Multiple sequence alignment - TraesCS1B01G331100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G331100 chr1B 100.000 2360 0 0 1 2360 556966359 556968718 0.000000e+00 4359
1 TraesCS1B01G331100 chr1B 92.617 894 55 6 820 1709 556252040 556252926 0.000000e+00 1275
2 TraesCS1B01G331100 chr1B 92.377 892 57 10 820 1707 556663757 556664641 0.000000e+00 1260
3 TraesCS1B01G331100 chr1B 91.499 894 64 7 820 1709 556834714 556835599 0.000000e+00 1219
4 TraesCS1B01G331100 chr1B 91.499 894 64 7 820 1709 556863135 556864020 0.000000e+00 1219
5 TraesCS1B01G331100 chr1B 97.321 560 15 0 1 560 556064255 556063696 0.000000e+00 952
6 TraesCS1B01G331100 chr1B 96.610 413 14 0 149 561 556834311 556834723 0.000000e+00 686
7 TraesCS1B01G331100 chr1B 96.610 413 14 0 149 561 556862732 556863144 0.000000e+00 686
8 TraesCS1B01G331100 chr1B 88.489 417 43 5 1719 2131 566126271 566125856 1.260000e-137 499
9 TraesCS1B01G331100 chr1B 88.341 223 24 2 2138 2360 556267306 556267526 1.390000e-67 267
10 TraesCS1B01G331100 chr1B 87.892 223 25 2 2138 2360 556306853 556307073 6.470000e-66 261
11 TraesCS1B01G331100 chr1D 92.231 901 54 10 820 1715 412642848 412643737 0.000000e+00 1262
12 TraesCS1B01G331100 chr1D 92.231 901 54 10 820 1715 412746826 412747715 0.000000e+00 1262
13 TraesCS1B01G331100 chr1D 92.231 901 54 10 820 1715 412763989 412764878 0.000000e+00 1262
14 TraesCS1B01G331100 chr1D 92.385 893 57 5 820 1712 412855406 412856287 0.000000e+00 1262
15 TraesCS1B01G331100 chr1D 93.264 579 20 6 1 561 412642280 412642857 0.000000e+00 835
16 TraesCS1B01G331100 chr1D 92.919 579 22 6 1 561 412660536 412661113 0.000000e+00 824
17 TraesCS1B01G331100 chr1D 86.222 225 20 9 2137 2360 412767615 412767829 1.410000e-57 233
18 TraesCS1B01G331100 chr1D 85.333 225 22 9 2137 2360 412751115 412751329 3.050000e-54 222
19 TraesCS1B01G331100 chr1D 84.513 226 20 10 2136 2360 412646589 412646800 2.380000e-50 209
20 TraesCS1B01G331100 chr1D 93.478 92 6 0 2137 2228 412770721 412770812 1.140000e-28 137
21 TraesCS1B01G331100 chr1A 90.929 904 63 12 820 1715 509914168 509913276 0.000000e+00 1197
22 TraesCS1B01G331100 chr1A 93.520 571 25 6 1 561 509719845 509719277 0.000000e+00 839
23 TraesCS1B01G331100 chr1A 93.520 571 25 6 1 561 509793225 509792657 0.000000e+00 839
24 TraesCS1B01G331100 chr1A 93.158 570 30 3 1 561 509849370 509848801 0.000000e+00 828
25 TraesCS1B01G331100 chr1A 93.007 572 29 4 1 561 509914730 509914159 0.000000e+00 824
26 TraesCS1B01G331100 chr1A 84.000 225 32 4 2136 2360 509702018 509701798 1.840000e-51 213
27 TraesCS1B01G331100 chr1A 84.000 225 32 4 2136 2360 509775267 509775047 1.840000e-51 213
28 TraesCS1B01G331100 chr1A 83.556 225 33 4 2136 2360 509492142 509491922 8.550000e-50 207
29 TraesCS1B01G331100 chr4B 96.283 565 15 5 1 560 633466131 633466694 0.000000e+00 922
30 TraesCS1B01G331100 chr4B 95.752 565 18 5 1 560 633398999 633399562 0.000000e+00 905
31 TraesCS1B01G331100 chr4B 89.486 428 36 5 1716 2134 122566123 122566550 1.240000e-147 532
32 TraesCS1B01G331100 chr7D 91.529 425 26 5 1714 2133 611009515 611009096 5.660000e-161 577
33 TraesCS1B01G331100 chr7D 87.972 424 41 8 1716 2132 579096283 579096703 2.110000e-135 492
34 TraesCS1B01G331100 chr7D 92.996 257 15 1 564 820 598726966 598726713 2.860000e-99 372
35 TraesCS1B01G331100 chr7D 92.636 258 16 3 564 821 596938401 596938147 3.710000e-98 368
36 TraesCS1B01G331100 chr7D 92.308 260 17 1 564 823 45518717 45518461 1.330000e-97 366
37 TraesCS1B01G331100 chr7D 92.218 257 17 3 564 820 571977633 571977886 6.200000e-96 361
38 TraesCS1B01G331100 chr7D 91.860 258 17 4 564 821 591389221 591389474 8.020000e-95 357
39 TraesCS1B01G331100 chr5B 89.362 423 38 5 1718 2134 523194922 523195343 2.080000e-145 525
40 TraesCS1B01G331100 chr6A 89.176 425 39 6 1718 2136 584677135 584677558 7.470000e-145 523
41 TraesCS1B01G331100 chr6A 88.498 426 35 11 1717 2133 13965227 13964807 9.740000e-139 503
42 TraesCS1B01G331100 chr5D 88.318 428 37 10 1716 2133 341239919 341240343 3.500000e-138 501
43 TraesCS1B01G331100 chr5D 91.078 269 20 2 564 832 7038338 7038602 6.200000e-96 361
44 TraesCS1B01G331100 chr5D 91.321 265 19 4 556 820 447189398 447189658 2.230000e-95 359
45 TraesCS1B01G331100 chr4D 87.736 424 44 6 1713 2133 40758385 40758803 2.730000e-134 488
46 TraesCS1B01G331100 chr7B 92.996 257 15 1 564 820 740313851 740313598 2.860000e-99 372
47 TraesCS1B01G331100 chrUn 92.636 258 16 3 564 821 384802483 384802229 3.710000e-98 368


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G331100 chr1B 556966359 556968718 2359 False 4359.000000 4359 100.000000 1 2360 1 chr1B.!!$F5 2359
1 TraesCS1B01G331100 chr1B 556252040 556252926 886 False 1275.000000 1275 92.617000 820 1709 1 chr1B.!!$F1 889
2 TraesCS1B01G331100 chr1B 556663757 556664641 884 False 1260.000000 1260 92.377000 820 1707 1 chr1B.!!$F4 887
3 TraesCS1B01G331100 chr1B 556834311 556835599 1288 False 952.500000 1219 94.054500 149 1709 2 chr1B.!!$F6 1560
4 TraesCS1B01G331100 chr1B 556862732 556864020 1288 False 952.500000 1219 94.054500 149 1709 2 chr1B.!!$F7 1560
5 TraesCS1B01G331100 chr1B 556063696 556064255 559 True 952.000000 952 97.321000 1 560 1 chr1B.!!$R1 559
6 TraesCS1B01G331100 chr1D 412855406 412856287 881 False 1262.000000 1262 92.385000 820 1712 1 chr1D.!!$F2 892
7 TraesCS1B01G331100 chr1D 412660536 412661113 577 False 824.000000 824 92.919000 1 561 1 chr1D.!!$F1 560
8 TraesCS1B01G331100 chr1D 412642280 412646800 4520 False 768.666667 1262 90.002667 1 2360 3 chr1D.!!$F3 2359
9 TraesCS1B01G331100 chr1D 412746826 412751329 4503 False 742.000000 1262 88.782000 820 2360 2 chr1D.!!$F4 1540
10 TraesCS1B01G331100 chr1D 412763989 412770812 6823 False 544.000000 1262 90.643667 820 2360 3 chr1D.!!$F5 1540
11 TraesCS1B01G331100 chr1A 509913276 509914730 1454 True 1010.500000 1197 91.968000 1 1715 2 chr1A.!!$R7 1714
12 TraesCS1B01G331100 chr1A 509719277 509719845 568 True 839.000000 839 93.520000 1 561 1 chr1A.!!$R3 560
13 TraesCS1B01G331100 chr1A 509792657 509793225 568 True 839.000000 839 93.520000 1 561 1 chr1A.!!$R5 560
14 TraesCS1B01G331100 chr1A 509848801 509849370 569 True 828.000000 828 93.158000 1 561 1 chr1A.!!$R6 560
15 TraesCS1B01G331100 chr4B 633466131 633466694 563 False 922.000000 922 96.283000 1 560 1 chr4B.!!$F3 559
16 TraesCS1B01G331100 chr4B 633398999 633399562 563 False 905.000000 905 95.752000 1 560 1 chr4B.!!$F2 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
806 827 0.036164 TCGGTTGAACCATGGTCCTG 59.964 55.0 20.07 11.58 38.47 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2106 7105 0.108472 GCATTTTGGAGCTTGGCCTC 60.108 55.0 3.32 0.0 0.0 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
313 324 3.222354 GAACCAGACGCTCCGTGGT 62.222 63.158 0.00 0.00 41.37 4.16
341 352 2.119611 TCGAGAGGGTGAAGGCCA 59.880 61.111 5.01 0.00 0.00 5.36
451 468 5.658190 AGTACTAGGCCATTTTGCAAATGAT 59.342 36.000 13.65 1.14 0.00 2.45
560 581 2.742372 GACGGCAGCGTGTCCATT 60.742 61.111 5.32 0.00 0.00 3.16
561 582 2.740714 GACGGCAGCGTGTCCATTC 61.741 63.158 5.32 0.00 0.00 2.67
562 583 2.434884 CGGCAGCGTGTCCATTCT 60.435 61.111 0.00 0.00 0.00 2.40
563 584 1.153647 CGGCAGCGTGTCCATTCTA 60.154 57.895 0.00 0.00 0.00 2.10
564 585 0.739462 CGGCAGCGTGTCCATTCTAA 60.739 55.000 0.00 0.00 0.00 2.10
565 586 1.448985 GGCAGCGTGTCCATTCTAAA 58.551 50.000 0.00 0.00 0.00 1.85
566 587 1.810151 GGCAGCGTGTCCATTCTAAAA 59.190 47.619 0.00 0.00 0.00 1.52
567 588 2.423538 GGCAGCGTGTCCATTCTAAAAT 59.576 45.455 0.00 0.00 0.00 1.82
568 589 3.429085 GCAGCGTGTCCATTCTAAAATG 58.571 45.455 0.00 0.00 41.69 2.32
569 590 3.119849 GCAGCGTGTCCATTCTAAAATGT 60.120 43.478 0.00 0.00 40.63 2.71
