Multiple sequence alignment - TraesCS1B01G333300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G333300 chr1B 100.000 7134 0 0 551 7684 559962007 559969140 0.000000e+00 13175.0
1 TraesCS1B01G333300 chr1B 100.000 266 0 0 7926 8191 559969382 559969647 7.390000e-135 492.0
2 TraesCS1B01G333300 chr1B 100.000 255 0 0 1 255 559961457 559961711 9.620000e-129 472.0
3 TraesCS1B01G333300 chr1B 90.984 122 11 0 8070 8191 92322432 92322553 1.830000e-36 165.0
4 TraesCS1B01G333300 chr1D 90.802 2805 162 29 4895 7636 414506784 414509555 0.000000e+00 3663.0
5 TraesCS1B01G333300 chr1D 90.358 2572 127 56 555 3089 414502369 414504856 0.000000e+00 3264.0
6 TraesCS1B01G333300 chr1D 87.276 558 35 14 3066 3601 414504800 414505343 9.090000e-169 604.0
7 TraesCS1B01G333300 chr1D 81.481 729 77 37 3628 4344 414505339 414506021 5.590000e-151 545.0
8 TraesCS1B01G333300 chr1D 82.308 260 19 10 4536 4783 414506429 414506673 5.010000e-47 200.0
9 TraesCS1B01G333300 chr1D 94.545 55 3 0 4403 4457 414506083 414506137 1.460000e-12 86.1
10 TraesCS1B01G333300 chr1A 87.377 3264 240 74 4501 7684 511408011 511411182 0.000000e+00 3587.0
11 TraesCS1B01G333300 chr1A 91.187 2451 123 36 554 2950 511404058 511406469 0.000000e+00 3243.0
12 TraesCS1B01G333300 chr1A 83.302 527 41 22 3095 3590 511406609 511407119 7.540000e-120 442.0
13 TraesCS1B01G333300 chr1A 84.985 333 24 11 4148 4459 511407490 511407817 1.720000e-81 315.0
14 TraesCS1B01G333300 chr1A 82.869 251 13 17 3748 3980 511407213 511407451 1.800000e-46 198.0
15 TraesCS1B01G333300 chr1A 80.342 117 11 3 2969 3085 511406531 511406635 2.450000e-10 78.7
16 TraesCS1B01G333300 chr4D 89.599 673 58 5 981 1652 289299630 289300291 0.000000e+00 845.0
17 TraesCS1B01G333300 chr3B 77.511 707 139 17 1056 1755 562454658 562453965 2.750000e-109 407.0
18 TraesCS1B01G333300 chr3B 79.029 515 88 15 1810 2311 562453819 562453312 1.320000e-87 335.0
19 TraesCS1B01G333300 chr3B 73.467 799 182 20 5853 6638 562449561 562448780 2.910000e-69 274.0
20 TraesCS1B01G333300 chr3B 84.211 95 15 0 2217 2311 795547923 795548017 8.750000e-15 93.5
21 TraesCS1B01G333300 chr7B 92.537 268 17 3 7926 8191 395615359 395615625 1.670000e-101 381.0
22 TraesCS1B01G333300 chr3A 80.000 515 83 15 1810 2311 568160821 568160314 6.040000e-96 363.0
23 TraesCS1B01G333300 chr3D 78.682 516 88 17 1810 2311 430157977 430157470 2.850000e-84 324.0
24 TraesCS1B01G333300 chr3D 73.935 798 180 22 5853 6638 430151918 430151137 6.220000e-76 296.0
25 TraesCS1B01G333300 chr4A 86.179 123 17 0 8069 8191 212619374 212619496 5.160000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G333300 chr1B 559961457 559969647 8190 False 4713.000000 13175 100.000000 1 8191 3 chr1B.!!$F2 8190
1 TraesCS1B01G333300 chr1D 414502369 414509555 7186 False 1393.683333 3663 87.795000 555 7636 6 chr1D.!!$F1 7081
2 TraesCS1B01G333300 chr1A 511404058 511411182 7124 False 1310.616667 3587 85.010333 554 7684 6 chr1A.!!$F1 7130
3 TraesCS1B01G333300 chr4D 289299630 289300291 661 False 845.000000 845 89.599000 981 1652 1 chr4D.!!$F1 671
4 TraesCS1B01G333300 chr3B 562448780 562454658 5878 True 338.666667 407 76.669000 1056 6638 3 chr3B.!!$R1 5582
5 TraesCS1B01G333300 chr3A 568160314 568160821 507 True 363.000000 363 80.000000 1810 2311 1 chr3A.!!$R1 501
6 TraesCS1B01G333300 chr3D 430157470 430157977 507 True 324.000000 324 78.682000 1810 2311 1 chr3D.!!$R2 501
7 TraesCS1B01G333300 chr3D 430151137 430151918 781 True 296.000000 296 73.935000 5853 6638 1 chr3D.!!$R1 785

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
29 30 0.034896 GACTGAAGGCGGAGTTGGAA 59.965 55.0 0.00 0.0 0.00 3.53 F
169 170 0.038744 AATGGCGATGGGATGGGATC 59.961 55.0 0.00 0.0 0.00 3.36 F
199 200 0.099791 ACGACCAACAACCGCAAAAG 59.900 50.0 0.00 0.0 0.00 2.27 F
201 202 0.102300 GACCAACAACCGCAAAAGCT 59.898 50.0 0.00 0.0 0.00 3.74 F
593 594 0.534203 CGGTGTTGCCAGTACCAACT 60.534 55.0 12.68 0.0 42.25 3.16 F
2277 2403 0.745845 CCAACTTCGGCCAGGATCTG 60.746 60.0 2.24 0.0 0.00 2.90 F
3016 5245 0.035056 AGGGGAGGAAAGTTGATGCG 60.035 55.0 0.00 0.0 0.00 4.73 F
3862 6133 0.031314 CAGCGCGATCATACACTCCT 59.969 55.0 12.10 0.0 0.00 3.69 F
4109 6406 0.033366 GCAACGGCCAAGTCCAATTT 59.967 50.0 2.24 0.0 0.00 1.82 F
5628 8536 0.036732 TAGCAGAAGCCACACAAGGG 59.963 55.0 0.00 0.0 43.56 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1726 1752 0.539051 CTGTAGCTCACCTCCTTGGG 59.461 60.000 0.00 0.00 41.11 4.12 R
2058 2178 3.120385 TGCGCCATCAGCACGAAG 61.120 61.111 4.18 0.00 44.04 3.79 R
2398 2524 6.060136 AGAACCATCATGAGTAATCACATGG 58.940 40.000 22.66 22.66 40.97 3.66 R
2477 2623 1.463674 AAGTTTTAGATGCCAGCCCG 58.536 50.000 0.00 0.00 0.00 6.13 R
2519 2998 1.747355 GCACTCTGCACATGCCTAAAT 59.253 47.619 0.49 0.00 44.26 1.40 R
3501 5754 0.110486 ACCAACTGTACCCCTTGCAG 59.890 55.000 0.00 0.00 43.34 4.41 R
4396 6725 0.387878 GACAGAGACACAGAGTGCCG 60.388 60.000 0.00 0.00 36.98 5.69 R
5664 8572 0.175073 GTACCTTGTAGACTGGCCCG 59.825 60.000 0.00 0.00 0.00 6.13 R
5722 8632 1.349688 ACCTGAAGTTGCGATTACCCA 59.650 47.619 0.00 0.00 0.00 4.51 R
7574 10591 1.338484 TGATGCTCTTCACTGGTCAGC 60.338 52.381 0.00 0.00 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.840831 TGCTGGAATCGACTGAAGG 57.159 52.632 0.00 0.00 0.00 3.46
19 20 0.391661 TGCTGGAATCGACTGAAGGC 60.392 55.000 0.00 0.00 0.00 4.35
20 21 1.424493 GCTGGAATCGACTGAAGGCG 61.424 60.000 0.00 0.00 0.00 5.52
21 22 0.807667 CTGGAATCGACTGAAGGCGG 60.808 60.000 5.60 0.00 0.00 6.13
22 23 1.254975 TGGAATCGACTGAAGGCGGA 61.255 55.000 5.60 0.00 0.00 5.54
23 24 0.528684 GGAATCGACTGAAGGCGGAG 60.529 60.000 5.60 0.00 0.00 4.63
24 25 0.173708 GAATCGACTGAAGGCGGAGT 59.826 55.000 5.60 0.00 0.00 3.85
25 26 0.608640 AATCGACTGAAGGCGGAGTT 59.391 50.000 5.60 0.00 0.00 3.01
26 27 0.108615 ATCGACTGAAGGCGGAGTTG 60.109 55.000 5.60 0.00 0.00 3.16
27 28 1.738099 CGACTGAAGGCGGAGTTGG 60.738 63.158 0.00 0.00 0.00 3.77
28 29 1.671742 GACTGAAGGCGGAGTTGGA 59.328 57.895 0.00 0.00 0.00 3.53
29 30 0.034896 GACTGAAGGCGGAGTTGGAA 59.965 55.000 0.00 0.00 0.00 3.53
30 31 0.250338 ACTGAAGGCGGAGTTGGAAC 60.250 55.000 0.00 0.00 0.00 3.62
31 32 0.955919 CTGAAGGCGGAGTTGGAACC 60.956 60.000 0.00 0.00 0.00 3.62
32 33 1.072505 GAAGGCGGAGTTGGAACCA 59.927 57.895 0.00 0.00 0.00 3.67
33 34 0.536460 GAAGGCGGAGTTGGAACCAA 60.536 55.000 1.83 1.83 0.00 3.67
42 43 3.605946 TTGGAACCAACACCTGCTT 57.394 47.368 1.83 0.00 0.00 3.91
43 44 1.859302 TTGGAACCAACACCTGCTTT 58.141 45.000 1.83 0.00 0.00 3.51
44 45 1.859302 TGGAACCAACACCTGCTTTT 58.141 45.000 0.00 0.00 0.00 2.27
45 46 1.480137 TGGAACCAACACCTGCTTTTG 59.520 47.619 0.00 0.00 0.00 2.44
46 47 1.480545 GGAACCAACACCTGCTTTTGT 59.519 47.619 0.00 0.00 0.00 2.83
47 48 2.093711 GGAACCAACACCTGCTTTTGTT 60.094 45.455 0.00 0.00 36.35 2.83
50 51 2.007360 CAACACCTGCTTTTGTTGCA 57.993 45.000 10.56 0.00 44.42 4.08
51 52 2.344950 CAACACCTGCTTTTGTTGCAA 58.655 42.857 0.00 0.00 44.42 4.08
52 53 2.298411 ACACCTGCTTTTGTTGCAAG 57.702 45.000 0.00 0.00 40.13 4.01
53 54 1.134729 ACACCTGCTTTTGTTGCAAGG 60.135 47.619 0.00 0.00 40.13 3.61
54 55 1.136695 CACCTGCTTTTGTTGCAAGGA 59.863 47.619 0.00 0.00 40.13 3.36
55 56 2.041701 ACCTGCTTTTGTTGCAAGGAT 58.958 42.857 0.00 0.00 40.13 3.24
56 57 2.435437 ACCTGCTTTTGTTGCAAGGATT 59.565 40.909 0.00 0.00 40.13 3.01
69 70 3.559238 CAAGGATTGGAGTGTTTTCGG 57.441 47.619 0.00 0.00 43.94 4.30
70 71 1.534729 AGGATTGGAGTGTTTTCGGC 58.465 50.000 0.00 0.00 0.00 5.54
71 72 0.168128 GGATTGGAGTGTTTTCGGCG 59.832 55.000 0.00 0.00 0.00 6.46
72 73 0.168128 GATTGGAGTGTTTTCGGCGG 59.832 55.000 7.21 0.00 0.00 6.13
73 74 1.862602 ATTGGAGTGTTTTCGGCGGC 61.863 55.000 7.21 0.00 0.00 6.53
74 75 4.084888 GGAGTGTTTTCGGCGGCG 62.085 66.667 27.15 27.15 0.00 6.46
75 76 4.084888 GAGTGTTTTCGGCGGCGG 62.085 66.667 31.73 13.01 0.00 6.13
76 77 4.922026 AGTGTTTTCGGCGGCGGT 62.922 61.111 31.73 4.66 0.00 5.68
77 78 4.676586 GTGTTTTCGGCGGCGGTG 62.677 66.667 31.73 3.36 0.00 4.94
78 79 4.912485 TGTTTTCGGCGGCGGTGA 62.912 61.111 31.73 14.91 0.00 4.02
79 80 3.428282 GTTTTCGGCGGCGGTGAT 61.428 61.111 31.73 0.00 0.00 3.06
80 81 3.427425 TTTTCGGCGGCGGTGATG 61.427 61.111 31.73 1.64 0.00 3.07
87 88 3.369400 CGGCGGTGATGGGCAAAA 61.369 61.111 0.00 0.00 0.00 2.44
88 89 2.925262 CGGCGGTGATGGGCAAAAA 61.925 57.895 0.00 0.00 0.00 1.94
120 121 4.504132 GCAAACGGCAACCACAAA 57.496 50.000 0.00 0.00 43.97 2.83
121 122 2.755929 GCAAACGGCAACCACAAAA 58.244 47.368 0.00 0.00 43.97 2.44
122 123 0.649993 GCAAACGGCAACCACAAAAG 59.350 50.000 0.00 0.00 43.97 2.27
123 124 0.649993 CAAACGGCAACCACAAAAGC 59.350 50.000 0.00 0.00 0.00 3.51
124 125 0.534873 AAACGGCAACCACAAAAGCT 59.465 45.000 0.00 0.00 0.00 3.74
125 126 1.394618 AACGGCAACCACAAAAGCTA 58.605 45.000 0.00 0.00 0.00 3.32
126 127 0.666374 ACGGCAACCACAAAAGCTAC 59.334 50.000 0.00 0.00 0.00 3.58
127 128 0.951558 CGGCAACCACAAAAGCTACT 59.048 50.000 0.00 0.00 0.00 2.57
128 129 1.334960 CGGCAACCACAAAAGCTACTG 60.335 52.381 0.00 0.00 0.00 2.74
129 130 1.602920 GGCAACCACAAAAGCTACTGC 60.603 52.381 0.00 0.00 40.05 4.40
130 131 1.602920 GCAACCACAAAAGCTACTGCC 60.603 52.381 0.00 0.00 40.80 4.85
131 132 0.951558 AACCACAAAAGCTACTGCCG 59.048 50.000 0.00 0.00 40.80 5.69
132 133 0.889186 ACCACAAAAGCTACTGCCGG 60.889 55.000 0.00 0.00 40.80 6.13
133 134 0.889186 CCACAAAAGCTACTGCCGGT 60.889 55.000 1.90 0.00 40.80 5.28
134 135 0.238289 CACAAAAGCTACTGCCGGTG 59.762 55.000 1.90 0.00 40.80 4.94
135 136 0.107831 ACAAAAGCTACTGCCGGTGA 59.892 50.000 1.90 0.00 40.80 4.02
136 137 0.798776 CAAAAGCTACTGCCGGTGAG 59.201 55.000 1.90 1.59 40.80 3.51
137 138 0.396811 AAAAGCTACTGCCGGTGAGT 59.603 50.000 1.90 8.49 40.80 3.41
138 139 0.396811 AAAGCTACTGCCGGTGAGTT 59.603 50.000 12.77 0.00 40.80 3.01
139 140 0.396811 AAGCTACTGCCGGTGAGTTT 59.603 50.000 12.77 2.63 40.80 2.66
140 141 0.396811 AGCTACTGCCGGTGAGTTTT 59.603 50.000 12.77 0.00 40.80 2.43
141 142 1.202770 AGCTACTGCCGGTGAGTTTTT 60.203 47.619 12.77 0.00 40.80 1.94
