TGGCAACCCTAAACAAATGTCAA 59.293 39.130 0.00 0.00 0.00 3.18
1863 2412 2.859165 ACAGTGATACCACAACCTGG 57.141 50.000 0.00 0.00 45.54 4.45
2059 2608 9.874215 GCTCTATGGAAACGTATAATAAAAACC 57.126 33.333 0.00 0.00 0.00 3.27
2073 2622 8.078596 CCTATAATTTTGCTGCTCTATGGAAAC 58.921 37.037 0.00 0.00 0.00 2.78
2172 2721 5.869753 AATGAGATCTGCACAGTGTTAAC 57.130 39.130 0.00 0.00 0.00 2.01
2203 2752 2.911484 CCATCTAGACTTTCACCTGCC 58.089 52.381 0.00 0.00 0.00 4.85
2261 2810 6.269315 TGCAGTACCAAAATGTAAACAGTTG 58.731 36.000 0.00 0.29 34.14 3.16
2269 2818 6.403092 CGTTCATCATGCAGTACCAAAATGTA 60.403 38.462 0.00 0.00 0.00 2.29
2371 2920 1.266718 CGGTGTCTTGGTCCATTGTTG 59.733 52.381 0.00 0.00 0.00 3.33
2632 3181 4.100529 CAAACAGCAAGACACACTCTTTG 58.899 43.478 0.00 0.00 37.08 2.77
2740 3289 6.516478 GGCAACTTCATCAAACTTTTCTTC 57.484 37.500 0.00 0.00 0.00 2.87
2803 3352 0.830648 CCTCCCAATTCCGCTCTACA 59.169 55.000 0.00 0.00 0.00 2.74
3023 3572 4.682778 AATTGGATTGATGGAATGCTGG 57.317 40.909 0.00 0.00 33.62 4.85
3139 3688 7.776969 AGAAAATCAAGATGCAGAAGGCTATTA 59.223 33.333 0.00 0.00 45.15 0.98
3146 3695 9.298774 GGAAAATAGAAAATCAAGATGCAGAAG 57.701 33.333 0.00 0.00 0.00 2.85
3218 3768 4.341366 TGCATTTCTTCTCACTGAGACA 57.659 40.909 8.35 0.00 38.51 3.41
3310 3860 0.319405 GCAGGCAGCAATTGAAACCT 59.681 50.000 10.34 8.64 44.79 3.50
3403 3953 5.649782 ATGCTACAACAAAGAATTGAGGG 57.350 39.130 0.00 0.00 38.94 4.30
3436 3986 4.387598 CCAGGATCCTAGCATTCAGAAAG 58.612 47.826 15.67 0.00 0.00 2.62
3447 3997 0.769873 AATGGCTGCCAGGATCCTAG 59.230 55.000 27.20 8.71 36.75 3.02
3510 4060 0.524862 GACCAAAGCAGTCCAGCATG 59.475 55.000 0.00 0.00 36.85 4.06
3512 4062 0.535780 CAGACCAAAGCAGTCCAGCA 60.536 55.000 0.00 0.00 34.67 4.41
3567 4117 2.783135 TGGGATGTTGTTTCAGAGCTC 58.217 47.619 5.27 5.27 0.00 4.09
3570 4120 5.063204 TGTACTTGGGATGTTGTTTCAGAG 58.937 41.667 0.00 0.00 0.00 3.35
3670 4900 7.124573 TCATTAGGCTTATGTTTGAGCTCTA 57.875 36.000 16.19 4.09 38.89 2.43
3690 4920 4.147321 AGTCACACTGCCAAGAATTCATT 58.853 39.130 8.44 0.00 0.00 2.57
3700 4930 0.107263 TCAAGCAAGTCACACTGCCA 60.107 50.000 0.00 0.00 0.00 4.92
3740 4970 4.916983 TGTTGCAAAGCTGTTCATAGTT 57.083 36.364 0.00 0.00 0.00 2.24
3741 4971 5.458041 AATGTTGCAAAGCTGTTCATAGT 57.542 34.783 0.00 0.00 0.00 2.12