570 591 4.615912 GCAGCGTGTCCATTCTAAAATGTT 60.616 41.667 0.00 0.00 40.63 2.71
571 592 5.460646 CAGCGTGTCCATTCTAAAATGTTT 58.539 37.500 0.00 0.00 40.63 2.83
572 593 5.920273 CAGCGTGTCCATTCTAAAATGTTTT 59.080 36.000 0.00 0.00 40.63 2.43
573 594 7.081349 CAGCGTGTCCATTCTAAAATGTTTTA 58.919 34.615 0.00 0.00 40.63 1.52
574 595 7.060633 CAGCGTGTCCATTCTAAAATGTTTTAC 59.939 37.037 0.00 0.00 40.63 2.01
575 596 6.858993 GCGTGTCCATTCTAAAATGTTTTACA 59.141 34.615 0.00 0.00 40.63 2.41
576 597 7.060633 GCGTGTCCATTCTAAAATGTTTTACAG 59.939 37.037 0.00 0.00 40.63 2.74
577 598 8.286800 CGTGTCCATTCTAAAATGTTTTACAGA 58.713 33.333 0.00 0.00 40.63 3.41
578 599 9.959749 GTGTCCATTCTAAAATGTTTTACAGAA 57.040 29.630 6.11 6.11 40.63 3.02
579 600 9.959749 TGTCCATTCTAAAATGTTTTACAGAAC 57.040 29.630 5.88 0.00 40.63 3.01
580 601 9.406828 GTCCATTCTAAAATGTTTTACAGAACC 57.593 33.333 5.88 0.00 40.63 3.62
581 602 9.137459 TCCATTCTAAAATGTTTTACAGAACCA 57.863 29.630 5.88 0.00 40.63 3.67
582 603 9.927668 CCATTCTAAAATGTTTTACAGAACCAT 57.072 29.630 5.88 0.00 40.63 3.55
584 605 9.927668 ATTCTAAAATGTTTTACAGAACCATGG 57.072 29.630 11.19 11.19 31.37 3.66
585 606 8.472007 TCTAAAATGTTTTACAGAACCATGGT 57.528 30.769 13.00 13.00 0.00 3.55
586 607 8.919145 TCTAAAATGTTTTACAGAACCATGGTT 58.081 29.630 30.23 30.23 41.54 3.67
602 623 3.908737 GTTCAGCCGAACCTACACT 57.091 52.632 1.04 0.00 44.92 3.55
603 624 1.711206 GTTCAGCCGAACCTACACTC 58.289 55.000 1.04 0.00 44.92 3.51
604 625 0.242825 TTCAGCCGAACCTACACTCG 59.757 55.000 0.00 0.00 34.83 4.18
605 626 0.607217 TCAGCCGAACCTACACTCGA 60.607 55.000 0.00 0.00 37.23 4.04
606 627 0.456312 CAGCCGAACCTACACTCGAC 60.456 60.000 0.00 0.00 37.23 4.20
607 628 0.892358 AGCCGAACCTACACTCGACA 60.892 55.000 0.00 0.00 37.23 4.35
608 629 0.731855 GCCGAACCTACACTCGACAC 60.732 60.000 0.00 0.00 37.23 3.67
609 630 0.109412 CCGAACCTACACTCGACACC 60.109 60.000 0.00 0.00 37.23 4.16
610 631 0.594602 CGAACCTACACTCGACACCA 59.405 55.000 0.00 0.00 37.23 4.17
611 632 1.201647 CGAACCTACACTCGACACCAT 59.798 52.381 0.00 0.00 37.23 3.55
612 633 2.352421 CGAACCTACACTCGACACCATT 60.352 50.000 0.00 0.00 37.23 3.16
613 634 2.743636 ACCTACACTCGACACCATTG 57.256 50.000 0.00 0.00 0.00 2.82
614 635 2.244695 ACCTACACTCGACACCATTGA 58.755 47.619 0.00 0.00 0.00 2.57
615 636 2.832129 ACCTACACTCGACACCATTGAT 59.168 45.455 0.00 0.00 0.00 2.57
616 637 3.260884 ACCTACACTCGACACCATTGATT 59.739 43.478 0.00 0.00 0.00 2.57
617 638 4.253685 CCTACACTCGACACCATTGATTT 58.746 43.478 0.00 0.00 0.00 2.17
618 639 4.330074 CCTACACTCGACACCATTGATTTC 59.670 45.833 0.00 0.00 0.00 2.17
619 640 4.008074 ACACTCGACACCATTGATTTCT 57.992 40.909 0.00 0.00 0.00 2.52
620 641 5.147330 ACACTCGACACCATTGATTTCTA 57.853 39.130 0.00 0.00 0.00 2.10
621 642 5.547465 ACACTCGACACCATTGATTTCTAA 58.453 37.500 0.00 0.00 0.00 2.10
622 643 5.995282 ACACTCGACACCATTGATTTCTAAA 59.005 36.000 0.00 0.00 0.00 1.85
623 644 6.073222 ACACTCGACACCATTGATTTCTAAAC 60.073 38.462 0.00 0.00 0.00 2.01
624 645 5.995282 ACTCGACACCATTGATTTCTAAACA 59.005 36.000 0.00 0.00 0.00 2.83
625 646 6.073222 ACTCGACACCATTGATTTCTAAACAC 60.073 38.462 0.00 0.00 0.00 3.32
626 647 5.995282 TCGACACCATTGATTTCTAAACACT 59.005 36.000 0.00 0.00 0.00 3.55
627 648 7.156000 TCGACACCATTGATTTCTAAACACTA 58.844 34.615 0.00 0.00 0.00 2.74
628 649 7.822334 TCGACACCATTGATTTCTAAACACTAT 59.178 33.333 0.00 0.00 0.00 2.12
629 650 8.450964 CGACACCATTGATTTCTAAACACTATT 58.549 33.333 0.00 0.00 0.00 1.73
630 651 9.774742 GACACCATTGATTTCTAAACACTATTC 57.225 33.333 0.00 0.00 0.00 1.75
631 652 9.295825 ACACCATTGATTTCTAAACACTATTCA 57.704 29.630 0.00 0.00 0.00 2.57
645 666 8.523915 AAACACTATTCATAAGGATTCATGCA 57.476 30.769 0.00 0.00 0.00 3.96
646 667 8.701908 AACACTATTCATAAGGATTCATGCAT 57.298 30.769 0.00 0.00 0.00 3.96
647 668 8.107399 ACACTATTCATAAGGATTCATGCATG 57.893 34.615 21.07 21.07 0.00 4.06
648 669 7.176165 ACACTATTCATAAGGATTCATGCATGG 59.824 37.037 25.97 8.24 0.00 3.66
649 670 7.176165 CACTATTCATAAGGATTCATGCATGGT 59.824 37.037 25.97 15.28 0.00 3.55
650 671 6.585695 ATTCATAAGGATTCATGCATGGTC 57.414 37.500 25.97 21.81 0.00 4.02
651 672 4.067192 TCATAAGGATTCATGCATGGTCG 58.933 43.478 25.97 11.27 0.00 4.79
652 673 2.715749 AAGGATTCATGCATGGTCGA 57.284 45.000 25.97 10.61 0.00 4.20
653 674 2.945080 AGGATTCATGCATGGTCGAT 57.055 45.000 25.97 14.59 0.00 3.59
654 675 3.219176 AGGATTCATGCATGGTCGATT 57.781 42.857 25.97 10.83 0.00 3.34
655 676 4.356405 AGGATTCATGCATGGTCGATTA 57.644 40.909 25.97 2.13 0.00 1.75
656 677 4.717877 AGGATTCATGCATGGTCGATTAA 58.282 39.130 25.97 11.64 0.00 1.40
657 678 5.132502 AGGATTCATGCATGGTCGATTAAA 58.867 37.500 25.97 10.91 0.00 1.52
658 679 5.593909 AGGATTCATGCATGGTCGATTAAAA 59.406 36.000 25.97 10.20 0.00 1.52
659 680 6.096705 AGGATTCATGCATGGTCGATTAAAAA 59.903 34.615 25.97 9.48 0.00 1.94
692 713 8.549338 AGTTGATATGCATGTCTATTCATGAG 57.451 34.615 22.09 0.00 45.41 2.90
693 714 7.606839 AGTTGATATGCATGTCTATTCATGAGG 59.393 37.037 22.09 0.00 45.41 3.86
694 715 7.248743 TGATATGCATGTCTATTCATGAGGA 57.751 36.000 22.09 0.00 45.41 3.71
695 716 7.858498 TGATATGCATGTCTATTCATGAGGAT 58.142 34.615 22.09 0.00 45.41 3.24
696 717 7.985752 TGATATGCATGTCTATTCATGAGGATC 59.014 37.037 22.09 6.52 45.41 3.36
697 718 4.903054 TGCATGTCTATTCATGAGGATCC 58.097 43.478 2.48 2.48 45.41 3.36
698 719 4.348754 TGCATGTCTATTCATGAGGATCCA 59.651 41.667 15.82 0.00 45.41 3.41
699 720 5.013808 TGCATGTCTATTCATGAGGATCCAT 59.986 40.000 15.82 0.00 45.41 3.41
700 721 5.354513 GCATGTCTATTCATGAGGATCCATG 59.645 44.000 15.82 10.15 45.41 3.66
701 722 4.903054 TGTCTATTCATGAGGATCCATGC 58.097 43.478 15.82 3.29 42.63 4.06
702 723 4.348754 TGTCTATTCATGAGGATCCATGCA 59.651 41.667 15.82 9.47 42.63 3.96
703 724 5.013808 TGTCTATTCATGAGGATCCATGCAT 59.986 40.000 15.82 11.45 42.63 3.96
704 725 5.354513 GTCTATTCATGAGGATCCATGCATG 59.645 44.000 24.86 24.86 42.63 4.06
719 740 6.838198 CCATGCATGGTTGATTAAGAAATG 57.162 37.500 33.68 5.86 43.05 2.32
720 741 5.235616 CCATGCATGGTTGATTAAGAAATGC 59.764 40.000 33.68 0.00 43.05 3.56
721 742 5.402997 TGCATGGTTGATTAAGAAATGCA 57.597 34.783 9.16 9.16 39.74 3.96
722 743 5.170021 TGCATGGTTGATTAAGAAATGCAC 58.830 37.500 9.16 0.00 37.56 4.57
723 744 5.047164 TGCATGGTTGATTAAGAAATGCACT 60.047 36.000 9.16 0.00 37.56 4.40
724 745 5.870978 GCATGGTTGATTAAGAAATGCACTT 59.129 36.000 0.00 0.00 33.25 3.16
725 746 6.183360 GCATGGTTGATTAAGAAATGCACTTG 60.183 38.462 0.00 0.00 33.25 3.16
726 747 5.782047 TGGTTGATTAAGAAATGCACTTGG 58.218 37.500 0.00 0.00 0.00 3.61
727 748 4.627035 GGTTGATTAAGAAATGCACTTGGC 59.373 41.667 0.00 0.00 45.13 4.52
736 757 4.489249 GCACTTGGCATGCATGTC 57.511 55.556 24.40 24.40 42.88 3.06
737 758 1.587568 GCACTTGGCATGCATGTCA 59.412 52.632 29.45 29.45 42.88 3.58
738 759 0.734942 GCACTTGGCATGCATGTCAC 60.735 55.000 32.61 17.86 42.90 3.67
739 760 0.599060 CACTTGGCATGCATGTCACA 59.401 50.000 32.61 22.14 42.90 3.58
740 761 1.203758 CACTTGGCATGCATGTCACAT 59.796 47.619 32.61 20.64 42.90 3.21
741 762 2.424246 CACTTGGCATGCATGTCACATA 59.576 45.455 32.61 17.96 42.90 2.29
742 763 3.067601 CACTTGGCATGCATGTCACATAT 59.932 43.478 32.61 15.63 42.90 1.78
743 764 3.317149 ACTTGGCATGCATGTCACATATC 59.683 43.478 32.61 10.61 42.90 1.63
744 765 2.232399 TGGCATGCATGTCACATATCC 58.768 47.619 29.45 17.76 37.51 2.59
745 766 2.232399 GGCATGCATGTCACATATCCA 58.768 47.619 26.04 0.00 31.41 3.41
746 767 2.030540 GGCATGCATGTCACATATCCAC 60.031 50.000 26.04 5.26 31.41 4.02
747 768 2.619646 GCATGCATGTCACATATCCACA 59.380 45.455 26.79 0.00 0.00 4.17
748 769 3.254903 GCATGCATGTCACATATCCACAT 59.745 43.478 26.79 0.00 0.00 3.21
749 770 4.794169 CATGCATGTCACATATCCACATG 58.206 43.478 18.91 11.48 46.86 3.21
750 771 3.888583 TGCATGTCACATATCCACATGT 58.111 40.909 15.05 0.00 46.17 3.21
751 772 5.033589 TGCATGTCACATATCCACATGTA 57.966 39.130 15.05 10.49 46.17 2.29