160 161 4.374843 TTTTCTTCATCAATGGCGATGG 57.625 40.909 0.00 0.00 42.58 3.51
161 162 1.971481 TCTTCATCAATGGCGATGGG 58.029 50.000 0.00 0.00 42.58 4.00
162 163 1.490069 TCTTCATCAATGGCGATGGGA 59.510 47.619 0.00 0.00 42.58 4.37
163 164 2.107031 TCTTCATCAATGGCGATGGGAT 59.893 45.455 0.00 0.00 42.58 3.85
164 165 1.900245 TCATCAATGGCGATGGGATG 58.100 50.000 13.91 13.91 42.58 3.51
165 166 0.885879 CATCAATGGCGATGGGATGG 59.114 55.000 12.84 0.21 39.33 3.51
166 167 0.251474 ATCAATGGCGATGGGATGGG 60.251 55.000 0.00 0.00 0.00 4.00
167 168 1.151221 CAATGGCGATGGGATGGGA 59.849 57.895 0.00 0.00 0.00 4.37
168 169 0.251474 CAATGGCGATGGGATGGGAT 60.251 55.000 0.00 0.00 0.00 3.85
169 170 0.038744 AATGGCGATGGGATGGGATC 59.961 55.000 0.00 0.00 0.00 3.36
182 183 3.815401 GGATGGGATCCTGAATTGTTACG 59.185 47.826 12.58 0.00 46.19 3.18
183 184 4.444306 GGATGGGATCCTGAATTGTTACGA 60.444 45.833 12.58 0.00 46.19 3.43
184 185 3.869065 TGGGATCCTGAATTGTTACGAC 58.131 45.455 12.58 0.00 0.00 4.34
185 186 3.203716 GGGATCCTGAATTGTTACGACC 58.796 50.000 12.58 0.00 0.00 4.79
186 187 3.370103 GGGATCCTGAATTGTTACGACCA 60.370 47.826 12.58 0.00 0.00 4.02
187 188 4.258543 GGATCCTGAATTGTTACGACCAA 58.741 43.478 3.84 0.00 0.00 3.67
188 189 4.094442 GGATCCTGAATTGTTACGACCAAC 59.906 45.833 3.84 0.00 0.00 3.77
189 190 4.074627 TCCTGAATTGTTACGACCAACA 57.925 40.909 0.00 0.00 36.65 3.33
194 195 0.656785 TTGTTACGACCAACAACCGC 59.343 50.000 9.53 0.00 42.08 5.68
195 196 0.461516 TGTTACGACCAACAACCGCA 60.462 50.000 0.00 0.00 35.53 5.69
196 197 0.656785 GTTACGACCAACAACCGCAA 59.343 50.000 0.00 0.00 0.00 4.85
197 198 1.063764 GTTACGACCAACAACCGCAAA 59.936 47.619 0.00 0.00 0.00 3.68
198 199 1.376543 TACGACCAACAACCGCAAAA 58.623 45.000 0.00 0.00 0.00 2.44
199 200 0.099791 ACGACCAACAACCGCAAAAG 59.900 50.000 0.00 0.00 0.00 2.27
200 201 1.206115 CGACCAACAACCGCAAAAGC 61.206 55.000 0.00 0.00 0.00 3.51
201 202 0.102300 GACCAACAACCGCAAAAGCT 59.898 50.000 0.00 0.00 0.00 3.74
202 203 1.335496 GACCAACAACCGCAAAAGCTA 59.665 47.619 0.00 0.00 0.00 3.32
203 204 1.066454 ACCAACAACCGCAAAAGCTAC 59.934 47.619 0.00 0.00 0.00 3.58
204 205 1.336755 CCAACAACCGCAAAAGCTACT 59.663 47.619 0.00 0.00 0.00 2.57
205 206 2.550606 CCAACAACCGCAAAAGCTACTA 59.449 45.455 0.00 0.00 0.00 1.82
206 207 3.551551 CAACAACCGCAAAAGCTACTAC 58.448 45.455 0.00 0.00 0.00 2.73
207 208 1.796459 ACAACCGCAAAAGCTACTACG 59.204 47.619 0.00 0.00 0.00 3.51
208 209 1.127951 CAACCGCAAAAGCTACTACGG 59.872 52.381 14.47 14.47 45.86 4.02
209 210 0.604578 ACCGCAAAAGCTACTACGGA 59.395 50.000 20.82 0.00 43.19 4.69
210 211 0.997196 CCGCAAAAGCTACTACGGAC 59.003 55.000 11.53 0.00 43.19 4.79
211 212 0.638746 CGCAAAAGCTACTACGGACG 59.361 55.000 0.00 0.00 0.00 4.79
212 213 1.730121 CGCAAAAGCTACTACGGACGA 60.730 52.381 0.00 0.00 0.00 4.20
213 214 2.537401 GCAAAAGCTACTACGGACGAT 58.463 47.619 0.00 0.00 0.00 3.73
214 215 2.928116 GCAAAAGCTACTACGGACGATT 59.072 45.455 0.00 0.00 0.00 3.34
215 216 3.370061 GCAAAAGCTACTACGGACGATTT 59.630 43.478 0.00 0.00 0.00 2.17
216 217 4.142966 GCAAAAGCTACTACGGACGATTTT 60.143 41.667 0.00 0.00 0.00 1.82
217 218 5.616204 GCAAAAGCTACTACGGACGATTTTT 60.616 40.000 0.00 0.00 0.00 1.94
237 238 2.437200 TTTTTGCTTCAATGGCGAGG 57.563 45.000 0.00 0.00 0.00 4.63
238 239 0.602562 TTTTGCTTCAATGGCGAGGG 59.397 50.000 0.00 0.00 0.00 4.30
239 240 1.250154 TTTGCTTCAATGGCGAGGGG 61.250 55.000 0.00 0.00 0.00 4.79
240 241 3.521796 GCTTCAATGGCGAGGGGC 61.522 66.667 0.00 0.00 42.51 5.80
241 242 3.204827 CTTCAATGGCGAGGGGCG 61.205 66.667 0.00 0.00 44.92 6.13
242 243 4.794648 TTCAATGGCGAGGGGCGG 62.795 66.667 0.00 0.00 44.92 6.13
244 245 4.794648 CAATGGCGAGGGGCGGAA 62.795 66.667 0.00 0.00 44.92 4.30
245 246 4.489771 AATGGCGAGGGGCGGAAG 62.490 66.667 0.00 0.00 44.92 3.46
248 249 4.525949 GGCGAGGGGCGGAAGTAC 62.526 72.222 0.00 0.00 44.92 2.73
249 250 4.525949 GCGAGGGGCGGAAGTACC 62.526 72.222 0.00 0.00 41.29 3.34
590 591 2.281208 GCGGTGTTGCCAGTACCA 60.281 61.111 0.00 0.00 36.97 3.25
591 592 1.894756 GCGGTGTTGCCAGTACCAA 60.895 57.895 0.00 0.00 36.97 3.67
593 594 0.534203 CGGTGTTGCCAGTACCAACT 60.534 55.000 12.68 0.00 42.25 3.16
594 595 1.270412 CGGTGTTGCCAGTACCAACTA 60.270 52.381 12.68 0.61 42.25 2.24
595 596 2.148768 GGTGTTGCCAGTACCAACTAC 58.851 52.381 12.68 9.59 42.25 2.73
600 610 4.131596 GTTGCCAGTACCAACTACAAGAA 58.868 43.478 6.31 0.00 39.47 2.52
604 614 4.742743 GCCAGTACCAACTACAAGAACTGT 60.743 45.833 0.00 0.00 42.47 3.55
624 634 2.194056 CGAGGGGTAGGGTCGCTA 59.806 66.667 0.00 0.00 0.00 4.26
628 638 1.837499 GGGGTAGGGTCGCTATGCT 60.837 63.158 0.00 0.00 0.00 3.79
629 640 1.666580 GGGTAGGGTCGCTATGCTC 59.333 63.158 0.00 0.00 0.00 4.26
633 644 4.301027 GGGTCGCTATGCTCGGGG 62.301 72.222 0.00 0.00 0.00 5.73
634 645 3.224324 GGTCGCTATGCTCGGGGA 61.224 66.667 0.00 0.00 0.00 4.81
636 647 2.912542 TCGCTATGCTCGGGGAGG 60.913 66.667 0.00 0.00 0.00 4.30
638 649 3.631046 GCTATGCTCGGGGAGGGG 61.631 72.222 0.00 0.00 0.00 4.79
639 650 2.925170 CTATGCTCGGGGAGGGGG 60.925 72.222 0.00 0.00 0.00 5.40
658 669 3.869272 GGCGACGCAATGCAGAGG 61.869 66.667 23.09 0.00 0.00 3.69
659 670 2.815211 GCGACGCAATGCAGAGGA 60.815 61.111 16.42 0.00 0.00 3.71
660 671 2.176273 GCGACGCAATGCAGAGGAT 61.176 57.895 16.42 0.00 0.00 3.24
661 672 0.875908 GCGACGCAATGCAGAGGATA 60.876 55.000 16.42 0.00 0.00 2.59
687 700 1.766496 TGGCTATTTACGGGAGGAAGG 59.234 52.381 0.00 0.00 31.76 3.46
689 702 1.872653 GCTATTTACGGGAGGAAGGCG 60.873 57.143 0.00 0.00 31.76 5.52
707 720 1.404391 GCGATGGTAGAAGGAAGACGA 59.596 52.381 0.00 0.00 0.00 4.20
710 723 2.599408 TGGTAGAAGGAAGACGACCT 57.401 50.000 0.00 0.00 39.69 3.85
724 742 2.885894 GACGACCTCGAGGGATCTAATT 59.114 50.000 34.04 11.68 43.02 1.40
725 743 4.070716 GACGACCTCGAGGGATCTAATTA 58.929 47.826 34.04 0.00 43.02 1.40
726 744 4.664392 ACGACCTCGAGGGATCTAATTAT 58.336 43.478 34.04 10.09 43.02 1.28
732 750 9.575868 GACCTCGAGGGATCTAATTATATATGA 57.424 37.037 34.04 0.00 40.27 2.15
771 790 2.515996 GATCGAACGGTTGGGAGGCA 62.516 60.000 0.00 0.00 0.00 4.75
931 952 6.128007 CCGTATAACAAACCAGAAAGATGCTT 60.128 38.462 0.00 0.00 0.00 3.91
1065 1090 2.492090 CTCTCGTCGGCTTCCCAG 59.508 66.667 0.00 0.00 0.00 4.45
1726 1752 2.157738 ACTTCAGCTTCATCAACAGCC 58.842 47.619 0.00 0.00 36.62 4.85
1899 2019 3.112075 CAGTGCGACGCCGTGAAT 61.112 61.111 18.69 0.00 38.24 2.57
2274 2400 2.677228 CCCAACTTCGGCCAGGAT 59.323 61.111 2.24 0.00 0.00 3.24
2277 2403 0.745845 CCAACTTCGGCCAGGATCTG 60.746 60.000 2.24 0.00 0.00 2.90
2351 2477 3.179599 CGTTCCGTTTGCACTCATTTTTC 59.820 43.478 0.00 0.00 0.00 2.29
2607 3286 5.171476 GCAGAACTAGATCTTGCACAGTTA 58.829 41.667 10.74 0.00 29.89 2.24
2627 3306 1.276622 TTTAGTCAGTGAGGGGCCTC 58.723 55.000 0.84 0.00 43.01 4.70
2645 3324 3.494398 GCCTCACTCCACTGTTCTGTTTA 60.494 47.826 0.00 0.00 0.00 2.01
2669 3348 3.902150 GTGAAAGCCACTTTTTAGGAGC 58.098 45.455 0.00 0.00 42.44 4.70
2838 5022 6.982724 GTGATCATCAAATCCTGAAAAATCCC 59.017 38.462 0.00 0.00 37.67 3.85
2842 5026 7.642186 TCATCAAATCCTGAAAAATCCCTCTA 58.358 34.615 0.00 0.00 37.67 2.43
2863 5047 6.500041 TCTACAAACAAAGCAACCATTACAC 58.500 36.000 0.00 0.00 0.00 2.90
2866 5050 6.810911 ACAAACAAAGCAACCATTACACATA 58.189 32.000 0.00 0.00 0.00 2.29
2867 5051 6.699642 ACAAACAAAGCAACCATTACACATAC 59.300 34.615 0.00 0.00 0.00 2.39
2904 5088 5.534914 TTGAGGGCATGGGCTAATATAAT 57.465 39.130 0.00 0.00 40.87 1.28
2915 5100 5.547666 TGGGCTAATATAATCCTTGCTCTGA 59.452 40.000 0.00 0.00 0.00 3.27
2918 5103 6.478344 GGCTAATATAATCCTTGCTCTGATCG 59.522 42.308 0.00 0.00 0.00 3.69
2919 5104 7.261325 GCTAATATAATCCTTGCTCTGATCGA 58.739 38.462 0.00 0.00 0.00 3.59
2920 5105 7.434897 GCTAATATAATCCTTGCTCTGATCGAG 59.565 40.741 9.37 9.37 42.88 4.04
2934 5119 6.883558 CTCTGATCGAGGAGGAAACGTAAGT 61.884 48.000 0.00 0.00 44.83 2.24
2954 5140 7.201444 CGTAAGTTTGAAGACACCATACAGATC 60.201 40.741 0.00 0.00 0.00 2.75
2960 5146 6.768483 TGAAGACACCATACAGATCAGAAAA 58.232 36.000 0.00 0.00 0.00 2.29
2962 5148 7.884877 TGAAGACACCATACAGATCAGAAAATT 59.115 33.333 0.00 0.00 0.00 1.82
2964 5150 9.739276 AAGACACCATACAGATCAGAAAATTTA 57.261 29.630 0.00 0.00 0.00 1.40
3016 5245 0.035056 AGGGGAGGAAAGTTGATGCG 60.035 55.000 0.00 0.00 0.00 4.73
3017 5246 0.322546 GGGGAGGAAAGTTGATGCGT 60.323 55.000 0.00 0.00 0.00 5.24
3018 5247 0.804989 GGGAGGAAAGTTGATGCGTG 59.195 55.000 0.00 0.00 0.00 5.34
3019 5248 1.523758 GGAGGAAAGTTGATGCGTGT 58.476 50.000 0.00 0.00 0.00 4.49
3020 5249 1.197721 GGAGGAAAGTTGATGCGTGTG 59.802 52.381 0.00 0.00 0.00 3.82
3021 5250 1.873591 GAGGAAAGTTGATGCGTGTGT 59.126 47.619 0.00 0.00 0.00 3.72
3085 5314 1.197812 AATTGGGGGAAAGCTGATGC 58.802 50.000 0.00 0.00 40.05 3.91
3086 5315 1.039233 ATTGGGGGAAAGCTGATGCG 61.039 55.000 0.00 0.00 45.42 4.73
3087 5316 2.044946 GGGGGAAAGCTGATGCGT 60.045 61.111 0.00 0.00 45.42 5.24
3088 5317 2.409870 GGGGGAAAGCTGATGCGTG 61.410 63.158 0.00 0.00 45.42 5.34
3091 5320 0.598065 GGGAAAGCTGATGCGTGTTT 59.402 50.000 0.00 0.00 45.42 2.83
3092 5321 1.000274 GGGAAAGCTGATGCGTGTTTT 60.000 47.619 0.00 0.00 45.42 2.43
3133 5362 5.450965 GGAAAGTTGATGTTGATATGCCCTG 60.451 44.000 0.00 0.00 0.00 4.45
3180 5410 2.614057 GGTCTTGCCAATGTATCTTCCG 59.386 50.000 0.00 0.00 37.17 4.30
3187 5417 4.704540 TGCCAATGTATCTTCCGTTGATTT 59.295 37.500 0.00 0.00 31.83 2.17
3194 5424 7.136289 TGTATCTTCCGTTGATTTGGTTTAC 57.864 36.000 0.00 0.00 0.00 2.01
3374 5613 1.268845 ACAATCGGACGCCACAAAAAC 60.269 47.619 0.00 0.00 0.00 2.43
3403 5642 3.181459 GGAATAGAAAGGGCTCCTCTGAC 60.181 52.174 0.00 0.00 30.89 3.51
3442 5681 0.246635 GATACCCCATGTCGATCCCG 59.753 60.000 0.00 0.00 37.07 5.14
3443 5682 0.471211 ATACCCCATGTCGATCCCGT 60.471 55.000 0.00 0.00 37.05 5.28
3444 5683 0.185658 TACCCCATGTCGATCCCGTA 59.814 55.000 0.00 0.00 37.05 4.02
3446 5685 0.826256 CCCCATGTCGATCCCGTAGA 60.826 60.000 0.00 0.00 37.05 2.59
3447 5686 1.257743 CCCATGTCGATCCCGTAGAT 58.742 55.000 0.00 0.00 38.17 1.98
3519 5780 0.400213 TCTGCAAGGGGTACAGTTGG 59.600 55.000 0.00 0.00 33.12 3.77