3800 5030 2.681848 ACTGCATTGATCAGCAAGCTAC 59.318 45.455 10.49 0.00 40.73 3.58
3801 5031 2.995283 ACTGCATTGATCAGCAAGCTA 58.005 42.857 10.49 0.00 40.73 3.32
3807 5037 3.125146 TGTCGTAAACTGCATTGATCAGC 59.875 43.478 0.00 0.00 35.04 4.26
3904 5134 2.174210 CCTGGATGATCTTGGTGTGGAT 59.826 50.000 0.00 0.00 0.00 3.41
3939 5169 2.223618 GGATACTTCGTCCTCTGCTGTC 60.224 54.545 0.00 0.00 32.85 3.51
3969 5199 1.535833 TCAGTCTGAACCTCTCCGTC 58.464 55.000 0.00 0.00 0.00 4.79
4015 5245 1.943730 TTGGGGAAGTGGCCTTGTGT 61.944 55.000 3.32 0.00 0.00 3.72
4083 5313 2.046411 ATGCCGATCACCGCAACA 60.046 55.556 3.51 0.00 36.84 3.33
4160 5390 3.435186 GGAAAGAGGCGCTGCACC 61.435 66.667 7.64 0.00 0.00 5.01
4342 5572 6.096141 ACACATACAAAAGAATGACACCACAA 59.904 34.615 0.00 0.00 0.00 3.33
4464 5694 1.740296 CGACCGATTTTGGCTCCGT 60.740 57.895 0.00 0.00 0.00 4.69
4495 5725 8.651389 AGATATGGCTGCTTTTAAGTATAGACA 58.349 33.333 0.00 0.00 0.00 3.41
4506 5736 5.920193 TTAGCAAAGATATGGCTGCTTTT 57.080 34.783 0.00 0.00 42.37 2.27
4558 5795 2.127383 GCGGTTTCAGTTTCGCCG 60.127 61.111 0.00 0.00 44.60 6.46
4640 5878 6.767524 AGAAAACACTGGTTGATGTTAACA 57.232 33.333 11.41 11.41 38.08 2.41
4652 5890 5.376854 CAAGGATTGGTAGAAAACACTGG 57.623 43.478 0.00 0.00 43.94 4.00
4667 5905 4.906618 TCGCTCCTTCTAAAACAAGGATT 58.093 39.130 1.65 0.00 46.80 3.01
4669 5907 4.345859 TTCGCTCCTTCTAAAACAAGGA 57.654 40.909 1.32 1.32 46.05 3.36
4713 5951 6.541641 CAGCTAGCAGTTTCAAAGGAGATAAT 59.458 38.462 18.83 0.00 0.00 1.28
4715 5953 5.187772 TCAGCTAGCAGTTTCAAAGGAGATA 59.812 40.000 18.83 0.00 0.00 1.98
4717 5956 3.324846 TCAGCTAGCAGTTTCAAAGGAGA 59.675 43.478 18.83 0.00 0.00 3.71
4719 5958 3.071602 AGTCAGCTAGCAGTTTCAAAGGA 59.928 43.478 18.83 0.00 0.00 3.36
4741 5980 1.230017 TTAGGGGCAGTTAGGGGCA 60.230 57.895 0.00 0.00 0.00 5.36
4751 5990 0.546122 CATACCTGCAGTTAGGGGCA 59.454 55.000 13.81 0.00 42.35 5.36
4752 5991 0.837272 TCATACCTGCAGTTAGGGGC 59.163 55.000 13.81 0.00 42.35 5.80
4753 5992 3.864789 AATCATACCTGCAGTTAGGGG 57.135 47.619 13.81 0.00 42.35 4.79
4754 5993 4.780815 TGAAATCATACCTGCAGTTAGGG 58.219 43.478 13.81 0.00 42.35 3.53
4755 5994 4.274459 GCTGAAATCATACCTGCAGTTAGG 59.726 45.833 13.81 4.54 43.71 2.69
4756 5995 4.877823 TGCTGAAATCATACCTGCAGTTAG 59.122 41.667 13.81 0.00 32.41 2.34
