Multiple sequence alignment - TraesCS1B01G333100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G333100 chr1B 100.000 6028 0 0 948 6975 559574501 559580528 0.000000e+00 11132.0
1 TraesCS1B01G333100 chr1B 99.482 772 2 2 6205 6975 627877951 627878721 0.000000e+00 1402.0
2 TraesCS1B01G333100 chr1B 100.000 635 0 0 1 635 559573554 559574188 0.000000e+00 1173.0
3 TraesCS1B01G333100 chr1B 91.304 253 22 0 32 284 644364697 644364949 5.180000e-91 346.0
4 TraesCS1B01G333100 chr1B 92.537 134 8 1 368 501 644392858 644392989 2.570000e-44 191.0
5 TraesCS1B01G333100 chr2A 92.052 4429 227 56 1407 5767 776223738 776219367 0.000000e+00 6113.0
6 TraesCS1B01G333100 chr2A 82.554 791 86 26 6205 6971 409165441 409164679 0.000000e+00 649.0
7 TraesCS1B01G333100 chr2A 89.273 289 20 4 950 1237 776224212 776223934 1.110000e-92 351.0
8 TraesCS1B01G333100 chr2D 93.245 2265 116 16 1406 3662 651411942 651414177 0.000000e+00 3301.0
9 TraesCS1B01G333100 chr2D 91.145 2157 126 30 3674 5779 651414298 651416440 0.000000e+00 2865.0
10 TraesCS1B01G333100 chr2D 95.228 461 21 1 948 1407 651411452 651411912 0.000000e+00 728.0
11 TraesCS1B01G333100 chr2D 94.043 470 17 6 6205 6663 380934670 380934201 0.000000e+00 702.0
12 TraesCS1B01G333100 chr2D 98.058 103 2 0 5775 5877 651416469 651416571 5.560000e-41 180.0
13 TraesCS1B01G333100 chr2B 91.319 1486 78 28 2924 4385 780819372 780820830 0.000000e+00 1982.0
14 TraesCS1B01G333100 chr2B 91.591 1439 72 12 4368 5779 780821014 780822430 0.000000e+00 1941.0
15 TraesCS1B01G333100 chr2B 93.438 1280 56 8 1666 2939 780818088 780819345 0.000000e+00 1873.0
16 TraesCS1B01G333100 chr2B 99.482 772 2 2 6205 6975 783419301 783420071 0.000000e+00 1402.0
17 TraesCS1B01G333100 chr2B 96.314 624 23 0 1 624 84773302 84773925 0.000000e+00 1026.0
18 TraesCS1B01G333100 chr2B 91.701 241 20 0 32 272 669447303 669447543 1.120000e-87 335.0
19 TraesCS1B01G333100 chr1A 99.223 772 3 3 6205 6975 107522445 107523214 0.000000e+00 1389.0
20 TraesCS1B01G333100 chr1A 99.093 772 5 2 6205 6975 111974904 111975674 0.000000e+00 1386.0
21 TraesCS1B01G333100 chr1A 97.143 35 1 0 332 366 31029003 31029037 7.560000e-05 60.2
22 TraesCS1B01G333100 chr3B 96.791 779 16 4 6205 6975 809080204 809080981 0.000000e+00 1291.0
23 TraesCS1B01G333100 chr3B 98.776 245 3 0 4463 4707 360429163 360428919 2.990000e-118 436.0
24 TraesCS1B01G333100 chr7B 96.160 625 23 1 1 624 213254193 213253569 0.000000e+00 1020.0
25 TraesCS1B01G333100 chr7B 85.157 795 87 21 6200 6971 611672916 611672130 0.000000e+00 785.0
26 TraesCS1B01G333100 chr7B 88.327 257 28 1 368 624 654008043 654008297 2.440000e-79 307.0
27 TraesCS1B01G333100 chr6B 86.881 808 68 23 6199 6975 560690703 560689903 0.000000e+00 870.0
28 TraesCS1B01G333100 chr6B 95.455 110 5 0 39 148 68915801 68915692 7.190000e-40 176.0
29 TraesCS1B01G333100 chr1D 86.177 803 76 19 6205 6975 480637730 480636931 0.000000e+00 835.0
30 TraesCS1B01G333100 chr1D 86.559 372 28 14 4929 5294 493954689 493954334 2.360000e-104 390.0
31 TraesCS1B01G333100 chr1D 84.507 71 10 1 6093 6163 333262332 333262263 1.260000e-07 69.4
32 TraesCS1B01G333100 chr4A 86.160 802 76 20 6205 6975 593753847 593754644 0.000000e+00 833.0
33 TraesCS1B01G333100 chr4A 82.796 93 16 0 6093 6185 741451623 741451531 4.480000e-12 84.2
34 TraesCS1B01G333100 chr5B 99.529 425 0 2 6205 6628 215895917 215895494 0.000000e+00 773.0
35 TraesCS1B01G333100 chr5A 92.540 496 21 4 129 624 340598704 340599183 0.000000e+00 697.0
36 TraesCS1B01G333100 chr3A 92.540 496 21 3 129 624 687598820 687599299 0.000000e+00 697.0
37 TraesCS1B01G333100 chr4B 91.207 489 27 8 6491 6975 165041003 165040527 0.000000e+00 651.0
38 TraesCS1B01G333100 chr4B 84.270 89 12 2 6093 6180 16991603 16991690 1.250000e-12 86.1
39 TraesCS1B01G333100 chr6D 90.947 243 18 2 32 271 410041724 410041965 2.430000e-84 324.0
40 TraesCS1B01G333100 chr6A 90.213 235 20 1 32 263 555359067 555358833 3.160000e-78 303.0
41 TraesCS1B01G333100 chr7A 91.045 201 18 0 424 624 675942017 675942217 8.910000e-69 272.0
42 TraesCS1B01G333100 chr7A 93.258 178 12 0 97 274 675923683 675923860 5.370000e-66 263.0
43 TraesCS1B01G333100 chr4D 84.706 85 10 2 1412 1496 370374502 370374421 1.610000e-11 82.4
44 TraesCS1B01G333100 chr5D 90.196 51 5 0 316 366 7043759 7043809 4.520000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G333100 chr1B 559573554 559580528 6974 False 6152.5 11132 100.0000 1 6975 2 chr1B.!!$F4 6974
1 TraesCS1B01G333100 chr1B 627877951 627878721 770 False 1402.0 1402 99.4820 6205 6975 1 chr1B.!!$F1 770
2 TraesCS1B01G333100 chr2A 776219367 776224212 4845 True 3232.0 6113 90.6625 950 5767 2 chr2A.!!$R2 4817
3 TraesCS1B01G333100 chr2A 409164679 409165441 762 True 649.0 649 82.5540 6205 6971 1 chr2A.!!$R1 766
4 TraesCS1B01G333100 chr2D 651411452 651416571 5119 False 1768.5 3301 94.4190 948 5877 4 chr2D.!!$F1 4929
5 TraesCS1B01G333100 chr2B 780818088 780822430 4342 False 1932.0 1982 92.1160 1666 5779 3 chr2B.!!$F4 4113
6 TraesCS1B01G333100 chr2B 783419301 783420071 770 False 1402.0 1402 99.4820 6205 6975 1 chr2B.!!$F3 770
7 TraesCS1B01G333100 chr2B 84773302 84773925 623 False 1026.0 1026 96.3140 1 624 1 chr2B.!!$F1 623
8 TraesCS1B01G333100 chr1A 107522445 107523214 769 False 1389.0 1389 99.2230 6205 6975 1 chr1A.!!$F2 770
9 TraesCS1B01G333100 chr1A 111974904 111975674 770 False 1386.0 1386 99.0930 6205 6975 1 chr1A.!!$F3 770
10 TraesCS1B01G333100 chr3B 809080204 809080981 777 False 1291.0 1291 96.7910 6205 6975 1 chr3B.!!$F1 770
11 TraesCS1B01G333100 chr7B 213253569 213254193 624 True 1020.0 1020 96.1600 1 624 1 chr7B.!!$R1 623
12 TraesCS1B01G333100 chr7B 611672130 611672916 786 True 785.0 785 85.1570 6200 6971 1 chr7B.!!$R2 771
13 TraesCS1B01G333100 chr6B 560689903 560690703 800 True 870.0 870 86.8810 6199 6975 1 chr6B.!!$R2 776
14 TraesCS1B01G333100 chr1D 480636931 480637730 799 True 835.0 835 86.1770 6205 6975 1 chr1D.!!$R2 770
15 TraesCS1B01G333100 chr4A 593753847 593754644 797 False 833.0 833 86.1600 6205 6975 1 chr4A.!!$F1 770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
561 563 0.959553 ATTCGCCTGATATCGTCGGT 59.040 50.000 9.96 0.0 0.00 4.69 F
572 574 1.855513 ATCGTCGGTCGTGTTTTTGA 58.144 45.000 0.00 0.0 40.80 2.69 F
1165 1168 2.041265 CAGCCTCCACCCCCTAGT 59.959 66.667 0.00 0.0 0.00 2.57 F
1947 2038 0.028902 GCGGGATTTTACATGACGGC 59.971 55.000 0.00 0.0 0.00 5.68 F
2260 2351 0.400213 CCTTGTTACTGGTGGAGCCA 59.600 55.000 0.00 0.0 46.95 4.75 F
2401 2492 0.818296 AGCCGTCGCTCTTTCATACT 59.182 50.000 0.00 0.0 43.95 2.12 F
3835 4091 1.534175 CGTCGATACTGTTCTCTGCCC 60.534 57.143 0.00 0.0 0.00 5.36 F
4190 4477 0.480690 TCTAGCTAGCCCCCTCTCAG 59.519 60.000 16.35 0.0 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1714 1802 0.253044 GTAGGCATGGCTCAAGTCCA 59.747 55.000 26.96 2.85 38.09 4.02 R
1715 1803 0.464554 GGTAGGCATGGCTCAAGTCC 60.465 60.000 26.96 16.41 0.00 3.85 R
2260 2351 0.765510 GTCCTGGAGGGTTGAACTGT 59.234 55.000 0.00 0.00 36.25 3.55 R
3294 3437 0.036732 AGACCGCAAAGGATCAGCAA 59.963 50.000 0.00 0.00 45.00 3.91 R
3296 3439 0.391661 TCAGACCGCAAAGGATCAGC 60.392 55.000 0.00 0.00 45.00 4.26 R
3991 4260 1.132849 TCTGGGACAAGGAACCTCTCA 60.133 52.381 0.00 0.00 38.70 3.27 R
5215 5774 0.109086 CAAGAGTCACGCGACCAGAT 60.109 55.000 15.93 0.00 43.73 2.90 R
6074 6685 0.108851 CGCCAGTTTTTATGCCCACC 60.109 55.000 0.00 0.00 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 2.337749 CTTCCGCGGCGTCATAGAGT 62.338 60.000 23.51 0.00 0.00 3.24
306 307 3.474570 GAGGAGGTGCTGCGGGAT 61.475 66.667 0.00 0.00 0.00 3.85