3522 5783 0.893727 GCAAGGGGTACAGTTGGTGG 60.894 60.000 0.00 0.00 0.00 4.61
3571 5839 3.588955 GACAAATTTTAAGCTGGGCCAG 58.411 45.455 29.44 29.44 34.12 4.85
3590 5858 1.966451 CCGAATGCGATTAGGCCCC 60.966 63.158 0.00 0.00 40.82 5.80
3594 5862 1.963515 GAATGCGATTAGGCCCCAAAT 59.036 47.619 0.00 0.00 0.00 2.32
3597 5865 1.109323 GCGATTAGGCCCCAAATGCT 61.109 55.000 0.00 0.00 0.00 3.79
3601 5869 2.153034 TTAGGCCCCAAATGCTTACC 57.847 50.000 0.00 0.00 0.00 2.85
3602 5870 0.106918 TAGGCCCCAAATGCTTACCG 60.107 55.000 0.00 0.00 0.00 4.02
3603 5871 1.680989 GGCCCCAAATGCTTACCGT 60.681 57.895 0.00 0.00 0.00 4.83
3604 5872 0.394625 GGCCCCAAATGCTTACCGTA 60.395 55.000 0.00 0.00 0.00 4.02
3605 5873 0.736636 GCCCCAAATGCTTACCGTAC 59.263 55.000 0.00 0.00 0.00 3.67
3606 5874 1.680860 GCCCCAAATGCTTACCGTACT 60.681 52.381 0.00 0.00 0.00 2.73
3608 5876 2.285977 CCCAAATGCTTACCGTACTCC 58.714 52.381 0.00 0.00 0.00 3.85
3609 5877 2.285977 CCAAATGCTTACCGTACTCCC 58.714 52.381 0.00 0.00 0.00 4.30
3611 5879 3.195661 CAAATGCTTACCGTACTCCCTC 58.804 50.000 0.00 0.00 0.00 4.30
3612 5880 2.456073 ATGCTTACCGTACTCCCTCT 57.544 50.000 0.00 0.00 0.00 3.69
3613 5881 3.589951 ATGCTTACCGTACTCCCTCTA 57.410 47.619 0.00 0.00 0.00 2.43
3614 5882 3.589951 TGCTTACCGTACTCCCTCTAT 57.410 47.619 0.00 0.00 0.00 1.98
3615 5883 3.220110 TGCTTACCGTACTCCCTCTATG 58.780 50.000 0.00 0.00 0.00 2.23
3617 5885 3.488363 CTTACCGTACTCCCTCTATGCT 58.512 50.000 0.00 0.00 0.00 3.79
3618 5886 4.649692 CTTACCGTACTCCCTCTATGCTA 58.350 47.826 0.00 0.00 0.00 3.49
3619 5887 3.810721 ACCGTACTCCCTCTATGCTAT 57.189 47.619 0.00 0.00 0.00 2.97
3620 5888 4.923516 ACCGTACTCCCTCTATGCTATA 57.076 45.455 0.00 0.00 0.00 1.31
3621 5889 5.453866 ACCGTACTCCCTCTATGCTATAT 57.546 43.478 0.00 0.00 0.00 0.86
3622 5890 5.438833 ACCGTACTCCCTCTATGCTATATC 58.561 45.833 0.00 0.00 0.00 1.63
3623 5891 5.192121 ACCGTACTCCCTCTATGCTATATCT 59.808 44.000 0.00 0.00 0.00 1.98
3624 5892 5.761234 CCGTACTCCCTCTATGCTATATCTC 59.239 48.000 0.00 0.00 0.00 2.75
3625 5893 5.761234 CGTACTCCCTCTATGCTATATCTCC 59.239 48.000 0.00 0.00 0.00 3.71
3626 5894 5.805208 ACTCCCTCTATGCTATATCTCCA 57.195 43.478 0.00 0.00 0.00 3.86
3627 5895 5.515106 ACTCCCTCTATGCTATATCTCCAC 58.485 45.833 0.00 0.00 0.00 4.02
3628 5896 4.527944 TCCCTCTATGCTATATCTCCACG 58.472 47.826 0.00 0.00 0.00 4.94
3629 5897 4.018324 TCCCTCTATGCTATATCTCCACGT 60.018 45.833 0.00 0.00 0.00 4.49
3630 5898 5.191124 TCCCTCTATGCTATATCTCCACGTA 59.809 44.000 0.00 0.00 0.00 3.57
3631 5899 5.297278 CCCTCTATGCTATATCTCCACGTAC 59.703 48.000 0.00 0.00 0.00 3.67
3632 5900 5.880887 CCTCTATGCTATATCTCCACGTACA 59.119 44.000 0.00 0.00 0.00 2.90
3633 5901 6.374613 CCTCTATGCTATATCTCCACGTACAA 59.625 42.308 0.00 0.00 0.00 2.41
3634 5902 7.094334 CCTCTATGCTATATCTCCACGTACAAA 60.094 40.741 0.00 0.00 0.00 2.83
3635 5903 7.817641 TCTATGCTATATCTCCACGTACAAAG 58.182 38.462 0.00 0.00 0.00 2.77
3636 5904 5.847111 TGCTATATCTCCACGTACAAAGT 57.153 39.130 0.00 0.00 0.00 2.66
3637 5905 6.947644 TGCTATATCTCCACGTACAAAGTA 57.052 37.500 0.00 0.00 0.00 2.24
3638 5906 6.967135 TGCTATATCTCCACGTACAAAGTAG 58.033 40.000 0.00 0.00 0.00 2.57
3639 5907 6.544931 TGCTATATCTCCACGTACAAAGTAGT 59.455 38.462 0.00 0.00 0.00 2.73
3640 5908 6.856938 GCTATATCTCCACGTACAAAGTAGTG 59.143 42.308 0.00 0.00 0.00 2.74
3641 5909 6.770746 ATATCTCCACGTACAAAGTAGTGT 57.229 37.500 0.00 0.00 35.43 3.55
3642 5910 7.870509 ATATCTCCACGTACAAAGTAGTGTA 57.129 36.000 0.00 0.00 32.75 2.90
3643 5911 5.362556 TCTCCACGTACAAAGTAGTGTAC 57.637 43.478 5.58 5.58 46.88 2.90
3652 5920 4.357142 ACAAAGTAGTGTACATATCCGCG 58.643 43.478 0.00 0.00 0.00 6.46
3653 5921 4.142315 ACAAAGTAGTGTACATATCCGCGT 60.142 41.667 4.92 0.00 0.00 6.01
3654 5922 3.620929 AGTAGTGTACATATCCGCGTG 57.379 47.619 4.92 0.00 0.00 5.34
3655 5923 2.049228 GTAGTGTACATATCCGCGTGC 58.951 52.381 4.92 0.00 0.00 5.34
3762 6030 1.580845 GCCGATGCAGCAGTTGAGTT 61.581 55.000 1.53 0.00 37.47 3.01
3763 6031 0.877071 CCGATGCAGCAGTTGAGTTT 59.123 50.000 1.53 0.00 0.00 2.66
3764 6032 1.400629 CCGATGCAGCAGTTGAGTTTG 60.401 52.381 1.53 0.00 0.00 2.93
3765 6033 1.532437 CGATGCAGCAGTTGAGTTTGA 59.468 47.619 1.53 0.00 0.00 2.69
3766 6034 2.412455 CGATGCAGCAGTTGAGTTTGAG 60.412 50.000 1.53 0.00 0.00 3.02
3767 6035 2.042686 TGCAGCAGTTGAGTTTGAGT 57.957 45.000 0.00 0.00 0.00 3.41
3768 6036 1.942657 TGCAGCAGTTGAGTTTGAGTC 59.057 47.619 0.00 0.00 0.00 3.36
3770 6038 2.564771 CAGCAGTTGAGTTTGAGTCCA 58.435 47.619 0.00 0.00 0.00 4.02
3771 6039 2.289002 CAGCAGTTGAGTTTGAGTCCAC 59.711 50.000 0.00 0.00 0.00 4.02
3772 6040 1.604278 GCAGTTGAGTTTGAGTCCACC 59.396 52.381 0.00 0.00 0.00 4.61
3773 6041 2.222027 CAGTTGAGTTTGAGTCCACCC 58.778 52.381 0.00 0.00 0.00 4.61
3774 6042 1.143073 AGTTGAGTTTGAGTCCACCCC 59.857 52.381 0.00 0.00 0.00 4.95
3775 6043 1.133915 GTTGAGTTTGAGTCCACCCCA 60.134 52.381 0.00 0.00 0.00 4.96
3776 6044 1.217916 TGAGTTTGAGTCCACCCCAA 58.782 50.000 0.00 0.00 0.00 4.12
3777 6045 1.142870 TGAGTTTGAGTCCACCCCAAG 59.857 52.381 0.00 0.00 0.00 3.61
3778 6046 1.143073 GAGTTTGAGTCCACCCCAAGT 59.857 52.381 0.00 0.00 0.00 3.16
3833 6101 0.408309 TCCAGGGAAGAGGAAGACGA 59.592 55.000 0.00 0.00 0.00 4.20
3842 6113 3.119096 GGAAGACGACTTGGGCGC 61.119 66.667 4.51 0.00 36.39 6.53
3858 6129 2.931386 GCCAGCGCGATCATACAC 59.069 61.111 12.10 0.00 0.00 2.90
3859 6130 1.592669 GCCAGCGCGATCATACACT 60.593 57.895 12.10 0.00 0.00 3.55
3861 6132 0.941463 CCAGCGCGATCATACACTCC 60.941 60.000 12.10 0.00 0.00 3.85
3862 6133 0.031314 CAGCGCGATCATACACTCCT 59.969 55.000 12.10 0.00 0.00 3.69
3863 6134 0.312416 AGCGCGATCATACACTCCTC 59.688 55.000 12.10 0.00 0.00 3.71
3865 6136 0.955178 CGCGATCATACACTCCTCCT 59.045 55.000 0.00 0.00 0.00 3.69
3866 6137 1.335415 CGCGATCATACACTCCTCCTG 60.335 57.143 0.00 0.00 0.00 3.86
3877 6164 2.670934 CCTCCTGCACCACACAGC 60.671 66.667 0.00 0.00 33.65 4.40
4029 6326 4.292178 GATCTCCCGGCGCTCCTG 62.292 72.222 7.64 0.00 0.00 3.86
4069 6366 4.609995 GGCGATCCGTTTCCTTGA 57.390 55.556 0.00 0.00 0.00 3.02
4071 6368 1.090052 GGCGATCCGTTTCCTTGAGG 61.090 60.000 0.00 0.00 0.00 3.86
4097 6394 1.327292 CGATTTCGTGTTGCAACGGC 61.327 55.000 23.79 17.52 43.73 5.68
4099 6396 1.729470 ATTTCGTGTTGCAACGGCCA 61.729 50.000 23.79 4.14 43.73 5.36
4102 6399 2.804856 GTGTTGCAACGGCCAAGT 59.195 55.556 23.79 0.00 40.13 3.16
4103 6400 1.299089 GTGTTGCAACGGCCAAGTC 60.299 57.895 23.79 0.00 40.13 3.01
4106 6403 1.754621 TTGCAACGGCCAAGTCCAA 60.755 52.632 2.24 0.00 40.13 3.53
4107 6404 1.112315 TTGCAACGGCCAAGTCCAAT 61.112 50.000 2.24 0.00 40.13 3.16
4108 6405 1.112315 TGCAACGGCCAAGTCCAATT 61.112 50.000 2.24 0.00 40.13 2.32
4109 6406 0.033366 GCAACGGCCAAGTCCAATTT 59.967 50.000 2.24 0.00 0.00 1.82
4111 6408 2.832563 CAACGGCCAAGTCCAATTTTT 58.167 42.857 2.24 0.00 0.00 1.94
4134 6431 3.430333 TTTTTGAAACGAGCCAAGTCC 57.570 42.857 0.00 0.00 0.00 3.85
4136 6433 2.045561 TTGAAACGAGCCAAGTCCAA 57.954 45.000 0.00 0.00 0.00 3.53
4137 6434 2.045561 TGAAACGAGCCAAGTCCAAA 57.954 45.000 0.00 0.00 0.00 3.28
4139 6436 2.955660 TGAAACGAGCCAAGTCCAAATT 59.044 40.909 0.00 0.00 0.00 1.82
4140 6437 3.383185 TGAAACGAGCCAAGTCCAAATTT 59.617 39.130 0.00 0.00 0.00 1.82
4141 6438 4.580995 TGAAACGAGCCAAGTCCAAATTTA 59.419 37.500 0.00 0.00 0.00 1.40
4142 6439 4.766404 AACGAGCCAAGTCCAAATTTAG 57.234 40.909 0.00 0.00 0.00 1.85
4143 6440 4.015872 ACGAGCCAAGTCCAAATTTAGA 57.984 40.909 0.00 0.00 0.00 2.10
4144 6441 4.003648 ACGAGCCAAGTCCAAATTTAGAG 58.996 43.478 0.00 0.00 0.00 2.43
4145 6442 4.003648 CGAGCCAAGTCCAAATTTAGAGT 58.996 43.478 0.00 0.00 0.00 3.24
4146 6443 4.142816 CGAGCCAAGTCCAAATTTAGAGTG 60.143 45.833 0.00 0.00 0.00 3.51
4161 6477 0.674534 GAGTGAGGTGTCTCCGTTGT 59.325 55.000 0.00 0.00 41.99 3.32
4170 6486 0.456312 GTCTCCGTTGTGCCGAGTAG 60.456 60.000 0.00 0.00 0.00 2.57
4171 6487 0.607217 TCTCCGTTGTGCCGAGTAGA 60.607 55.000 0.00 0.00 0.00 2.59
4172 6488 0.179161 CTCCGTTGTGCCGAGTAGAG 60.179 60.000 0.00 0.00 0.00 2.43
4173 6489 0.892358 TCCGTTGTGCCGAGTAGAGT 60.892 55.000 0.00 0.00 0.00 3.24
4174 6490 0.806868 CCGTTGTGCCGAGTAGAGTA 59.193 55.000 0.00 0.00 0.00 2.59
4198 6520 0.895100 TTTGGTGATGCTGCCTGTCC 60.895 55.000 0.00 0.00 0.00 4.02
4231 6553 1.227002 GAGGAATCGCAGGACGTCC 60.227 63.158 27.67 27.67 44.19 4.79
4232 6554 1.945354 GAGGAATCGCAGGACGTCCA 61.945 60.000 35.00 16.17 44.19 4.02
4234 6556 1.519455 GAATCGCAGGACGTCCAGG 60.519 63.158 35.00 26.34 44.19 4.45
4268 6590 1.442769 CGACCAGTGTCCAAATCCAG 58.557 55.000 0.00 0.00 38.32 3.86
4299 6623 3.050876 TCCTAATATGGTAGGTGTGGGGT 60.051 47.826 1.25 0.00 41.40 4.95
4308 6632 2.719354 GTGTGGGGTGTGCGTTTC 59.281 61.111 0.00 0.00 0.00 2.78
4339 6663 0.108377 TGACGCGTGTGAGCCATTAT 60.108 50.000 20.70 0.00 0.00 1.28
4353 6679 6.098982 GTGAGCCATTATCTAGGTATATGCCT 59.901 42.308 17.15 17.15 42.43 4.75
4365 6691 5.191426 AGGTATATGCCTGATGAATGATGC 58.809 41.667 12.09 0.00 37.50 3.91
4366 6692 4.945543 GGTATATGCCTGATGAATGATGCA 59.054 41.667 2.01 0.00 0.00 3.96
4367 6693 5.593095 GGTATATGCCTGATGAATGATGCAT 59.407 40.000 0.00 0.00 41.79 3.96
4376 6705 6.448207 TGATGAATGATGCATTACCGAAAA 57.552 33.333 0.00 0.00 33.90 2.29
4396 6725 1.286248 TAAGGGAGAAAGGAGGCCAC 58.714 55.000 5.01 0.00 0.00 5.01
4407 6736 4.320456 AGGCCACGGCACTCTGTG 62.320 66.667 10.83 0.00 46.62 3.66
4409 6738 3.044305 GCCACGGCACTCTGTGTC 61.044 66.667 2.36 0.00 45.84 3.67
4416 6745 0.037790 GGCACTCTGTGTCTCTGTCC 60.038 60.000 0.00 0.00 35.05 4.02
4481 7015 5.179452 AGAATTACAGCAACATACCTGGT 57.821 39.130 4.05 4.05 33.43 4.00
4485 7019 5.950544 TTACAGCAACATACCTGGTCTAT 57.049 39.130 0.63 0.00 33.43 1.98
4502 7036 2.236146 TCTATTGATCGTTGCCACCACT 59.764 45.455 0.00 0.00 0.00 4.00
4585 7155 5.139727 ACAAGAAGGACAAATGTTGGATCA 58.860 37.500 0.00 0.00 34.12 2.92
4677 7258 2.955660 TGTTGTGTTCAGAATTCCACCC 59.044 45.455 0.65 0.00 0.00 4.61
4717 7298 3.687125 AGAGGCTTAAAAACCTGGTAGC 58.313 45.455 9.55 9.55 36.05 3.58
4718 7299 3.330998 AGAGGCTTAAAAACCTGGTAGCT 59.669 43.478 15.91 0.00 36.05 3.32