4757 5996 4.842574 TGCTGAAATCATACCTGCAGTTA 58.157 39.130 13.81 2.43 32.41 2.24
4758 5997 3.689347 TGCTGAAATCATACCTGCAGTT 58.311 40.909 13.81 0.00 32.41 3.16
4759 5998 3.354948 TGCTGAAATCATACCTGCAGT 57.645 42.857 13.81 3.45 32.41 4.40
4760 5999 3.630769 ACATGCTGAAATCATACCTGCAG 59.369 43.478 6.78 6.78 37.97 4.41
4761 6000 3.623703 ACATGCTGAAATCATACCTGCA 58.376 40.909 0.00 0.00 38.69 4.41
4762 6001 5.059161 TCTACATGCTGAAATCATACCTGC 58.941 41.667 0.00 0.00 0.00 4.85
4763 6002 6.519382 TCTCTACATGCTGAAATCATACCTG 58.481 40.000 0.00 0.00 0.00 4.00
4764 6003 6.239543 CCTCTCTACATGCTGAAATCATACCT 60.240 42.308 0.00 0.00 0.00 3.08
4765 6004 5.931146 CCTCTCTACATGCTGAAATCATACC 59.069 44.000 0.00 0.00 0.00 2.73
4766 6005 5.931146 CCCTCTCTACATGCTGAAATCATAC 59.069 44.000 0.00 0.00 0.00 2.39
4767 6006 5.512060 GCCCTCTCTACATGCTGAAATCATA 60.512 44.000 0.00 0.00 0.00 2.15
4768 6007 4.746089 GCCCTCTCTACATGCTGAAATCAT 60.746 45.833 0.00 0.00 0.00 2.45
4769 6008 3.432749 GCCCTCTCTACATGCTGAAATCA 60.433 47.826 0.00 0.00 0.00 2.57
4770 6009 3.137533 GCCCTCTCTACATGCTGAAATC 58.862 50.000 0.00 0.00 0.00 2.17
4771 6010 2.776536 AGCCCTCTCTACATGCTGAAAT 59.223 45.455 0.00 0.00 0.00 2.17
4772 6011 2.191400 AGCCCTCTCTACATGCTGAAA 58.809 47.619 0.00 0.00 0.00 2.69
4773 6012 1.871418 AGCCCTCTCTACATGCTGAA 58.129 50.000 0.00 0.00 0.00 3.02
4774 6013 2.091610 AGTAGCCCTCTCTACATGCTGA 60.092 50.000 0.00 0.00 40.95 4.26
4775 6014 2.035704 CAGTAGCCCTCTCTACATGCTG 59.964 54.545 0.00 0.00 40.95 4.41
4776 6015 2.091610 TCAGTAGCCCTCTCTACATGCT 60.092 50.000 0.00 0.00 40.95 3.79
4777 6016 2.295909 CTCAGTAGCCCTCTCTACATGC 59.704 54.545 0.00 0.00 40.95 4.06
4778 6017 3.561143 ACTCAGTAGCCCTCTCTACATG 58.439 50.000 0.00 0.00 40.95 3.21
4779 6018 3.963476 ACTCAGTAGCCCTCTCTACAT 57.037 47.619 4.10 0.00 40.95 2.29
4780 6019 3.781407 AGTACTCAGTAGCCCTCTCTACA 59.219 47.826 0.00 0.00 40.95 2.74
4781 6020 4.131596 CAGTACTCAGTAGCCCTCTCTAC 58.868 52.174 0.00 0.00 39.28 2.59
4782 6021 4.038633 TCAGTACTCAGTAGCCCTCTCTA 58.961 47.826 0.00 0.00 0.00 2.43
4783 6022 2.847449 TCAGTACTCAGTAGCCCTCTCT 59.153 50.000 0.00 0.00 0.00 3.10
4784 6023 2.946990 GTCAGTACTCAGTAGCCCTCTC 59.053 54.545 0.00 0.00 0.00 3.20
4785 6024 2.681390 CGTCAGTACTCAGTAGCCCTCT 60.681 54.545 0.00 0.00 0.00 3.69