380 381 1.038130 GCCTCCGAGCCTAGAAGTCA 61.038 60.000 0.00 0.00 0.00 3.41
557 559 1.338107 TGGGATTCGCCTGATATCGT 58.662 50.000 0.00 0.00 36.66 3.73
561 563 0.959553 ATTCGCCTGATATCGTCGGT 59.040 50.000 9.96 0.00 0.00 4.69
572 574 1.855513 ATCGTCGGTCGTGTTTTTGA 58.144 45.000 0.00 0.00 40.80 2.69
581 583 5.238868 TCGGTCGTGTTTTTGAATAAATCCA 59.761 36.000 0.00 0.00 0.00 3.41
1165 1168 2.041265 CAGCCTCCACCCCCTAGT 59.959 66.667 0.00 0.00 0.00 2.57
1169 1172 2.064581 CCTCCACCCCCTAGTTCCG 61.065 68.421 0.00 0.00 0.00 4.30
1280 1283 4.394439 TTTACATGCTACAGCGGTGATA 57.606 40.909 23.44 9.00 45.83 2.15
1370 1423 4.505191 CCAATTGAACGATGCCATTGAATC 59.495 41.667 7.12 0.00 0.00 2.52
1464 1551 2.888834 ATTTTTGTGGAGTGTGCACC 57.111 45.000 15.69 5.76 37.97 5.01
1629 1716 6.801539 TTGTTTTCCTAGTTGCTATGTCTG 57.198 37.500 0.00 0.00 0.00 3.51
1635 1722 5.216622 TCCTAGTTGCTATGTCTGGGTAAT 58.783 41.667 0.00 0.00 32.79 1.89
1658 1745 2.364970 CCCACTTTGCAATTTCTCACCA 59.635 45.455 0.00 0.00 0.00 4.17
1696 1783 9.193133 TGCTATATTGCTATACGAAGTTTTCTC 57.807 33.333 10.48 0.00 37.78 2.87
1727 1815 2.592102 ACATGTTGGACTTGAGCCAT 57.408 45.000 0.00 0.00 34.90 4.40
1769 1857 6.261826 AGGCAGATTTATTATGTCTGTTGCTC 59.738 38.462 3.86 0.00 41.04 4.26
1823 1911 8.242085 TGTATGCAGTTTTTGAGCAATTTATG 57.758 30.769 0.00 0.00 42.15 1.90
1824 1912 7.871973 TGTATGCAGTTTTTGAGCAATTTATGT 59.128 29.630 0.00 0.00 42.15 2.29
1925 2016 8.691797 GGACAGACTTGAATAAGAGAGAAGTAT 58.308 37.037 0.00 0.00 37.36 2.12
1947 2038 0.028902 GCGGGATTTTACATGACGGC 59.971 55.000 0.00 0.00 0.00 5.68
2041 2132 0.942410 TTGCTGTCGTACCGAACTGC 60.942 55.000 10.65 10.65 37.72 4.40
2260 2351 0.400213 CCTTGTTACTGGTGGAGCCA 59.600 55.000 0.00 0.00 46.95 4.75
2401 2492 0.818296 AGCCGTCGCTCTTTCATACT 59.182 50.000 0.00 0.00 43.95 2.12
2417 2508 7.877612 TCTTTCATACTCAATGCAGTCTTGTTA 59.122 33.333 0.00 0.00 35.38 2.41
2485 2576 6.816640 AGAACTTTACGCTGAATTATGCTGTA 59.183 34.615 1.53 3.10 0.00 2.74
2684 2775 7.040494 CCTCACTGACATGATGTGGATATATC 58.960 42.308 1.23 3.96 33.04 1.63
2743 2841 4.600062 AGTGTGGACCCAGGATAATTTTC 58.400 43.478 0.00 0.00 0.00 2.29
2774 2872 4.819105 TGTGACCTTCGTATGGAAAGAT 57.181 40.909 0.00 0.00 33.34 2.40
2790 2888 4.633565 GGAAAGATCAGCTAGGAACTTGTG 59.366 45.833 0.00 0.00 41.75 3.33
2805 2903 3.679389 ACTTGTGCCTCTTGTAATCTGG 58.321 45.455 0.00 0.00 0.00 3.86
2939 3038 3.892284 TGCTGAAAACAGAAGGGTAACA 58.108 40.909 0.00 0.00 39.74 2.41
2964 3106 7.333672 CACCCTGTGTCCTACTTTACTTTATTC 59.666 40.741 0.00 0.00 0.00 1.75
3031 3173 7.070322 TGGTTAGACAGGTTGTAGACTTTAGTT 59.930 37.037 0.00 0.00 0.00 2.24
3042 3184 7.724305 TGTAGACTTTAGTTGAATGGTTGTC 57.276 36.000 0.00 0.00 0.00 3.18
3054 3196 4.506288 TGAATGGTTGTCGTTATGATAGCG 59.494 41.667 2.12 2.12 0.00 4.26
3076 3218 5.619981 GCGTCAAACAGAGATGGCTAAAAAT 60.620 40.000 0.00 0.00 0.00 1.82
3079 3221 7.852945 CGTCAAACAGAGATGGCTAAAAATATC 59.147 37.037 0.00 0.00 0.00 1.63
3093 3235 8.682710 GGCTAAAAATATCATCCAACTGTACAA 58.317 33.333 0.00 0.00 0.00 2.41
3191 3333 7.693969 ATCAAATATTATGGCCTAGAGTTGC 57.306 36.000 3.32 0.00 0.00 4.17
3196 3338 4.844349 TTATGGCCTAGAGTTGCTTTCT 57.156 40.909 3.32 0.00 0.00 2.52
3267 3410 6.773976 ATGGTCAGGTATTTGGTTATGTTG 57.226 37.500 0.00 0.00 0.00 3.33
3294 3437 8.492782 AGTTGAGAAGATATGACAAGGAATGAT 58.507 33.333 0.00 0.00 0.00 2.45
3295 3438 9.118300 GTTGAGAAGATATGACAAGGAATGATT 57.882 33.333 0.00 0.00 0.00 2.57
3296 3439 8.672823 TGAGAAGATATGACAAGGAATGATTG 57.327 34.615 0.00 0.00 0.00 2.67
3318 3461 2.353889 CTGATCCTTTGCGGTCTGAATG 59.646 50.000 0.00 0.00 0.00 2.67
3319 3462 2.027285 TGATCCTTTGCGGTCTGAATGA 60.027 45.455 0.00 0.00 0.00 2.57
3385 3529 6.530019 AATGAATGTGAGGGTTTATTCCAC 57.470 37.500 0.00 0.00 0.00 4.02
3517 3661 4.020396 ACATCTGTGGATATCTGCTCATCC 60.020 45.833 2.05 0.00 41.05 3.51
3537 3681 7.471721 TCATCCATGTTTGACATTCGAAATAC 58.528 34.615 0.00 0.00 36.53 1.89
3557 3701 6.861065 ATACTTTTGATCACACTGTTTCGT 57.139 33.333 0.00 0.00 0.00 3.85
3558 3702 5.560966 ACTTTTGATCACACTGTTTCGTT 57.439 34.783 0.00 0.00 0.00 3.85
3559 3703 5.569413 ACTTTTGATCACACTGTTTCGTTC 58.431 37.500 0.00 0.00 0.00 3.95
3560 3704 3.852471 TTGATCACACTGTTTCGTTCG 57.148 42.857 0.00 0.00 0.00 3.95
3561 3705 2.816689 TGATCACACTGTTTCGTTCGT 58.183 42.857 0.00 0.00 0.00 3.85
3574 3718 5.921976 TGTTTCGTTCGTCTAGCTTTGATTA 59.078 36.000 0.00 0.00 0.00 1.75
3577 3721 8.589629 GTTTCGTTCGTCTAGCTTTGATTATTA 58.410 33.333 0.00 0.00 0.00 0.98
3581 3725 9.916397 CGTTCGTCTAGCTTTGATTATTATTTT 57.084 29.630 0.00 0.00 0.00 1.82
3622 3766 4.386652 GCACCATCATGTCATTGTGTTTTC 59.613 41.667 0.00 0.00 0.00 2.29
3642 3786 6.553953 TTTCCAAGCACCATATACTGTCTA 57.446 37.500 0.00 0.00 0.00 2.59
3655 3799 9.900710 CCATATACTGTCTAGTTGATCAGTTAC 57.099 37.037 12.25 0.00 37.79 2.50
3663 3807 8.421784 TGTCTAGTTGATCAGTTACTCAAACTT 58.578 33.333 1.79 0.00 46.61 2.66
3672 3821 8.738645 ATCAGTTACTCAAACTTTTTCTCTGT 57.261 30.769 0.00 0.00 46.61 3.41
3835 4091 1.534175 CGTCGATACTGTTCTCTGCCC 60.534 57.143 0.00 0.00 0.00 5.36
3920 4176 8.514330 ACCTGAACTAAGTCAAAATGTAACAA 57.486 30.769 0.00 0.00 0.00 2.83
3947 4212 8.616076 CCTGTGTTTTTGATATATCTCTTGGTC 58.384 37.037 13.79 1.81 0.00 4.02
3991 4260 2.027837 GCAGGAATTTGCCTTGACCAAT 60.028 45.455 0.00 0.00 38.13 3.16
4060 4329 6.212589 TGGGTTAGTGTCATCTAAATGTCTCA 59.787 38.462 0.00 0.00 34.32 3.27
4091 4367 7.920151 CCTTCTTCATCTGTACTTCATAGTCTG 59.080 40.741 0.00 0.00 35.78 3.51
4190 4477 0.480690 TCTAGCTAGCCCCCTCTCAG 59.519 60.000 16.35 0.00 0.00 3.35
4239 4526 4.871871 TCAGAGACTACTCAAGGATCCT 57.128 45.455 9.02 9.02 44.79 3.24
4240 4527 4.787551 TCAGAGACTACTCAAGGATCCTC 58.212 47.826 16.52 0.00 44.79 3.71
4381 4679 8.511321 GTCTGTAAAAATGTGTGGTGATCATTA 58.489 33.333 0.00 0.00 32.52 1.90
4389 4687 6.343716 TGTGTGGTGATCATTAAAATGCTT 57.656 33.333 0.00 0.00 36.36 3.91
4431 4931 8.815565 TTCCATTGCATTAAACTGGATAAGTA 57.184 30.769 0.00 0.00 38.56 2.24
4460 4960 3.653836 TGGGACCTTACATGTTACAACCT 59.346 43.478 2.30 0.00 0.00 3.50
4777 5295 7.712639 TCTGCCAATTCATGTAGATAGAGAAAC 59.287 37.037 0.00 0.00 0.00 2.78
4812 5330 9.950496 ACAGAGTTATGTACAGAATCTTTTGAT 57.050 29.630 6.16 0.00 41.73 2.57
4966 5522 9.896645 CACCTTAACATATATAGGCTGAATGAT 57.103 33.333 0.00 0.00 0.00 2.45
4981 5537 5.277058 GCTGAATGATTGTCAGGATAACGTC 60.277 44.000 3.79 0.00 42.36 4.34
5122 5681 2.416547 CCTTGCTGAGTGTATTGTTCGG 59.583 50.000 0.00 0.00 0.00 4.30
5143 5702 1.642037 CTGCACAAGCCTGTCATCCG 61.642 60.000 0.00 0.00 41.13 4.18
5181 5740 7.880713 TGTGCTTTATCAGAGGTATGTTTTGTA 59.119 33.333 0.00 0.00 0.00 2.41
5214 5773 2.522836 ATGCCTGACGCTATCTTGAG 57.477 50.000 0.00 0.00 38.78 3.02
5215 5774 1.474330 TGCCTGACGCTATCTTGAGA 58.526 50.000 0.00 0.00 38.78 3.27
5220 5779 3.305267 CCTGACGCTATCTTGAGATCTGG 60.305 52.174 0.00 0.00 36.05 3.86
5244 5812 1.388093 CGTGACTCTTGTTCTCATGCG 59.612 52.381 0.00 0.00 0.00 4.73
5250 5818 1.202758 TCTTGTTCTCATGCGTTGGGT 60.203 47.619 0.00 0.00 0.00 4.51
5350 5919 7.963532 TGTAGGAAAAGAGACTGTGTTATCTT 58.036 34.615 0.00 0.00 33.51 2.40
5360 5930 4.397420 ACTGTGTTATCTTCCATTGCACA 58.603 39.130 0.00 0.00 34.74 4.57
5542 6120 1.061887 GCGCGAATGGCATTAACGT 59.938 52.632 25.66 2.63 43.84 3.99
5555 6133 4.083484 GGCATTAACGTTCTGCTACTTTGT 60.083 41.667 25.73 0.00 36.18 2.83
5629 6207 2.447250 GATTTCGAGTCGATGTGCGTA 58.553 47.619 17.34 0.00 41.80 4.42
5632 6210 0.518195 TCGAGTCGATGTGCGTAACA 59.482 50.000 12.09 0.00 44.79 2.41
5686 6264 0.455815 GCCGCCGAAGATTTTTCCAT 59.544 50.000 0.00 0.00 0.00 3.41