4719 7300 4.534897 AGAGGCTTAAAAACCTGGTAGCTA 59.465 41.667 15.91 0.00 36.05 3.32
4720 7301 4.586884 AGGCTTAAAAACCTGGTAGCTAC 58.413 43.478 15.88 15.88 34.07 3.58
4721 7302 3.693085 GGCTTAAAAACCTGGTAGCTACC 59.307 47.826 32.37 32.37 46.62 3.18
4722 7303 4.567116 GGCTTAAAAACCTGGTAGCTACCT 60.567 45.833 36.49 20.93 46.58 3.08
4723 7304 4.395231 GCTTAAAAACCTGGTAGCTACCTG 59.605 45.833 36.49 34.35 46.58 4.00
4728 7309 2.212327 CTGGTAGCTACCTGGTGGG 58.788 63.158 36.49 18.71 46.58 4.61
4761 7342 1.259840 ACCAGCATTTGACCCATGGC 61.260 55.000 6.09 0.00 0.00 4.40
4783 7364 1.348696 TCCAGTGATCTGCAAGCAAGA 59.651 47.619 0.00 0.00 40.09 3.02
4785 7366 2.424557 CAGTGATCTGCAAGCAAGAGT 58.575 47.619 0.00 0.00 34.79 3.24
4788 7369 4.634883 CAGTGATCTGCAAGCAAGAGTTAT 59.365 41.667 0.00 0.00 34.79 1.89
4789 7370 4.634883 AGTGATCTGCAAGCAAGAGTTATG 59.365 41.667 0.00 0.00 0.00 1.90
4790 7371 4.394300 GTGATCTGCAAGCAAGAGTTATGT 59.606 41.667 0.00 0.00 0.00 2.29
4791 7372 5.582269 GTGATCTGCAAGCAAGAGTTATGTA 59.418 40.000 0.00 0.00 0.00 2.29
4792 7373 6.092670 GTGATCTGCAAGCAAGAGTTATGTAA 59.907 38.462 0.00 0.00 0.00 2.41
4793 7374 6.825213 TGATCTGCAAGCAAGAGTTATGTAAT 59.175 34.615 0.00 0.00 0.00 1.89
4794 7375 6.426980 TCTGCAAGCAAGAGTTATGTAATG 57.573 37.500 0.00 0.00 0.00 1.90
4795 7376 6.172630 TCTGCAAGCAAGAGTTATGTAATGA 58.827 36.000 0.00 0.00 0.00 2.57
4796 7377 6.825213 TCTGCAAGCAAGAGTTATGTAATGAT 59.175 34.615 0.00 0.00 0.00 2.45
4797 7378 6.788243 TGCAAGCAAGAGTTATGTAATGATG 58.212 36.000 0.00 0.00 0.00 3.07
4798 7379 6.598850 TGCAAGCAAGAGTTATGTAATGATGA 59.401 34.615 0.00 0.00 0.00 2.92
4799 7380 7.283807 TGCAAGCAAGAGTTATGTAATGATGAT 59.716 33.333 0.00 0.00 0.00 2.45
4800 7381 7.590322 GCAAGCAAGAGTTATGTAATGATGATG 59.410 37.037 0.00 0.00 0.00 3.07
4819 7400 7.554476 TGATGATGTAAACCATTCGGAATGTTA 59.446 33.333 24.70 16.36 37.18 2.41
4845 7426 9.794719 ATAAAATTTAGATGGACTAGTTAGCCC 57.205 33.333 0.00 0.00 32.30 5.19
4846 7427 7.453141 AAATTTAGATGGACTAGTTAGCCCT 57.547 36.000 0.00 0.00 32.30 5.19
4847 7428 8.562949 AAATTTAGATGGACTAGTTAGCCCTA 57.437 34.615 0.00 0.00 32.30 3.53
4848 7429 6.973460 TTTAGATGGACTAGTTAGCCCTAC 57.027 41.667 0.00 0.00 32.30 3.18
4849 7430 3.488363 AGATGGACTAGTTAGCCCTACG 58.512 50.000 0.00 0.00 0.00 3.51
4850 7431 2.814805 TGGACTAGTTAGCCCTACGT 57.185 50.000 0.00 0.00 0.00 3.57
4851 7432 2.372264 TGGACTAGTTAGCCCTACGTG 58.628 52.381 0.00 0.00 0.00 4.49
4852 7433 1.066757 GGACTAGTTAGCCCTACGTGC 59.933 57.143 0.00 0.00 0.00 5.34
4853 7434 1.747355 GACTAGTTAGCCCTACGTGCA 59.253 52.381 0.00 0.00 0.00 4.57
4854 7435 2.165030 GACTAGTTAGCCCTACGTGCAA 59.835 50.000 0.00 0.00 0.00 4.08
4855 7436 2.564062 ACTAGTTAGCCCTACGTGCAAA 59.436 45.455 0.00 0.00 0.00 3.68
4856 7437 2.554370 AGTTAGCCCTACGTGCAAAA 57.446 45.000 0.00 0.00 0.00 2.44
4857 7438 2.853705 AGTTAGCCCTACGTGCAAAAA 58.146 42.857 0.00 0.00 0.00 1.94
4858 7439 3.418047 AGTTAGCCCTACGTGCAAAAAT 58.582 40.909 0.00 0.00 0.00 1.82
4859 7440 3.190535 AGTTAGCCCTACGTGCAAAAATG 59.809 43.478 0.00 0.00 0.00 2.32
4870 7451 8.018520 CCTACGTGCAAAAATGAAAATACTACA 58.981 33.333 0.00 0.00 0.00 2.74
4883 7464 7.870826 TGAAAATACTACACAACCAATGTCAG 58.129 34.615 0.00 0.00 41.46 3.51
4887 7468 9.733556 AAATACTACACAACCAATGTCAGATAA 57.266 29.630 0.00 0.00 41.46 1.75
4889 7470 9.733556 ATACTACACAACCAATGTCAGATAAAA 57.266 29.630 0.00 0.00 41.46 1.52
4937 7545 5.048013 CAGTACAGAAGACCACACACATAGA 60.048 44.000 0.00 0.00 0.00 1.98
4970 7579 4.450419 CAGAAAAGTGAACCAGTAGCAGAG 59.550 45.833 0.00 0.00 0.00 3.35
4971 7580 4.101741 AGAAAAGTGAACCAGTAGCAGAGT 59.898 41.667 0.00 0.00 0.00 3.24
4972 7581 4.423625 AAAGTGAACCAGTAGCAGAGTT 57.576 40.909 0.00 0.00 0.00 3.01
4988 7597 3.610242 CAGAGTTCGTTCACTAGATGCAC 59.390 47.826 0.00 0.00 0.00 4.57
4992 7601 3.217599 TCGTTCACTAGATGCACTCAC 57.782 47.619 0.00 0.00 0.00 3.51
5014 7631 5.240844 CACCCTATGTCTGTGTGTCGATATA 59.759 44.000 0.00 0.00 0.00 0.86
5015 7632 6.010850 ACCCTATGTCTGTGTGTCGATATAT 58.989 40.000 0.00 0.00 0.00 0.86
5047 7664 4.685169 ATATTTCAACACAAGGTCGCAG 57.315 40.909 0.00 0.00 0.00 5.18
5097 7979 2.094390 GCTCTCCAAATGCTTGCATTCA 60.094 45.455 19.32 7.58 0.00 2.57
5100 7982 3.113322 CTCCAAATGCTTGCATTCATCG 58.887 45.455 19.32 9.65 0.00 3.84
5108 7990 0.740149 TTGCATTCATCGGCCATGTC 59.260 50.000 2.24 0.00 33.66 3.06
5208 8099 8.245195 TGTTGTAGATAAGATACAGCCATGTA 57.755 34.615 0.00 0.00 45.73 2.29
5274 8168 0.753262 AGTCCGATAAGAAGGCGCAT 59.247 50.000 10.83 0.00 0.00 4.73
5373 8267 0.324285 AGAGGGCAAGAGCAAGACAG 59.676 55.000 0.00 0.00 44.61 3.51
5405 8299 7.578310 ATTCCAAATGATCTATGTGGTTCTG 57.422 36.000 11.75 0.00 43.65 3.02
5437 8331 9.528018 CAGATAAGAAGAACATTACCTCTCTTC 57.472 37.037 3.07 3.07 42.66 2.87
5440 8334 7.546250 AAGAAGAACATTACCTCTCTTCAGA 57.454 36.000 11.93 0.00 44.06 3.27
5484 8392 6.660521 ACCTCTTATTTGCTGATGTCATTTCA 59.339 34.615 0.00 0.00 0.00 2.69
5486 8394 8.030692 CCTCTTATTTGCTGATGTCATTTCAAA 58.969 33.333 9.16 9.16 0.00 2.69
5487 8395 9.414295 CTCTTATTTGCTGATGTCATTTCAAAA 57.586 29.630 10.20 1.71 0.00 2.44
5628 8536 0.036732 TAGCAGAAGCCACACAAGGG 59.963 55.000 0.00 0.00 43.56 3.95
5649 8557 3.378427 GGTTCTCAACTGACAACAAGCTT 59.622 43.478 0.00 0.00 0.00 3.74
5664 8572 0.036875 AGCTTGGTGAAGGTGGCTAC 59.963 55.000 0.00 0.00 38.51 3.58
5693 8601 6.766467 CCAGTCTACAAGGTACTGAAGTTTTT 59.234 38.462 3.37 0.00 42.59 1.94
5696 8604 9.543783 AGTCTACAAGGTACTGAAGTTTTTAAG 57.456 33.333 0.00 0.00 40.86 1.85
5697 8605 8.771766 GTCTACAAGGTACTGAAGTTTTTAAGG 58.228 37.037 0.00 0.00 40.86 2.69
5700 8608 7.344134 ACAAGGTACTGAAGTTTTTAAGGACT 58.656 34.615 0.00 0.00 40.86 3.85
5701 8609 7.498239 ACAAGGTACTGAAGTTTTTAAGGACTC 59.502 37.037 0.00 0.00 40.86 3.36
5718 8628 6.600882 AGGACTCCATTAGTAGTTTCGAAA 57.399 37.500 6.47 6.47 39.07 3.46
5722 8632 7.333672 GGACTCCATTAGTAGTTTCGAAACATT 59.666 37.037 35.29 23.87 39.07 2.71
5726 8636 6.150474 CCATTAGTAGTTTCGAAACATTGGGT 59.850 38.462 35.29 20.10 41.30 4.51
5732 8642 3.750639 TTCGAAACATTGGGTAATCGC 57.249 42.857 0.00 0.00 38.27 4.58
5733 8643 2.701107 TCGAAACATTGGGTAATCGCA 58.299 42.857 0.00 0.00 38.27 5.10
5738 8648 4.434713 AACATTGGGTAATCGCAACTTC 57.565 40.909 0.24 0.00 46.29 3.01
5836 8746 2.186532 TAGAGCAGTCTCACACGTCT 57.813 50.000 0.00 0.00 41.81 4.18
5841 8751 1.989165 GCAGTCTCACACGTCTGATTC 59.011 52.381 4.04 0.00 0.00 2.52
6024 8965 3.243501 GCTGCATCTGTGGACAAGAAAAA 60.244 43.478 0.00 0.00 0.00 1.94
6113 9060 3.582647 TCTGTGAGCATGAAAGTTCCCTA 59.417 43.478 0.00 0.00 0.00 3.53
6116 9063 4.225942 TGTGAGCATGAAAGTTCCCTATCT 59.774 41.667 0.00 0.00 0.00 1.98
6179 9128 7.066645 TCAGACAAATCCAAGATTATGCTTCTG 59.933 37.037 0.00 0.00 0.00 3.02
6248 9197 2.755655 ACTGTATCTTCACCAGGACTCG 59.244 50.000 0.00 0.00 0.00 4.18
6263 9212 4.035792 CAGGACTCGAGATACAGAATCGTT 59.964 45.833 21.68 0.00 39.79 3.85
6272 9221 6.512578 CGAGATACAGAATCGTTCACAGAGAT 60.513 42.308 1.58 0.00 39.79 2.75
6392 9341 2.432628 CTTCGAGTGGTCGGCACC 60.433 66.667 0.00 0.00 46.80 5.01
6430 9382 8.523915 ACAAGCAATTCAATCACCTTATATCA 57.476 30.769 0.00 0.00 0.00 2.15
6533 9501 1.993370 GGAGTGTTCTCGGTGAAATCG 59.007 52.381 0.00 0.00 41.26 3.34
6670 9639 3.660501 TGTCTGAACATGTAGCTCGTT 57.339 42.857 0.00 0.00 0.00 3.85
6679 9648 4.352039 ACATGTAGCTCGTTAATGTCTCG 58.648 43.478 0.00 0.00 0.00 4.04
6702 9671 5.451103 CGCCACTATCTCTGAATCTCTGAAA 60.451 44.000 0.00 0.00 0.00 2.69
6742 9712 9.401058 CTGAATCTCTGAATATTTTTACCAGGT 57.599 33.333 0.00 0.00 0.00 4.00
6797 9767 1.292541 GGTGGACGAGACCCTGAAC 59.707 63.158 0.00 0.00 0.00 3.18
7072 10042 1.179814 ATGATCGAGGGCCGGTAGAC 61.180 60.000 1.90 0.00 39.14 2.59
7089 10060 5.410132 CGGTAGACATGTCATTGTTTTGGTA 59.590 40.000 27.02 4.46 0.00 3.25
7095 10066 8.203485 AGACATGTCATTGTTTTGGTAATTTGT 58.797 29.630 27.02 0.00 0.00 2.83
7210 10193 1.745232 AGTTGTTCGTCACCTTGCAA 58.255 45.000 0.00 0.00 0.00 4.08
7213 10196 1.454201 TGTTCGTCACCTTGCAAACA 58.546 45.000 0.00 0.00 0.00 2.83
7431 10421 3.771160 GCGGGTCCCACGAGATGT 61.771 66.667 9.12 0.00 0.00 3.06
7433 10423 1.295423 CGGGTCCCACGAGATGTTT 59.705 57.895 9.12 0.00 0.00 2.83
7434 10424 0.321298 CGGGTCCCACGAGATGTTTT 60.321 55.000 9.12 0.00 0.00 2.43
7436 10426 1.810755 GGGTCCCACGAGATGTTTTTC 59.189 52.381 1.78 0.00 0.00 2.29
7481 10472 7.383102 ACATGAAAAGATGTGATGGTTCTAC 57.617 36.000 0.00 0.00 35.17 2.59
7507 10502 6.670695 AAAAAGGATGTGATAGGTGCTTTT 57.329 33.333 0.00 0.00 36.52 2.27
7574 10591 5.111293 GTTGGCTTATTGAATTGATGTGGG 58.889 41.667 0.00 0.00 0.00 4.61
7626 10643 3.295973 TGATCATACCGGACAGACATCA 58.704 45.455 9.46 4.95 0.00 3.07
7642 10659 8.137745 ACAGACATCAATTTGATAAAATGGGT 57.862 30.769 11.44 4.10 34.28 4.51
7655 10672 7.332557 TGATAAAATGGGTGACGTTACATAGT 58.667 34.615 12.91 0.00 0.00 2.12
7658 10675 2.527497 TGGGTGACGTTACATAGTGGA 58.473 47.619 12.91 0.00 0.00 4.02
7667 10684 7.858879 GTGACGTTACATAGTGGAAAATGTTTT 59.141 33.333 5.47 0.00 37.50 2.43
7668 10685 8.407064 TGACGTTACATAGTGGAAAATGTTTTT 58.593 29.630 0.00 0.00 37.50 1.94
7944 10961 3.827898 GACTCGGGCGGACCTCTG 61.828 72.222 0.00 0.00 36.97 3.35
7970 10987 4.475135 GCCGAAGCACCCCTCCTC 62.475 72.222 0.00 0.00 39.53 3.71
7971 10988 3.787001 CCGAAGCACCCCTCCTCC 61.787 72.222 0.00 0.00 0.00 4.30
7972 10989 3.787001 CGAAGCACCCCTCCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
7973 10990 3.412408 GAAGCACCCCTCCTCCCC 61.412 72.222 0.00 0.00 0.00 4.81
7977 10994 2.692741 CACCCCTCCTCCCCCTTC 60.693 72.222 0.00 0.00 0.00 3.46
7978 10995 4.040198 ACCCCTCCTCCCCCTTCC 62.040 72.222 0.00 0.00 0.00 3.46
7979 10996 4.845307 CCCCTCCTCCCCCTTCCC 62.845 77.778 0.00 0.00 0.00 3.97
7980 10997 4.845307 CCCTCCTCCCCCTTCCCC 62.845 77.778 0.00 0.00 0.00 4.81
7981 10998 4.845307 CCTCCTCCCCCTTCCCCC 62.845 77.778 0.00 0.00 0.00 5.40
8055 11072 4.303257 GGACCTGCTCCCTTTTCG 57.697 61.111 0.00 0.00 31.83 3.46
8056 11073 2.041115 GGACCTGCTCCCTTTTCGC 61.041 63.158 0.00 0.00 31.83 4.70
8057 11074 2.358737 ACCTGCTCCCTTTTCGCG 60.359 61.111 0.00 0.00 0.00 5.87