752 773 5.058490 TGCATGTCACATATCCACATGTAG 58.942 41.667 15.05 0.00 46.17 2.74
753 774 5.059161 GCATGTCACATATCCACATGTAGT 58.941 41.667 15.05 0.00 46.17 2.73
754 775 6.183360 TGCATGTCACATATCCACATGTAGTA 60.183 38.462 15.05 0.00 46.17 1.82
755 776 6.705825 GCATGTCACATATCCACATGTAGTAA 59.294 38.462 15.05 0.00 46.17 2.24
756 777 7.095481 GCATGTCACATATCCACATGTAGTAAG 60.095 40.741 15.05 0.00 46.17 2.34
757 778 7.654022 TGTCACATATCCACATGTAGTAAGA 57.346 36.000 0.00 0.00 37.02 2.10
758 779 8.250143 TGTCACATATCCACATGTAGTAAGAT 57.750 34.615 0.00 0.00 37.02 2.40
759 780 8.143835 TGTCACATATCCACATGTAGTAAGATG 58.856 37.037 0.00 0.79 37.02 2.90
760 781 8.144478 GTCACATATCCACATGTAGTAAGATGT 58.856 37.037 0.00 1.43 40.06 3.06
761 782 8.704668 TCACATATCCACATGTAGTAAGATGTT 58.295 33.333 0.00 0.00 37.50 2.71
762 783 9.981114 CACATATCCACATGTAGTAAGATGTTA 57.019 33.333 0.00 0.00 37.50 2.41
767 788 8.642908 TCCACATGTAGTAAGATGTTAAATCG 57.357 34.615 0.00 0.00 37.50 3.34
768 789 8.255206 TCCACATGTAGTAAGATGTTAAATCGT 58.745 33.333 0.00 0.00 37.50 3.73
769 790 9.524106 CCACATGTAGTAAGATGTTAAATCGTA 57.476 33.333 0.00 0.00 37.50 3.43
771 792 9.229784 ACATGTAGTAAGATGTTAAATCGTACG 57.770 33.333 9.53 9.53 36.23 3.67
772 793 8.688184 CATGTAGTAAGATGTTAAATCGTACGG 58.312 37.037 16.52 0.00 37.81 4.02
773 794 6.692681 TGTAGTAAGATGTTAAATCGTACGGC 59.307 38.462 16.52 0.16 37.81 5.68
774 795 5.653507 AGTAAGATGTTAAATCGTACGGCA 58.346 37.500 16.52 0.00 37.81 5.69
775 796 6.278363 AGTAAGATGTTAAATCGTACGGCAT 58.722 36.000 16.52 10.10 37.81 4.40
776 797 7.428020 AGTAAGATGTTAAATCGTACGGCATA 58.572 34.615 16.52 3.15 37.81 3.14
777 798 6.764877 AAGATGTTAAATCGTACGGCATAG 57.235 37.500 16.52 0.00 0.00 2.23
778 799 6.080648 AGATGTTAAATCGTACGGCATAGA 57.919 37.500 16.52 0.00 0.00 1.98
779 800 5.919141 AGATGTTAAATCGTACGGCATAGAC 59.081 40.000 16.52 8.30 0.00 2.59
780 801 4.362279 TGTTAAATCGTACGGCATAGACC 58.638 43.478 16.52 0.00 0.00 3.85
781 802 4.142204 TGTTAAATCGTACGGCATAGACCA 60.142 41.667 16.52 0.68 0.00 4.02
782 803 3.746045 AAATCGTACGGCATAGACCAT 57.254 42.857 16.52 0.00 0.00 3.55
783 804 4.859304 AAATCGTACGGCATAGACCATA 57.141 40.909 16.52 0.00 0.00 2.74
784 805 4.436242 AATCGTACGGCATAGACCATAG 57.564 45.455 16.52 0.00 0.00 2.23
785 806 2.156917 TCGTACGGCATAGACCATAGG 58.843 52.381 16.52 0.00 0.00 2.57
786 807 1.884579 CGTACGGCATAGACCATAGGT 59.115 52.381 7.57 0.00 39.44 3.08
787 808 2.295349 CGTACGGCATAGACCATAGGTT 59.705 50.000 7.57 0.00 35.25 3.50
788 809 3.611057 CGTACGGCATAGACCATAGGTTC 60.611 52.174 7.57 0.00 35.25 3.62
789 810 1.340248 ACGGCATAGACCATAGGTTCG 59.660 52.381 0.00 0.00 35.25 3.95
790 811 1.336887 CGGCATAGACCATAGGTTCGG 60.337 57.143 0.00 0.00 35.25 4.30
791 812 1.692519 GGCATAGACCATAGGTTCGGT 59.307 52.381 0.00 0.00 35.25 4.69
792 813 2.104281 GGCATAGACCATAGGTTCGGTT 59.896 50.000 0.00 0.00 35.25 4.44
793 814 3.131396 GCATAGACCATAGGTTCGGTTG 58.869 50.000 0.00 0.00 35.25 3.77
794 815 3.181469 GCATAGACCATAGGTTCGGTTGA 60.181 47.826 0.00 0.00 35.25 3.18
795 816 4.682320 GCATAGACCATAGGTTCGGTTGAA 60.682 45.833 0.00 0.00 35.25 2.69
804 825 3.332706 TTCGGTTGAACCATGGTCC 57.667 52.632 20.07 14.14 38.47 4.46
805 826 0.768622 TTCGGTTGAACCATGGTCCT 59.231 50.000 20.07 2.47 38.47 3.85
806 827 0.036164 TCGGTTGAACCATGGTCCTG 59.964 55.000 20.07 11.58 38.47 3.86
807 828 0.036164 CGGTTGAACCATGGTCCTGA 59.964 55.000 20.07 1.71 38.47 3.86
808 829 1.544537 CGGTTGAACCATGGTCCTGAA 60.545 52.381 20.07 0.20 38.47 3.02
809 830 2.807676 GGTTGAACCATGGTCCTGAAT 58.192 47.619 20.07 0.00 38.42 2.57
810 831 2.755103 GGTTGAACCATGGTCCTGAATC 59.245 50.000 20.07 11.54 38.42 2.52
811 832 3.420893 GTTGAACCATGGTCCTGAATCA 58.579 45.455 20.07 14.27 0.00 2.57
812 833 3.071874 TGAACCATGGTCCTGAATCAC 57.928 47.619 20.07 2.45 0.00 3.06
813 834 2.009774 GAACCATGGTCCTGAATCACG 58.990 52.381 20.07 0.00 0.00 4.35
814 835 0.984230 ACCATGGTCCTGAATCACGT 59.016 50.000 13.00 0.00 0.00 4.49
815 836 1.066143 ACCATGGTCCTGAATCACGTC 60.066 52.381 13.00 0.00 0.00 4.34
816 837 1.208052 CCATGGTCCTGAATCACGTCT 59.792 52.381 2.57 0.00 0.00 4.18
817 838 2.544685 CATGGTCCTGAATCACGTCTC 58.455 52.381 0.00 0.00 0.00 3.36
818 839 1.924731 TGGTCCTGAATCACGTCTCT 58.075 50.000 0.00 0.00 0.00 3.10
975 997 0.246086 CGCACTGCTTCTCCTTCTCT 59.754 55.000 0.00 0.00 0.00 3.10
1030 1052 4.430765 GCGACATCGACCCCACGT 62.431 66.667 5.26 0.00 43.02 4.49
1089 1111 0.532862 CCAGCCTCAACGACAACACT 60.533 55.000 0.00 0.00 0.00 3.55
1096 1118 2.033372 TCAACGACAACACTACCCTCA 58.967 47.619 0.00 0.00 0.00 3.86
1111 1133 0.695462 CCTCATGGAGATGGACCCCA 60.695 60.000 0.00 0.00 34.52 4.96
1180 1202 2.610859 GGGGCCTCTTCCACTCCA 60.611 66.667 0.84 0.00 0.00 3.86
1330 1352 1.144936 GGAAGCCAGGGTGAGATCG 59.855 63.158 0.00 0.00 0.00 3.69
1369 1391 2.879646 GTCAACCATTAAACCACCGACA 59.120 45.455 0.00 0.00 0.00 4.35
1519 1543 5.862924 AATTCCTTGTACACACGATGAAG 57.137 39.130 0.00 0.00 29.46 3.02
1542 1566 3.511146 ACTTTGAAATTGCCACATCCGAT 59.489 39.130 0.00 0.00 0.00 4.18
1559 1583 0.161658 GATGTGTCGTGCGTTGTCAG 59.838 55.000 0.00 0.00 0.00 3.51
1581 1605 3.005554 CTGGAGATTCATGTCACGCTTT 58.994 45.455 0.00 0.00 0.00 3.51
1583 1607 3.002791 GGAGATTCATGTCACGCTTTCA 58.997 45.455 0.00 0.00 0.00 2.69
1588 1612 4.630894 TTCATGTCACGCTTTCAAGTTT 57.369 36.364 0.00 0.00 0.00 2.66
1592 1616 4.167554 TGTCACGCTTTCAAGTTTTGTT 57.832 36.364 0.00 0.00 0.00 2.83
1596 1620 6.809196 TGTCACGCTTTCAAGTTTTGTTTATT 59.191 30.769 0.00 0.00 0.00 1.40
1598 1622 8.800031 GTCACGCTTTCAAGTTTTGTTTATTTA 58.200 29.630 0.00 0.00 0.00 1.40
1601 2831 9.361315 ACGCTTTCAAGTTTTGTTTATTTAAGT 57.639 25.926 0.00 0.00 0.00 2.24
1678 6677 7.958053 TTATCTCAGAGCATGTCATAATGTG 57.042 36.000 0.00 0.00 0.00 3.21
1684 6683 5.122711 CAGAGCATGTCATAATGTGTCACAA 59.877 40.000 10.28 0.00 0.00 3.33
1701 6700 9.656040 TGTGTCACAAGTACTAGTAAAAAGAAA 57.344 29.630 3.61 0.00 0.00 2.52
1724 6723 9.211556 GAAAGAGTTATAGTTAGCGAAAATTGC 57.788 33.333 0.00 0.00 0.00 3.56
1725 6724 8.494016 AAGAGTTATAGTTAGCGAAAATTGCT 57.506 30.769 0.00 0.00 46.29 3.91
1726 6725 8.494016 AGAGTTATAGTTAGCGAAAATTGCTT 57.506 30.769 0.00 0.00 43.71 3.91
1727 6726 8.947115 AGAGTTATAGTTAGCGAAAATTGCTTT 58.053 29.630 0.00 0.00 43.71 3.51
1728 6727 9.556030 GAGTTATAGTTAGCGAAAATTGCTTTT 57.444 29.630 0.00 0.00 43.71 2.27
1729 6728 9.341899 AGTTATAGTTAGCGAAAATTGCTTTTG 57.658 29.630 0.00 0.00 43.71 2.44
1730 6729 8.583765 GTTATAGTTAGCGAAAATTGCTTTTGG 58.416 33.333 0.00 0.00 43.71 3.28
1731 6730 5.195001 AGTTAGCGAAAATTGCTTTTGGA 57.805 34.783 0.00 0.00 43.71 3.53
1732 6731 5.222631 AGTTAGCGAAAATTGCTTTTGGAG 58.777 37.500 0.00 0.00 43.71 3.86
1741 6740 3.896479 CTTTTGGAGCTCGGCCTC 58.104 61.111 7.83 0.00 0.00 4.70
1747 6746 3.157252 GAGCTCGGCCTCCATGGA 61.157 66.667 15.27 15.27 38.35 3.41
1748 6747 3.160047 AGCTCGGCCTCCATGGAG 61.160 66.667 31.69 31.69 41.63 3.86
1756 6755 2.677228 CTCCATGGAGGCCGGTTT 59.323 61.111 31.14 0.00 38.51 3.27
1757 6756 1.000896 CTCCATGGAGGCCGGTTTT 60.001 57.895 31.14 0.00 38.51 2.43
1758 6757 0.611896 CTCCATGGAGGCCGGTTTTT 60.612 55.000 31.14 0.00 38.51 1.94
1759 6758 0.897863 TCCATGGAGGCCGGTTTTTG 60.898 55.000 11.44 0.00 37.29 2.44
1760 6759 0.897863 CCATGGAGGCCGGTTTTTGA 60.898 55.000 5.56 0.00 0.00 2.69
1761 6760 0.965439 CATGGAGGCCGGTTTTTGAA 59.035 50.000 1.90 0.00 0.00 2.69
1762 6761 1.342819 CATGGAGGCCGGTTTTTGAAA 59.657 47.619 1.90 0.00 0.00 2.69
1763 6762 1.486211 TGGAGGCCGGTTTTTGAAAA 58.514 45.000 1.90 0.00 0.00 2.29
1764 6763 1.831736 TGGAGGCCGGTTTTTGAAAAA 59.168 42.857 1.90 0.00 0.00 1.94
1765 6764 2.436173 TGGAGGCCGGTTTTTGAAAAAT 59.564 40.909 6.35 0.00 0.00 1.82
1766 6765 3.118223 TGGAGGCCGGTTTTTGAAAAATT 60.118 39.130 6.35 0.00 0.00 1.82