5691 6269 4.423732 CGCCGAAGATTTTTCCATTGAAT 58.576 39.130 0.00 0.00 0.00 2.57
5694 6272 6.458206 CGCCGAAGATTTTTCCATTGAATAGA 60.458 38.462 0.00 0.00 0.00 1.98
5732 6310 5.880332 GGACAATGTAGCCTGTTTTAGATGA 59.120 40.000 0.00 0.00 0.00 2.92
5745 6323 8.246180 CCTGTTTTAGATGACATGTTTAGCAAT 58.754 33.333 0.00 0.00 0.00 3.56
5772 6350 5.337169 GCATTGCAATTAGGGGTTTGTCTTA 60.337 40.000 9.83 0.00 0.00 2.10
5838 6449 0.819582 GGTTGTCTTCCCCATGCATG 59.180 55.000 20.19 20.19 0.00 4.06
5861 6472 3.073678 ACGCATGCAGATCAACTTTGTA 58.926 40.909 19.57 0.00 0.00 2.41
5883 6494 4.782019 TGAATGGATTCAGTTTTTCCCG 57.218 40.909 0.00 0.00 41.51 5.14
5884 6495 4.402829 TGAATGGATTCAGTTTTTCCCGA 58.597 39.130 0.00 0.00 41.51 5.14
5885 6496 4.458989 TGAATGGATTCAGTTTTTCCCGAG 59.541 41.667 0.00 0.00 41.51 4.63
5886 6497 2.790433 TGGATTCAGTTTTTCCCGAGG 58.210 47.619 0.00 0.00 0.00 4.63
5887 6498 2.373836 TGGATTCAGTTTTTCCCGAGGA 59.626 45.455 0.00 0.00 0.00 3.71
5888 6499 3.010138 TGGATTCAGTTTTTCCCGAGGAT 59.990 43.478 0.00 0.00 0.00 3.24
5889 6500 4.017126 GGATTCAGTTTTTCCCGAGGATT 58.983 43.478 0.00 0.00 0.00 3.01
5890 6501 4.462834 GGATTCAGTTTTTCCCGAGGATTT 59.537 41.667 0.00 0.00 0.00 2.17
5891 6502 5.047306 GGATTCAGTTTTTCCCGAGGATTTT 60.047 40.000 0.00 0.00 0.00 1.82
5892 6503 5.447624 TTCAGTTTTTCCCGAGGATTTTC 57.552 39.130 0.00 0.00 0.00 2.29
5893 6504 4.725490 TCAGTTTTTCCCGAGGATTTTCT 58.275 39.130 0.00 0.00 0.00 2.52
5894 6505 5.871834 TCAGTTTTTCCCGAGGATTTTCTA 58.128 37.500 0.00 0.00 0.00 2.10
5895 6506 5.938125 TCAGTTTTTCCCGAGGATTTTCTAG 59.062 40.000 0.00 0.00 0.00 2.43
5896 6507 4.700692 AGTTTTTCCCGAGGATTTTCTAGC 59.299 41.667 0.00 0.00 0.00 3.42
5897 6508 3.277142 TTTCCCGAGGATTTTCTAGCC 57.723 47.619 0.00 0.00 0.00 3.93
5898 6509 0.750850 TCCCGAGGATTTTCTAGCCG 59.249 55.000 0.00 0.00 0.00 5.52
5899 6510 0.750850 CCCGAGGATTTTCTAGCCGA 59.249 55.000 0.00 0.00 0.00 5.54
5900 6511 1.538419 CCCGAGGATTTTCTAGCCGAC 60.538 57.143 0.00 0.00 0.00 4.79
5901 6512 1.538419 CCGAGGATTTTCTAGCCGACC 60.538 57.143 0.00 0.00 0.00 4.79
5902 6513 1.409427 CGAGGATTTTCTAGCCGACCT 59.591 52.381 0.00 0.00 0.00 3.85
5903 6514 2.159085 CGAGGATTTTCTAGCCGACCTT 60.159 50.000 0.00 0.00 0.00 3.50
5904 6515 3.679083 CGAGGATTTTCTAGCCGACCTTT 60.679 47.826 0.00 0.00 0.00 3.11
5905 6516 3.610911 AGGATTTTCTAGCCGACCTTTG 58.389 45.455 0.00 0.00 0.00 2.77
5906 6517 2.097629 GGATTTTCTAGCCGACCTTTGC 59.902 50.000 0.00 0.00 0.00 3.68
5907 6518 2.264005 TTTTCTAGCCGACCTTTGCA 57.736 45.000 0.00 0.00 0.00 4.08
5908 6519 2.489938 TTTCTAGCCGACCTTTGCAT 57.510 45.000 0.00 0.00 0.00 3.96
5909 6520 1.737838 TTCTAGCCGACCTTTGCATG 58.262 50.000 0.00 0.00 0.00 4.06
5910 6521 0.901827 TCTAGCCGACCTTTGCATGA 59.098 50.000 0.00 0.00 0.00 3.07
5911 6522 1.277842 TCTAGCCGACCTTTGCATGAA 59.722 47.619 0.00 0.00 0.00 2.57
5912 6523 1.398390 CTAGCCGACCTTTGCATGAAC 59.602 52.381 0.00 0.00 0.00 3.18
5913 6524 1.212751 GCCGACCTTTGCATGAACC 59.787 57.895 0.00 0.00 0.00 3.62
5914 6525 1.244019 GCCGACCTTTGCATGAACCT 61.244 55.000 0.00 0.00 0.00 3.50
5915 6526 1.247567 CCGACCTTTGCATGAACCTT 58.752 50.000 0.00 0.00 0.00 3.50
5916 6527 1.200020 CCGACCTTTGCATGAACCTTC 59.800 52.381 0.00 0.00 0.00 3.46
5917 6528 1.200020 CGACCTTTGCATGAACCTTCC 59.800 52.381 0.00 0.00 0.00 3.46
5918 6529 2.519013 GACCTTTGCATGAACCTTCCT 58.481 47.619 0.00 0.00 0.00 3.36
5919 6530 2.893489 GACCTTTGCATGAACCTTCCTT 59.107 45.455 0.00 0.00 0.00 3.36
5920 6531 2.629617 ACCTTTGCATGAACCTTCCTTG 59.370 45.455 0.00 0.00 0.00 3.61
5921 6532 2.611224 CCTTTGCATGAACCTTCCTTGC 60.611 50.000 0.00 0.00 36.46 4.01
5922 6533 1.702182 TTGCATGAACCTTCCTTGCA 58.298 45.000 0.00 8.08 40.93 4.08
5923 6534 1.927487 TGCATGAACCTTCCTTGCAT 58.073 45.000 0.00 0.00 39.11 3.96
5924 6535 2.250031 TGCATGAACCTTCCTTGCATT 58.750 42.857 0.00 0.00 39.11 3.56
5925 6536 2.633967 TGCATGAACCTTCCTTGCATTT 59.366 40.909 0.00 0.00 39.11 2.32
5926 6537 3.831333 TGCATGAACCTTCCTTGCATTTA 59.169 39.130 0.00 0.00 39.11 1.40
5927 6538 4.082081 TGCATGAACCTTCCTTGCATTTAG 60.082 41.667 0.00 0.00 39.11 1.85
5928 6539 4.158394 GCATGAACCTTCCTTGCATTTAGA 59.842 41.667 0.00 0.00 36.16 2.10
5929 6540 5.336690 GCATGAACCTTCCTTGCATTTAGAA 60.337 40.000 0.00 0.00 36.16 2.10
5930 6541 6.690530 CATGAACCTTCCTTGCATTTAGAAA 58.309 36.000 0.00 0.00 0.00 2.52
5931 6542 6.723298 TGAACCTTCCTTGCATTTAGAAAA 57.277 33.333 0.00 0.00 0.00 2.29
5932 6543 7.118496 TGAACCTTCCTTGCATTTAGAAAAA 57.882 32.000 0.00 0.00 0.00 1.94
5933 6544 7.734942 TGAACCTTCCTTGCATTTAGAAAAAT 58.265 30.769 0.00 0.00 35.65 1.82
5934 6545 7.872483 TGAACCTTCCTTGCATTTAGAAAAATC 59.128 33.333 0.00 0.00 32.87 2.17
5935 6546 7.301868 ACCTTCCTTGCATTTAGAAAAATCA 57.698 32.000 0.00 0.00 32.87 2.57
5936 6547 7.381323 ACCTTCCTTGCATTTAGAAAAATCAG 58.619 34.615 0.00 0.00 32.87 2.90
5937 6548 7.015584 ACCTTCCTTGCATTTAGAAAAATCAGT 59.984 33.333 0.00 0.00 32.87 3.41
5938 6549 7.543520 CCTTCCTTGCATTTAGAAAAATCAGTC 59.456 37.037 0.00 0.00 32.87 3.51
5939 6550 7.523293 TCCTTGCATTTAGAAAAATCAGTCA 57.477 32.000 0.00 0.00 32.87 3.41
5940 6551 7.950512 TCCTTGCATTTAGAAAAATCAGTCAA 58.049 30.769 0.00 0.00 32.87 3.18
5941 6552 7.867403 TCCTTGCATTTAGAAAAATCAGTCAAC 59.133 33.333 0.00 0.00 32.87 3.18
5942 6553 7.652909 CCTTGCATTTAGAAAAATCAGTCAACA 59.347 33.333 0.00 0.00 32.87 3.33
5943 6554 8.939201 TTGCATTTAGAAAAATCAGTCAACAA 57.061 26.923 0.00 0.00 32.87 2.83
5944 6555 8.578308 TGCATTTAGAAAAATCAGTCAACAAG 57.422 30.769 0.00 0.00 32.87 3.16
5945 6556 8.196771 TGCATTTAGAAAAATCAGTCAACAAGT 58.803 29.630 0.00 0.00 32.87 3.16
5946 6557 8.482429 GCATTTAGAAAAATCAGTCAACAAGTG 58.518 33.333 0.00 0.00 32.87 3.16
5947 6558 9.520204 CATTTAGAAAAATCAGTCAACAAGTGT 57.480 29.630 0.00 0.00 32.87 3.55
5948 6559 8.909708 TTTAGAAAAATCAGTCAACAAGTGTG 57.090 30.769 0.00 0.00 0.00 3.82
5949 6560 6.757897 AGAAAAATCAGTCAACAAGTGTGA 57.242 33.333 0.00 0.00 0.00 3.58
5950 6561 7.156876 AGAAAAATCAGTCAACAAGTGTGAA 57.843 32.000 0.00 0.00 0.00 3.18
5951 6562 7.253422 AGAAAAATCAGTCAACAAGTGTGAAG 58.747 34.615 0.00 0.00 0.00 3.02
5952 6563 6.757897 AAAATCAGTCAACAAGTGTGAAGA 57.242 33.333 0.00 0.00 0.00 2.87
5953 6564 6.949352 AAATCAGTCAACAAGTGTGAAGAT 57.051 33.333 0.00 0.00 0.00 2.40
5954 6565 8.450578 AAAATCAGTCAACAAGTGTGAAGATA 57.549 30.769 0.00 0.00 0.00 1.98
5955 6566 8.627208 AAATCAGTCAACAAGTGTGAAGATAT 57.373 30.769 0.00 0.00 0.00 1.63
5956 6567 7.840342 ATCAGTCAACAAGTGTGAAGATATC 57.160 36.000 0.00 0.00 0.00 1.63
5957 6568 6.166279 TCAGTCAACAAGTGTGAAGATATCC 58.834 40.000 0.00 0.00 0.00 2.59
5958 6569 5.352569 CAGTCAACAAGTGTGAAGATATCCC 59.647 44.000 0.00 0.00 0.00 3.85
5959 6570 4.636206 GTCAACAAGTGTGAAGATATCCCC 59.364 45.833 0.00 0.00 0.00 4.81
5960 6571 4.536090 TCAACAAGTGTGAAGATATCCCCT 59.464 41.667 0.00 0.00 0.00 4.79
5961 6572 5.724370 TCAACAAGTGTGAAGATATCCCCTA 59.276 40.000 0.00 0.00 0.00 3.53
5962 6573 6.214615 TCAACAAGTGTGAAGATATCCCCTAA 59.785 38.462 0.00 0.00 0.00 2.69
5963 6574 6.636454 ACAAGTGTGAAGATATCCCCTAAA 57.364 37.500 0.00 0.00 0.00 1.85
5964 6575 7.027874 ACAAGTGTGAAGATATCCCCTAAAA 57.972 36.000 0.00 0.00 0.00 1.52
5965 6576 7.466804 ACAAGTGTGAAGATATCCCCTAAAAA 58.533 34.615 0.00 0.00 0.00 1.94
6005 6616 9.850628 ATTTGTGTCATGATTTCAGTAAATGAG 57.149 29.630 0.00 0.00 39.68 2.90
6006 6617 7.984422 TGTGTCATGATTTCAGTAAATGAGT 57.016 32.000 0.00 0.00 39.68 3.41
6007 6618 8.394971 TGTGTCATGATTTCAGTAAATGAGTT 57.605 30.769 0.00 0.00 39.68 3.01
6008 6619 8.506437 TGTGTCATGATTTCAGTAAATGAGTTC 58.494 33.333 0.00 0.00 39.68 3.01
6009 6620 8.506437 GTGTCATGATTTCAGTAAATGAGTTCA 58.494 33.333 0.00 0.00 39.68 3.18