8058 11075 3.804193 CCTGCTCCCTTTTCGCGC 61.804 66.667 0.00 0.00 0.00 6.86
8059 11076 4.152625 CTGCTCCCTTTTCGCGCG 62.153 66.667 26.76 26.76 0.00 6.86
8081 11098 4.680237 CTCCCTGTTGCGCGTGGA 62.680 66.667 8.43 2.85 0.00 4.02
8082 11099 3.958147 CTCCCTGTTGCGCGTGGAT 62.958 63.158 8.43 0.00 0.00 3.41
8083 11100 3.499737 CCCTGTTGCGCGTGGATC 61.500 66.667 8.43 0.00 0.00 3.36
8084 11101 3.499737 CCTGTTGCGCGTGGATCC 61.500 66.667 8.43 4.20 0.00 3.36
8085 11102 3.853330 CTGTTGCGCGTGGATCCG 61.853 66.667 8.43 0.00 0.00 4.18
8093 11110 2.182284 CGTGGATCCGCGTTGGTA 59.818 61.111 34.27 0.00 43.86 3.25
8094 11111 2.162754 CGTGGATCCGCGTTGGTAC 61.163 63.158 34.27 11.59 43.86 3.34
8103 11120 4.067016 CGTTGGTACGCACGTGGC 62.067 66.667 18.88 8.78 41.41 5.01
8126 11143 4.020378 GGCTCCGCGCGTTTTCAA 62.020 61.111 29.95 5.59 40.44 2.69
8127 11144 2.499732 GCTCCGCGCGTTTTCAAG 60.500 61.111 29.95 15.73 0.00 3.02
8128 11145 2.499732 CTCCGCGCGTTTTCAAGC 60.500 61.111 29.95 0.00 0.00 4.01
8129 11146 2.954753 CTCCGCGCGTTTTCAAGCT 61.955 57.895 29.95 0.00 0.00 3.74
8130 11147 2.796617 CCGCGCGTTTTCAAGCTG 60.797 61.111 29.95 4.86 0.00 4.24
8131 11148 3.452668 CGCGCGTTTTCAAGCTGC 61.453 61.111 24.19 0.00 0.00 5.25
8132 11149 2.050985 GCGCGTTTTCAAGCTGCT 60.051 55.556 8.43 0.00 32.96 4.24
8133 11150 2.359791 GCGCGTTTTCAAGCTGCTG 61.360 57.895 8.43 0.00 32.96 4.41
8134 11151 2.359791 CGCGTTTTCAAGCTGCTGC 61.360 57.895 1.35 7.62 40.05 5.25
8135 11152 2.359791 GCGTTTTCAAGCTGCTGCG 61.360 57.895 1.35 0.00 45.42 5.18
8136 11153 2.359791 CGTTTTCAAGCTGCTGCGC 61.360 57.895 1.35 0.00 45.42 6.09
8137 11154 2.051076 TTTTCAAGCTGCTGCGCG 60.051 55.556 1.35 0.00 45.42 6.86
8138 11155 4.688419 TTTCAAGCTGCTGCGCGC 62.688 61.111 27.26 27.26 45.42 6.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.391661 GCCTTCAGTCGATTCCAGCA 60.392 55.000 0.00 0.00 0.00 4.41
1 2 1.424493 CGCCTTCAGTCGATTCCAGC 61.424 60.000 0.00 0.00 0.00 4.85
2 3 0.807667 CCGCCTTCAGTCGATTCCAG 60.808 60.000 0.00 0.00 0.00 3.86
3 4 1.218047 CCGCCTTCAGTCGATTCCA 59.782 57.895 0.00 0.00 0.00 3.53
4 5 0.528684 CTCCGCCTTCAGTCGATTCC 60.529 60.000 0.00 0.00 0.00 3.01
5 6 0.173708 ACTCCGCCTTCAGTCGATTC 59.826 55.000 0.00 0.00 0.00 2.52
6 7 0.608640 AACTCCGCCTTCAGTCGATT 59.391 50.000 0.00 0.00 0.00 3.34
7 8 0.108615 CAACTCCGCCTTCAGTCGAT 60.109 55.000 0.00 0.00 0.00 3.59
8 9 1.289066 CAACTCCGCCTTCAGTCGA 59.711 57.895 0.00 0.00 0.00 4.20
9 10 1.738099 CCAACTCCGCCTTCAGTCG 60.738 63.158 0.00 0.00 0.00 4.18
10 11 0.034896 TTCCAACTCCGCCTTCAGTC 59.965 55.000 0.00 0.00 0.00 3.51
11 12 0.250338 GTTCCAACTCCGCCTTCAGT 60.250 55.000 0.00 0.00 0.00 3.41
12 13 0.955919 GGTTCCAACTCCGCCTTCAG 60.956 60.000 0.00 0.00 0.00 3.02
13 14 1.072505 GGTTCCAACTCCGCCTTCA 59.927 57.895 0.00 0.00 0.00 3.02
14 15 0.536460 TTGGTTCCAACTCCGCCTTC 60.536 55.000 0.00 0.00 0.00 3.46
15 16 0.822121 GTTGGTTCCAACTCCGCCTT 60.822 55.000 22.68 0.00 41.97 4.35
16 17 1.228154 GTTGGTTCCAACTCCGCCT 60.228 57.895 22.68 0.00 41.97 5.52
17 18 1.527380 TGTTGGTTCCAACTCCGCC 60.527 57.895 27.58 8.07 44.55 6.13
18 19 1.652563 GTGTTGGTTCCAACTCCGC 59.347 57.895 27.58 15.42 44.55 5.54
19 20 2.327228 GGTGTTGGTTCCAACTCCG 58.673 57.895 28.12 0.00 44.79 4.63
21 22 0.668535 GCAGGTGTTGGTTCCAACTC 59.331 55.000 27.58 24.37 44.55 3.01
22 23 0.258774 AGCAGGTGTTGGTTCCAACT 59.741 50.000 27.58 11.37 44.55 3.16
23 24 1.111277 AAGCAGGTGTTGGTTCCAAC 58.889 50.000 23.05 23.05 43.76 3.77
24 25 1.859302 AAAGCAGGTGTTGGTTCCAA 58.141 45.000 0.00 0.00 46.27 3.53
25 26 1.480137 CAAAAGCAGGTGTTGGTTCCA 59.520 47.619 0.00 0.00 46.27 3.53
26 27 1.480545 ACAAAAGCAGGTGTTGGTTCC 59.519 47.619 7.45 0.00 46.27 3.62
27 28 2.929398 CAACAAAAGCAGGTGTTGGTTC 59.071 45.455 15.00 0.00 46.27 3.62
32 33 2.620242 CTTGCAACAAAAGCAGGTGTT 58.380 42.857 0.00 0.00 43.75 3.32
33 34 1.134729 CCTTGCAACAAAAGCAGGTGT 60.135 47.619 0.00 0.00 43.75 4.16
34 35 1.136695 TCCTTGCAACAAAAGCAGGTG 59.863 47.619 0.00 0.00 43.75 4.00
35 36 1.484038 TCCTTGCAACAAAAGCAGGT 58.516 45.000 0.00 0.00 43.75 4.00
36 37 2.803956 CAATCCTTGCAACAAAAGCAGG 59.196 45.455 0.00 0.00 43.75 4.85
37 38 2.803956 CCAATCCTTGCAACAAAAGCAG 59.196 45.455 0.00 0.00 43.75 4.24
38 39 2.433604 TCCAATCCTTGCAACAAAAGCA 59.566 40.909 0.00 0.00 40.85 3.91
39 40 3.062042 CTCCAATCCTTGCAACAAAAGC 58.938 45.455 0.00 0.00 0.00 3.51
40 41 4.053295 CACTCCAATCCTTGCAACAAAAG 58.947 43.478 0.00 0.00 0.00 2.27
41 42 3.450457 ACACTCCAATCCTTGCAACAAAA 59.550 39.130 0.00 0.00 0.00 2.44
42 43 3.030291 ACACTCCAATCCTTGCAACAAA 58.970 40.909 0.00 0.00 0.00 2.83
43 44 2.665165 ACACTCCAATCCTTGCAACAA 58.335 42.857 0.00 0.00 0.00 2.83
44 45 2.363306 ACACTCCAATCCTTGCAACA 57.637 45.000 0.00 0.00 0.00 3.33
45 46 3.733443 AAACACTCCAATCCTTGCAAC 57.267 42.857 0.00 0.00 0.00 4.17
46 47 3.243367 CGAAAACACTCCAATCCTTGCAA 60.243 43.478 0.00 0.00 0.00 4.08
47 48 2.293122 CGAAAACACTCCAATCCTTGCA 59.707 45.455 0.00 0.00 0.00 4.08
48 49 2.351738 CCGAAAACACTCCAATCCTTGC 60.352 50.000 0.00 0.00 0.00 4.01
49 50 2.351738 GCCGAAAACACTCCAATCCTTG 60.352 50.000 0.00 0.00 0.00 3.61
50 51 1.886542 GCCGAAAACACTCCAATCCTT 59.113 47.619 0.00 0.00 0.00 3.36
51 52 1.534729 GCCGAAAACACTCCAATCCT 58.465 50.000 0.00 0.00 0.00 3.24
52 53 0.168128 CGCCGAAAACACTCCAATCC 59.832 55.000 0.00 0.00 0.00 3.01
53 54 0.168128 CCGCCGAAAACACTCCAATC 59.832 55.000 0.00 0.00 0.00 2.67
54 55 1.862602 GCCGCCGAAAACACTCCAAT 61.863 55.000 0.00 0.00 0.00 3.16
55 56 2.548295 GCCGCCGAAAACACTCCAA 61.548 57.895 0.00 0.00 0.00 3.53
56 57 2.975799 GCCGCCGAAAACACTCCA 60.976 61.111 0.00 0.00 0.00 3.86
57 58 4.084888 CGCCGCCGAAAACACTCC 62.085 66.667 0.00 0.00 36.29 3.85
58 59 4.084888 CCGCCGCCGAAAACACTC 62.085 66.667 0.00 0.00 36.29 3.51
59 60 4.922026 ACCGCCGCCGAAAACACT 62.922 61.111 0.00 0.00 36.29 3.55
60 61 4.676586 CACCGCCGCCGAAAACAC 62.677 66.667 0.00 0.00 36.29 3.32
61 62 4.912485 TCACCGCCGCCGAAAACA 62.912 61.111 0.00 0.00 36.29 2.83
62 63 3.428282 ATCACCGCCGCCGAAAAC 61.428 61.111 0.00 0.00 36.29 2.43
63 64 3.427425 CATCACCGCCGCCGAAAA 61.427 61.111 0.00 0.00 36.29 2.29
70 71 2.925262 TTTTTGCCCATCACCGCCG 61.925 57.895 0.00 0.00 0.00 6.46
71 72 3.055580 TTTTTGCCCATCACCGCC 58.944 55.556 0.00 0.00 0.00 6.13
86 87 5.007528 CCGTTTGCAACAAATCAGGATTTTT 59.992 36.000 0.00 0.00 38.84 1.94
87 88 4.511082 CCGTTTGCAACAAATCAGGATTTT 59.489 37.500 0.00 0.00 38.84 1.82
88 89 4.057432 CCGTTTGCAACAAATCAGGATTT 58.943 39.130 0.00 1.50 41.33 2.17
89 90 3.652274 CCGTTTGCAACAAATCAGGATT 58.348 40.909 0.00 0.00 0.00 3.01
90 91 2.610232 GCCGTTTGCAACAAATCAGGAT 60.610 45.455 0.00 0.00 40.77 3.24
91 92 1.269517 GCCGTTTGCAACAAATCAGGA 60.270 47.619 0.00 0.00 40.77 3.86
92 93 1.139163 GCCGTTTGCAACAAATCAGG 58.861 50.000 0.00 2.73 40.77 3.86
103 104 0.649993 CTTTTGTGGTTGCCGTTTGC 59.350 50.000 0.00 0.00 41.77 3.68
104 105 0.649993 GCTTTTGTGGTTGCCGTTTG 59.350 50.000 0.00 0.00 0.00 2.93
105 106 0.534873 AGCTTTTGTGGTTGCCGTTT 59.465 45.000 0.00 0.00 0.00 3.60
106 107 1.066454 GTAGCTTTTGTGGTTGCCGTT 59.934 47.619 0.00 0.00 0.00 4.44
107 108 0.666374 GTAGCTTTTGTGGTTGCCGT 59.334 50.000 0.00 0.00 0.00 5.68
108 109 0.951558 AGTAGCTTTTGTGGTTGCCG 59.048 50.000 0.00 0.00 0.00 5.69
109 110 1.602920 GCAGTAGCTTTTGTGGTTGCC 60.603 52.381 0.00 0.00 37.91 4.52
110 111 1.602920 GGCAGTAGCTTTTGTGGTTGC 60.603 52.381 0.00 0.00 41.70 4.17
111 112 1.334960 CGGCAGTAGCTTTTGTGGTTG 60.335 52.381 0.00 0.00 41.70 3.77
112 113 0.951558 CGGCAGTAGCTTTTGTGGTT 59.048 50.000 0.00 0.00 41.70 3.67
113 114 0.889186 CCGGCAGTAGCTTTTGTGGT 60.889 55.000 0.00 0.00 41.70 4.16
114 115 0.889186 ACCGGCAGTAGCTTTTGTGG 60.889 55.000 0.00 0.41 41.70 4.17
115 116 0.238289 CACCGGCAGTAGCTTTTGTG 59.762 55.000 0.00 0.00 41.70 3.33
116 117 0.107831 TCACCGGCAGTAGCTTTTGT 59.892 50.000 0.00 0.00 41.70 2.83
117 118 0.798776 CTCACCGGCAGTAGCTTTTG 59.201 55.000 0.00 0.00 41.70 2.44
118 119 0.396811 ACTCACCGGCAGTAGCTTTT 59.603 50.000 0.00 0.00 41.70 2.27
119 120 0.396811 AACTCACCGGCAGTAGCTTT 59.603 50.000 0.00 0.00 41.70 3.51
120 121 0.396811 AAACTCACCGGCAGTAGCTT 59.603 50.000 0.00 0.00 41.70 3.74
121 122 0.396811 AAAACTCACCGGCAGTAGCT 59.603 50.000 0.00 0.00 41.70 3.32
122 123 1.235724 AAAAACTCACCGGCAGTAGC 58.764 50.000 0.00 0.00 41.10 3.58
138 139 4.381825 CCCATCGCCATTGATGAAGAAAAA 60.382 41.667 5.35 0.00 46.98 1.94
139 140 3.130869 CCCATCGCCATTGATGAAGAAAA 59.869 43.478 5.35 0.00 46.98 2.29
140 141 2.689471 CCCATCGCCATTGATGAAGAAA 59.311 45.455 5.35 0.00 46.98 2.52
141 142 2.092484 TCCCATCGCCATTGATGAAGAA 60.092 45.455 5.35 0.00 46.98 2.52
142 143 1.490069 TCCCATCGCCATTGATGAAGA 59.510 47.619 5.35 0.00 46.98 2.87
143 144 1.971481 TCCCATCGCCATTGATGAAG 58.029 50.000 5.35 0.00 46.98 3.02
144 145 2.232399 CATCCCATCGCCATTGATGAA 58.768 47.619 5.35 0.00 46.98 2.57
145 146 1.546099 CCATCCCATCGCCATTGATGA 60.546 52.381 5.35 0.00 46.98 2.92
146 147 0.885879 CCATCCCATCGCCATTGATG 59.114 55.000 0.00 0.00 44.29 3.07
147 148 0.251474 CCCATCCCATCGCCATTGAT 60.251 55.000 0.00 0.00 0.00 2.57
148 149 1.151221 CCCATCCCATCGCCATTGA 59.849 57.895 0.00 0.00 0.00 2.57
149 150 0.251474 ATCCCATCCCATCGCCATTG 60.251 55.000 0.00 0.00 0.00 2.82
150 151 0.038744 GATCCCATCCCATCGCCATT 59.961 55.000 0.00 0.00 0.00 3.16
151 152 1.687612 GATCCCATCCCATCGCCAT 59.312 57.895 0.00 0.00 0.00 4.40
152 153 2.528818 GGATCCCATCCCATCGCCA 61.529 63.158 0.00 0.00 43.88 5.69
153 154 2.352805 GGATCCCATCCCATCGCC 59.647 66.667 0.00 0.00 43.88 5.54
161 162 4.511826 GTCGTAACAATTCAGGATCCCATC 59.488 45.833 8.55 0.00 0.00 3.51
162 163 4.451900 GTCGTAACAATTCAGGATCCCAT 58.548 43.478 8.55 0.00 0.00 4.00
163 164 3.370103 GGTCGTAACAATTCAGGATCCCA 60.370 47.826 8.55 0.00 0.00 4.37
164 165 3.203716 GGTCGTAACAATTCAGGATCCC 58.796 50.000 8.55 0.00 0.00 3.85
165 166 3.869065 TGGTCGTAACAATTCAGGATCC 58.131 45.455 2.48 2.48 0.00 3.36
166 167 4.693566 TGTTGGTCGTAACAATTCAGGATC 59.306 41.667 0.00 0.00 37.60 3.36
167 168 4.647611 TGTTGGTCGTAACAATTCAGGAT 58.352 39.130 0.00 0.00 37.60 3.24