4786 6025 1.671845 CGTCAGTACTCAGTAGCCCTC 59.328 57.143 0.00 0.00 0.00 4.30
4787 6026 1.004511 ACGTCAGTACTCAGTAGCCCT 59.995 52.381 0.00 0.00 0.00 5.19
4788 6027 1.461559 ACGTCAGTACTCAGTAGCCC 58.538 55.000 0.00 0.00 0.00 5.19
4789 6028 2.748532 AGAACGTCAGTACTCAGTAGCC 59.251 50.000 0.00 0.00 0.00 3.93
4790 6029 3.181508 GGAGAACGTCAGTACTCAGTAGC 60.182 52.174 0.00 0.00 0.00 3.58
4791 6030 4.255301 AGGAGAACGTCAGTACTCAGTAG 58.745 47.826 0.00 0.00 0.00 2.57
4792 6031 4.020396 AGAGGAGAACGTCAGTACTCAGTA 60.020 45.833 0.00 0.00 33.92 2.74
4793 6032 3.075884 GAGGAGAACGTCAGTACTCAGT 58.924 50.000 0.00 0.00 0.00 3.41
4794 6033 3.340034 AGAGGAGAACGTCAGTACTCAG 58.660 50.000 0.00 0.00 33.92 3.35
4795 6034 3.008157 AGAGAGGAGAACGTCAGTACTCA 59.992 47.826 0.00 0.00 33.92 3.41
4796 6035 3.372822 CAGAGAGGAGAACGTCAGTACTC 59.627 52.174 0.00 0.00 33.92 2.59
4797 6036 3.008157 TCAGAGAGGAGAACGTCAGTACT 59.992 47.826 0.00 0.00 33.92 2.73
4798 6037 3.336468 TCAGAGAGGAGAACGTCAGTAC 58.664 50.000 0.00 0.00 33.92 2.73
4799 6038 3.697619 TCAGAGAGGAGAACGTCAGTA 57.302 47.619 0.00 0.00 33.92 2.74
4800 6039 2.570415 TCAGAGAGGAGAACGTCAGT 57.430 50.000 0.00 0.00 33.92 3.41
4801 6040 3.832276 CTTTCAGAGAGGAGAACGTCAG 58.168 50.000 0.00 0.00 33.92 3.51
4802 6041 2.029828 GCTTTCAGAGAGGAGAACGTCA 60.030 50.000 0.00 0.00 33.92 4.35
4803 6042 2.601804 GCTTTCAGAGAGGAGAACGTC 58.398 52.381 0.00 0.00 0.00 4.34
4804 6043 1.273886 GGCTTTCAGAGAGGAGAACGT 59.726 52.381 0.00 0.00 0.00 3.99
4805 6044 1.404851 GGGCTTTCAGAGAGGAGAACG 60.405 57.143 0.00 0.00 0.00 3.95
4806 6045 1.905894 AGGGCTTTCAGAGAGGAGAAC 59.094 52.381 0.00 0.00 0.00 3.01
4807 6046 2.183679 GAGGGCTTTCAGAGAGGAGAA 58.816 52.381 0.00 0.00 0.00 2.87
4808 6047 1.621072 GGAGGGCTTTCAGAGAGGAGA 60.621 57.143 0.00 0.00 0.00 3.71
4809 6048 0.829990 GGAGGGCTTTCAGAGAGGAG 59.170 60.000 0.00 0.00 0.00 3.69
4810 6049 0.972983 CGGAGGGCTTTCAGAGAGGA 60.973 60.000 0.00 0.00 0.00 3.71
4811 6050 1.519719 CGGAGGGCTTTCAGAGAGG 59.480 63.158 0.00 0.00 0.00 3.69
4824 6063 6.709813 TTTGGCTGAAACAAAAACCGGAGG 62.710 45.833 9.46 0.00 43.95 4.30
4825 6064 1.407258 TGGCTGAAACAAAAACCGGAG 59.593 47.619 9.46 0.00 0.00 4.63
4826 6065 1.475403 TGGCTGAAACAAAAACCGGA 58.525 45.000 9.46 0.00 0.00 5.14
4827 6066 2.301577 TTGGCTGAAACAAAAACCGG 57.698 45.000 0.00 0.00 0.00 5.28