6010 6621 9.234827 TGTCATGATTTCAGTAAATGAGTTCAT 57.765 29.630 0.00 0.00 39.80 2.57
6015 6626 9.288576 TGATTTCAGTAAATGAGTTCATGAAGT 57.711 29.630 15.73 15.73 39.68 3.01
6019 6630 9.734620 TTCAGTAAATGAGTTCATGAAGTTTTG 57.265 29.630 16.80 8.37 39.68 2.44
6020 6631 7.862372 TCAGTAAATGAGTTCATGAAGTTTTGC 59.138 33.333 16.80 15.91 36.56 3.68
6021 6632 7.864379 CAGTAAATGAGTTCATGAAGTTTTGCT 59.136 33.333 16.80 17.57 36.56 3.91
6022 6633 7.864379 AGTAAATGAGTTCATGAAGTTTTGCTG 59.136 33.333 20.90 0.00 36.56 4.41
6023 6634 5.779529 ATGAGTTCATGAAGTTTTGCTGT 57.220 34.783 16.80 0.00 34.83 4.40
6024 6635 5.581126 TGAGTTCATGAAGTTTTGCTGTT 57.419 34.783 16.80 0.00 0.00 3.16
6025 6636 5.342433 TGAGTTCATGAAGTTTTGCTGTTG 58.658 37.500 16.80 0.00 0.00 3.33
6026 6637 5.125257 TGAGTTCATGAAGTTTTGCTGTTGA 59.875 36.000 16.80 0.00 0.00 3.18
6027 6638 5.964758 AGTTCATGAAGTTTTGCTGTTGAA 58.035 33.333 8.80 0.00 0.00 2.69
6028 6639 6.397272 AGTTCATGAAGTTTTGCTGTTGAAA 58.603 32.000 8.80 0.00 0.00 2.69
6029 6640 7.043565 AGTTCATGAAGTTTTGCTGTTGAAAT 58.956 30.769 8.80 0.00 0.00 2.17
6030 6641 8.196771 AGTTCATGAAGTTTTGCTGTTGAAATA 58.803 29.630 8.80 0.00 0.00 1.40
6031 6642 8.816144 GTTCATGAAGTTTTGCTGTTGAAATAA 58.184 29.630 8.80 0.00 0.00 1.40
6032 6643 8.351495 TCATGAAGTTTTGCTGTTGAAATAAC 57.649 30.769 0.00 0.00 0.00 1.89
6033 6644 7.978414 TCATGAAGTTTTGCTGTTGAAATAACA 59.022 29.630 0.00 0.00 0.00 2.41
6034 6645 8.602328 CATGAAGTTTTGCTGTTGAAATAACAA 58.398 29.630 0.00 0.00 0.00 2.83
6035 6646 8.715191 TGAAGTTTTGCTGTTGAAATAACAAT 57.285 26.923 0.00 0.00 32.36 2.71
6036 6647 9.160496 TGAAGTTTTGCTGTTGAAATAACAATT 57.840 25.926 0.00 0.00 32.36 2.32
6037 6648 9.424659 GAAGTTTTGCTGTTGAAATAACAATTG 57.575 29.630 3.24 3.24 32.36 2.32
6038 6649 8.491331 AGTTTTGCTGTTGAAATAACAATTGT 57.509 26.923 4.92 4.92 32.36 2.71
6039 6650 8.389603 AGTTTTGCTGTTGAAATAACAATTGTG 58.610 29.630 12.82 0.00 32.36 3.33
6040 6651 8.386606 GTTTTGCTGTTGAAATAACAATTGTGA 58.613 29.630 12.82 4.62 32.36 3.58
6041 6652 8.484641 TTTGCTGTTGAAATAACAATTGTGAA 57.515 26.923 12.82 3.98 32.36 3.18
6042 6653 8.484641 TTGCTGTTGAAATAACAATTGTGAAA 57.515 26.923 12.82 1.23 32.36 2.69
6043 6654 8.659925 TGCTGTTGAAATAACAATTGTGAAAT 57.340 26.923 12.82 3.74 32.36 2.17
6044 6655 9.107177 TGCTGTTGAAATAACAATTGTGAAATT 57.893 25.926 12.82 9.69 32.36 1.82
6045 6656 9.934190 GCTGTTGAAATAACAATTGTGAAATTT 57.066 25.926 12.82 16.91 32.36 1.82
6053 6664 9.921637 AATAACAATTGTGAAATTTATGTCGGT 57.078 25.926 12.82 0.00 0.00 4.69
6054 6665 7.867445 AACAATTGTGAAATTTATGTCGGTC 57.133 32.000 12.82 0.00 0.00 4.79
6055 6666 6.386654 ACAATTGTGAAATTTATGTCGGTCC 58.613 36.000 11.07 0.00 0.00 4.46
6056 6667 6.208599 ACAATTGTGAAATTTATGTCGGTCCT 59.791 34.615 11.07 0.00 0.00 3.85
6057 6668 5.873179 TTGTGAAATTTATGTCGGTCCTC 57.127 39.130 0.00 0.00 0.00 3.71
6058 6669 4.258543 TGTGAAATTTATGTCGGTCCTCC 58.741 43.478 0.00 0.00 0.00 4.30
6059 6670 4.019681 TGTGAAATTTATGTCGGTCCTCCT 60.020 41.667 0.00 0.00 0.00 3.69
6060 6671 4.332819 GTGAAATTTATGTCGGTCCTCCTG 59.667 45.833 0.00 0.00 0.00 3.86
6061 6672 3.560636 AATTTATGTCGGTCCTCCTGG 57.439 47.619 0.00 0.00 0.00 4.45
6062 6673 0.539986 TTTATGTCGGTCCTCCTGGC 59.460 55.000 0.00 0.00 0.00 4.85
6063 6674 0.325296 TTATGTCGGTCCTCCTGGCT 60.325 55.000 0.00 0.00 0.00 4.75
6064 6675 0.755698 TATGTCGGTCCTCCTGGCTC 60.756 60.000 0.00 0.00 0.00 4.70
6065 6676 3.462678 GTCGGTCCTCCTGGCTCC 61.463 72.222 0.00 0.00 0.00 4.70
6066 6677 3.673597 TCGGTCCTCCTGGCTCCT 61.674 66.667 0.00 0.00 0.00 3.69
6067 6678 3.465403 CGGTCCTCCTGGCTCCTG 61.465 72.222 0.00 0.00 0.00 3.86
6068 6679 3.791586 GGTCCTCCTGGCTCCTGC 61.792 72.222 0.00 0.00 38.76 4.85
6069 6680 4.154347 GTCCTCCTGGCTCCTGCG 62.154 72.222 0.00 0.00 40.82 5.18
6070 6681 4.704103 TCCTCCTGGCTCCTGCGT 62.704 66.667 0.00 0.00 40.82 5.24
6071 6682 2.759973 CCTCCTGGCTCCTGCGTA 60.760 66.667 0.00 0.00 40.82 4.42
6072 6683 2.790791 CCTCCTGGCTCCTGCGTAG 61.791 68.421 0.00 0.00 40.82 3.51
6073 6684 2.759973 TCCTGGCTCCTGCGTAGG 60.760 66.667 14.20 14.20 46.06 3.18
6074 6685 3.854669 CCTGGCTCCTGCGTAGGG 61.855 72.222 20.19 11.35 44.70 3.53
6079 6690 3.470888 CTCCTGCGTAGGGGTGGG 61.471 72.222 20.19 1.82 44.70 4.61
6082 6693 3.797353 CTGCGTAGGGGTGGGCAT 61.797 66.667 0.00 0.00 34.49 4.40
6083 6694 2.365768 TGCGTAGGGGTGGGCATA 60.366 61.111 0.00 0.00 0.00 3.14
6084 6695 1.978455 CTGCGTAGGGGTGGGCATAA 61.978 60.000 0.00 0.00 34.49 1.90
6085 6696 1.225148 GCGTAGGGGTGGGCATAAA 59.775 57.895 0.00 0.00 0.00 1.40
6086 6697 0.394625 GCGTAGGGGTGGGCATAAAA 60.395 55.000 0.00 0.00 0.00 1.52
6087 6698 1.956159 GCGTAGGGGTGGGCATAAAAA 60.956 52.381 0.00 0.00 0.00 1.94
6088 6699 1.746787 CGTAGGGGTGGGCATAAAAAC 59.253 52.381 0.00 0.00 0.00 2.43
6089 6700 2.619590 CGTAGGGGTGGGCATAAAAACT 60.620 50.000 0.00 0.00 0.00 2.66
6090 6701 1.937191 AGGGGTGGGCATAAAAACTG 58.063 50.000 0.00 0.00 0.00 3.16
6091 6702 0.901827 GGGGTGGGCATAAAAACTGG 59.098 55.000 0.00 0.00 0.00 4.00
6092 6703 0.249120 GGGTGGGCATAAAAACTGGC 59.751 55.000 0.00 0.00 38.38 4.85
6093 6704 0.108851 GGTGGGCATAAAAACTGGCG 60.109 55.000 0.00 0.00 39.90 5.69
6094 6705 0.885196 GTGGGCATAAAAACTGGCGA 59.115 50.000 0.00 0.00 39.90 5.54
6095 6706 1.271102 GTGGGCATAAAAACTGGCGAA 59.729 47.619 0.00 0.00 39.90 4.70
6096 6707 1.271102 TGGGCATAAAAACTGGCGAAC 59.729 47.619 0.00 0.00 39.90 3.95
6097 6708 1.403647 GGGCATAAAAACTGGCGAACC 60.404 52.381 0.00 0.00 39.90 3.62
6098 6709 1.613270 GCATAAAAACTGGCGAACCG 58.387 50.000 0.00 0.00 39.70 4.44
6099 6710 1.198178 GCATAAAAACTGGCGAACCGA 59.802 47.619 0.00 0.00 39.70 4.69
6100 6711 2.159435 GCATAAAAACTGGCGAACCGAT 60.159 45.455 0.00 0.00 39.70 4.18
6101 6712 3.425404 CATAAAAACTGGCGAACCGATG 58.575 45.455 0.00 0.00 39.70 3.84
6102 6713 1.314730 AAAAACTGGCGAACCGATGT 58.685 45.000 0.00 0.00 39.70 3.06
6103 6714 1.314730 AAAACTGGCGAACCGATGTT 58.685 45.000 0.00 0.00 39.70 2.71
6104 6715 0.591170 AAACTGGCGAACCGATGTTG 59.409 50.000 0.00 0.00 39.70 3.33
6105 6716 0.250124 AACTGGCGAACCGATGTTGA 60.250 50.000 0.00 0.00 39.70 3.18
6106 6717 0.250124 ACTGGCGAACCGATGTTGAA 60.250 50.000 0.00 0.00 39.70 2.69
6107 6718 0.871722 CTGGCGAACCGATGTTGAAA 59.128 50.000 0.00 0.00 39.70 2.69
6108 6719 0.589223 TGGCGAACCGATGTTGAAAC 59.411 50.000 0.00 0.00 39.70 2.78
6109 6720 0.109919 GGCGAACCGATGTTGAAACC 60.110 55.000 0.00 0.00 33.97 3.27
6110 6721 0.452122 GCGAACCGATGTTGAAACCG 60.452 55.000 0.00 0.00 33.97 4.44
6111 6722 1.141645 CGAACCGATGTTGAAACCGA 58.858 50.000 0.00 0.00 33.97 4.69
6112 6723 1.527736 CGAACCGATGTTGAAACCGAA 59.472 47.619 0.00 0.00 33.97 4.30
6113 6724 2.158841 CGAACCGATGTTGAAACCGAAT 59.841 45.455 0.00 0.00 33.97 3.34
6114 6725 3.368539 CGAACCGATGTTGAAACCGAATA 59.631 43.478 0.00 0.00 33.97 1.75
6115 6726 4.143073 CGAACCGATGTTGAAACCGAATAA 60.143 41.667 0.00 0.00 33.97 1.40
6116 6727 5.615106 CGAACCGATGTTGAAACCGAATAAA 60.615 40.000 0.00 0.00 33.97 1.40
6117 6728 5.038247 ACCGATGTTGAAACCGAATAAAC 57.962 39.130 0.00 0.00 0.00 2.01
6118 6729 4.083164 ACCGATGTTGAAACCGAATAAACC 60.083 41.667 0.00 0.00 0.00 3.27
6119 6730 4.085884 CGATGTTGAAACCGAATAAACCG 58.914 43.478 0.00 0.00 0.00 4.44
6120 6731 4.143073 CGATGTTGAAACCGAATAAACCGA 60.143 41.667 0.00 0.00 0.00 4.69
6121 6732 5.615106 CGATGTTGAAACCGAATAAACCGAA 60.615 40.000 0.00 0.00 0.00 4.30
6122 6733 5.496133 TGTTGAAACCGAATAAACCGAAA 57.504 34.783 0.00 0.00 0.00 3.46
6123 6734 6.074544 TGTTGAAACCGAATAAACCGAAAT 57.925 33.333 0.00 0.00 0.00 2.17
6124 6735 6.505272 TGTTGAAACCGAATAAACCGAAATT 58.495 32.000 0.00 0.00 0.00 1.82