168 169 4.074627 TGTTGGTCGTAACAATTCAGGA 57.925 40.909 0.00 0.00 37.60 3.86
169 170 4.822036 TTGTTGGTCGTAACAATTCAGG 57.178 40.909 9.94 0.00 43.46 3.86
175 176 0.656785 GCGGTTGTTGGTCGTAACAA 59.343 50.000 9.94 9.94 45.41 2.83
176 177 0.461516 TGCGGTTGTTGGTCGTAACA 60.462 50.000 0.00 0.00 38.69 2.41
177 178 0.656785 TTGCGGTTGTTGGTCGTAAC 59.343 50.000 0.00 0.00 0.00 2.50
178 179 1.376543 TTTGCGGTTGTTGGTCGTAA 58.623 45.000 0.00 0.00 0.00 3.18
179 180 1.331138 CTTTTGCGGTTGTTGGTCGTA 59.669 47.619 0.00 0.00 0.00 3.43
180 181 0.099791 CTTTTGCGGTTGTTGGTCGT 59.900 50.000 0.00 0.00 0.00 4.34
181 182 1.206115 GCTTTTGCGGTTGTTGGTCG 61.206 55.000 0.00 0.00 34.86 4.79
182 183 2.588731 GCTTTTGCGGTTGTTGGTC 58.411 52.632 0.00 0.00 34.86 4.02
183 184 4.825377 GCTTTTGCGGTTGTTGGT 57.175 50.000 0.00 0.00 34.86 3.67
194 195 5.526010 AAAATCGTCCGTAGTAGCTTTTG 57.474 39.130 0.00 0.00 0.00 2.44
218 219 1.000731 CCCTCGCCATTGAAGCAAAAA 59.999 47.619 0.00 0.00 0.00 1.94
219 220 0.602562 CCCTCGCCATTGAAGCAAAA 59.397 50.000 0.00 0.00 0.00 2.44
220 221 1.250154 CCCCTCGCCATTGAAGCAAA 61.250 55.000 0.00 0.00 0.00 3.68
221 222 1.678635 CCCCTCGCCATTGAAGCAA 60.679 57.895 0.00 0.00 0.00 3.91
222 223 2.045045 CCCCTCGCCATTGAAGCA 60.045 61.111 0.00 0.00 0.00 3.91
223 224 3.521796 GCCCCTCGCCATTGAAGC 61.522 66.667 0.00 0.00 0.00 3.86
224 225 3.204827 CGCCCCTCGCCATTGAAG 61.205 66.667 0.00 0.00 0.00 3.02
225 226 4.794648 CCGCCCCTCGCCATTGAA 62.795 66.667 0.00 0.00 36.73 2.69
227 228 4.794648 TTCCGCCCCTCGCCATTG 62.795 66.667 0.00 0.00 36.73 2.82
228 229 4.489771 CTTCCGCCCCTCGCCATT 62.490 66.667 0.00 0.00 36.73 3.16
231 232 4.525949 GTACTTCCGCCCCTCGCC 62.526 72.222 0.00 0.00 36.73 5.54
232 233 4.525949 GGTACTTCCGCCCCTCGC 62.526 72.222 0.00 0.00 36.73 5.03
550 551 2.125673 CCCTTCACCGCCTACACG 60.126 66.667 0.00 0.00 0.00 4.49
551 552 2.436115 GCCCTTCACCGCCTACAC 60.436 66.667 0.00 0.00 0.00 2.90
552 553 4.077184 CGCCCTTCACCGCCTACA 62.077 66.667 0.00 0.00 0.00 2.74
579 580 4.131596 GTTCTTGTAGTTGGTACTGGCAA 58.868 43.478 0.00 0.00 35.78 4.52
585 586 4.318546 CGCAACAGTTCTTGTAGTTGGTAC 60.319 45.833 0.00 0.00 39.73 3.34
586 587 3.805422 CGCAACAGTTCTTGTAGTTGGTA 59.195 43.478 0.00 0.00 39.73 3.25
588 589 2.869801 TCGCAACAGTTCTTGTAGTTGG 59.130 45.455 0.00 0.00 39.73 3.77
589 590 3.059597 CCTCGCAACAGTTCTTGTAGTTG 60.060 47.826 0.00 0.00 39.73 3.16
590 591 3.131396 CCTCGCAACAGTTCTTGTAGTT 58.869 45.455 0.00 0.00 39.73 2.24
591 592 2.548067 CCCTCGCAACAGTTCTTGTAGT 60.548 50.000 0.00 0.00 39.73 2.73
593 594 1.270625 CCCCTCGCAACAGTTCTTGTA 60.271 52.381 0.00 0.00 39.73 2.41
594 595 0.535102 CCCCTCGCAACAGTTCTTGT 60.535 55.000 0.00 0.00 43.45 3.16
595 596 0.535102 ACCCCTCGCAACAGTTCTTG 60.535 55.000 0.00 0.00 0.00 3.02
600 610 2.291043 CCCTACCCCTCGCAACAGT 61.291 63.158 0.00 0.00 0.00 3.55
604 614 3.072468 CGACCCTACCCCTCGCAA 61.072 66.667 0.00 0.00 0.00 4.85
640 651 4.214383 CTCTGCATTGCGTCGCCG 62.214 66.667 15.88 4.32 37.07 6.46
641 652 3.869272 CCTCTGCATTGCGTCGCC 61.869 66.667 15.88 0.00 0.00 5.54
643 654 1.135046 CTATCCTCTGCATTGCGTCG 58.865 55.000 3.84 0.00 0.00 5.12
644 655 2.231215 ACTATCCTCTGCATTGCGTC 57.769 50.000 3.84 0.00 0.00 5.19
645 656 2.543861 CGTACTATCCTCTGCATTGCGT 60.544 50.000 3.84 0.00 0.00 5.24
648 659 3.384668 CCACGTACTATCCTCTGCATTG 58.615 50.000 0.00 0.00 0.00 2.82
652 663 1.033574 AGCCACGTACTATCCTCTGC 58.966 55.000 0.00 0.00 0.00 4.26
653 664 5.455056 AAATAGCCACGTACTATCCTCTG 57.545 43.478 9.91 0.00 30.00 3.35
654 665 5.180868 CGTAAATAGCCACGTACTATCCTCT 59.819 44.000 9.91 1.12 33.56 3.69
655 666 5.388944 CGTAAATAGCCACGTACTATCCTC 58.611 45.833 9.91 4.42 33.56 3.71
656 667 4.217118 CCGTAAATAGCCACGTACTATCCT 59.783 45.833 9.91 4.86 36.44 3.24
657 668 4.479619 CCGTAAATAGCCACGTACTATCC 58.520 47.826 9.91 2.93 36.44 2.59
658 669 4.216257 TCCCGTAAATAGCCACGTACTATC 59.784 45.833 9.91 0.00 36.44 2.08
659 670 4.144297 TCCCGTAAATAGCCACGTACTAT 58.856 43.478 4.81 4.81 36.44 2.12
660 671 3.550820 TCCCGTAAATAGCCACGTACTA 58.449 45.455 0.00 0.00 36.44 1.82
661 672 2.360165 CTCCCGTAAATAGCCACGTACT 59.640 50.000 0.00 0.00 36.44 2.73
687 700 1.404391 TCGTCTTCCTTCTACCATCGC 59.596 52.381 0.00 0.00 0.00 4.58
689 702 3.025262 AGGTCGTCTTCCTTCTACCATC 58.975 50.000 0.00 0.00 30.18 3.51
707 720 9.357161 GTCATATATAATTAGATCCCTCGAGGT 57.643 37.037 29.25 12.84 36.75 3.85
710 723 9.709387 TTGGTCATATATAATTAGATCCCTCGA 57.291 33.333 0.00 0.00 0.00 4.04
732 750 6.900189 CGATCTACTCGTATGTCTTATTGGT 58.100 40.000 0.00 0.00 42.56 3.67
747 765 1.747355 TCCCAACCGTTCGATCTACTC 59.253 52.381 0.00 0.00 0.00 2.59
748 766 1.749634 CTCCCAACCGTTCGATCTACT 59.250 52.381 0.00 0.00 0.00 2.57
749 767 1.202382 CCTCCCAACCGTTCGATCTAC 60.202 57.143 0.00 0.00 0.00 2.59
771 790 1.584495 GCCAAAATTTCGACCGGCT 59.416 52.632 0.00 0.00 36.58 5.52
854 875 3.684788 GGCAAGTGCTTCTTCGATTCTTA 59.315 43.478 2.85 0.00 41.70 2.10
855 876 2.485814 GGCAAGTGCTTCTTCGATTCTT 59.514 45.455 2.85 0.00 41.70 2.52
1047 1072 3.068691 TGGGAAGCCGACGAGAGG 61.069 66.667 0.00 0.00 0.00 3.69
1065 1090 2.427753 GAGATGATGTCCCGGGCC 59.572 66.667 18.49 4.39 0.00 5.80
1578 1604 3.068881 CCGGTGGTGTCCATGACT 58.931 61.111 0.00 0.00 35.28 3.41
1726 1752 0.539051 CTGTAGCTCACCTCCTTGGG 59.461 60.000 0.00 0.00 41.11 4.12
1929 2049 3.357079 CACACCGGCAGGCTGTTC 61.357 66.667 17.16 8.07 42.76 3.18
2058 2178 3.120385 TGCGCCATCAGCACGAAG 61.120 61.111 4.18 0.00 44.04 3.79
2398 2524 6.060136 AGAACCATCATGAGTAATCACATGG 58.940 40.000 22.66 22.66 40.97 3.66
2477 2623 1.463674 AAGTTTTAGATGCCAGCCCG 58.536 50.000 0.00 0.00 0.00 6.13
2515 2994 5.450965 GCACTCTGCACATGCCTAAATTAAT 60.451 40.000 0.49 0.00 44.26 1.40
2517 2996 3.378112 GCACTCTGCACATGCCTAAATTA 59.622 43.478 0.49 0.00 44.26 1.40
2519 2998 1.747355 GCACTCTGCACATGCCTAAAT 59.253 47.619 0.49 0.00 44.26 1.40
2578 3250 6.026513 GTGCAAGATCTAGTTCTGCATTTTC 58.973 40.000 19.14 5.81 34.58 2.29
2607 3286 1.840635 GAGGCCCCTCACTGACTAAAT 59.159 52.381 9.42 0.00 42.31 1.40
2627 3306 4.747108 CACTCTAAACAGAACAGTGGAGTG 59.253 45.833 0.00 0.00 41.75 3.51
2628 3307 4.649674 TCACTCTAAACAGAACAGTGGAGT 59.350 41.667 0.00 0.00 36.04 3.85
2669 3348 8.970691 AATTCGTTGAATCACTTTCCTAATTG 57.029 30.769 0.00 0.00 30.29 2.32
2792 4976 4.398358 CACAACCTCTCATCTAACCGAGTA 59.602 45.833 0.00 0.00 0.00 2.59
2838 5022 6.636850 GTGTAATGGTTGCTTTGTTTGTAGAG 59.363 38.462 0.00 0.00 0.00 2.43
2842 5026 5.078411 TGTGTAATGGTTGCTTTGTTTGT 57.922 34.783 0.00 0.00 0.00 2.83
2863 5047 5.237996 CCTCAATGCCTCAACATACTGTATG 59.762 44.000 22.76 22.76 41.88 2.39
2866 5050 3.614092 CCTCAATGCCTCAACATACTGT 58.386 45.455 0.00 0.00 0.00 3.55
2867 5051 2.947652 CCCTCAATGCCTCAACATACTG 59.052 50.000 0.00 0.00 0.00 2.74
2904 5088 1.397672 CTCCTCGATCAGAGCAAGGA 58.602 55.000 0.00 0.00 45.54 3.36
2915 5100 4.021719 TCAAACTTACGTTTCCTCCTCGAT 60.022 41.667 0.00 0.00 41.23 3.59
2918 5103 5.177142 GTCTTCAAACTTACGTTTCCTCCTC 59.823 44.000 0.00 0.00 41.23 3.71
2919 5104 5.055144 GTCTTCAAACTTACGTTTCCTCCT 58.945 41.667 0.00 0.00 41.23 3.69
2920 5105 4.812626 TGTCTTCAAACTTACGTTTCCTCC 59.187 41.667 0.00 0.00 41.23 4.30
2934 5119 6.358974 TCTGATCTGTATGGTGTCTTCAAA 57.641 37.500 0.00 0.00 0.00 2.69
2960 5146 9.744468 GTGGAAGTGACAACAAATTAACTAAAT 57.256 29.630 0.00 0.00 0.00 1.40
2962 5148 8.282455 TGTGGAAGTGACAACAAATTAACTAA 57.718 30.769 0.00 0.00 0.00 2.24
2964 5150 6.680378 GCTGTGGAAGTGACAACAAATTAACT 60.680 38.462 0.00 0.00 0.00 2.24
2984 5213 4.503714 TCCTCCCCTAAATAAAGCTGTG 57.496 45.455 0.00 0.00 0.00 3.66
3064 5293 2.026915 GCATCAGCTTTCCCCCAATTTT 60.027 45.455 0.00 0.00 37.91 1.82
3070 5299 2.044946 ACGCATCAGCTTTCCCCC 60.045 61.111 0.00 0.00 39.10 5.40
3072 5301 0.598065 AAACACGCATCAGCTTTCCC 59.402 50.000 0.00 0.00 39.10 3.97
3073 5302 2.422276 AAAACACGCATCAGCTTTCC 57.578 45.000 0.00 0.00 39.10 3.13
3160 5390 3.270877 ACGGAAGATACATTGGCAAGAC 58.729 45.455 5.96 0.00 0.00 3.01
3180 5410 5.163550 GGGGCTGATAGTAAACCAAATCAAC 60.164 44.000 0.00 0.00 0.00 3.18
3187 5417 0.834612 CCGGGGCTGATAGTAAACCA 59.165 55.000 0.00 0.00 0.00 3.67
3194 5424 2.111878 CCTTGCCGGGGCTGATAG 59.888 66.667 11.55 3.44 42.51 2.08
3374 5613 4.061596 GAGCCCTTTCTATTCCAGAATCG 58.938 47.826 0.00 0.00 42.88 3.34
3403 5642 0.887836 CATCAGGGTGGGCATCATCG 60.888 60.000 0.00 0.00 0.00 3.84
3442 5681 7.015682 TCCTTTGTCCCTTCTGATATGATCTAC 59.984 40.741 0.00 0.00 0.00 2.59
3443 5682 7.075797 TCCTTTGTCCCTTCTGATATGATCTA 58.924 38.462 0.00 0.00 0.00 1.98
3444 5683 5.907662 TCCTTTGTCCCTTCTGATATGATCT 59.092 40.000 0.00 0.00 0.00 2.75
3446 5685 5.072872 CCTCCTTTGTCCCTTCTGATATGAT 59.927 44.000 0.00 0.00 0.00 2.45
3447 5686 4.410228 CCTCCTTTGTCCCTTCTGATATGA 59.590 45.833 0.00 0.00 0.00 2.15
3449 5688 4.375313 ACCTCCTTTGTCCCTTCTGATAT 58.625 43.478 0.00 0.00 0.00 1.63
3451 5690 2.637165 ACCTCCTTTGTCCCTTCTGAT 58.363 47.619 0.00 0.00 0.00 2.90
3459 5707 3.983044 ACAGATGTACCTCCTTTGTCC 57.017 47.619 0.00 0.00 0.00 4.02
3493 5746 1.128809 TACCCCTTGCAGAACGGGAA 61.129 55.000 14.40 1.49 40.55 3.97
3501 5754 0.110486 ACCAACTGTACCCCTTGCAG 59.890 55.000 0.00 0.00 43.34 4.41
3519 5780 2.172293 AGCATGGAGATTCTCTTCCCAC 59.828 50.000 13.22 0.00 0.00 4.61
3522 5783 6.352016 TGTATAGCATGGAGATTCTCTTCC 57.648 41.667 13.22 0.00 0.00 3.46
3538 5806 6.923508 GCTTAAAATTTGTCCCCATGTATAGC 59.076 38.462 0.00 0.00 0.00 2.97
3571 5839 2.617274 GGGCCTAATCGCATTCGGC 61.617 63.158 0.84 12.81 46.92 5.54
3573 5841 0.817634 TTGGGGCCTAATCGCATTCG 60.818 55.000 0.84 0.00 0.00 3.34
3590 5858 3.118738 AGAGGGAGTACGGTAAGCATTTG 60.119 47.826 0.00 0.00 0.00 2.32
3594 5862 3.220110 CATAGAGGGAGTACGGTAAGCA 58.780 50.000 0.00 0.00 0.00 3.91
3597 5865 3.589951 AGCATAGAGGGAGTACGGTAA 57.410 47.619 0.00 0.00 0.00 2.85
3601 5869 5.761234 GGAGATATAGCATAGAGGGAGTACG 59.239 48.000 0.00 0.00 0.00 3.67
3602 5870 6.544564 GTGGAGATATAGCATAGAGGGAGTAC 59.455 46.154 0.00 0.00 0.00 2.73
3603 5871 6.632900 CGTGGAGATATAGCATAGAGGGAGTA 60.633 46.154 0.00 0.00 0.00 2.59