4828 6067 4.670227 TTTTTGGCTGAAACAAAAACCG 57.330 36.364 10.85 0.00 46.72 4.44
4846 6085 5.473504 AGATAAACACTGATGGAGCGTTTTT 59.526 36.000 0.00 0.00 32.42 1.94
4847 6086 5.003804 AGATAAACACTGATGGAGCGTTTT 58.996 37.500 0.00 0.00 32.42 2.43
4848 6087 4.579869 AGATAAACACTGATGGAGCGTTT 58.420 39.130 0.00 0.00 34.40 3.60
4849 6088 4.207891 AGATAAACACTGATGGAGCGTT 57.792 40.909 0.00 0.00 0.00 4.84
4850 6089 3.895232 AGATAAACACTGATGGAGCGT 57.105 42.857 0.00 0.00 0.00 5.07
4851 6090 5.277058 GCTAAAGATAAACACTGATGGAGCG 60.277 44.000 0.00 0.00 0.00 5.03
4852 6091 5.819901 AGCTAAAGATAAACACTGATGGAGC 59.180 40.000 0.00 0.00 0.00 4.70
4853 6092 6.199908 CGAGCTAAAGATAAACACTGATGGAG 59.800 42.308 0.00 0.00 0.00 3.86
4854 6093 6.042777 CGAGCTAAAGATAAACACTGATGGA 58.957 40.000 0.00 0.00 0.00 3.41
4855 6094 5.812642 ACGAGCTAAAGATAAACACTGATGG 59.187 40.000 0.00 0.00 0.00 3.51
4856 6095 6.893958 ACGAGCTAAAGATAAACACTGATG 57.106 37.500 0.00 0.00 0.00 3.07
4857 6096 7.097192 TGAACGAGCTAAAGATAAACACTGAT 58.903 34.615 0.00 0.00 0.00 2.90
4858 6097 6.452242 TGAACGAGCTAAAGATAAACACTGA 58.548 36.000 0.00 0.00 0.00 3.41
4859 6098 6.586463 TCTGAACGAGCTAAAGATAAACACTG 59.414 38.462 0.00 0.00 0.00 3.66
4860 6099 6.688578 TCTGAACGAGCTAAAGATAAACACT 58.311 36.000 0.00 0.00 0.00 3.55
4861 6100 6.946229 TCTGAACGAGCTAAAGATAAACAC 57.054 37.500 0.00 0.00 0.00 3.32
4875 6114 0.108424 CCCTCCAAGCTCTGAACGAG 60.108 60.000 0.00 0.00 42.88 4.18
4876 6115 0.832135 ACCCTCCAAGCTCTGAACGA 60.832 55.000 0.00 0.00 0.00 3.85
4877 6116 0.671781 CACCCTCCAAGCTCTGAACG 60.672 60.000 0.00 0.00 0.00 3.95
4878 6117 0.957888 GCACCCTCCAAGCTCTGAAC 60.958 60.000 0.00 0.00 0.00 3.18
4879 6118 1.376466 GCACCCTCCAAGCTCTGAA 59.624 57.895 0.00 0.00 0.00 3.02
4880 6119 2.596851 GGCACCCTCCAAGCTCTGA 61.597 63.158 0.00 0.00 0.00 3.27
4881 6120 2.045536 GGCACCCTCCAAGCTCTG 60.046 66.667 0.00 0.00 0.00 3.35
4882 6121 1.927527 ATGGCACCCTCCAAGCTCT 60.928 57.895 0.00 0.00 39.96 4.09
4883 6122 1.751927 CATGGCACCCTCCAAGCTC 60.752 63.158 0.00 0.00 39.96 4.09
4884 6123 2.357836 CATGGCACCCTCCAAGCT 59.642 61.111 0.00 0.00 39.96 3.74
4885 6124 3.455469 GCATGGCACCCTCCAAGC 61.455 66.667 0.00 0.00 42.52 4.01
4886 6125 3.136123 CGCATGGCACCCTCCAAG 61.136 66.667 0.00 0.00 39.96 3.61