1767 6766 3.496884 GGAGGCCGGTTTTTGAAAAATTC 59.503 43.478 6.35 2.14 0.00 2.17
1768 6767 4.377021 GAGGCCGGTTTTTGAAAAATTCT 58.623 39.130 6.35 1.05 0.00 2.40
1769 6768 5.510009 GGAGGCCGGTTTTTGAAAAATTCTA 60.510 40.000 6.35 0.00 0.00 2.10
1770 6769 5.919755 AGGCCGGTTTTTGAAAAATTCTAA 58.080 33.333 6.35 0.00 0.00 2.10
1771 6770 6.350103 AGGCCGGTTTTTGAAAAATTCTAAA 58.650 32.000 6.35 0.00 33.69 1.85
1772 6771 6.995686 AGGCCGGTTTTTGAAAAATTCTAAAT 59.004 30.769 6.35 0.00 35.09 1.40
1773 6772 7.500892 AGGCCGGTTTTTGAAAAATTCTAAATT 59.499 29.630 6.35 0.00 35.09 1.82
1774 6773 7.801315 GGCCGGTTTTTGAAAAATTCTAAATTC 59.199 33.333 6.35 0.00 35.09 2.17
1775 6774 7.801315 GCCGGTTTTTGAAAAATTCTAAATTCC 59.199 33.333 6.35 0.00 35.09 3.01
1776 6775 8.831550 CCGGTTTTTGAAAAATTCTAAATTCCA 58.168 29.630 6.35 0.00 35.09 3.53
1838 6837 8.635765 AAAAATACGGACATATATGAAGGCAT 57.364 30.769 19.63 4.28 38.54 4.40
1839 6838 9.733556 AAAAATACGGACATATATGAAGGCATA 57.266 29.630 19.63 4.59 41.00 3.14
1840 6839 9.733556 AAAATACGGACATATATGAAGGCATAA 57.266 29.630 19.63 0.00 40.20 1.90
1841 6840 8.718102 AATACGGACATATATGAAGGCATAAC 57.282 34.615 19.63 0.08 40.20 1.89
1842 6841 6.109156 ACGGACATATATGAAGGCATAACA 57.891 37.500 19.63 0.00 40.20 2.41
1843 6842 5.932303 ACGGACATATATGAAGGCATAACAC 59.068 40.000 19.63 0.00 40.20 3.32
1844 6843 5.931724 CGGACATATATGAAGGCATAACACA 59.068 40.000 19.63 0.00 40.20 3.72
1845 6844 6.128553 CGGACATATATGAAGGCATAACACAC 60.129 42.308 19.63 0.00 40.20 3.82
1846 6845 6.710295 GGACATATATGAAGGCATAACACACA 59.290 38.462 19.63 0.00 40.20 3.72
1847 6846 7.391554 GGACATATATGAAGGCATAACACACAT 59.608 37.037 19.63 0.00 40.20 3.21
1848 6847 8.102800 ACATATATGAAGGCATAACACACATG 57.897 34.615 19.63 0.00 40.20 3.21
1849 6848 7.720957 ACATATATGAAGGCATAACACACATGT 59.279 33.333 19.63 0.00 40.20 3.21
1850 6849 4.707030 ATGAAGGCATAACACACATGTG 57.293 40.909 24.25 24.25 41.45 3.21
1851 6850 5.252547 TATGAAGGCATAACACACATGTGT 58.747 37.500 25.76 25.76 46.68 3.72
1866 6865 6.991485 CACATGTGTGTAAATTTTCAGGAC 57.009 37.500 18.03 0.00 40.96 3.85
1867 6866 6.502652 CACATGTGTGTAAATTTTCAGGACA 58.497 36.000 18.03 10.28 40.96 4.02
1868 6867 6.977502 CACATGTGTGTAAATTTTCAGGACAA 59.022 34.615 18.03 0.76 40.96 3.18
1869 6868 7.490725 CACATGTGTGTAAATTTTCAGGACAAA 59.509 33.333 18.03 0.00 40.96 2.83
1870 6869 8.037758 ACATGTGTGTAAATTTTCAGGACAAAA 58.962 29.630 0.00 0.00 36.63 2.44
1871 6870 9.044150 CATGTGTGTAAATTTTCAGGACAAAAT 57.956 29.630 11.35 0.00 37.53 1.82
1873 6872 9.522804 TGTGTGTAAATTTTCAGGACAAAATAC 57.477 29.630 0.00 0.00 35.35 1.89
1874 6873 8.687301 GTGTGTAAATTTTCAGGACAAAATACG 58.313 33.333 0.00 0.00 35.35 3.06
1875 6874 8.407064 TGTGTAAATTTTCAGGACAAAATACGT 58.593 29.630 0.00 0.00 35.35 3.57
1876 6875 9.240159 GTGTAAATTTTCAGGACAAAATACGTT 57.760 29.630 0.00 0.00 35.35 3.99
1877 6876 9.239002 TGTAAATTTTCAGGACAAAATACGTTG 57.761 29.630 0.00 0.00 35.35 4.10
1878 6877 9.453325 GTAAATTTTCAGGACAAAATACGTTGA 57.547 29.630 0.00 0.00 35.35 3.18
1879 6878 8.934507 AAATTTTCAGGACAAAATACGTTGAA 57.065 26.923 0.00 0.00 35.35 2.69
1880 6879 8.934507 AATTTTCAGGACAAAATACGTTGAAA 57.065 26.923 0.00 0.00 35.35 2.69
1881 6880 9.541143 AATTTTCAGGACAAAATACGTTGAAAT 57.459 25.926 0.00 0.00 35.35 2.17
1884 6883 9.672086 TTTCAGGACAAAATACGTTGAAATAAG 57.328 29.630 0.00 0.00 32.59 1.73
1885 6884 7.812648 TCAGGACAAAATACGTTGAAATAAGG 58.187 34.615 0.00 0.00 32.59 2.69
1886 6885 7.662258 TCAGGACAAAATACGTTGAAATAAGGA 59.338 33.333 0.00 0.00 32.59 3.36
1887 6886 7.749126 CAGGACAAAATACGTTGAAATAAGGAC 59.251 37.037 0.00 0.00 32.59 3.85
1888 6887 7.664318 AGGACAAAATACGTTGAAATAAGGACT 59.336 33.333 0.00 0.00 32.59 3.85
1889 6888 7.749126 GGACAAAATACGTTGAAATAAGGACTG 59.251 37.037 0.00 0.00 32.59 3.51
1890 6889 7.081976 ACAAAATACGTTGAAATAAGGACTGC 58.918 34.615 0.00 0.00 32.59 4.40
1891 6890 6.811253 AAATACGTTGAAATAAGGACTGCA 57.189 33.333 0.00 0.00 0.00 4.41
1892 6891 6.811253 AATACGTTGAAATAAGGACTGCAA 57.189 33.333 0.00 0.00 0.00 4.08
1893 6892 6.811253 ATACGTTGAAATAAGGACTGCAAA 57.189 33.333 0.00 0.00 0.00 3.68
1894 6893 5.508200 ACGTTGAAATAAGGACTGCAAAA 57.492 34.783 0.00 0.00 0.00 2.44
1895 6894 5.897050 ACGTTGAAATAAGGACTGCAAAAA 58.103 33.333 0.00 0.00 0.00 1.94
1896 6895 5.977129 ACGTTGAAATAAGGACTGCAAAAAG 59.023 36.000 0.00 0.00 0.00 2.27
1897 6896 5.402270 CGTTGAAATAAGGACTGCAAAAAGG 59.598 40.000 0.00 0.00 0.00 3.11
1898 6897 6.512297 GTTGAAATAAGGACTGCAAAAAGGA 58.488 36.000 0.00 0.00 0.00 3.36
1899 6898 6.084326 TGAAATAAGGACTGCAAAAAGGAC 57.916 37.500 0.00 0.00 0.00 3.85
1900 6899 5.596361 TGAAATAAGGACTGCAAAAAGGACA 59.404 36.000 0.00 0.00 0.00 4.02
1901 6900 6.097554 TGAAATAAGGACTGCAAAAAGGACAA 59.902 34.615 0.00 0.00 0.00 3.18
1902 6901 6.478512 AATAAGGACTGCAAAAAGGACAAA 57.521 33.333 0.00 0.00 0.00 2.83
1903 6902 4.817318 AAGGACTGCAAAAAGGACAAAA 57.183 36.364 0.00 0.00 0.00 2.44
1904 6903 4.123497 AGGACTGCAAAAAGGACAAAAC 57.877 40.909 0.00 0.00 0.00 2.43
1905 6904 3.769300 AGGACTGCAAAAAGGACAAAACT 59.231 39.130 0.00 0.00 0.00 2.66
1906 6905 4.953579 AGGACTGCAAAAAGGACAAAACTA 59.046 37.500 0.00 0.00 0.00 2.24
1907 6906 5.598417 AGGACTGCAAAAAGGACAAAACTAT 59.402 36.000 0.00 0.00 0.00 2.12
1908 6907 5.691754 GGACTGCAAAAAGGACAAAACTATG 59.308 40.000 0.00 0.00 0.00 2.23
1909 6908 5.600696 ACTGCAAAAAGGACAAAACTATGG 58.399 37.500 0.00 0.00 0.00 2.74
1910 6909 4.376146 TGCAAAAAGGACAAAACTATGGC 58.624 39.130 0.00 0.00 0.00 4.40
1919 6918 6.091718 GGACAAAACTATGGCCTTTTAACA 57.908 37.500 3.32 0.00 45.73 2.41
1920 6919 5.924254 GGACAAAACTATGGCCTTTTAACAC 59.076 40.000 3.32 0.00 45.73 3.32
1921 6920 6.461788 GGACAAAACTATGGCCTTTTAACACA 60.462 38.462 3.32 0.00 45.73 3.72
1922 6921 7.061566 ACAAAACTATGGCCTTTTAACACAT 57.938 32.000 3.32 0.00 0.00 3.21
1923 6922 6.928492 ACAAAACTATGGCCTTTTAACACATG 59.072 34.615 3.32 0.00 0.00 3.21
1924 6923 6.909550 AAACTATGGCCTTTTAACACATGA 57.090 33.333 3.32 0.00 0.00 3.07
1925 6924 7.480760 AAACTATGGCCTTTTAACACATGAT 57.519 32.000 3.32 0.00 0.00 2.45
1926 6925 8.588290 AAACTATGGCCTTTTAACACATGATA 57.412 30.769 3.32 0.00 0.00 2.15
1927 6926 7.568199 ACTATGGCCTTTTAACACATGATAC 57.432 36.000 3.32 0.00 0.00 2.24
1928 6927 7.346471 ACTATGGCCTTTTAACACATGATACT 58.654 34.615 3.32 0.00 0.00 2.12
1929 6928 8.491134 ACTATGGCCTTTTAACACATGATACTA 58.509 33.333 3.32 0.00 0.00 1.82
1930 6929 9.507329 CTATGGCCTTTTAACACATGATACTAT 57.493 33.333 3.32 0.00 0.00 2.12
1931 6930 8.766994 ATGGCCTTTTAACACATGATACTATT 57.233 30.769 3.32 0.00 0.00 1.73
1932 6931 8.220755 TGGCCTTTTAACACATGATACTATTC 57.779 34.615 3.32 0.00 0.00 1.75
1933 6932 7.831690 TGGCCTTTTAACACATGATACTATTCA 59.168 33.333 3.32 0.00 0.00 2.57
1934 6933 8.850156 GGCCTTTTAACACATGATACTATTCAT 58.150 33.333 0.00 0.00 36.79 2.57
1935 6934 9.884465 GCCTTTTAACACATGATACTATTCATC 57.116 33.333 0.00 0.00 34.09 2.92
1938 6937 9.913310 TTTTAACACATGATACTATTCATCCCA 57.087 29.630 0.00 0.00 34.09 4.37
1939 6938 9.913310 TTTAACACATGATACTATTCATCCCAA 57.087 29.630 0.00 0.00 34.09 4.12
1940 6939 9.913310 TTAACACATGATACTATTCATCCCAAA 57.087 29.630 0.00 0.00 34.09 3.28
1941 6940 8.821686 AACACATGATACTATTCATCCCAAAA 57.178 30.769 0.00 0.00 34.09 2.44
1942 6941 8.455903 ACACATGATACTATTCATCCCAAAAG 57.544 34.615 0.00 0.00 34.09 2.27
1943 6942 8.055181 ACACATGATACTATTCATCCCAAAAGT 58.945 33.333 0.00 0.00 34.09 2.66
1944 6943 8.562892 CACATGATACTATTCATCCCAAAAGTC 58.437 37.037 0.00 0.00 34.09 3.01
1945 6944 7.721399 ACATGATACTATTCATCCCAAAAGTCC 59.279 37.037 0.00 0.00 34.09 3.85
1946 6945 7.206789 TGATACTATTCATCCCAAAAGTCCA 57.793 36.000 0.00 0.00 0.00 4.02
1947 6946 7.815383 TGATACTATTCATCCCAAAAGTCCAT 58.185 34.615 0.00 0.00 0.00 3.41
1948 6947 7.720957 TGATACTATTCATCCCAAAAGTCCATG 59.279 37.037 0.00 0.00 0.00 3.66