3604 5872 5.515106 GTGGAGATATAGCATAGAGGGAGT 58.485 45.833 0.00 0.00 0.00 3.85
3605 5873 4.578516 CGTGGAGATATAGCATAGAGGGAG 59.421 50.000 0.00 0.00 0.00 4.30
3606 5874 4.018324 ACGTGGAGATATAGCATAGAGGGA 60.018 45.833 0.00 0.00 0.00 4.20
3608 5876 5.880887 TGTACGTGGAGATATAGCATAGAGG 59.119 44.000 0.00 0.00 0.00 3.69
3609 5877 6.986904 TGTACGTGGAGATATAGCATAGAG 57.013 41.667 0.00 0.00 0.00 2.43
3611 5879 7.594714 ACTTTGTACGTGGAGATATAGCATAG 58.405 38.462 0.00 0.00 0.00 2.23
3612 5880 7.520451 ACTTTGTACGTGGAGATATAGCATA 57.480 36.000 0.00 0.00 0.00 3.14
3613 5881 6.406692 ACTTTGTACGTGGAGATATAGCAT 57.593 37.500 0.00 0.00 0.00 3.79
3614 5882 5.847111 ACTTTGTACGTGGAGATATAGCA 57.153 39.130 0.00 0.00 0.00 3.49
3615 5883 6.856938 CACTACTTTGTACGTGGAGATATAGC 59.143 42.308 0.00 0.00 0.00 2.97
3617 5885 7.870509 ACACTACTTTGTACGTGGAGATATA 57.129 36.000 0.00 0.00 0.00 0.86
3618 5886 6.770746 ACACTACTTTGTACGTGGAGATAT 57.229 37.500 0.00 0.00 0.00 1.63
3619 5887 7.076842 GTACACTACTTTGTACGTGGAGATA 57.923 40.000 0.00 0.00 41.79 1.98
3620 5888 5.947443 GTACACTACTTTGTACGTGGAGAT 58.053 41.667 0.00 0.00 41.79 2.75
3621 5889 5.362556 GTACACTACTTTGTACGTGGAGA 57.637 43.478 0.00 0.00 41.79 3.71
3629 5897 5.066375 ACGCGGATATGTACACTACTTTGTA 59.934 40.000 12.47 0.00 0.00 2.41
3630 5898 4.142315 ACGCGGATATGTACACTACTTTGT 60.142 41.667 12.47 0.00 0.00 2.83
3631 5899 4.206404 CACGCGGATATGTACACTACTTTG 59.794 45.833 12.47 0.00 0.00 2.77
3632 5900 4.357142 CACGCGGATATGTACACTACTTT 58.643 43.478 12.47 0.00 0.00 2.66
3633 5901 3.794475 GCACGCGGATATGTACACTACTT 60.794 47.826 12.47 0.00 0.00 2.24
3634 5902 2.287427 GCACGCGGATATGTACACTACT 60.287 50.000 12.47 0.00 0.00 2.57
3635 5903 2.049228 GCACGCGGATATGTACACTAC 58.951 52.381 12.47 0.00 0.00 2.73
3636 5904 1.334329 CGCACGCGGATATGTACACTA 60.334 52.381 12.47 0.00 35.56 2.74
3637 5905 0.594028 CGCACGCGGATATGTACACT 60.594 55.000 12.47 0.00 35.56 3.55
3638 5906 0.868602 ACGCACGCGGATATGTACAC 60.869 55.000 16.70 0.00 44.69 2.90
3639 5907 0.868177 CACGCACGCGGATATGTACA 60.868 55.000 16.70 0.00 44.69 2.90
3640 5908 1.844003 CACGCACGCGGATATGTAC 59.156 57.895 16.70 0.00 44.69 2.90
3641 5909 1.947146 GCACGCACGCGGATATGTA 60.947 57.895 16.70 0.00 44.69 2.29
3642 5910 3.261951 GCACGCACGCGGATATGT 61.262 61.111 16.70 0.00 44.69 2.29
3643 5911 2.961721 AGCACGCACGCGGATATG 60.962 61.111 16.70 5.90 44.69 1.78
3644 5912 2.961721 CAGCACGCACGCGGATAT 60.962 61.111 16.70 0.00 44.69 1.63
3645 5913 4.429212 ACAGCACGCACGCGGATA 62.429 61.111 16.70 0.00 44.69 2.59
3651 5919 3.862063 GAAAGCCACAGCACGCACG 62.862 63.158 0.00 0.00 43.56 5.34
3652 5920 2.050985 GAAAGCCACAGCACGCAC 60.051 61.111 0.00 0.00 43.56 5.34
3653 5921 2.515757 TGAAAGCCACAGCACGCA 60.516 55.556 0.00 0.00 43.56 5.24
3654 5922 1.580845 ATCTGAAAGCCACAGCACGC 61.581 55.000 0.00 0.00 43.56 5.34
3655 5923 0.445436 GATCTGAAAGCCACAGCACG 59.555 55.000 0.00 0.00 43.56 5.34
3707 5975 0.392461 GCCATACTTCCGTTGGAGCA 60.392 55.000 0.00 0.00 31.21 4.26
3762 6030 1.423794 GGGACTTGGGGTGGACTCAA 61.424 60.000 0.00 0.00 0.00 3.02
3763 6031 1.846124 GGGACTTGGGGTGGACTCA 60.846 63.158 0.00 0.00 0.00 3.41
3764 6032 2.603652 GGGGACTTGGGGTGGACTC 61.604 68.421 0.00 0.00 0.00 3.36
3765 6033 2.531942 GGGGACTTGGGGTGGACT 60.532 66.667 0.00 0.00 0.00 3.85
3766 6034 2.426305 CTTGGGGACTTGGGGTGGAC 62.426 65.000 0.00 0.00 0.00 4.02
3767 6035 2.038221 TTGGGGACTTGGGGTGGA 60.038 61.111 0.00 0.00 0.00 4.02
3768 6036 2.440599 CTTGGGGACTTGGGGTGG 59.559 66.667 0.00 0.00 0.00 4.61
3770 6038 2.371897 CTTGCTTGGGGACTTGGGGT 62.372 60.000 0.00 0.00 0.00 4.95
3771 6039 1.607467 CTTGCTTGGGGACTTGGGG 60.607 63.158 0.00 0.00 0.00 4.96
3772 6040 2.278330 GCTTGCTTGGGGACTTGGG 61.278 63.158 0.00 0.00 0.00 4.12
3773 6041 1.530013 CTGCTTGCTTGGGGACTTGG 61.530 60.000 0.00 0.00 0.00 3.61
3774 6042 1.962144 CTGCTTGCTTGGGGACTTG 59.038 57.895 0.00 0.00 0.00 3.16
3775 6043 1.905354 GCTGCTTGCTTGGGGACTT 60.905 57.895 0.00 0.00 38.95 3.01
3776 6044 2.282745 GCTGCTTGCTTGGGGACT 60.283 61.111 0.00 0.00 38.95 3.85
3809 6077 0.911525 TTCCTCTTCCCTGGAGCTGG 60.912 60.000 0.00 0.00 33.46 4.85
3810 6078 0.540923 CTTCCTCTTCCCTGGAGCTG 59.459 60.000 0.00 0.00 33.46 4.24
3842 6113 0.941463 GGAGTGTATGATCGCGCTGG 60.941 60.000 5.56 0.00 0.00 4.85
3849 6120 2.224161 GGTGCAGGAGGAGTGTATGATC 60.224 54.545 0.00 0.00 0.00 2.92
3855 6126 1.766059 TGTGGTGCAGGAGGAGTGT 60.766 57.895 0.00 0.00 0.00 3.55
3858 6129 1.004080 CTGTGTGGTGCAGGAGGAG 60.004 63.158 0.00 0.00 0.00 3.69
3859 6130 3.150949 CTGTGTGGTGCAGGAGGA 58.849 61.111 0.00 0.00 0.00 3.71
3861 6132 3.046087 CGCTGTGTGGTGCAGGAG 61.046 66.667 0.00 0.00 34.73 3.69
3866 6137 4.612536 GTGTGCGCTGTGTGGTGC 62.613 66.667 9.73 0.00 42.34 5.01
3877 6164 1.080569 GGCCATTTTCAGGTGTGCG 60.081 57.895 0.00 0.00 0.00 5.34
3918 6212 1.297664 CTGCTGCTAATCTGTCAGGC 58.702 55.000 0.00 0.00 0.00 4.85
3963 6257 2.752358 CAGCAGGGCCAACTCTGA 59.248 61.111 6.18 0.00 33.11 3.27
4069 6366 2.457366 ACACGAAATCGCTTCTTCCT 57.543 45.000 2.15 0.00 44.43 3.36
4071 6368 2.234187 GCAACACGAAATCGCTTCTTC 58.766 47.619 2.15 0.00 44.43 2.87
4114 6411 2.755655 TGGACTTGGCTCGTTTCAAAAA 59.244 40.909 0.00 0.00 0.00 1.94
4115 6412 2.370349 TGGACTTGGCTCGTTTCAAAA 58.630 42.857 0.00 0.00 0.00 2.44
4116 6413 2.045561 TGGACTTGGCTCGTTTCAAA 57.954 45.000 0.00 0.00 0.00 2.69
4117 6414 2.045561 TTGGACTTGGCTCGTTTCAA 57.954 45.000 0.00 0.00 0.00 2.69
4118 6415 2.045561 TTTGGACTTGGCTCGTTTCA 57.954 45.000 0.00 0.00 0.00 2.69
4120 6417 4.825085 TCTAAATTTGGACTTGGCTCGTTT 59.175 37.500 0.00 0.00 0.00 3.60
4122 6419 4.003648 CTCTAAATTTGGACTTGGCTCGT 58.996 43.478 0.00 0.00 0.00 4.18
4124 6421 5.003804 TCACTCTAAATTTGGACTTGGCTC 58.996 41.667 0.00 0.00 0.00 4.70
4125 6422 4.985538 TCACTCTAAATTTGGACTTGGCT 58.014 39.130 0.00 0.00 0.00 4.75
4126 6423 4.156739 CCTCACTCTAAATTTGGACTTGGC 59.843 45.833 0.00 0.00 0.00 4.52
4128 6425 5.765182 ACACCTCACTCTAAATTTGGACTTG 59.235 40.000 0.00 1.66 0.00 3.16
4129 6426 5.941788 ACACCTCACTCTAAATTTGGACTT 58.058 37.500 0.00 0.00 0.00 3.01
4130 6427 5.308237 AGACACCTCACTCTAAATTTGGACT 59.692 40.000 0.00 0.00 0.00 3.85
4131 6428 5.552178 AGACACCTCACTCTAAATTTGGAC 58.448 41.667 0.00 0.00 0.00 4.02
4132 6429 5.280011 GGAGACACCTCACTCTAAATTTGGA 60.280 44.000 4.04 4.04 41.20 3.53
4133 6430 4.938226 GGAGACACCTCACTCTAAATTTGG 59.062 45.833 0.00 0.00 41.20 3.28
4134 6431 4.627467 CGGAGACACCTCACTCTAAATTTG 59.373 45.833 0.00 0.00 41.20 2.32
4136 6433 3.833070 ACGGAGACACCTCACTCTAAATT 59.167 43.478 0.00 0.00 41.20 1.82
4137 6434 3.432378 ACGGAGACACCTCACTCTAAAT 58.568 45.455 0.00 0.00 41.20 1.40
4139 6436 2.557056 CAACGGAGACACCTCACTCTAA 59.443 50.000 0.00 0.00 41.20 2.10
4140 6437 2.160205 CAACGGAGACACCTCACTCTA 58.840 52.381 0.00 0.00 41.20 2.43
4141 6438 0.962489 CAACGGAGACACCTCACTCT 59.038 55.000 0.00 0.00 41.20 3.24
4142 6439 0.674534 ACAACGGAGACACCTCACTC 59.325 55.000 0.00 0.00 41.20 3.51
4143 6440 0.389391 CACAACGGAGACACCTCACT 59.611 55.000 0.00 0.00 41.20 3.41
4144 6441 1.222115 GCACAACGGAGACACCTCAC 61.222 60.000 0.00 0.00 41.20 3.51
4145 6442 1.069090 GCACAACGGAGACACCTCA 59.931 57.895 0.00 0.00 41.20 3.86
4146 6443 1.668151 GGCACAACGGAGACACCTC 60.668 63.158 0.00 0.00 38.70 3.85
4161 6477 6.717997 TCACCAAATATATACTCTACTCGGCA 59.282 38.462 0.00 0.00 0.00 5.69
4170 6486 6.093219 CAGGCAGCATCACCAAATATATACTC 59.907 42.308 0.00 0.00 0.00 2.59
4171 6487 5.942236 CAGGCAGCATCACCAAATATATACT 59.058 40.000 0.00 0.00 0.00 2.12
4172 6488 5.707298 ACAGGCAGCATCACCAAATATATAC 59.293 40.000 0.00 0.00 0.00 1.47
4173 6489 5.879763 ACAGGCAGCATCACCAAATATATA 58.120 37.500 0.00 0.00 0.00 0.86
4174 6490 4.733165 ACAGGCAGCATCACCAAATATAT 58.267 39.130 0.00 0.00 0.00 0.86
4198 6520 1.153489 CCTCACGGCATCTGGACTG 60.153 63.158 0.00 0.00 0.00 3.51
4279 6603 3.714798 ACACCCCACACCTACCATATTAG 59.285 47.826 0.00 0.00 0.00 1.73
4339 6663 7.634429 GCATCATTCATCAGGCATATACCTAGA 60.634 40.741 0.00 0.00 38.26 2.43
4353 6679 6.448207 TTTTCGGTAATGCATCATTCATCA 57.552 33.333 0.00 0.00 35.54 3.07
4365 6691 6.826741 TCCTTTCTCCCTTATTTTCGGTAATG 59.173 38.462 0.00 0.00 0.00 1.90
4366 6692 6.965607 TCCTTTCTCCCTTATTTTCGGTAAT 58.034 36.000 0.00 0.00 0.00 1.89
4367 6693 6.377245 TCCTTTCTCCCTTATTTTCGGTAA 57.623 37.500 0.00 0.00 0.00 2.85
4376 6705 1.847088 GTGGCCTCCTTTCTCCCTTAT 59.153 52.381 3.32 0.00 0.00 1.73
4396 6725 0.387878 GACAGAGACACAGAGTGCCG 60.388 60.000 0.00 0.00 36.98 5.69
4407 6736 5.163602 ACTGAATCTAATGTCGGACAGAGAC 60.164 44.000 21.25 13.49 38.98 3.36
4409 6738 5.255710 ACTGAATCTAATGTCGGACAGAG 57.744 43.478 16.84 15.13 0.00 3.35
4416 6745 4.201851 CCTTGGCAACTGAATCTAATGTCG 60.202 45.833 0.00 0.00 37.61 4.35
4481 7015 2.236146 AGTGGTGGCAACGATCAATAGA 59.764 45.455 0.00 0.00 42.51 1.98
4485 7019 2.422597 CTTAGTGGTGGCAACGATCAA 58.577 47.619 0.00 0.00 42.51 2.57
4585 7155 1.607251 CGAAGTAAAGGCCGGTCTGTT 60.607 52.381 10.71 9.09 0.00 3.16
4632 7212 1.614711 CAAGGGGCTCCATGGCTAA 59.385 57.895 4.79 0.00 41.48 3.09
4677 7258 2.928396 AGGTCCGGGGTCCTGTTG 60.928 66.667 0.00 0.00 32.68 3.33
4717 7298 2.597340 CATGCCCCCACCAGGTAG 59.403 66.667 0.00 0.00 0.00 3.18
4718 7299 3.020647 CCATGCCCCCACCAGGTA 61.021 66.667 0.00 0.00 0.00 3.08
4761 7342 1.746470 TGCTTGCAGATCACTGGATG 58.254 50.000 0.00 0.00 43.47 3.51
4788 7369 7.051000 TCCGAATGGTTTACATCATCATTACA 58.949 34.615 0.00 0.00 39.40 2.41
4789 7370 7.490962 TCCGAATGGTTTACATCATCATTAC 57.509 36.000 0.00 0.00 39.40 1.89
4790 7371 8.567104 CATTCCGAATGGTTTACATCATCATTA 58.433 33.333 12.62 0.00 39.40 1.90
4791 7372 7.068593 ACATTCCGAATGGTTTACATCATCATT 59.931 33.333 22.24 0.00 43.21 2.57
4792 7373 6.547141 ACATTCCGAATGGTTTACATCATCAT 59.453 34.615 22.24 0.00 43.21 2.45
4793 7374 5.885352 ACATTCCGAATGGTTTACATCATCA 59.115 36.000 22.24 0.00 43.21 3.07
4794 7375 6.377327 ACATTCCGAATGGTTTACATCATC 57.623 37.500 22.24 0.00 43.21 2.92
4795 7376 6.773976 AACATTCCGAATGGTTTACATCAT 57.226 33.333 22.24 0.00 43.21 2.45