6125 6736 6.979238 TGTTGAAACCGAATAAACCGAAATTT 59.021 30.769 0.00 0.00 0.00 1.82
6126 6737 7.491696 TGTTGAAACCGAATAAACCGAAATTTT 59.508 29.630 0.00 0.00 0.00 1.82
6127 6738 7.396190 TGAAACCGAATAAACCGAAATTTTG 57.604 32.000 0.00 0.00 0.00 2.44
6128 6739 6.421202 TGAAACCGAATAAACCGAAATTTTGG 59.579 34.615 21.13 21.13 37.75 3.28
6161 6772 7.373778 ACTATGACAGTAAAATCCGGTTTTC 57.626 36.000 10.85 0.29 40.40 2.29
6162 6773 6.938030 ACTATGACAGTAAAATCCGGTTTTCA 59.062 34.615 10.85 4.50 40.40 2.69
6163 6774 6.642707 ATGACAGTAAAATCCGGTTTTCAA 57.357 33.333 10.85 0.56 40.40 2.69
6164 6775 6.067263 TGACAGTAAAATCCGGTTTTCAAG 57.933 37.500 10.85 8.02 40.40 3.02
6165 6776 5.591067 TGACAGTAAAATCCGGTTTTCAAGT 59.409 36.000 10.85 10.47 40.40 3.16
6166 6777 6.068473 ACAGTAAAATCCGGTTTTCAAGTC 57.932 37.500 10.85 1.66 40.40 3.01
6167 6778 5.009310 ACAGTAAAATCCGGTTTTCAAGTCC 59.991 40.000 10.85 0.00 40.40 3.85
6168 6779 5.009210 CAGTAAAATCCGGTTTTCAAGTCCA 59.991 40.000 10.85 0.00 40.40 4.02
6169 6780 5.595133 AGTAAAATCCGGTTTTCAAGTCCAA 59.405 36.000 10.85 0.00 40.40 3.53
6170 6781 5.545063 AAAATCCGGTTTTCAAGTCCAAT 57.455 34.783 10.85 0.00 35.06 3.16
6171 6782 6.658188 AAAATCCGGTTTTCAAGTCCAATA 57.342 33.333 10.85 0.00 35.06 1.90
6172 6783 6.658188 AAATCCGGTTTTCAAGTCCAATAA 57.342 33.333 0.00 0.00 0.00 1.40
6173 6784 5.638596 ATCCGGTTTTCAAGTCCAATAAC 57.361 39.130 0.00 0.00 0.00 1.89
6174 6785 3.822167 TCCGGTTTTCAAGTCCAATAACC 59.178 43.478 0.00 0.00 33.42 2.85
6177 6788 5.441709 GGTTTTCAAGTCCAATAACCGAA 57.558 39.130 0.00 0.00 0.00 4.30
6178 6789 5.217393 GGTTTTCAAGTCCAATAACCGAAC 58.783 41.667 0.00 0.00 0.00 3.95
6179 6790 5.221087 GGTTTTCAAGTCCAATAACCGAACA 60.221 40.000 0.00 0.00 0.00 3.18
6180 6791 6.267070 GTTTTCAAGTCCAATAACCGAACAA 58.733 36.000 0.00 0.00 0.00 2.83
6181 6792 6.452494 TTTCAAGTCCAATAACCGAACAAA 57.548 33.333 0.00 0.00 0.00 2.83
6182 6793 6.452494 TTCAAGTCCAATAACCGAACAAAA 57.548 33.333 0.00 0.00 0.00 2.44
6183 6794 6.642707 TCAAGTCCAATAACCGAACAAAAT 57.357 33.333 0.00 0.00 0.00 1.82
6184 6795 7.045126 TCAAGTCCAATAACCGAACAAAATT 57.955 32.000 0.00 0.00 0.00 1.82
6185 6796 7.142680 TCAAGTCCAATAACCGAACAAAATTC 58.857 34.615 0.00 0.00 0.00 2.17
6186 6797 6.642707 AGTCCAATAACCGAACAAAATTCA 57.357 33.333 0.00 0.00 0.00 2.57
6187 6798 7.045126 AGTCCAATAACCGAACAAAATTCAA 57.955 32.000 0.00 0.00 0.00 2.69
6188 6799 7.493367 AGTCCAATAACCGAACAAAATTCAAA 58.507 30.769 0.00 0.00 0.00 2.69
6189 6800 7.651704 AGTCCAATAACCGAACAAAATTCAAAG 59.348 33.333 0.00 0.00 0.00 2.77
6190 6801 7.436970 GTCCAATAACCGAACAAAATTCAAAGT 59.563 33.333 0.00 0.00 0.00 2.66
6191 6802 8.630917 TCCAATAACCGAACAAAATTCAAAGTA 58.369 29.630 0.00 0.00 0.00 2.24
6192 6803 8.911662 CCAATAACCGAACAAAATTCAAAGTAG 58.088 33.333 0.00 0.00 0.00 2.57
6193 6804 9.672086 CAATAACCGAACAAAATTCAAAGTAGA 57.328 29.630 0.00 0.00 0.00 2.59
6197 6808 8.574196 ACCGAACAAAATTCAAAGTAGAATTG 57.426 30.769 3.02 0.00 44.96 2.32
6198 6809 8.410141 ACCGAACAAAATTCAAAGTAGAATTGA 58.590 29.630 3.02 0.00 44.96 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 3.556004 CGGAAGAAGAACAAGAAGAGGCT 60.556 47.826 0.00 0.00 0.00 4.58
191 192 3.062466 CAGAGGGCGTCACGGAGA 61.062 66.667 10.15 0.00 0.00 3.71
284 285 2.753029 GCAGCACCTCCTCCAAGT 59.247 61.111 0.00 0.00 0.00 3.16
380 381 1.304952 CACTCCCTCTCTCCTCGGT 59.695 63.158 0.00 0.00 0.00 4.69
436 437 2.204291 TTCTCCAGGCCCACCCAT 60.204 61.111 0.00 0.00 36.11 4.00
528 530 1.003112 CGAATCCCAACAACCCGGA 60.003 57.895 0.73 0.00 0.00 5.14
557 559 5.238868 TGGATTTATTCAAAAACACGACCGA 59.761 36.000 0.00 0.00 0.00 4.69
561 563 5.150683 CGCTGGATTTATTCAAAAACACGA 58.849 37.500 0.00 0.00 0.00 4.35
572 574 3.679502 GCTTGTTTTGCGCTGGATTTATT 59.320 39.130 9.73 0.00 0.00 1.40
581 583 0.530431 CCAAAGGCTTGTTTTGCGCT 60.530 50.000 9.73 0.00 34.88 5.92
986 988 4.124351 CTACTGGCGGCCGAACGA 62.124 66.667 33.48 8.52 35.47 3.85
1165 1168 3.691342 CGGTGAGTGCCTCCGGAA 61.691 66.667 5.23 0.00 45.38 4.30
1169 1172 2.997897 AGACCGGTGAGTGCCTCC 60.998 66.667 14.63 0.00 0.00 4.30
1177 1180 2.220586 TGAATGGCCAGACCGGTGA 61.221 57.895 14.63 0.00 43.94 4.02
1187 1190 0.811281 GTACCTTGCTGTGAATGGCC 59.189 55.000 0.00 0.00 0.00 5.36
1355 1408 1.643292 CGCGATTCAATGGCATCGT 59.357 52.632 0.00 0.00 43.49 3.73
1464 1551 2.247372 ACCCAGGAATAAAATGGAGGGG 59.753 50.000 0.00 0.00 39.38 4.79
1635 1722 2.627699 GTGAGAAATTGCAAAGTGGGGA 59.372 45.455 1.71 0.00 0.00 4.81
1645 1732 1.538047 TGGAGCTGGTGAGAAATTGC 58.462 50.000 0.00 0.00 0.00 3.56
1658 1745 5.322754 AGCAATATAGCAAATCATGGAGCT 58.677 37.500 0.00 0.00 40.92 4.09
1705 1793 3.030291 TGGCTCAAGTCCAACATGTTTT 58.970 40.909 8.77 0.00 0.00 2.43
1706 1794 2.665165 TGGCTCAAGTCCAACATGTTT 58.335 42.857 8.77 0.00 0.00 2.83
1707 1795 2.363306 TGGCTCAAGTCCAACATGTT 57.637 45.000 4.92 4.92 0.00 2.71
1708 1796 2.165167 CATGGCTCAAGTCCAACATGT 58.835 47.619 0.00 0.00 37.13 3.21
1709 1797 1.135199 GCATGGCTCAAGTCCAACATG 60.135 52.381 0.00 0.00 37.13 3.21
1710 1798 1.180029 GCATGGCTCAAGTCCAACAT 58.820 50.000 0.00 0.00 37.13 2.71
1711 1799 0.895100 GGCATGGCTCAAGTCCAACA 60.895 55.000 12.86 0.00 37.13 3.33
1712 1800 0.610232 AGGCATGGCTCAAGTCCAAC 60.610 55.000 17.44 0.00 37.13 3.77
1713 1801 0.991146 TAGGCATGGCTCAAGTCCAA 59.009 50.000 26.96 1.99 37.13 3.53
1714 1802 0.253044 GTAGGCATGGCTCAAGTCCA 59.747 55.000 26.96 2.85 38.09 4.02
1715 1803 0.464554 GGTAGGCATGGCTCAAGTCC 60.465 60.000 26.96 16.41 0.00 3.85
1716 1804 0.543749 AGGTAGGCATGGCTCAAGTC 59.456 55.000 26.96 11.47 0.00 3.01
1794 1882 7.733402 ATTGCTCAAAAACTGCATACAAAAT 57.267 28.000 0.00 0.00 36.55 1.82
1795 1883 7.551035 AATTGCTCAAAAACTGCATACAAAA 57.449 28.000 0.00 0.00 36.55 2.44
1823 1911 9.859692 CGTAAAGAAAATTAAGGGATCGATTAC 57.140 33.333 0.00 0.00 0.00 1.89
1824 1912 8.553696 GCGTAAAGAAAATTAAGGGATCGATTA 58.446 33.333 0.00 0.00 0.00 1.75
1848 1939 4.022329 ACTTGAATTTAAAAGGGTCCTGCG 60.022 41.667 0.00 0.00 0.00 5.18
1925 2016 3.199677 CCGTCATGTAAAATCCCGCTAA 58.800 45.455 0.00 0.00 0.00 3.09
1926 2017 2.828877 CCGTCATGTAAAATCCCGCTA 58.171 47.619 0.00 0.00 0.00 4.26
1929 2020 1.330521 CAGCCGTCATGTAAAATCCCG 59.669 52.381 0.00 0.00 0.00 5.14
1947 2038 0.950555 CACCACCACACGTGATCCAG 60.951 60.000 25.01 10.18 46.20 3.86
2041 2132 3.274288 GGAACCAGGAGACTTTGCTATG 58.726 50.000 0.00 0.00 40.21 2.23
2260 2351 0.765510 GTCCTGGAGGGTTGAACTGT 59.234 55.000 0.00 0.00 36.25 3.55
2401 2492 4.910195 AGTCCATAACAAGACTGCATTGA 58.090 39.130 5.55 0.00 41.74 2.57
2417 2508 1.557269 AAGGAGAAGCCGCAGTCCAT 61.557 55.000 8.05 0.00 43.43 3.41
2485 2576 2.288025 ACCAAGGTCCATACGCCGT 61.288 57.895 0.00 0.00 0.00 5.68
2684 2775 7.274686 ACAAACAAAAGAGAACACGGTAATTTG 59.725 33.333 0.00 0.00 33.85 2.32
2743 2841 7.021196 CCATACGAAGGTCACATTTTAACTTG 58.979 38.462 0.00 0.00 0.00 3.16
2774 2872 1.276421 GAGGCACAAGTTCCTAGCTGA 59.724 52.381 0.00 0.00 31.71 4.26
2790 2888 3.618690 ACAGTCCAGATTACAAGAGGC 57.381 47.619 0.00 0.00 0.00 4.70
2805 2903 6.060028 TGCTCAAACAACTCATTAACAGTC 57.940 37.500 0.00 0.00 0.00 3.51
2939 3038 6.947376 ATAAAGTAAAGTAGGACACAGGGT 57.053 37.500 0.00 0.00 0.00 4.34
3031 3173 4.506288 CGCTATCATAACGACAACCATTCA 59.494 41.667 0.00 0.00 0.00 2.57
3042 3184 5.034797 TCTCTGTTTGACGCTATCATAACG 58.965 41.667 0.00 0.00 37.11 3.18
3054 3196 8.677300 TGATATTTTTAGCCATCTCTGTTTGAC 58.323 33.333 0.00 0.00 0.00 3.18
3076 3218 7.226523 GTGCATATGTTGTACAGTTGGATGATA 59.773 37.037 4.29 0.00 40.35 2.15
3079 3221 5.123661 TGTGCATATGTTGTACAGTTGGATG 59.876 40.000 4.29 0.00 44.69 3.51