1949 6948 6.078456 ACTATTCATCCCAAAAGTCCATGA 57.922 37.500 0.00 0.00 0.00 3.07
1950 6949 6.493166 ACTATTCATCCCAAAAGTCCATGAA 58.507 36.000 0.00 0.00 37.75 2.57
1951 6950 7.128077 ACTATTCATCCCAAAAGTCCATGAAT 58.872 34.615 9.68 9.68 43.42 2.57
1952 6951 6.879367 ATTCATCCCAAAAGTCCATGAATT 57.121 33.333 0.00 0.00 39.92 2.17
1953 6952 6.684897 TTCATCCCAAAAGTCCATGAATTT 57.315 33.333 0.00 0.00 31.06 1.82
1954 6953 6.040209 TCATCCCAAAAGTCCATGAATTTG 57.960 37.500 0.00 0.16 30.27 2.32
1955 6954 5.543405 TCATCCCAAAAGTCCATGAATTTGT 59.457 36.000 0.00 0.00 30.27 2.83
1956 6955 5.885449 TCCCAAAAGTCCATGAATTTGTT 57.115 34.783 0.00 0.00 30.27 2.83
1957 6956 5.852827 TCCCAAAAGTCCATGAATTTGTTC 58.147 37.500 0.00 0.00 30.27 3.18
1958 6957 5.602145 TCCCAAAAGTCCATGAATTTGTTCT 59.398 36.000 0.00 0.00 30.27 3.01
1959 6958 6.099557 TCCCAAAAGTCCATGAATTTGTTCTT 59.900 34.615 0.00 0.00 30.27 2.52
1960 6959 6.767423 CCCAAAAGTCCATGAATTTGTTCTTT 59.233 34.615 0.00 0.00 30.27 2.52
1961 6960 7.282901 CCCAAAAGTCCATGAATTTGTTCTTTT 59.717 33.333 0.00 0.00 35.30 2.27
1962 6961 8.676401 CCAAAAGTCCATGAATTTGTTCTTTTT 58.324 29.630 0.00 0.00 33.56 1.94
1963 6962 9.493206 CAAAAGTCCATGAATTTGTTCTTTTTG 57.507 29.630 0.00 0.00 33.56 2.44
1964 6963 6.849588 AGTCCATGAATTTGTTCTTTTTGC 57.150 33.333 0.00 0.00 0.00 3.68
1965 6964 6.347696 AGTCCATGAATTTGTTCTTTTTGCA 58.652 32.000 0.00 0.00 0.00 4.08
1966 6965 6.480981 AGTCCATGAATTTGTTCTTTTTGCAG 59.519 34.615 0.00 0.00 0.00 4.41
1967 6966 6.479660 GTCCATGAATTTGTTCTTTTTGCAGA 59.520 34.615 0.00 0.00 0.00 4.26
1968 6967 6.702723 TCCATGAATTTGTTCTTTTTGCAGAG 59.297 34.615 0.00 0.00 0.00 3.35
1969 6968 6.702723 CCATGAATTTGTTCTTTTTGCAGAGA 59.297 34.615 0.00 0.00 0.00 3.10
1970 6969 7.386848 CCATGAATTTGTTCTTTTTGCAGAGAT 59.613 33.333 0.00 0.00 0.00 2.75
1971 6970 7.935338 TGAATTTGTTCTTTTTGCAGAGATC 57.065 32.000 0.00 0.00 0.00 2.75
1972 6971 7.490840 TGAATTTGTTCTTTTTGCAGAGATCA 58.509 30.769 0.00 0.00 0.00 2.92
1973 6972 7.436080 TGAATTTGTTCTTTTTGCAGAGATCAC 59.564 33.333 0.00 0.00 0.00 3.06
1974 6973 5.833406 TTGTTCTTTTTGCAGAGATCACA 57.167 34.783 0.00 3.54 0.00 3.58
1975 6974 6.395426 TTGTTCTTTTTGCAGAGATCACAT 57.605 33.333 0.00 0.00 0.00 3.21
1976 6975 6.005583 TGTTCTTTTTGCAGAGATCACATC 57.994 37.500 0.00 0.00 0.00 3.06
1977 6976 5.766670 TGTTCTTTTTGCAGAGATCACATCT 59.233 36.000 0.00 0.00 43.70 2.90
1992 6991 7.222872 AGATCACATCTCAAGGTATTTCATCC 58.777 38.462 0.00 0.00 33.42 3.51
1993 6992 6.566079 TCACATCTCAAGGTATTTCATCCT 57.434 37.500 0.00 0.00 35.34 3.24
1994 6993 6.351711 TCACATCTCAAGGTATTTCATCCTG 58.648 40.000 0.00 0.00 33.97 3.86
1995 6994 6.156775 TCACATCTCAAGGTATTTCATCCTGA 59.843 38.462 0.00 0.00 33.97 3.86
1996 6995 6.825213 CACATCTCAAGGTATTTCATCCTGAA 59.175 38.462 0.00 0.00 34.03 3.02
2011 7010 9.906660 TTTCATCCTGAAATTTTACACACATAC 57.093 29.630 0.00 0.00 41.02 2.39
2012 7011 8.628630 TCATCCTGAAATTTTACACACATACA 57.371 30.769 0.00 0.00 0.00 2.29
2013 7012 8.511321 TCATCCTGAAATTTTACACACATACAC 58.489 33.333 0.00 0.00 0.00 2.90
2014 7013 7.809546 TCCTGAAATTTTACACACATACACA 57.190 32.000 0.00 0.00 0.00 3.72
2015 7014 8.402798 TCCTGAAATTTTACACACATACACAT 57.597 30.769 0.00 0.00 0.00 3.21
2016 7015 8.511321 TCCTGAAATTTTACACACATACACATC 58.489 33.333 0.00 0.00 0.00 3.06
2017 7016 8.296000 CCTGAAATTTTACACACATACACATCA 58.704 33.333 0.00 0.00 0.00 3.07
2018 7017 9.117145 CTGAAATTTTACACACATACACATCAC 57.883 33.333 0.00 0.00 0.00 3.06
2019 7018 8.624776 TGAAATTTTACACACATACACATCACA 58.375 29.630 0.00 0.00 0.00 3.58
2020 7019 9.624697 GAAATTTTACACACATACACATCACAT 57.375 29.630 0.00 0.00 0.00 3.21
2021 7020 9.624697 AAATTTTACACACATACACATCACATC 57.375 29.630 0.00 0.00 0.00 3.06
2022 7021 6.735678 TTTACACACATACACATCACATCC 57.264 37.500 0.00 0.00 0.00 3.51
2023 7022 4.558226 ACACACATACACATCACATCCT 57.442 40.909 0.00 0.00 0.00 3.24
2024 7023 4.910195 ACACACATACACATCACATCCTT 58.090 39.130 0.00 0.00 0.00 3.36
2025 7024 6.048732 ACACACATACACATCACATCCTTA 57.951 37.500 0.00 0.00 0.00 2.69
2026 7025 6.653020 ACACACATACACATCACATCCTTAT 58.347 36.000 0.00 0.00 0.00 1.73
2027 7026 7.791029 ACACACATACACATCACATCCTTATA 58.209 34.615 0.00 0.00 0.00 0.98
2028 7027 8.432013 ACACACATACACATCACATCCTTATAT 58.568 33.333 0.00 0.00 0.00 0.86
2029 7028 9.927668 CACACATACACATCACATCCTTATATA 57.072 33.333 0.00 0.00 0.00 0.86
2030 7029 9.929180 ACACATACACATCACATCCTTATATAC 57.071 33.333 0.00 0.00 0.00 1.47
2036 7035 9.982651 ACACATCACATCCTTATATACTTGTAC 57.017 33.333 0.00 0.00 0.00 2.90
2037 7036 9.981114 CACATCACATCCTTATATACTTGTACA 57.019 33.333 0.00 0.00 0.00 2.90
2108 7107 2.961424 AAAAACGGCCTCCATGGAG 58.039 52.632 31.69 31.69 41.63 3.86
2116 7115 3.004951 CTCCATGGAGGCCAAGCT 58.995 61.111 31.14 0.00 36.95 3.74
2117 7116 1.153005 CTCCATGGAGGCCAAGCTC 60.153 63.158 31.14 0.00 36.95 4.09
2118 7117 2.123982 CCATGGAGGCCAAGCTCC 60.124 66.667 5.56 3.06 36.95 4.70
2121 7120 3.260297 TGGAGGCCAAGCTCCAAA 58.740 55.556 8.96 0.00 45.68 3.28
2122 7121 1.541169 TGGAGGCCAAGCTCCAAAA 59.459 52.632 8.96 0.00 45.68 2.44
2123 7122 0.114954 TGGAGGCCAAGCTCCAAAAT 59.885 50.000 8.96 0.00 45.68 1.82
2124 7123 0.533951 GGAGGCCAAGCTCCAAAATG 59.466 55.000 5.01 0.00 39.45 2.32
2125 7124 0.108472 GAGGCCAAGCTCCAAAATGC 60.108 55.000 5.01 0.00 0.00 3.56
2126 7125 1.078918 GGCCAAGCTCCAAAATGCC 60.079 57.895 0.00 0.00 0.00 4.40
2127 7126 1.446618 GCCAAGCTCCAAAATGCCG 60.447 57.895 0.00 0.00 0.00 5.69
2128 7127 1.966762 CCAAGCTCCAAAATGCCGT 59.033 52.632 0.00 0.00 0.00 5.68
2129 7128 0.318120 CCAAGCTCCAAAATGCCGTT 59.682 50.000 0.00 0.00 0.00 4.44
2130 7129 1.669795 CCAAGCTCCAAAATGCCGTTC 60.670 52.381 0.00 0.00 0.00 3.95
2131 7130 1.270550 CAAGCTCCAAAATGCCGTTCT 59.729 47.619 0.00 0.00 0.00 3.01
2132 7131 1.168714 AGCTCCAAAATGCCGTTCTC 58.831 50.000 0.00 0.00 0.00 2.87
2133 7132 0.179189 GCTCCAAAATGCCGTTCTCG 60.179 55.000 0.00 0.00 0.00 4.04
2134 7133 0.179189 CTCCAAAATGCCGTTCTCGC 60.179 55.000 0.00 0.00 35.54 5.03
2147 8782 5.039333 GCCGTTCTCGCTAGACTATTTTAA 58.961 41.667 0.00 0.00 35.54 1.52
2189 8824 0.918258 TGGATAGCAGCCATCAACCA 59.082 50.000 3.07 0.00 0.00 3.67
2195 8830 1.285962 AGCAGCCATCAACCACCTTAT 59.714 47.619 0.00 0.00 0.00 1.73
2245 8880 4.888917 AGTCTCTTCTTGTTAGGAAGTGC 58.111 43.478 0.00 0.00 40.50 4.40
2249 8884 4.579869 TCTTCTTGTTAGGAAGTGCATCC 58.420 43.478 0.00 0.00 40.50 3.51
2259 8894 3.620488 GGAAGTGCATCCTTATGTTCCA 58.380 45.455 0.00 0.00 36.48 3.53
2268 8903 7.228507 GTGCATCCTTATGTTCCATTGTGTATA 59.771 37.037 0.00 0.00 35.38 1.47
2269 8904 7.777440 TGCATCCTTATGTTCCATTGTGTATAA 59.223 33.333 0.00 0.00 35.38 0.98
2270 8905 8.292448 GCATCCTTATGTTCCATTGTGTATAAG 58.708 37.037 0.00 0.00 35.38 1.73
2271 8906 9.342308 CATCCTTATGTTCCATTGTGTATAAGT 57.658 33.333 0.00 0.00 0.00 2.24
2272 8907 8.731275 TCCTTATGTTCCATTGTGTATAAGTG 57.269 34.615 0.00 0.00 0.00 3.16
2273 8908 8.544622 TCCTTATGTTCCATTGTGTATAAGTGA 58.455 33.333 0.00 0.00 0.00 3.41
2274 8909 9.173021 CCTTATGTTCCATTGTGTATAAGTGAA 57.827 33.333 0.00 0.00 0.00 3.18
2278 8913 7.653647 TGTTCCATTGTGTATAAGTGAAAACC 58.346 34.615 0.00 0.00 0.00 3.27
2281 8916 6.370442 TCCATTGTGTATAAGTGAAAACCGAG 59.630 38.462 0.00 0.00 0.00 4.63
2282 8917 6.148811 CCATTGTGTATAAGTGAAAACCGAGT 59.851 38.462 0.00 0.00 0.00 4.18
2283 8918 7.332430 CCATTGTGTATAAGTGAAAACCGAGTA 59.668 37.037 0.00 0.00 0.00 2.59
2284 8919 7.642071 TTGTGTATAAGTGAAAACCGAGTAC 57.358 36.000 0.00 0.00 0.00 2.73
2286 8921 6.642131 TGTGTATAAGTGAAAACCGAGTACAC 59.358 38.462 0.00 0.00 39.62 2.90
2287 8922 6.642131 GTGTATAAGTGAAAACCGAGTACACA 59.358 38.462 0.00 0.00 39.23 3.72
2288 8923 7.169645 GTGTATAAGTGAAAACCGAGTACACAA 59.830 37.037 0.00 0.00 39.23 3.33
2289 8924 6.780706 ATAAGTGAAAACCGAGTACACAAG 57.219 37.500 0.00 0.00 34.47 3.16