4796 7377 7.873719 ATAACATTCCGAATGGTTTACATCA 57.126 32.000 22.24 2.53 43.21 3.07
4835 7416 2.953466 TTGCACGTAGGGCTAACTAG 57.047 50.000 0.00 0.00 0.00 2.57
4836 7417 3.681593 TTTTGCACGTAGGGCTAACTA 57.318 42.857 0.00 0.00 0.00 2.24
4837 7418 2.554370 TTTTGCACGTAGGGCTAACT 57.446 45.000 0.00 0.00 0.00 2.24
4838 7419 3.189702 TCATTTTTGCACGTAGGGCTAAC 59.810 43.478 0.00 0.00 0.00 2.34
4839 7420 3.413327 TCATTTTTGCACGTAGGGCTAA 58.587 40.909 0.00 0.00 0.00 3.09
4841 7422 1.904287 TCATTTTTGCACGTAGGGCT 58.096 45.000 0.00 0.00 0.00 5.19
4842 7423 2.715737 TTCATTTTTGCACGTAGGGC 57.284 45.000 0.00 0.00 0.00 5.19
4843 7424 6.386654 AGTATTTTCATTTTTGCACGTAGGG 58.613 36.000 0.00 0.00 0.00 3.53
4845 7426 8.837059 GTGTAGTATTTTCATTTTTGCACGTAG 58.163 33.333 0.00 0.00 0.00 3.51
4846 7427 8.343366 TGTGTAGTATTTTCATTTTTGCACGTA 58.657 29.630 0.00 0.00 0.00 3.57
4847 7428 7.197017 TGTGTAGTATTTTCATTTTTGCACGT 58.803 30.769 0.00 0.00 0.00 4.49
4848 7429 7.616103 TGTGTAGTATTTTCATTTTTGCACG 57.384 32.000 0.00 0.00 0.00 5.34
4849 7430 8.272866 GGTTGTGTAGTATTTTCATTTTTGCAC 58.727 33.333 0.00 0.00 0.00 4.57
4850 7431 7.981789 TGGTTGTGTAGTATTTTCATTTTTGCA 59.018 29.630 0.00 0.00 0.00 4.08
4851 7432 8.359060 TGGTTGTGTAGTATTTTCATTTTTGC 57.641 30.769 0.00 0.00 0.00 3.68
4855 7436 9.691362 GACATTGGTTGTGTAGTATTTTCATTT 57.309 29.630 0.00 0.00 39.18 2.32
4856 7437 8.855110 TGACATTGGTTGTGTAGTATTTTCATT 58.145 29.630 0.00 0.00 39.18 2.57
4857 7438 8.402798 TGACATTGGTTGTGTAGTATTTTCAT 57.597 30.769 0.00 0.00 39.18 2.57
4858 7439 7.717436 TCTGACATTGGTTGTGTAGTATTTTCA 59.283 33.333 0.00 0.00 39.18 2.69
4859 7440 8.094798 TCTGACATTGGTTGTGTAGTATTTTC 57.905 34.615 0.00 0.00 39.18 2.29
4900 7505 9.339850 GGTCTTCTGTACTGTACTATCTGATAA 57.660 37.037 17.98 0.00 0.00 1.75
4904 7509 6.374613 TGTGGTCTTCTGTACTGTACTATCTG 59.625 42.308 17.98 6.03 0.00 2.90
4945 7553 3.135712 TGCTACTGGTTCACTTTTCTGGA 59.864 43.478 0.00 0.00 0.00 3.86
4962 7571 4.681835 TCTAGTGAACGAACTCTGCTAC 57.318 45.455 0.00 0.00 0.00 3.58
4970 7579 3.365220 GTGAGTGCATCTAGTGAACGAAC 59.635 47.826 0.00 0.00 41.66 3.95
4971 7580 3.575630 GTGAGTGCATCTAGTGAACGAA 58.424 45.455 0.00 0.00 41.66 3.85
4972 7581 2.094700 GGTGAGTGCATCTAGTGAACGA 60.095 50.000 0.00 0.00 41.66 3.85
4988 7597 2.416027 CGACACACAGACATAGGGTGAG 60.416 54.545 2.19 0.00 36.42 3.51
4992 7601 4.855715 ATATCGACACACAGACATAGGG 57.144 45.455 0.00 0.00 0.00 3.53
5047 7664 6.423905 TGAGAATATTGCGAACCTAGCATAAC 59.576 38.462 0.00 0.00 44.74 1.89
5053 7670 4.371786 TGCTGAGAATATTGCGAACCTAG 58.628 43.478 0.00 0.00 0.00 3.02
5055 7672 3.201290 CTGCTGAGAATATTGCGAACCT 58.799 45.455 0.00 0.00 0.00 3.50
5056 7673 2.286654 GCTGCTGAGAATATTGCGAACC 60.287 50.000 0.00 0.00 0.00 3.62
5066 7683 3.280295 CATTTGGAGAGCTGCTGAGAAT 58.720 45.455 7.01 0.00 0.00 2.40
5097 7979 0.766752 TGATGATGGACATGGCCGAT 59.233 50.000 14.43 7.72 39.56 4.18
5100 7982 2.381911 AGTTTGATGATGGACATGGCC 58.618 47.619 12.04 12.04 39.56 5.36
5208 8099 9.559958 GAAAATCACGATTTAGTTTGATCATGT 57.440 29.630 5.48 0.00 39.88 3.21
5248 8142 3.181474 GCCTTCTTATCGGACTTGCTAGT 60.181 47.826 0.00 0.00 37.31 2.57
5274 8168 4.249661 TCACAGCGACTGCAATTATAACA 58.750 39.130 6.74 0.00 46.23 2.41
5373 8267 8.562892 CACATAGATCATTTGGAATTACCTGAC 58.437 37.037 0.00 0.00 39.86 3.51
5405 8299 9.660180 AGGTAATGTTCTTCTTATCTGAAAGTC 57.340 33.333 0.00 0.00 33.76 3.01
5446 8340 7.667635 AGCAAATAAGAGGTTAGCTCTTCTTTT 59.332 33.333 26.87 22.68 41.00 2.27
5453 8361 5.819901 ACATCAGCAAATAAGAGGTTAGCTC 59.180 40.000 2.85 2.85 0.00 4.09
5455 8363 5.586243 TGACATCAGCAAATAAGAGGTTAGC 59.414 40.000 0.00 0.00 0.00 3.09
5458 8366 7.177216 TGAAATGACATCAGCAAATAAGAGGTT 59.823 33.333 0.00 0.00 0.00 3.50
5484 8392 7.067494 GGTGCTCCTACTGAAACATCATATTTT 59.933 37.037 0.00 0.00 0.00 1.82
5486 8394 6.058183 GGTGCTCCTACTGAAACATCATATT 58.942 40.000 0.00 0.00 0.00 1.28
5487 8395 5.130975 TGGTGCTCCTACTGAAACATCATAT 59.869 40.000 6.34 0.00 34.23 1.78
5628 8536 4.346129 CAAGCTTGTTGTCAGTTGAGAAC 58.654 43.478 18.65 13.45 45.29 3.01
5649 8557 2.589157 CCCGTAGCCACCTTCACCA 61.589 63.158 0.00 0.00 0.00 4.17
5664 8572 0.175073 GTACCTTGTAGACTGGCCCG 59.825 60.000 0.00 0.00 0.00 6.13
5673 8581 8.771766 GTCCTTAAAAACTTCAGTACCTTGTAG 58.228 37.037 0.00 0.00 0.00 2.74
5693 8601 7.707624 TTCGAAACTACTAATGGAGTCCTTA 57.292 36.000 11.33 5.90 39.81 2.69
5696 8604 6.161381 TGTTTCGAAACTACTAATGGAGTCC 58.839 40.000 33.94 0.73 39.59 3.85
5697 8605 7.829378 ATGTTTCGAAACTACTAATGGAGTC 57.171 36.000 33.94 9.88 39.59 3.36
5700 8608 6.373216 CCCAATGTTTCGAAACTACTAATGGA 59.627 38.462 33.94 16.29 39.59 3.41
5701 8609 6.150474 ACCCAATGTTTCGAAACTACTAATGG 59.850 38.462 33.94 28.09 39.59 3.16
5718 8628 3.417101 TGAAGTTGCGATTACCCAATGT 58.583 40.909 0.00 0.00 0.00 2.71
5722 8632 1.349688 ACCTGAAGTTGCGATTACCCA 59.650 47.619 0.00 0.00 0.00 4.51
5726 8636 2.742053 GCAAGACCTGAAGTTGCGATTA 59.258 45.455 0.00 0.00 37.44 1.75
5732 8642 4.096984 ACTTCTTTGCAAGACCTGAAGTTG 59.903 41.667 18.80 6.71 40.46 3.16
5733 8643 4.273318 ACTTCTTTGCAAGACCTGAAGTT 58.727 39.130 18.80 10.00 40.46 2.66
5738 8648 6.801539 TGTTATACTTCTTTGCAAGACCTG 57.198 37.500 0.00 0.00 37.23 4.00
5806 8716 9.534565 GTGTGAGACTGCTCTATATTATGAAAA 57.465 33.333 0.00 0.00 41.84 2.29
5807 8717 7.862873 CGTGTGAGACTGCTCTATATTATGAAA 59.137 37.037 0.00 0.00 41.84 2.69
5809 8719 6.486993 ACGTGTGAGACTGCTCTATATTATGA 59.513 38.462 0.00 0.00 41.84 2.15
5810 8720 6.673106 ACGTGTGAGACTGCTCTATATTATG 58.327 40.000 0.00 0.00 41.84 1.90
5811 8721 6.712998 AGACGTGTGAGACTGCTCTATATTAT 59.287 38.462 0.00 0.00 41.84 1.28
5821 8731 1.989165 GAATCAGACGTGTGAGACTGC 59.011 52.381 20.76 0.00 0.00 4.40
5824 8734 5.597813 ATTTTGAATCAGACGTGTGAGAC 57.402 39.130 20.76 16.10 0.00 3.36
6081 9022 2.169832 TGCTCACAGAGGTTAAGTGC 57.830 50.000 0.00 0.00 33.44 4.40
6116 9063 8.383175 AGGTAAATCAGTATCTGTTCTTTGGAA 58.617 33.333 0.00 0.00 32.61 3.53
6169 9118 2.819608 GTTTGCCAGTCCAGAAGCATAA 59.180 45.455 0.00 0.00 34.72 1.90
6179 9128 1.673337 GTACCGGGTTTGCCAGTCC 60.673 63.158 4.31 0.00 36.17 3.85
6248 9197 6.125327 TCTCTGTGAACGATTCTGTATCTC 57.875 41.667 0.00 0.00 0.00 2.75
6263 9212 3.575687 TGCTTGTCTTGAGATCTCTGTGA 59.424 43.478 22.95 14.67 0.00 3.58
6272 9221 4.067896 GGAGAATGTTGCTTGTCTTGAGA 58.932 43.478 0.00 0.00 0.00 3.27
6392 9341 9.683069 ATTGAATTGCTTGTTGAAACTTACTAG 57.317 29.630 0.00 0.00 0.00 2.57
6533 9501 2.668280 GCCGAAGCTGAACACGTCC 61.668 63.158 0.00 0.00 35.50 4.79
6670 9639 4.461198 TCAGAGATAGTGGCGAGACATTA 58.539 43.478 0.00 0.00 0.00 1.90
6679 9648 5.528043 TTCAGAGATTCAGAGATAGTGGC 57.472 43.478 0.00 0.00 0.00 5.01
6730 9699 3.525800 AGCTCCACACCTGGTAAAAAT 57.474 42.857 0.00 0.00 38.90 1.82
6797 9767 3.378331 CTCCGACTCGAACGTCCCG 62.378 68.421 0.00 4.20 0.00 5.14
7072 10042 8.140677 ACACAAATTACCAAAACAATGACATG 57.859 30.769 0.00 0.00 0.00 3.21
7089 10060 6.824305 AATCAGTGCTAAGCTACACAAATT 57.176 33.333 14.65 10.80 39.30 1.82
7095 10066 5.530915 ACAACAAAATCAGTGCTAAGCTACA 59.469 36.000 0.00 0.00 0.00 2.74
7574 10591 1.338484 TGATGCTCTTCACTGGTCAGC 60.338 52.381 0.00 0.00 0.00 4.26
7581 10598 3.977134 AGTGACATGATGCTCTTCACT 57.023 42.857 9.74 9.74 41.63 3.41
7626 10643 7.887381 TGTAACGTCACCCATTTTATCAAATT 58.113 30.769 0.00 0.00 29.41 1.82
7642 10659 7.499321 AAACATTTTCCACTATGTAACGTCA 57.501 32.000 0.00 0.00 34.04 4.35
7655 10672 7.124147 AGAGTTTGGAGAGAAAAACATTTTCCA 59.876 33.333 10.96 1.87 38.48 3.53
7658 10675 8.932945 GAAGAGTTTGGAGAGAAAAACATTTT 57.067 30.769 0.00 0.00 38.48 1.82
7927 10944 3.827898 CAGAGGTCCGCCCGAGTC 61.828 72.222 0.00 0.00 38.74 3.36
7953 10970 4.475135 GAGGAGGGGTGCTTCGGC 62.475 72.222 0.00 0.00 42.19 5.54
7954 10971 3.787001 GGAGGAGGGGTGCTTCGG 61.787 72.222 0.00 0.00 0.00 4.30
7955 10972 3.787001 GGGAGGAGGGGTGCTTCG 61.787 72.222 0.00 0.00 0.00 3.79
7956 10973 3.412408 GGGGAGGAGGGGTGCTTC 61.412 72.222 0.00 0.00 0.00 3.86
7960 10977 2.692741 GAAGGGGGAGGAGGGGTG 60.693 72.222 0.00 0.00 0.00 4.61
7961 10978 4.040198 GGAAGGGGGAGGAGGGGT 62.040 72.222 0.00 0.00 0.00 4.95
7962 10979 4.845307 GGGAAGGGGGAGGAGGGG 62.845 77.778 0.00 0.00 0.00 4.79
7963 10980 4.845307 GGGGAAGGGGGAGGAGGG 62.845 77.778 0.00 0.00 0.00 4.30
7964 10981 4.845307 GGGGGAAGGGGGAGGAGG 62.845 77.778 0.00 0.00 0.00 4.30
8038 11055 2.041115 GCGAAAAGGGAGCAGGTCC 61.041 63.158 10.51 10.51 46.10 4.46
8039 11056 2.391389 CGCGAAAAGGGAGCAGGTC 61.391 63.158 0.00 0.00 34.27 3.85
8040 11057 2.358737 CGCGAAAAGGGAGCAGGT 60.359 61.111 0.00 0.00 34.27 4.00
8041 11058 3.804193 GCGCGAAAAGGGAGCAGG 61.804 66.667 12.10 0.00 34.27 4.85
8042 11059 4.152625 CGCGCGAAAAGGGAGCAG 62.153 66.667 28.94 0.00 34.27 4.24
8064 11081 3.958147 ATCCACGCGCAACAGGGAG 62.958 63.158 5.73 0.00 0.00 4.30
8065 11082 3.950794 GATCCACGCGCAACAGGGA 62.951 63.158 5.73 6.58 0.00 4.20
8066 11083 3.499737 GATCCACGCGCAACAGGG 61.500 66.667 5.73 0.23 0.00 4.45
8067 11084 3.499737 GGATCCACGCGCAACAGG 61.500 66.667 5.73 2.77 0.00 4.00
8068 11085 3.853330 CGGATCCACGCGCAACAG 61.853 66.667 13.41 0.00 0.00 3.16
8076 11093 2.162754 GTACCAACGCGGATCCACG 61.163 63.158 20.32 20.32 38.63 4.94
8077 11094 2.162754 CGTACCAACGCGGATCCAC 61.163 63.158 12.47 0.00 43.12 4.02
8078 11095 2.182284 CGTACCAACGCGGATCCA 59.818 61.111 12.47 0.00 43.12 3.41
8111 11128 2.499732 GCTTGAAAACGCGCGGAG 60.500 61.111 35.22 20.35 0.00 4.63
8112 11129 2.970324 AGCTTGAAAACGCGCGGA 60.970 55.556 35.22 9.26 0.00 5.54
8113 11130 2.796617 CAGCTTGAAAACGCGCGG 60.797 61.111 35.22 15.38 0.00 6.46
8114 11131 3.452668 GCAGCTTGAAAACGCGCG 61.453 61.111 30.96 30.96 0.00 6.86
8115 11132 2.050985 AGCAGCTTGAAAACGCGC 60.051 55.556 5.73 0.00 0.00 6.86
8116 11133 2.359791 GCAGCAGCTTGAAAACGCG 61.360 57.895 3.53 3.53 37.91 6.01
8117 11134 2.359791 CGCAGCAGCTTGAAAACGC 61.360 57.895 0.00 0.00 39.10 4.84
8118 11135 3.819393 CGCAGCAGCTTGAAAACG 58.181 55.556 0.00 0.00 39.10 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.