3093 3235 2.713877 TGCATGAGTGTGTGCATATGT 58.286 42.857 4.29 0.00 45.60 2.29
3158 3300 8.193953 AGGCCATAATATTTGATTTTGGTAGG 57.806 34.615 5.01 0.00 34.16 3.18
3168 3310 6.841601 AGCAACTCTAGGCCATAATATTTGA 58.158 36.000 5.01 0.00 0.00 2.69
3191 3333 9.559977 GCATTTGCTTAGTTTGGCAACAGAAAG 62.560 40.741 0.00 3.05 46.14 2.62
3196 3338 3.129871 GCATTTGCTTAGTTTGGCAACA 58.870 40.909 0.00 0.00 46.14 3.33
3267 3410 7.984050 TCATTCCTTGTCATATCTTCTCAACTC 59.016 37.037 0.00 0.00 0.00 3.01
3294 3437 0.036732 AGACCGCAAAGGATCAGCAA 59.963 50.000 0.00 0.00 45.00 3.91
3295 3438 0.674581 CAGACCGCAAAGGATCAGCA 60.675 55.000 0.00 0.00 45.00 4.41
3296 3439 0.391661 TCAGACCGCAAAGGATCAGC 60.392 55.000 0.00 0.00 45.00 4.26
3318 3461 1.147600 AACGGGACCACAACCAGTC 59.852 57.895 0.00 0.00 35.03 3.51
3319 3462 1.153046 CAACGGGACCACAACCAGT 60.153 57.895 0.00 0.00 37.42 4.00
3385 3529 8.652810 AAACTCTTGATCAAATTTGACTTTGG 57.347 30.769 22.71 13.33 40.49 3.28
3486 3630 6.111382 CAGATATCCACAGATGTGTTCAACT 58.889 40.000 11.76 3.54 44.21 3.16
3517 3661 9.179552 TCAAAAGTATTTCGAATGTCAAACATG 57.820 29.630 0.00 0.00 35.71 3.21
3537 3681 4.666176 CGAACGAAACAGTGTGATCAAAAG 59.334 41.667 0.00 0.00 0.00 2.27
3599 3743 3.581024 AACACAATGACATGATGGTGC 57.419 42.857 0.00 0.00 0.00 5.01
3600 3744 4.925054 GGAAAACACAATGACATGATGGTG 59.075 41.667 0.00 0.00 0.00 4.17
3622 3766 5.537300 ACTAGACAGTATATGGTGCTTGG 57.463 43.478 0.00 0.00 31.45 3.61
3642 3786 9.178758 AGAAAAAGTTTGAGTAACTGATCAACT 57.821 29.630 0.00 0.00 46.34 3.16
3835 4091 9.162764 TCCTTTTTATCTAATTCTCCTTCAACG 57.837 33.333 0.00 0.00 0.00 4.10
3895 4151 8.403236 GTTGTTACATTTTGACTTAGTTCAGGT 58.597 33.333 0.00 0.00 0.00 4.00
3920 4176 8.109634 ACCAAGAGATATATCAAAAACACAGGT 58.890 33.333 15.08 6.98 0.00 4.00
3933 4189 8.110271 TCCGTTAGATGAGACCAAGAGATATAT 58.890 37.037 0.00 0.00 0.00 0.86
3939 4204 4.720649 TTCCGTTAGATGAGACCAAGAG 57.279 45.455 0.00 0.00 0.00 2.85
3940 4205 5.677319 AATTCCGTTAGATGAGACCAAGA 57.323 39.130 0.00 0.00 0.00 3.02
3947 4212 5.904080 GCGAATCAAAATTCCGTTAGATGAG 59.096 40.000 0.00 0.00 38.46 2.90
3991 4260 1.132849 TCTGGGACAAGGAACCTCTCA 60.133 52.381 0.00 0.00 38.70 3.27
4158 4434 5.070001 GGCTAGCTAGAGAGAGAGATTCAA 58.930 45.833 25.15 0.00 0.00 2.69
4239 4526 8.485578 AGGGTGACAAATTAAAATTAGGTTGA 57.514 30.769 0.00 0.00 0.00 3.18
4381 4679 9.777297 AAGTACCATACATTTTGAAAGCATTTT 57.223 25.926 0.00 0.00 39.27 1.82
4385 4683 6.491745 TGGAAGTACCATACATTTTGAAAGCA 59.508 34.615 0.00 0.00 44.64 3.91
4431 4931 2.042979 ACATGTAAGGTCCCAAGGCAAT 59.957 45.455 0.00 0.00 0.00 3.56
4460 4960 5.664294 ATGTATCAAAATGCAAAGCCTGA 57.336 34.783 0.00 0.00 30.90 3.86
4727 5236 2.621526 ACCTGCCTTTCACGGTAAAAAG 59.378 45.455 7.75 7.75 33.26 2.27
4777 5295 8.683550 TCTGTACATAACTCTGTATTGTTTCG 57.316 34.615 0.00 0.00 34.33 3.46
4820 5338 5.694231 TCATGATTGGTAATGCATGTAGC 57.306 39.130 0.00 5.62 45.96 3.58
4826 5345 9.797642 AATAGAACTATCATGATTGGTAATGCA 57.202 29.630 14.65 0.00 0.00 3.96
4892 5431 9.511272 TTCTATCCATCTGATCCAAAATACATG 57.489 33.333 0.00 0.00 34.76 3.21
4966 5522 5.561919 GCACAAATTGACGTTATCCTGACAA 60.562 40.000 0.00 0.00 0.00 3.18
4981 5537 3.382855 TGCTGCTAACTTGCACAAATTG 58.617 40.909 0.00 0.00 38.12 2.32
5074 5633 5.422145 GCCTGATTCATGCCTACAAAATTT 58.578 37.500 2.79 0.00 0.00 1.82
5143 5702 8.662781 TCTGATAAAGCACAGGTTGAATATAC 57.337 34.615 0.00 0.00 35.20 1.47
5181 5740 3.252458 GTCAGGCATTTCACCGTTTAACT 59.748 43.478 0.00 0.00 0.00 2.24
5214 5773 0.171455 AAGAGTCACGCGACCAGATC 59.829 55.000 15.93 2.69 43.73 2.75
5215 5774 0.109086 CAAGAGTCACGCGACCAGAT 60.109 55.000 15.93 0.00 43.73 2.90
5220 5779 1.053811 GAGAACAAGAGTCACGCGAC 58.946 55.000 15.93 0.00 42.95 5.19
5244 5812 3.451141 TGATGCTGAAAACAACCCAAC 57.549 42.857 0.00 0.00 0.00 3.77
5250 5818 5.278610 CCTGTCAAGATGATGCTGAAAACAA 60.279 40.000 0.00 0.00 0.00 2.83
5340 5909 4.650734 TCTGTGCAATGGAAGATAACACA 58.349 39.130 0.00 0.00 35.46 3.72
5360 5930 3.977134 AAGATGATGCACACAGACTCT 57.023 42.857 0.00 0.00 0.00 3.24
5522 6096 1.431440 GTTAATGCCATTCGCGCCA 59.569 52.632 0.00 0.00 42.08 5.69
5629 6207 3.508793 TCTCCTCGTACTCCGATTTTGTT 59.491 43.478 0.00 0.00 46.23 2.83
5632 6210 3.068307 CCATCTCCTCGTACTCCGATTTT 59.932 47.826 0.00 0.00 46.23 1.82
5680 6258 7.795047 TCTACTGAGCATCTATTCAATGGAAA 58.205 34.615 0.00 0.00 34.00 3.13
5686 6264 7.725844 TGTCCTATCTACTGAGCATCTATTCAA 59.274 37.037 0.00 0.00 34.92 2.69
5691 6269 7.007116 ACATTGTCCTATCTACTGAGCATCTA 58.993 38.462 0.00 0.00 34.92 1.98
5694 6272 6.295011 GCTACATTGTCCTATCTACTGAGCAT 60.295 42.308 0.00 0.00 0.00 3.79
5745 6323 1.949799 ACCCCTAATTGCAATGCCAA 58.050 45.000 13.82 0.00 0.00 4.52
5752 6330 6.486056 TGTATAAGACAAACCCCTAATTGCA 58.514 36.000 0.00 0.00 34.15 4.08
5753 6331 7.399245 TTGTATAAGACAAACCCCTAATTGC 57.601 36.000 0.00 0.00 45.23 3.56
5861 6472 5.016173 TCGGGAAAAACTGAATCCATTCAT 58.984 37.500 2.45 0.00 44.92 2.57
5877 6488 2.419574 CGGCTAGAAAATCCTCGGGAAA 60.420 50.000 0.00 0.00 34.34 3.13
5878 6489 1.138266 CGGCTAGAAAATCCTCGGGAA 59.862 52.381 0.00 0.00 34.34 3.97
5879 6490 0.750850 CGGCTAGAAAATCCTCGGGA 59.249 55.000 0.00 0.00 35.55 5.14
5880 6491 0.750850 TCGGCTAGAAAATCCTCGGG 59.249 55.000 0.00 0.00 0.00 5.14
5881 6492 1.538419 GGTCGGCTAGAAAATCCTCGG 60.538 57.143 0.00 0.00 0.00 4.63
5882 6493 1.409427 AGGTCGGCTAGAAAATCCTCG 59.591 52.381 0.00 0.00 0.00 4.63
5883 6494 3.545366 AAGGTCGGCTAGAAAATCCTC 57.455 47.619 0.00 0.00 0.00 3.71
5884 6495 3.610911 CAAAGGTCGGCTAGAAAATCCT 58.389 45.455 0.00 0.00 0.00 3.24
5885 6496 2.097629 GCAAAGGTCGGCTAGAAAATCC 59.902 50.000 0.00 0.00 0.00 3.01
5886 6497 2.747446 TGCAAAGGTCGGCTAGAAAATC 59.253 45.455 0.00 0.00 0.00 2.17
5887 6498 2.790433 TGCAAAGGTCGGCTAGAAAAT 58.210 42.857 0.00 0.00 0.00 1.82
5888 6499 2.264005 TGCAAAGGTCGGCTAGAAAA 57.736 45.000 0.00 0.00 0.00 2.29
5889 6500 2.083774 CATGCAAAGGTCGGCTAGAAA 58.916 47.619 0.00 0.00 0.00 2.52
5890 6501 1.277842 TCATGCAAAGGTCGGCTAGAA 59.722 47.619 0.00 0.00 0.00 2.10
5891 6502 0.901827 TCATGCAAAGGTCGGCTAGA 59.098 50.000 0.00 0.00 0.00 2.43
5892 6503 1.398390 GTTCATGCAAAGGTCGGCTAG 59.602 52.381 0.00 0.00 0.00 3.42
5893 6504 1.448985 GTTCATGCAAAGGTCGGCTA 58.551 50.000 0.00 0.00 0.00 3.93
5894 6505 1.244019 GGTTCATGCAAAGGTCGGCT 61.244 55.000 0.00 0.00 0.00 5.52
5895 6506 1.212751 GGTTCATGCAAAGGTCGGC 59.787 57.895 0.00 0.00 0.00 5.54
5896 6507 1.200020 GAAGGTTCATGCAAAGGTCGG 59.800 52.381 0.00 0.00 0.00 4.79
5897 6508 1.200020 GGAAGGTTCATGCAAAGGTCG 59.800 52.381 0.00 0.00 0.00 4.79
5898 6509 2.519013 AGGAAGGTTCATGCAAAGGTC 58.481 47.619 0.00 0.00 0.00 3.85
5899 6510 2.629617 CAAGGAAGGTTCATGCAAAGGT 59.370 45.455 0.00 0.00 0.00 3.50
5900 6511 2.611224 GCAAGGAAGGTTCATGCAAAGG 60.611 50.000 12.36 0.00 39.70 3.11
5901 6512 2.036217 TGCAAGGAAGGTTCATGCAAAG 59.964 45.455 15.86 0.00 43.67 2.77
5902 6513 2.037901 TGCAAGGAAGGTTCATGCAAA 58.962 42.857 15.86 0.10 43.67 3.68
5903 6514 1.702182 TGCAAGGAAGGTTCATGCAA 58.298 45.000 15.86 4.77 43.67 4.08
5904 6515 3.435846 TGCAAGGAAGGTTCATGCA 57.564 47.368 14.79 14.79 44.09 3.96
5905 6516 3.323751 AAATGCAAGGAAGGTTCATGC 57.676 42.857 10.99 10.99 40.08 4.06
5906 6517 5.902613 TCTAAATGCAAGGAAGGTTCATG 57.097 39.130 0.00 0.00 0.00 3.07
5907 6518 6.916360 TTTCTAAATGCAAGGAAGGTTCAT 57.084 33.333 0.00 0.00 0.00 2.57
5908 6519 6.723298 TTTTCTAAATGCAAGGAAGGTTCA 57.277 33.333 0.00 0.00 0.00 3.18
5909 6520 7.872483 TGATTTTTCTAAATGCAAGGAAGGTTC 59.128 33.333 0.00 0.00 34.16 3.62
5910 6521 7.734942 TGATTTTTCTAAATGCAAGGAAGGTT 58.265 30.769 0.00 0.00 34.16 3.50