2290 8925 2.870411 AGTGAAAACCGAGTACACAAGC 59.130 45.455 0.00 0.00 34.47 4.01
2291 8926 2.610374 GTGAAAACCGAGTACACAAGCA 59.390 45.455 0.00 0.00 0.00 3.91
2292 8927 2.610374 TGAAAACCGAGTACACAAGCAC 59.390 45.455 0.00 0.00 0.00 4.40
2293 8928 2.319136 AAACCGAGTACACAAGCACA 57.681 45.000 0.00 0.00 0.00 4.57
2294 8929 1.865865 AACCGAGTACACAAGCACAG 58.134 50.000 0.00 0.00 0.00 3.66
2299 8934 2.726760 CGAGTACACAAGCACAGAGAAC 59.273 50.000 0.00 0.00 0.00 3.01
2309 8944 1.808133 GCACAGAGAACGATGGATCCC 60.808 57.143 9.90 0.00 0.00 3.85
2344 8979 6.798482 ACATTTTTCACACATATCGCATGAT 58.202 32.000 0.00 0.00 38.67 2.45
2351 8986 9.800433 TTTCACACATATCGCATGATTTTTATT 57.200 25.926 0.00 0.00 35.99 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
313 324 1.211969 CCTCTCGACGAAGCCGAAA 59.788 57.895 0.00 0.00 39.50 3.46
341 352 4.021925 GCAGGCCTTCTCCACCGT 62.022 66.667 0.00 0.00 0.00 4.83
419 430 6.640518 CAAAATGGCCTAGTACTCTACTCAA 58.359 40.000 3.32 0.00 40.14 3.02
451 468 1.177895 TGGCTTCCACACGTACCGTA 61.178 55.000 0.00 0.00 38.32 4.02
560 581 8.472007 ACCATGGTTCTGTAAAACATTTTAGA 57.528 30.769 13.00 0.00 33.66 2.10
585 606 0.242825 CGAGTGTAGGTTCGGCTGAA 59.757 55.000 3.13 3.13 33.39 3.02
586 607 0.607217 TCGAGTGTAGGTTCGGCTGA 60.607 55.000 0.00 0.00 37.42 4.26
587 608 0.456312 GTCGAGTGTAGGTTCGGCTG 60.456 60.000 0.00 0.00 38.33 4.85
588 609 0.892358 TGTCGAGTGTAGGTTCGGCT 60.892 55.000 0.21 0.00 41.65 5.52
589 610 0.731855 GTGTCGAGTGTAGGTTCGGC 60.732 60.000 0.00 0.00 41.49 5.54
590 611 0.109412 GGTGTCGAGTGTAGGTTCGG 60.109 60.000 0.00 0.00 37.42 4.30
591 612 0.594602 TGGTGTCGAGTGTAGGTTCG 59.405 55.000 0.00 0.00 38.13 3.95
592 613 2.993899 CAATGGTGTCGAGTGTAGGTTC 59.006 50.000 0.00 0.00 0.00 3.62
593 614 2.631062 TCAATGGTGTCGAGTGTAGGTT 59.369 45.455 0.00 0.00 0.00 3.50
594 615 2.244695 TCAATGGTGTCGAGTGTAGGT 58.755 47.619 0.00 0.00 0.00 3.08
595 616 3.526931 ATCAATGGTGTCGAGTGTAGG 57.473 47.619 0.00 0.00 0.00 3.18
596 617 5.171476 AGAAATCAATGGTGTCGAGTGTAG 58.829 41.667 0.00 0.00 0.00 2.74
597 618 5.147330 AGAAATCAATGGTGTCGAGTGTA 57.853 39.130 0.00 0.00 0.00 2.90
598 619 4.008074 AGAAATCAATGGTGTCGAGTGT 57.992 40.909 0.00 0.00 0.00 3.55
599 620 6.073276 TGTTTAGAAATCAATGGTGTCGAGTG 60.073 38.462 0.00 0.00 0.00 3.51
600 621 5.995282 TGTTTAGAAATCAATGGTGTCGAGT 59.005 36.000 0.00 0.00 0.00 4.18
601 622 6.147821 AGTGTTTAGAAATCAATGGTGTCGAG 59.852 38.462 0.00 0.00 0.00 4.04
602 623 5.995282 AGTGTTTAGAAATCAATGGTGTCGA 59.005 36.000 0.00 0.00 0.00 4.20
603 624 6.241207 AGTGTTTAGAAATCAATGGTGTCG 57.759 37.500 0.00 0.00 0.00 4.35
604 625 9.774742 GAATAGTGTTTAGAAATCAATGGTGTC 57.225 33.333 0.00 0.00 0.00 3.67
605 626 9.295825 TGAATAGTGTTTAGAAATCAATGGTGT 57.704 29.630 0.00 0.00 0.00 4.16
619 640 9.625747 TGCATGAATCCTTATGAATAGTGTTTA 57.374 29.630 0.00 0.00 0.00 2.01
620 641 8.523915 TGCATGAATCCTTATGAATAGTGTTT 57.476 30.769 0.00 0.00 0.00 2.83
621 642 8.573885 CATGCATGAATCCTTATGAATAGTGTT 58.426 33.333 22.59 0.00 0.00 3.32
622 643 7.176165 CCATGCATGAATCCTTATGAATAGTGT 59.824 37.037 28.31 0.00 0.00 3.55
623 644 7.176165 ACCATGCATGAATCCTTATGAATAGTG 59.824 37.037 28.31 6.79 0.00 2.74
624 645 7.236529 ACCATGCATGAATCCTTATGAATAGT 58.763 34.615 28.31 8.16 0.00 2.12
625 646 7.413767 CGACCATGCATGAATCCTTATGAATAG 60.414 40.741 28.31 7.52 0.00 1.73
626 647 6.372381 CGACCATGCATGAATCCTTATGAATA 59.628 38.462 28.31 0.00 0.00 1.75
627 648 5.182570 CGACCATGCATGAATCCTTATGAAT 59.817 40.000 28.31 0.00 0.00 2.57
628 649 4.516321 CGACCATGCATGAATCCTTATGAA 59.484 41.667 28.31 0.00 0.00 2.57
629 650 4.067192 CGACCATGCATGAATCCTTATGA 58.933 43.478 28.31 0.00 0.00 2.15
630 651 4.067192 TCGACCATGCATGAATCCTTATG 58.933 43.478 28.31 10.05 0.00 1.90
631 652 4.356405 TCGACCATGCATGAATCCTTAT 57.644 40.909 28.31 2.63 0.00 1.73
632 653 3.836365 TCGACCATGCATGAATCCTTA 57.164 42.857 28.31 9.14 0.00 2.69
633 654 2.715749 TCGACCATGCATGAATCCTT 57.284 45.000 28.31 4.55 0.00 3.36
634 655 2.945080 ATCGACCATGCATGAATCCT 57.055 45.000 28.31 10.66 0.00 3.24
635 656 5.437289 TTTAATCGACCATGCATGAATCC 57.563 39.130 28.31 11.99 0.00 3.01
666 687 9.649167 CTCATGAATAGACATGCATATCAACTA 57.351 33.333 7.88 4.23 44.79 2.24
667 688 7.606839 CCTCATGAATAGACATGCATATCAACT 59.393 37.037 7.88 2.17 44.79 3.16
668 689 7.605309 TCCTCATGAATAGACATGCATATCAAC 59.395 37.037 7.88 0.00 44.79 3.18
669 690 7.682628 TCCTCATGAATAGACATGCATATCAA 58.317 34.615 7.88 0.00 44.79 2.57
670 691 7.248743 TCCTCATGAATAGACATGCATATCA 57.751 36.000 7.88 2.79 44.79 2.15
671 692 7.441760 GGATCCTCATGAATAGACATGCATATC 59.558 40.741 3.84 0.00 44.79 1.63
672 693 7.092578 TGGATCCTCATGAATAGACATGCATAT 60.093 37.037 14.23 0.00 44.79 1.78
673 694 6.214005 TGGATCCTCATGAATAGACATGCATA 59.786 38.462 14.23 0.00 44.79 3.14
674 695 5.013808 TGGATCCTCATGAATAGACATGCAT 59.986 40.000 14.23 0.00 44.79 3.96
675 696 4.348754 TGGATCCTCATGAATAGACATGCA 59.651 41.667 14.23 0.00 44.79 3.96
676 697 4.903054 TGGATCCTCATGAATAGACATGC 58.097 43.478 14.23 0.00 44.79 4.06
677 698 5.354513 GCATGGATCCTCATGAATAGACATG 59.645 44.000 14.23 17.94 45.30 3.21
678 699 5.013808 TGCATGGATCCTCATGAATAGACAT 59.986 40.000 14.23 0.00 45.30 3.06
679 700 4.348754 TGCATGGATCCTCATGAATAGACA 59.651 41.667 14.23 0.00 45.30 3.41
680 701 4.903054 TGCATGGATCCTCATGAATAGAC 58.097 43.478 14.23 0.00 45.30 2.59
681 702 5.497474 CATGCATGGATCCTCATGAATAGA 58.503 41.667 24.98 0.00 45.30 1.98
682 703 5.819825 CATGCATGGATCCTCATGAATAG 57.180 43.478 24.98 10.24 45.30 1.73
697 718 5.813157 TGCATTTCTTAATCAACCATGCATG 59.187 36.000 20.19 20.19 40.37 4.06
698 719 5.813672 GTGCATTTCTTAATCAACCATGCAT 59.186 36.000 7.15 0.00 45.26 3.96
699 720 5.047164 AGTGCATTTCTTAATCAACCATGCA 60.047 36.000 0.00 0.00 42.39 3.96
700 721 5.413499 AGTGCATTTCTTAATCAACCATGC 58.587 37.500 0.00 0.00 36.82 4.06
701 722 6.311935 CCAAGTGCATTTCTTAATCAACCATG 59.688 38.462 0.00 0.00 0.00 3.66
702 723 6.400568 CCAAGTGCATTTCTTAATCAACCAT 58.599 36.000 0.00 0.00 0.00 3.55
703 724 5.782047 CCAAGTGCATTTCTTAATCAACCA 58.218 37.500 0.00 0.00 0.00 3.67
704 725 4.627035 GCCAAGTGCATTTCTTAATCAACC 59.373 41.667 0.00 0.00 40.77 3.77
705 726 5.768333 GCCAAGTGCATTTCTTAATCAAC 57.232 39.130 0.00 0.00 40.77 3.18
719 740 0.734942 GTGACATGCATGCCAAGTGC 60.735 55.000 26.53 6.09 42.81 4.40
720 741 0.599060 TGTGACATGCATGCCAAGTG 59.401 50.000 26.53 11.21 0.00 3.16
721 742 1.552578 ATGTGACATGCATGCCAAGT 58.447 45.000 26.53 10.79 0.00 3.16
722 743 3.305131 GGATATGTGACATGCATGCCAAG 60.305 47.826 26.53 7.42 0.00 3.61
723 744 2.624364 GGATATGTGACATGCATGCCAA 59.376 45.455 26.53 12.61 0.00 4.52
724 745 2.232399 GGATATGTGACATGCATGCCA 58.768 47.619 26.53 19.63 0.00 4.92
725 746 2.030540 GTGGATATGTGACATGCATGCC 60.031 50.000 26.53 16.86 0.00 4.40
726 747 2.619646 TGTGGATATGTGACATGCATGC 59.380 45.455 26.53 18.59 0.00 4.06
727 748 4.794169 CATGTGGATATGTGACATGCATG 58.206 43.478 25.09 25.09 40.27 4.06
732 753 8.250143 TCTTACTACATGTGGATATGTGACAT 57.750 34.615 16.98 2.65 41.18 3.06
733 754 7.654022 TCTTACTACATGTGGATATGTGACA 57.346 36.000 16.98 0.00 41.18 3.58
734 755 8.144478 ACATCTTACTACATGTGGATATGTGAC 58.856 37.037 16.98 0.00 41.18 3.67
735 756 8.250143 ACATCTTACTACATGTGGATATGTGA 57.750 34.615 16.98 5.58 41.18 3.58
736 757 8.893219 AACATCTTACTACATGTGGATATGTG 57.107 34.615 16.98 10.78 41.18 3.21
741 762 9.261180 CGATTTAACATCTTACTACATGTGGAT 57.739 33.333 16.98 3.03 33.38 3.41
742 763 8.255206 ACGATTTAACATCTTACTACATGTGGA 58.745 33.333 16.98 3.30 33.38 4.02
743 764 8.420374 ACGATTTAACATCTTACTACATGTGG 57.580 34.615 9.11 8.41 33.38 4.17
745 766 9.229784 CGTACGATTTAACATCTTACTACATGT 57.770 33.333 10.44 2.69 34.58 3.21
746 767 8.688184 CCGTACGATTTAACATCTTACTACATG 58.312 37.037 18.76 0.00 0.00 3.21
747 768 7.380602 GCCGTACGATTTAACATCTTACTACAT 59.619 37.037 18.76 0.00 0.00 2.29