4903 6142 1.302351 AGGACAAGCAGCACAGAGC 60.302 57.895 0.00 0.00 46.19 4.09
4904 6143 0.954449 CCAGGACAAGCAGCACAGAG 60.954 60.000 0.00 0.00 0.00 3.35
4905 6144 1.071987 CCAGGACAAGCAGCACAGA 59.928 57.895 0.00 0.00 0.00 3.41
4906 6145 2.623915 GCCAGGACAAGCAGCACAG 61.624 63.158 0.00 0.00 0.00 3.66
4907 6146 2.595463 GCCAGGACAAGCAGCACA 60.595 61.111 0.00 0.00 0.00 4.57
4908 6147 2.282040 AGCCAGGACAAGCAGCAC 60.282 61.111 0.00 0.00 0.00 4.40
4909 6148 2.033141 GAGCCAGGACAAGCAGCA 59.967 61.111 0.00 0.00 0.00 4.41
4910 6149 2.749441 GGAGCCAGGACAAGCAGC 60.749 66.667 0.00 0.00 0.00 5.25
4911 6150 0.251077 AAAGGAGCCAGGACAAGCAG 60.251 55.000 0.00 0.00 0.00 4.24
4912 6151 0.185901 AAAAGGAGCCAGGACAAGCA 59.814 50.000 0.00 0.00 0.00 3.91
4913 6152 1.000171 CAAAAAGGAGCCAGGACAAGC 60.000 52.381 0.00 0.00 0.00 4.01
4914 6153 1.000171 GCAAAAAGGAGCCAGGACAAG 60.000 52.381 0.00 0.00 0.00 3.16
4915 6154 1.039856 GCAAAAAGGAGCCAGGACAA 58.960 50.000 0.00 0.00 0.00 3.18
4916 6155 0.185901 AGCAAAAAGGAGCCAGGACA 59.814 50.000 0.00 0.00 0.00 4.02
4917 6156 1.270826 GAAGCAAAAAGGAGCCAGGAC 59.729 52.381 0.00 0.00 0.00 3.85
4918 6157 1.133513 TGAAGCAAAAAGGAGCCAGGA 60.134 47.619 0.00 0.00 0.00 3.86
4919 6158 1.331214 TGAAGCAAAAAGGAGCCAGG 58.669 50.000 0.00 0.00 0.00 4.45
4920 6159 2.624838 TCTTGAAGCAAAAAGGAGCCAG 59.375 45.455 0.00 0.00 0.00 4.85
4921 6160 2.665165 TCTTGAAGCAAAAAGGAGCCA 58.335 42.857 0.00 0.00 0.00 4.75
4922 6161 3.733443 TTCTTGAAGCAAAAAGGAGCC 57.267 42.857 0.00 0.00 0.00 4.70
4951 6190 2.294791 TGAAACAAAACCGGCGATCATT 59.705 40.909 9.30 0.00 0.00 2.57
4959 6198 2.345942 CACCGTTTTGAAACAAAACCGG 59.654 45.455 27.30 27.30 38.81 5.28
4966 6205 5.354513 TCTTACATCACACCGTTTTGAAACA 59.645 36.000 7.32 0.00 38.81 2.83
4967 6206 5.679792 GTCTTACATCACACCGTTTTGAAAC 59.320 40.000 0.00 0.00 35.59 2.78
4970 6209 4.443621 TGTCTTACATCACACCGTTTTGA 58.556 39.130 0.00 0.00 0.00 2.69
5101 6347 1.136147 CAGGCAATCTCGCAAGCAC 59.864 57.895 0.00 0.00 37.18 4.40
5106 6352 0.391661 GAGGAACAGGCAATCTCGCA 60.392 55.000 0.00 0.00 0.00 5.10
5117 6363 0.387367 CGACCTGTGACGAGGAACAG 60.387 60.000 7.84 0.00 42.83 3.16
5166 6412 0.326264 ACCACCAGACCAGATTGCTC 59.674 55.000 0.00 0.00 0.00 4.26
5208 6454 3.010027 TCCCACAAGACATTCAGCCAATA 59.990 43.478 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.