5911 6522 7.015584 ACTGATTTTTCTAAATGCAAGGAAGGT 59.984 33.333 0.00 0.00 34.16 3.50
5912 6523 7.381323 ACTGATTTTTCTAAATGCAAGGAAGG 58.619 34.615 0.00 0.00 34.16 3.46
5913 6524 8.084073 TGACTGATTTTTCTAAATGCAAGGAAG 58.916 33.333 0.00 0.00 34.16 3.46
5914 6525 7.950512 TGACTGATTTTTCTAAATGCAAGGAA 58.049 30.769 0.00 0.00 34.16 3.36
5915 6526 7.523293 TGACTGATTTTTCTAAATGCAAGGA 57.477 32.000 0.00 0.00 34.16 3.36
5916 6527 7.652909 TGTTGACTGATTTTTCTAAATGCAAGG 59.347 33.333 0.00 0.00 34.16 3.61
5917 6528 8.578308 TGTTGACTGATTTTTCTAAATGCAAG 57.422 30.769 0.00 0.00 34.16 4.01
5918 6529 8.939201 TTGTTGACTGATTTTTCTAAATGCAA 57.061 26.923 0.00 0.00 34.16 4.08
5919 6530 8.196771 ACTTGTTGACTGATTTTTCTAAATGCA 58.803 29.630 0.00 0.00 34.16 3.96
5920 6531 8.482429 CACTTGTTGACTGATTTTTCTAAATGC 58.518 33.333 0.00 0.00 34.16 3.56
5921 6532 9.520204 ACACTTGTTGACTGATTTTTCTAAATG 57.480 29.630 0.00 0.00 34.16 2.32
5922 6533 9.520204 CACACTTGTTGACTGATTTTTCTAAAT 57.480 29.630 0.00 0.00 36.68 1.40
5923 6534 8.735315 TCACACTTGTTGACTGATTTTTCTAAA 58.265 29.630 0.00 0.00 0.00 1.85
5924 6535 8.275015 TCACACTTGTTGACTGATTTTTCTAA 57.725 30.769 0.00 0.00 0.00 2.10
5925 6536 7.857734 TCACACTTGTTGACTGATTTTTCTA 57.142 32.000 0.00 0.00 0.00 2.10
5926 6537 6.757897 TCACACTTGTTGACTGATTTTTCT 57.242 33.333 0.00 0.00 0.00 2.52
5927 6538 7.250569 TCTTCACACTTGTTGACTGATTTTTC 58.749 34.615 0.00 0.00 0.00 2.29
5928 6539 7.156876 TCTTCACACTTGTTGACTGATTTTT 57.843 32.000 0.00 0.00 0.00 1.94
5929 6540 6.757897 TCTTCACACTTGTTGACTGATTTT 57.242 33.333 0.00 0.00 0.00 1.82
5930 6541 6.949352 ATCTTCACACTTGTTGACTGATTT 57.051 33.333 0.00 0.00 0.00 2.17
5931 6542 7.335422 GGATATCTTCACACTTGTTGACTGATT 59.665 37.037 2.05 0.00 0.00 2.57
5932 6543 6.820656 GGATATCTTCACACTTGTTGACTGAT 59.179 38.462 2.05 0.00 0.00 2.90
5933 6544 6.166279 GGATATCTTCACACTTGTTGACTGA 58.834 40.000 2.05 0.00 0.00 3.41
5934 6545 5.352569 GGGATATCTTCACACTTGTTGACTG 59.647 44.000 2.05 0.00 0.00 3.51
5935 6546 5.491982 GGGATATCTTCACACTTGTTGACT 58.508 41.667 2.05 0.00 0.00 3.41
5936 6547 4.636206 GGGGATATCTTCACACTTGTTGAC 59.364 45.833 2.05 0.00 0.00 3.18
5937 6548 4.536090 AGGGGATATCTTCACACTTGTTGA 59.464 41.667 2.05 0.00 0.00 3.18
5938 6549 4.848357 AGGGGATATCTTCACACTTGTTG 58.152 43.478 2.05 0.00 0.00 3.33
5939 6550 6.636454 TTAGGGGATATCTTCACACTTGTT 57.364 37.500 2.05 0.00 0.00 2.83
5940 6551 6.636454 TTTAGGGGATATCTTCACACTTGT 57.364 37.500 2.05 0.00 0.00 3.16
5941 6552 7.938140 TTTTTAGGGGATATCTTCACACTTG 57.062 36.000 2.05 0.00 0.00 3.16
5979 6590 9.850628 CTCATTTACTGAAATCATGACACAAAT 57.149 29.630 0.00 0.00 32.73 2.32
5980 6591 8.849168 ACTCATTTACTGAAATCATGACACAAA 58.151 29.630 0.00 0.00 32.73 2.83
5981 6592 8.394971 ACTCATTTACTGAAATCATGACACAA 57.605 30.769 0.00 0.00 32.73 3.33
5982 6593 7.984422 ACTCATTTACTGAAATCATGACACA 57.016 32.000 0.00 0.00 32.73 3.72
5983 6594 8.506437 TGAACTCATTTACTGAAATCATGACAC 58.494 33.333 0.00 0.00 32.73 3.67
5984 6595 8.620116 TGAACTCATTTACTGAAATCATGACA 57.380 30.769 0.00 0.00 32.73 3.58
5985 6596 9.499585 CATGAACTCATTTACTGAAATCATGAC 57.500 33.333 15.59 0.00 46.98 3.06
5989 6600 9.288576 ACTTCATGAACTCATTTACTGAAATCA 57.711 29.630 3.38 0.00 32.73 2.57
5993 6604 9.734620 CAAAACTTCATGAACTCATTTACTGAA 57.265 29.630 3.38 0.00 33.61 3.02
5994 6605 7.862372 GCAAAACTTCATGAACTCATTTACTGA 59.138 33.333 3.38 0.00 33.61 3.41
5995 6606 7.864379 AGCAAAACTTCATGAACTCATTTACTG 59.136 33.333 3.38 1.75 33.61 2.74
5996 6607 7.864379 CAGCAAAACTTCATGAACTCATTTACT 59.136 33.333 3.38 1.59 33.61 2.24
5997 6608 7.649306 ACAGCAAAACTTCATGAACTCATTTAC 59.351 33.333 3.38 0.00 33.61 2.01
5998 6609 7.715657 ACAGCAAAACTTCATGAACTCATTTA 58.284 30.769 3.38 0.00 33.61 1.40
5999 6610 6.576185 ACAGCAAAACTTCATGAACTCATTT 58.424 32.000 3.38 0.68 33.61 2.32
6000 6611 6.152932 ACAGCAAAACTTCATGAACTCATT 57.847 33.333 3.38 0.00 33.61 2.57
6001 6612 5.779529 ACAGCAAAACTTCATGAACTCAT 57.220 34.783 3.38 0.00 36.96 2.90
6002 6613 5.125257 TCAACAGCAAAACTTCATGAACTCA 59.875 36.000 3.38 0.00 0.00 3.41
6003 6614 5.581605 TCAACAGCAAAACTTCATGAACTC 58.418 37.500 3.38 0.00 0.00 3.01
6004 6615 5.581126 TCAACAGCAAAACTTCATGAACT 57.419 34.783 3.38 0.00 0.00 3.01
6005 6616 6.645700 TTTCAACAGCAAAACTTCATGAAC 57.354 33.333 3.38 0.00 0.00 3.18
6006 6617 8.816144 GTTATTTCAACAGCAAAACTTCATGAA 58.184 29.630 8.12 8.12 0.00 2.57
6007 6618 7.978414 TGTTATTTCAACAGCAAAACTTCATGA 59.022 29.630 0.00 0.00 0.00 3.07
6008 6619 8.129161 TGTTATTTCAACAGCAAAACTTCATG 57.871 30.769 0.00 0.00 0.00 3.07
6009 6620 8.715191 TTGTTATTTCAACAGCAAAACTTCAT 57.285 26.923 0.00 0.00 0.00 2.57
6010 6621 8.715191 ATTGTTATTTCAACAGCAAAACTTCA 57.285 26.923 0.00 0.00 0.00 3.02
6011 6622 9.424659 CAATTGTTATTTCAACAGCAAAACTTC 57.575 29.630 0.00 0.00 0.00 3.01
6012 6623 8.945057 ACAATTGTTATTTCAACAGCAAAACTT 58.055 25.926 4.92 0.00 0.00 2.66
6013 6624 8.389603 CACAATTGTTATTTCAACAGCAAAACT 58.610 29.630 8.77 0.00 0.00 2.66
6014 6625 8.386606 TCACAATTGTTATTTCAACAGCAAAAC 58.613 29.630 8.77 0.00 0.00 2.43
6015 6626 8.484641 TCACAATTGTTATTTCAACAGCAAAA 57.515 26.923 8.77 0.00 0.00 2.44
6016 6627 8.484641 TTCACAATTGTTATTTCAACAGCAAA 57.515 26.923 8.77 0.00 0.00 3.68
6017 6628 8.484641 TTTCACAATTGTTATTTCAACAGCAA 57.515 26.923 8.77 0.00 0.00 3.91
6018 6629 8.659925 ATTTCACAATTGTTATTTCAACAGCA 57.340 26.923 8.77 0.00 0.00 4.41
6019 6630 9.934190 AAATTTCACAATTGTTATTTCAACAGC 57.066 25.926 8.77 0.00 32.57 4.40
6027 6638 9.921637 ACCGACATAAATTTCACAATTGTTATT 57.078 25.926 8.77 6.45 32.57 1.40
6028 6639 9.567848 GACCGACATAAATTTCACAATTGTTAT 57.432 29.630 8.77 0.21 32.57 1.89
6029 6640 8.024285 GGACCGACATAAATTTCACAATTGTTA 58.976 33.333 8.77 0.00 32.57 2.41
6030 6641 6.866248 GGACCGACATAAATTTCACAATTGTT 59.134 34.615 8.77 0.00 32.57 2.83
6031 6642 6.208599 AGGACCGACATAAATTTCACAATTGT 59.791 34.615 4.92 4.92 32.57 2.71
6032 6643 6.620678 AGGACCGACATAAATTTCACAATTG 58.379 36.000 3.24 3.24 32.57 2.32
6033 6644 6.127730 GGAGGACCGACATAAATTTCACAATT 60.128 38.462 0.00 0.00 33.72 2.32
6034 6645 5.357032 GGAGGACCGACATAAATTTCACAAT 59.643 40.000 0.00 0.00 0.00 2.71
6035 6646 4.698304 GGAGGACCGACATAAATTTCACAA 59.302 41.667 0.00 0.00 0.00 3.33
6036 6647 4.019681 AGGAGGACCGACATAAATTTCACA 60.020 41.667 0.00 0.00 41.83 3.58
6037 6648 4.332819 CAGGAGGACCGACATAAATTTCAC 59.667 45.833 0.00 0.00 41.83 3.18
6038 6649 4.513442 CAGGAGGACCGACATAAATTTCA 58.487 43.478 0.00 0.00 41.83 2.69
6039 6650 3.877508 CCAGGAGGACCGACATAAATTTC 59.122 47.826 0.00 0.00 41.83 2.17
6040 6651 3.886123 CCAGGAGGACCGACATAAATTT 58.114 45.455 0.00 0.00 41.83 1.82
6041 6652 2.421529 GCCAGGAGGACCGACATAAATT 60.422 50.000 0.00 0.00 41.83 1.82
6042 6653 1.141053 GCCAGGAGGACCGACATAAAT 59.859 52.381 0.00 0.00 41.83 1.40
6043 6654 0.539986 GCCAGGAGGACCGACATAAA 59.460 55.000 0.00 0.00 41.83 1.40
6044 6655 0.325296 AGCCAGGAGGACCGACATAA 60.325 55.000 0.00 0.00 41.83 1.90
6045 6656 0.755698 GAGCCAGGAGGACCGACATA 60.756 60.000 0.00 0.00 41.83 2.29
6046 6657 2.039624 AGCCAGGAGGACCGACAT 59.960 61.111 0.00 0.00 41.83 3.06
6047 6658 2.680352 GAGCCAGGAGGACCGACA 60.680 66.667 0.00 0.00 41.83 4.35
6048 6659 3.462678 GGAGCCAGGAGGACCGAC 61.463 72.222 0.00 0.00 41.83 4.79
6049 6660 3.673597 AGGAGCCAGGAGGACCGA 61.674 66.667 0.00 0.00 41.83 4.69
6050 6661 3.465403 CAGGAGCCAGGAGGACCG 61.465 72.222 0.00 0.00 41.83 4.79
6051 6662 3.791586 GCAGGAGCCAGGAGGACC 61.792 72.222 0.00 0.00 36.89 4.46
6052 6663 4.154347 CGCAGGAGCCAGGAGGAC 62.154 72.222 0.00 0.00 37.52 3.85
6053 6664 3.296842 TACGCAGGAGCCAGGAGGA 62.297 63.158 0.00 0.00 37.52 3.71