748 769 6.692681 GCCGTACGATTTAACATCTTACTACA 59.307 38.462 18.76 0.00 0.00 2.74
749 770 6.692681 TGCCGTACGATTTAACATCTTACTAC 59.307 38.462 18.76 5.54 0.00 2.73
750 771 6.794374 TGCCGTACGATTTAACATCTTACTA 58.206 36.000 18.76 0.00 0.00 1.82
751 772 5.653507 TGCCGTACGATTTAACATCTTACT 58.346 37.500 18.76 0.00 0.00 2.24
752 773 5.954434 TGCCGTACGATTTAACATCTTAC 57.046 39.130 18.76 0.00 0.00 2.34
753 774 7.592533 GTCTATGCCGTACGATTTAACATCTTA 59.407 37.037 18.76 0.00 0.00 2.10
754 775 6.420008 GTCTATGCCGTACGATTTAACATCTT 59.580 38.462 18.76 0.00 0.00 2.40
755 776 5.919141 GTCTATGCCGTACGATTTAACATCT 59.081 40.000 18.76 0.00 0.00 2.90
756 777 5.118203 GGTCTATGCCGTACGATTTAACATC 59.882 44.000 18.76 0.00 0.00 3.06
757 778 4.986659 GGTCTATGCCGTACGATTTAACAT 59.013 41.667 18.76 11.95 0.00 2.71
758 779 4.142204 TGGTCTATGCCGTACGATTTAACA 60.142 41.667 18.76 5.25 0.00 2.41
759 780 4.362279 TGGTCTATGCCGTACGATTTAAC 58.638 43.478 18.76 7.41 0.00 2.01
760 781 4.652421 TGGTCTATGCCGTACGATTTAA 57.348 40.909 18.76 0.00 0.00 1.52
761 782 4.859304 ATGGTCTATGCCGTACGATTTA 57.141 40.909 18.76 3.95 0.00 1.40
762 783 3.746045 ATGGTCTATGCCGTACGATTT 57.254 42.857 18.76 2.85 0.00 2.17
763 784 3.192844 CCTATGGTCTATGCCGTACGATT 59.807 47.826 18.76 3.24 0.00 3.34
764 785 2.753452 CCTATGGTCTATGCCGTACGAT 59.247 50.000 18.76 5.70 0.00 3.73
765 786 2.156917 CCTATGGTCTATGCCGTACGA 58.843 52.381 18.76 0.00 0.00 3.43
766 787 1.884579 ACCTATGGTCTATGCCGTACG 59.115 52.381 8.69 8.69 0.00 3.67
767 788 3.611057 CGAACCTATGGTCTATGCCGTAC 60.611 52.174 0.00 0.00 33.12 3.67
768 789 2.555325 CGAACCTATGGTCTATGCCGTA 59.445 50.000 0.00 0.00 33.12 4.02
769 790 1.340248 CGAACCTATGGTCTATGCCGT 59.660 52.381 0.00 0.00 33.12 5.68
770 791 1.336887 CCGAACCTATGGTCTATGCCG 60.337 57.143 0.00 0.00 33.12 5.69
771 792 1.692519 ACCGAACCTATGGTCTATGCC 59.307 52.381 0.00 0.00 33.12 4.40
772 793 3.131396 CAACCGAACCTATGGTCTATGC 58.869 50.000 0.00 0.00 37.54 3.14
773 794 4.665833 TCAACCGAACCTATGGTCTATG 57.334 45.455 0.00 0.00 37.54 2.23
774 795 5.019785 GTTCAACCGAACCTATGGTCTAT 57.980 43.478 0.00 0.00 44.92 1.98
775 796 4.460948 GTTCAACCGAACCTATGGTCTA 57.539 45.455 0.00 0.00 44.92 2.59
776 797 3.329929 GTTCAACCGAACCTATGGTCT 57.670 47.619 0.00 0.00 44.92 3.85
786 807 0.768622 AGGACCATGGTTCAACCGAA 59.231 50.000 25.54 0.00 42.58 4.30
787 808 0.036164 CAGGACCATGGTTCAACCGA 59.964 55.000 25.54 0.00 42.58 4.69
788 809 0.036164 TCAGGACCATGGTTCAACCG 59.964 55.000 25.54 14.03 42.58 4.44
789 810 2.286365 TTCAGGACCATGGTTCAACC 57.714 50.000 25.54 18.22 39.22 3.77
790 811 3.191371 GTGATTCAGGACCATGGTTCAAC 59.809 47.826 25.54 13.00 0.00 3.18
791 812 3.420893 GTGATTCAGGACCATGGTTCAA 58.579 45.455 25.54 12.05 0.00 2.69
792 813 2.615240 CGTGATTCAGGACCATGGTTCA 60.615 50.000 25.54 17.34 0.00 3.18
793 814 2.009774 CGTGATTCAGGACCATGGTTC 58.990 52.381 20.85 18.49 0.00 3.62
794 815 1.351017 ACGTGATTCAGGACCATGGTT 59.649 47.619 20.85 0.38 0.00 3.67
795 816 0.984230 ACGTGATTCAGGACCATGGT 59.016 50.000 19.89 19.89 0.00 3.55
796 817 1.208052 AGACGTGATTCAGGACCATGG 59.792 52.381 11.19 11.19 0.00 3.66
797 818 2.167281 AGAGACGTGATTCAGGACCATG 59.833 50.000 13.00 0.00 0.00 3.66
798 819 2.428890 GAGAGACGTGATTCAGGACCAT 59.571 50.000 13.00 0.00 0.00 3.55
799 820 1.819288 GAGAGACGTGATTCAGGACCA 59.181 52.381 13.00 0.00 0.00 4.02
800 821 1.202200 CGAGAGACGTGATTCAGGACC 60.202 57.143 13.00 4.78 37.22 4.46
801 822 2.181426 CGAGAGACGTGATTCAGGAC 57.819 55.000 13.00 7.00 37.22 3.85
813 834 2.737252 GTTGGAAATGGACACGAGAGAC 59.263 50.000 0.00 0.00 0.00 3.36
814 835 2.609491 CGTTGGAAATGGACACGAGAGA 60.609 50.000 0.00 0.00 0.00 3.10
815 836 1.726791 CGTTGGAAATGGACACGAGAG 59.273 52.381 0.00 0.00 0.00 3.20
816 837 1.341852 TCGTTGGAAATGGACACGAGA 59.658 47.619 0.00 0.00 32.44 4.04
817 838 1.726791 CTCGTTGGAAATGGACACGAG 59.273 52.381 5.70 5.70 39.32 4.18
818 839 1.341852 TCTCGTTGGAAATGGACACGA 59.658 47.619 0.00 0.00 32.44 4.35
975 997 1.000506 GTGAAGTTGTAGAGCCGGTCA 59.999 52.381 1.90 0.00 0.00 4.02
1030 1052 0.541392 ATCATGTACTGCGGCTCCAA 59.459 50.000 0.00 0.00 0.00 3.53
1089 1111 1.414538 GGGTCCATCTCCATGAGGGTA 60.415 57.143 0.00 0.00 46.03 3.69
1096 1118 1.308128 TGCTGGGGTCCATCTCCAT 60.308 57.895 0.00 0.00 46.85 3.41
1111 1133 0.681733 TCGAAGGTCTTGAAGCTGCT 59.318 50.000 0.00 0.00 35.40 4.24
1213 1235 3.075005 ATGGCGCTGGACGTAGGT 61.075 61.111 7.64 0.00 46.11 3.08
1330 1352 2.328099 CCACGCTGCACTTCTTCCC 61.328 63.158 0.00 0.00 0.00 3.97
1369 1391 6.534793 CACAAATCAAAACAGCCTTGTACTTT 59.465 34.615 0.00 0.00 36.23 2.66
1423 1447 7.066142 AGAGAGAAAGGAGCTATGACAATCTA 58.934 38.462 0.00 0.00 0.00 1.98
1483 1507 9.693739 TGTACAAGGAATTAACATGGTCATAAT 57.306 29.630 0.00 0.00 0.00 1.28
1487 1511 6.205853 GTGTGTACAAGGAATTAACATGGTCA 59.794 38.462 0.00 0.00 0.00 4.02
1519 1543 3.057596 TCGGATGTGGCAATTTCAAAGTC 60.058 43.478 0.00 0.00 0.00 3.01
1542 1566 2.521771 GCTGACAACGCACGACACA 61.522 57.895 0.00 0.00 0.00 3.72
1559 1583 0.654683 GCGTGACATGAATCTCCAGC 59.345 55.000 0.00 0.00 0.00 4.85
1668 6667 9.850628 TTACTAGTACTTGTGACACATTATGAC 57.149 33.333 18.57 4.10 0.00 3.06
1701 6700 8.494016 AAGCAATTTTCGCTAACTATAACTCT 57.506 30.769 0.00 0.00 39.29 3.24
1724 6723 1.746991 GGAGGCCGAGCTCCAAAAG 60.747 63.158 8.47 0.00 39.45 2.27
1725 6724 2.351276 GGAGGCCGAGCTCCAAAA 59.649 61.111 8.47 0.00 39.45 2.44
1726 6725 2.927856 TGGAGGCCGAGCTCCAAA 60.928 61.111 8.96 0.00 45.68 3.28
1729 6728 4.247380 CCATGGAGGCCGAGCTCC 62.247 72.222 5.56 0.00 40.05 4.70
1730 6729 3.157252 TCCATGGAGGCCGAGCTC 61.157 66.667 11.44 2.73 37.29 4.09
1731 6730 3.160047 CTCCATGGAGGCCGAGCT 61.160 66.667 31.14 0.00 38.51 4.09
1739 6738 0.611896 AAAAACCGGCCTCCATGGAG 60.612 55.000 31.69 31.69 41.63 3.86
1740 6739 0.897863 CAAAAACCGGCCTCCATGGA 60.898 55.000 15.27 15.27 38.35 3.41
1741 6740 0.897863 TCAAAAACCGGCCTCCATGG 60.898 55.000 4.97 4.97 39.35 3.66
1742 6741 0.965439 TTCAAAAACCGGCCTCCATG 59.035 50.000 0.00 0.00 0.00 3.66
1743 6742 1.710816 TTTCAAAAACCGGCCTCCAT 58.289 45.000 0.00 0.00 0.00 3.41
1744 6743 1.486211 TTTTCAAAAACCGGCCTCCA 58.514 45.000 0.00 0.00 0.00 3.86
1745 6744 2.605837 TTTTTCAAAAACCGGCCTCC 57.394 45.000 0.00 0.00 0.00 4.30
1746 6745 4.377021 AGAATTTTTCAAAAACCGGCCTC 58.623 39.130 0.00 0.00 0.00 4.70
1747 6746 4.415881 AGAATTTTTCAAAAACCGGCCT 57.584 36.364 0.00 0.00 0.00 5.19
1748 6747 6.606234 TTTAGAATTTTTCAAAAACCGGCC 57.394 33.333 0.00 0.00 0.00 6.13
1749 6748 7.801315 GGAATTTAGAATTTTTCAAAAACCGGC 59.199 33.333 0.00 0.00 0.00 6.13
1750 6749 8.831550 TGGAATTTAGAATTTTTCAAAAACCGG 58.168 29.630 0.00 0.00 0.00 5.28
1813 6812 8.635765 ATGCCTTCATATATGTCCGTATTTTT 57.364 30.769 12.42 0.00 0.00 1.94
1814 6813 9.733556 TTATGCCTTCATATATGTCCGTATTTT 57.266 29.630 12.42 0.00 35.30 1.82
1815 6814 9.162764 GTTATGCCTTCATATATGTCCGTATTT 57.837 33.333 12.42 0.00 35.30 1.40
1816 6815 8.318412 TGTTATGCCTTCATATATGTCCGTATT 58.682 33.333 12.42 0.00 35.30 1.89
1817 6816 7.764443 GTGTTATGCCTTCATATATGTCCGTAT 59.236 37.037 12.42 8.09 35.30 3.06
1818 6817 7.094631 GTGTTATGCCTTCATATATGTCCGTA 58.905 38.462 12.42 1.62 35.30 4.02
1819 6818 5.932303 GTGTTATGCCTTCATATATGTCCGT 59.068 40.000 12.42 4.27 35.30 4.69
1820 6819 5.931724 TGTGTTATGCCTTCATATATGTCCG 59.068 40.000 12.42 2.62 35.30 4.79
1821 6820 6.710295 TGTGTGTTATGCCTTCATATATGTCC 59.290 38.462 12.42 1.22 35.30 4.02
1822 6821 7.728847 TGTGTGTTATGCCTTCATATATGTC 57.271 36.000 12.42 2.25 35.30 3.06
1823 6822 7.720957 ACATGTGTGTTATGCCTTCATATATGT 59.279 33.333 12.42 0.00 34.01 2.29
1824 6823 8.019094 CACATGTGTGTTATGCCTTCATATATG 58.981 37.037 18.03 6.36 40.96 1.78
1825 6824 8.102800 CACATGTGTGTTATGCCTTCATATAT 57.897 34.615 18.03 0.00 40.96 0.86