6054 6665 2.759973 TACGCAGGAGCCAGGAGG 60.760 66.667 0.00 0.00 37.52 4.30
6055 6666 2.790791 CCTACGCAGGAGCCAGGAG 61.791 68.421 0.00 0.00 45.91 3.69
6056 6667 2.759973 CCTACGCAGGAGCCAGGA 60.760 66.667 0.00 0.00 45.91 3.86
6057 6668 3.854669 CCCTACGCAGGAGCCAGG 61.855 72.222 2.22 0.00 45.91 4.45
6058 6669 3.854669 CCCCTACGCAGGAGCCAG 61.855 72.222 2.22 0.00 45.91 4.85
6059 6670 4.715130 ACCCCTACGCAGGAGCCA 62.715 66.667 2.22 0.00 45.91 4.75
6060 6671 4.162690 CACCCCTACGCAGGAGCC 62.163 72.222 2.22 0.00 45.91 4.70
6061 6672 4.162690 CCACCCCTACGCAGGAGC 62.163 72.222 2.22 0.00 45.91 4.70
6062 6673 3.470888 CCCACCCCTACGCAGGAG 61.471 72.222 2.22 0.00 45.91 3.69
6065 6676 1.978455 TTATGCCCACCCCTACGCAG 61.978 60.000 0.00 0.00 34.15 5.18
6066 6677 1.563577 TTTATGCCCACCCCTACGCA 61.564 55.000 0.00 0.00 35.35 5.24
6067 6678 0.394625 TTTTATGCCCACCCCTACGC 60.395 55.000 0.00 0.00 0.00 4.42
6068 6679 1.746787 GTTTTTATGCCCACCCCTACG 59.253 52.381 0.00 0.00 0.00 3.51
6069 6680 2.758423 CAGTTTTTATGCCCACCCCTAC 59.242 50.000 0.00 0.00 0.00 3.18
6070 6681 2.291930 CCAGTTTTTATGCCCACCCCTA 60.292 50.000 0.00 0.00 0.00 3.53
6071 6682 1.552254 CCAGTTTTTATGCCCACCCCT 60.552 52.381 0.00 0.00 0.00 4.79
6072 6683 0.901827 CCAGTTTTTATGCCCACCCC 59.098 55.000 0.00 0.00 0.00 4.95
6073 6684 0.249120 GCCAGTTTTTATGCCCACCC 59.751 55.000 0.00 0.00 0.00 4.61
6074 6685 0.108851 CGCCAGTTTTTATGCCCACC 60.109 55.000 0.00 0.00 0.00 4.61
6075 6686 0.885196 TCGCCAGTTTTTATGCCCAC 59.115 50.000 0.00 0.00 0.00 4.61
6076 6687 1.271102 GTTCGCCAGTTTTTATGCCCA 59.729 47.619 0.00 0.00 0.00 5.36
6077 6688 1.403647 GGTTCGCCAGTTTTTATGCCC 60.404 52.381 0.00 0.00 37.19 5.36
6078 6689 1.731098 CGGTTCGCCAGTTTTTATGCC 60.731 52.381 0.00 0.00 37.00 4.40
6079 6690 1.198178 TCGGTTCGCCAGTTTTTATGC 59.802 47.619 0.00 0.00 37.00 3.14
6080 6691 3.119990 ACATCGGTTCGCCAGTTTTTATG 60.120 43.478 0.00 0.00 37.00 1.90
6081 6692 3.078837 ACATCGGTTCGCCAGTTTTTAT 58.921 40.909 0.00 0.00 37.00 1.40
6082 6693 2.496111 ACATCGGTTCGCCAGTTTTTA 58.504 42.857 0.00 0.00 37.00 1.52
6083 6694 1.314730 ACATCGGTTCGCCAGTTTTT 58.685 45.000 0.00 0.00 37.00 1.94
6084 6695 1.001815 CAACATCGGTTCGCCAGTTTT 60.002 47.619 0.00 0.00 34.21 2.43
6085 6696 0.591170 CAACATCGGTTCGCCAGTTT 59.409 50.000 0.00 0.00 34.21 2.66
6086 6697 0.250124 TCAACATCGGTTCGCCAGTT 60.250 50.000 0.00 0.00 34.21 3.16
6087 6698 0.250124 TTCAACATCGGTTCGCCAGT 60.250 50.000 0.00 0.00 34.21 4.00
6088 6699 0.871722 TTTCAACATCGGTTCGCCAG 59.128 50.000 0.00 0.00 34.21 4.85
6089 6700 0.589223 GTTTCAACATCGGTTCGCCA 59.411 50.000 0.00 0.00 34.21 5.69
6090 6701 0.109919 GGTTTCAACATCGGTTCGCC 60.110 55.000 0.00 0.00 34.21 5.54
6091 6702 0.452122 CGGTTTCAACATCGGTTCGC 60.452 55.000 0.00 0.00 34.21 4.70
6092 6703 1.141645 TCGGTTTCAACATCGGTTCG 58.858 50.000 0.00 0.00 34.21 3.95
6093 6704 3.824414 ATTCGGTTTCAACATCGGTTC 57.176 42.857 0.00 0.00 34.21 3.62
6094 6705 5.454520 GTTTATTCGGTTTCAACATCGGTT 58.545 37.500 0.00 0.00 37.87 4.44
6095 6706 4.083164 GGTTTATTCGGTTTCAACATCGGT 60.083 41.667 0.00 0.00 0.00 4.69
6096 6707 4.408694 GGTTTATTCGGTTTCAACATCGG 58.591 43.478 0.00 0.00 0.00 4.18
6097 6708 4.085884 CGGTTTATTCGGTTTCAACATCG 58.914 43.478 0.00 0.00 0.00 3.84
6098 6709 5.285798 TCGGTTTATTCGGTTTCAACATC 57.714 39.130 0.00 0.00 0.00 3.06
6099 6710 5.692613 TTCGGTTTATTCGGTTTCAACAT 57.307 34.783 0.00 0.00 0.00 2.71
6100 6711 5.496133 TTTCGGTTTATTCGGTTTCAACA 57.504 34.783 0.00 0.00 0.00 3.33
6101 6712 6.996562 AATTTCGGTTTATTCGGTTTCAAC 57.003 33.333 0.00 0.00 0.00 3.18
6102 6713 7.042658 CCAAAATTTCGGTTTATTCGGTTTCAA 60.043 33.333 0.00 0.00 0.00 2.69
6103 6714 6.421202 CCAAAATTTCGGTTTATTCGGTTTCA 59.579 34.615 0.00 0.00 0.00 2.69
6104 6715 6.421501 ACCAAAATTTCGGTTTATTCGGTTTC 59.578 34.615 0.00 0.00 28.43 2.78
6105 6716 6.282167 ACCAAAATTTCGGTTTATTCGGTTT 58.718 32.000 0.00 0.00 28.43 3.27
6106 6717 5.845103 ACCAAAATTTCGGTTTATTCGGTT 58.155 33.333 0.00 0.00 28.43 4.44
6107 6718 5.456548 ACCAAAATTTCGGTTTATTCGGT 57.543 34.783 0.00 0.00 28.43 4.69
6135 6746 9.106070 GAAAACCGGATTTTACTGTCATAGTAT 57.894 33.333 9.46 0.00 40.73 2.12
6136 6747 8.095792 TGAAAACCGGATTTTACTGTCATAGTA 58.904 33.333 9.46 0.00 40.73 1.82
6137 6748 6.938030 TGAAAACCGGATTTTACTGTCATAGT 59.062 34.615 9.46 0.00 40.73 2.12
6138 6749 7.372451 TGAAAACCGGATTTTACTGTCATAG 57.628 36.000 9.46 0.00 40.73 2.23
6139 6750 7.446013 ACTTGAAAACCGGATTTTACTGTCATA 59.554 33.333 9.46 0.00 40.73 2.15
6140 6751 6.264518 ACTTGAAAACCGGATTTTACTGTCAT 59.735 34.615 9.46 0.00 40.73 3.06
6141 6752 5.591067 ACTTGAAAACCGGATTTTACTGTCA 59.409 36.000 9.46 0.00 40.73 3.58
6142 6753 6.068473 ACTTGAAAACCGGATTTTACTGTC 57.932 37.500 9.46 0.00 40.73 3.51
6143 6754 5.009310 GGACTTGAAAACCGGATTTTACTGT 59.991 40.000 9.46 7.46 40.73 3.55
6144 6755 5.009210 TGGACTTGAAAACCGGATTTTACTG 59.991 40.000 9.46 4.09 40.73 2.74
6145 6756 5.134661 TGGACTTGAAAACCGGATTTTACT 58.865 37.500 9.46 0.00 40.73 2.24
6146 6757 5.441709 TGGACTTGAAAACCGGATTTTAC 57.558 39.130 9.46 0.00 40.73 2.01
6147 6758 6.658188 ATTGGACTTGAAAACCGGATTTTA 57.342 33.333 9.46 2.07 40.73 1.52
6148 6759 5.545063 ATTGGACTTGAAAACCGGATTTT 57.455 34.783 9.46 11.56 43.44 1.82
6149 6760 6.452242 GTTATTGGACTTGAAAACCGGATTT 58.548 36.000 9.46 9.64 0.00 2.17
6150 6761 5.047590 GGTTATTGGACTTGAAAACCGGATT 60.048 40.000 9.46 0.00 0.00 3.01
6151 6762 4.461431 GGTTATTGGACTTGAAAACCGGAT 59.539 41.667 9.46 0.00 0.00 4.18
6152 6763 3.822167 GGTTATTGGACTTGAAAACCGGA 59.178 43.478 9.46 0.00 0.00 5.14
6153 6764 4.168922 GGTTATTGGACTTGAAAACCGG 57.831 45.455 0.00 0.00 0.00 5.28
6155 6766 5.217393 GTTCGGTTATTGGACTTGAAAACC 58.783 41.667 0.00 0.00 34.38 3.27
6156 6767 5.823353 TGTTCGGTTATTGGACTTGAAAAC 58.177 37.500 0.00 0.00 0.00 2.43
6157 6768 6.452494 TTGTTCGGTTATTGGACTTGAAAA 57.548 33.333 0.00 0.00 0.00 2.29
6158 6769 6.452494 TTTGTTCGGTTATTGGACTTGAAA 57.548 33.333 0.00 0.00 0.00 2.69
6159 6770 6.452494 TTTTGTTCGGTTATTGGACTTGAA 57.548 33.333 0.00 0.00 0.00 2.69
6160 6771 6.642707 ATTTTGTTCGGTTATTGGACTTGA 57.357 33.333 0.00 0.00 0.00 3.02
6161 6772 6.920758 TGAATTTTGTTCGGTTATTGGACTTG 59.079 34.615 0.00 0.00 0.00 3.16
6162 6773 7.045126 TGAATTTTGTTCGGTTATTGGACTT 57.955 32.000 0.00 0.00 0.00 3.01
6163 6774 6.642707 TGAATTTTGTTCGGTTATTGGACT 57.357 33.333 0.00 0.00 0.00 3.85
6164 6775 7.436970 ACTTTGAATTTTGTTCGGTTATTGGAC 59.563 33.333 0.00 0.00 0.00 4.02
6165 6776 7.493367 ACTTTGAATTTTGTTCGGTTATTGGA 58.507 30.769 0.00 0.00 0.00 3.53
6166 6777 7.707774 ACTTTGAATTTTGTTCGGTTATTGG 57.292 32.000 0.00 0.00 0.00 3.16
6167 6778 9.672086 TCTACTTTGAATTTTGTTCGGTTATTG 57.328 29.630 0.00 0.00 0.00 1.90
6171 6782 9.030301 CAATTCTACTTTGAATTTTGTTCGGTT 57.970 29.630 0.00 0.00 42.63 4.44
6172 6783 8.410141 TCAATTCTACTTTGAATTTTGTTCGGT 58.590 29.630 0.00 0.00 42.63 4.69
6173 6784 8.795786 TCAATTCTACTTTGAATTTTGTTCGG 57.204 30.769 0.00 0.00 42.63 4.30
6183 6794 9.778741 ACTAGTGTGATTCAATTCTACTTTGAA 57.221 29.630 0.00 1.76 44.60 2.69
6193 6804 9.174166 GGGTATTTGTACTAGTGTGATTCAATT 57.826 33.333 5.39 1.87 0.00 2.32
6194 6805 7.494625 CGGGTATTTGTACTAGTGTGATTCAAT 59.505 37.037 5.39 0.00 0.00 2.57
6195 6806 6.814644 CGGGTATTTGTACTAGTGTGATTCAA 59.185 38.462 5.39 0.00 0.00 2.69
6196 6807 6.071221 ACGGGTATTTGTACTAGTGTGATTCA 60.071 38.462 5.39 0.00 0.00 2.57
6197 6808 6.255020 CACGGGTATTTGTACTAGTGTGATTC 59.745 42.308 5.39 0.00 0.00 2.52
6198 6809 6.103997 CACGGGTATTTGTACTAGTGTGATT 58.896 40.000 5.39 0.00 0.00 2.57
6203 6814 2.855963 CGCACGGGTATTTGTACTAGTG 59.144 50.000 5.39 0.00 33.78 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.