1826 6825 7.495135 CACATGTGTGTTATGCCTTCATATA 57.505 36.000 18.03 0.00 40.96 0.86
1827 6826 6.381481 CACATGTGTGTTATGCCTTCATAT 57.619 37.500 18.03 0.00 40.96 1.78
1828 6827 5.816449 CACATGTGTGTTATGCCTTCATA 57.184 39.130 18.03 0.00 40.96 2.15
1829 6828 4.707030 CACATGTGTGTTATGCCTTCAT 57.293 40.909 18.03 0.00 40.96 2.57
1844 6843 6.707440 TGTCCTGAAAATTTACACACATGT 57.293 33.333 0.00 0.00 43.30 3.21
1845 6844 8.417780 TTTTGTCCTGAAAATTTACACACATG 57.582 30.769 0.00 0.00 0.00 3.21
1847 6846 9.522804 GTATTTTGTCCTGAAAATTTACACACA 57.477 29.630 0.00 0.00 36.94 3.72
1848 6847 8.687301 CGTATTTTGTCCTGAAAATTTACACAC 58.313 33.333 0.00 0.00 36.94 3.82
1849 6848 8.407064 ACGTATTTTGTCCTGAAAATTTACACA 58.593 29.630 0.00 0.00 36.94 3.72
1850 6849 8.791355 ACGTATTTTGTCCTGAAAATTTACAC 57.209 30.769 0.00 0.00 36.94 2.90
1851 6850 9.239002 CAACGTATTTTGTCCTGAAAATTTACA 57.761 29.630 0.00 0.00 36.94 2.41
1852 6851 9.453325 TCAACGTATTTTGTCCTGAAAATTTAC 57.547 29.630 0.00 0.00 36.94 2.01
1854 6853 8.934507 TTCAACGTATTTTGTCCTGAAAATTT 57.065 26.923 0.00 0.00 36.94 1.82
1855 6854 8.934507 TTTCAACGTATTTTGTCCTGAAAATT 57.065 26.923 4.30 0.00 36.94 1.82
1858 6857 9.672086 CTTATTTCAACGTATTTTGTCCTGAAA 57.328 29.630 8.26 8.26 36.19 2.69
1859 6858 8.293867 CCTTATTTCAACGTATTTTGTCCTGAA 58.706 33.333 0.00 0.00 0.00 3.02
1860 6859 7.662258 TCCTTATTTCAACGTATTTTGTCCTGA 59.338 33.333 0.00 0.00 0.00 3.86
1861 6860 7.749126 GTCCTTATTTCAACGTATTTTGTCCTG 59.251 37.037 0.00 0.00 0.00 3.86
1862 6861 7.664318 AGTCCTTATTTCAACGTATTTTGTCCT 59.336 33.333 0.00 0.00 0.00 3.85
1863 6862 7.749126 CAGTCCTTATTTCAACGTATTTTGTCC 59.251 37.037 0.00 0.00 0.00 4.02
1864 6863 7.270579 GCAGTCCTTATTTCAACGTATTTTGTC 59.729 37.037 0.00 0.00 0.00 3.18
1865 6864 7.081976 GCAGTCCTTATTTCAACGTATTTTGT 58.918 34.615 0.00 0.00 0.00 2.83
1866 6865 7.081349 TGCAGTCCTTATTTCAACGTATTTTG 58.919 34.615 0.00 0.00 0.00 2.44
1867 6866 7.209471 TGCAGTCCTTATTTCAACGTATTTT 57.791 32.000 0.00 0.00 0.00 1.82
1868 6867 6.811253 TGCAGTCCTTATTTCAACGTATTT 57.189 33.333 0.00 0.00 0.00 1.40
1869 6868 6.811253 TTGCAGTCCTTATTTCAACGTATT 57.189 33.333 0.00 0.00 0.00 1.89
1870 6869 6.811253 TTTGCAGTCCTTATTTCAACGTAT 57.189 33.333 0.00 0.00 0.00 3.06
1871 6870 6.621316 TTTTGCAGTCCTTATTTCAACGTA 57.379 33.333 0.00 0.00 0.00 3.57
1872 6871 5.508200 TTTTGCAGTCCTTATTTCAACGT 57.492 34.783 0.00 0.00 0.00 3.99
1873 6872 5.402270 CCTTTTTGCAGTCCTTATTTCAACG 59.598 40.000 0.00 0.00 0.00 4.10
1874 6873 6.420903 GTCCTTTTTGCAGTCCTTATTTCAAC 59.579 38.462 0.00 0.00 0.00 3.18
1875 6874 6.097554 TGTCCTTTTTGCAGTCCTTATTTCAA 59.902 34.615 0.00 0.00 0.00 2.69
1876 6875 5.596361 TGTCCTTTTTGCAGTCCTTATTTCA 59.404 36.000 0.00 0.00 0.00 2.69
1877 6876 6.084326 TGTCCTTTTTGCAGTCCTTATTTC 57.916 37.500 0.00 0.00 0.00 2.17
1878 6877 6.478512 TTGTCCTTTTTGCAGTCCTTATTT 57.521 33.333 0.00 0.00 0.00 1.40
1879 6878 6.478512 TTTGTCCTTTTTGCAGTCCTTATT 57.521 33.333 0.00 0.00 0.00 1.40
1880 6879 6.098266 AGTTTTGTCCTTTTTGCAGTCCTTAT 59.902 34.615 0.00 0.00 0.00 1.73
1881 6880 5.420739 AGTTTTGTCCTTTTTGCAGTCCTTA 59.579 36.000 0.00 0.00 0.00 2.69
1882 6881 4.222810 AGTTTTGTCCTTTTTGCAGTCCTT 59.777 37.500 0.00 0.00 0.00 3.36
1883 6882 3.769300 AGTTTTGTCCTTTTTGCAGTCCT 59.231 39.130 0.00 0.00 0.00 3.85
1884 6883 4.123497 AGTTTTGTCCTTTTTGCAGTCC 57.877 40.909 0.00 0.00 0.00 3.85
1885 6884 5.691754 CCATAGTTTTGTCCTTTTTGCAGTC 59.308 40.000 0.00 0.00 0.00 3.51
1886 6885 5.600696 CCATAGTTTTGTCCTTTTTGCAGT 58.399 37.500 0.00 0.00 0.00 4.40
1887 6886 4.448732 GCCATAGTTTTGTCCTTTTTGCAG 59.551 41.667 0.00 0.00 0.00 4.41
1888 6887 4.376146 GCCATAGTTTTGTCCTTTTTGCA 58.624 39.130 0.00 0.00 0.00 4.08
1889 6888 3.745975 GGCCATAGTTTTGTCCTTTTTGC 59.254 43.478 0.00 0.00 0.00 3.68
1890 6889 5.213891 AGGCCATAGTTTTGTCCTTTTTG 57.786 39.130 5.01 0.00 0.00 2.44
1891 6890 5.887214 AAGGCCATAGTTTTGTCCTTTTT 57.113 34.783 5.01 0.00 30.40 1.94
1892 6891 5.887214 AAAGGCCATAGTTTTGTCCTTTT 57.113 34.783 5.01 0.00 39.97 2.27
1893 6892 5.887214 AAAAGGCCATAGTTTTGTCCTTT 57.113 34.783 5.01 0.00 43.42 3.11
1894 6893 6.325286 TGTTAAAAGGCCATAGTTTTGTCCTT 59.675 34.615 5.01 0.00 35.63 3.36
1895 6894 5.836358 TGTTAAAAGGCCATAGTTTTGTCCT 59.164 36.000 5.01 0.00 0.00 3.85
1896 6895 5.924254 GTGTTAAAAGGCCATAGTTTTGTCC 59.076 40.000 5.01 0.00 0.00 4.02
1897 6896 6.508777 TGTGTTAAAAGGCCATAGTTTTGTC 58.491 36.000 5.01 1.95 0.00 3.18
1898 6897 6.472686 TGTGTTAAAAGGCCATAGTTTTGT 57.527 33.333 5.01 0.00 0.00 2.83
1899 6898 7.151308 TCATGTGTTAAAAGGCCATAGTTTTG 58.849 34.615 5.01 0.00 0.00 2.44
1900 6899 7.296628 TCATGTGTTAAAAGGCCATAGTTTT 57.703 32.000 5.01 5.52 0.00 2.43
1901 6900 6.909550 TCATGTGTTAAAAGGCCATAGTTT 57.090 33.333 5.01 2.02 0.00 2.66
1902 6901 7.834181 AGTATCATGTGTTAAAAGGCCATAGTT 59.166 33.333 5.01 0.00 0.00 2.24
1903 6902 7.346471 AGTATCATGTGTTAAAAGGCCATAGT 58.654 34.615 5.01 0.00 0.00 2.12
1904 6903 7.807977 AGTATCATGTGTTAAAAGGCCATAG 57.192 36.000 5.01 0.00 0.00 2.23
1905 6904 9.860650 AATAGTATCATGTGTTAAAAGGCCATA 57.139 29.630 5.01 0.00 0.00 2.74
1906 6905 8.766994 AATAGTATCATGTGTTAAAAGGCCAT 57.233 30.769 5.01 0.00 0.00 4.40
1907 6906 7.831690 TGAATAGTATCATGTGTTAAAAGGCCA 59.168 33.333 5.01 0.00 0.00 5.36
1908 6907 8.220755 TGAATAGTATCATGTGTTAAAAGGCC 57.779 34.615 0.00 0.00 0.00 5.19
1909 6908 9.884465 GATGAATAGTATCATGTGTTAAAAGGC 57.116 33.333 0.00 0.00 40.08 4.35
1912 6911 9.913310 TGGGATGAATAGTATCATGTGTTAAAA 57.087 29.630 0.00 0.00 40.08 1.52
1913 6912 9.913310 TTGGGATGAATAGTATCATGTGTTAAA 57.087 29.630 0.00 0.00 40.08 1.52
1914 6913 9.913310 TTTGGGATGAATAGTATCATGTGTTAA 57.087 29.630 0.00 0.00 40.08 2.01
1915 6914 9.913310 TTTTGGGATGAATAGTATCATGTGTTA 57.087 29.630 0.00 0.00 40.08 2.41
1916 6915 8.821686 TTTTGGGATGAATAGTATCATGTGTT 57.178 30.769 0.00 0.00 40.08 3.32
1917 6916 8.055181 ACTTTTGGGATGAATAGTATCATGTGT 58.945 33.333 0.00 0.00 40.08 3.72
1918 6917 8.455903 ACTTTTGGGATGAATAGTATCATGTG 57.544 34.615 0.00 0.00 40.08 3.21
1919 6918 7.721399 GGACTTTTGGGATGAATAGTATCATGT 59.279 37.037 0.00 0.00 40.08 3.21
1920 6919 7.720957 TGGACTTTTGGGATGAATAGTATCATG 59.279 37.037 0.00 0.00 40.08 3.07
1921 6920 7.815383 TGGACTTTTGGGATGAATAGTATCAT 58.185 34.615 0.00 0.00 42.62 2.45
1922 6921 7.206789 TGGACTTTTGGGATGAATAGTATCA 57.793 36.000 0.00 0.00 0.00 2.15
1923 6922 7.939039 TCATGGACTTTTGGGATGAATAGTATC 59.061 37.037 0.00 0.00 0.00 2.24
1924 6923 7.815383 TCATGGACTTTTGGGATGAATAGTAT 58.185 34.615 0.00 0.00 0.00 2.12
1925 6924 7.206789 TCATGGACTTTTGGGATGAATAGTA 57.793 36.000 0.00 0.00 0.00 1.82
1926 6925 6.078456 TCATGGACTTTTGGGATGAATAGT 57.922 37.500 0.00 0.00 0.00 2.12
1927 6926 7.592885 ATTCATGGACTTTTGGGATGAATAG 57.407 36.000 0.00 0.00 40.37 1.73
1928 6927 7.976414 AATTCATGGACTTTTGGGATGAATA 57.024 32.000 0.00 0.00 40.97 1.75
1929 6928 6.879367 AATTCATGGACTTTTGGGATGAAT 57.121 33.333 0.00 0.00 42.72 2.57
1930 6929 6.043012 ACAAATTCATGGACTTTTGGGATGAA 59.957 34.615 5.31 0.00 37.42 2.57
1931 6930 5.543405 ACAAATTCATGGACTTTTGGGATGA 59.457 36.000 5.31 0.00 34.23 2.92
1932 6931 5.797051 ACAAATTCATGGACTTTTGGGATG 58.203 37.500 5.31 0.00 34.23 3.51
1933 6932 6.270695 AGAACAAATTCATGGACTTTTGGGAT 59.729 34.615 5.31 0.00 37.29 3.85
1934 6933 5.602145 AGAACAAATTCATGGACTTTTGGGA 59.398 36.000 5.31 0.00 37.29 4.37
1935 6934 5.857268 AGAACAAATTCATGGACTTTTGGG 58.143 37.500 5.31 0.00 37.29 4.12
1936 6935 7.790823 AAAGAACAAATTCATGGACTTTTGG 57.209 32.000 5.31 0.00 37.29 3.28
1937 6936 9.493206 CAAAAAGAACAAATTCATGGACTTTTG 57.507 29.630 0.00 0.00 38.47 2.44
1938 6937 8.183536 GCAAAAAGAACAAATTCATGGACTTTT 58.816 29.630 0.00 0.00 39.24 2.27
1939 6938 7.336427 TGCAAAAAGAACAAATTCATGGACTTT 59.664 29.630 0.00 0.00 37.29 2.66
1940 6939 6.822676 TGCAAAAAGAACAAATTCATGGACTT 59.177 30.769 0.00 0.00 37.29 3.01
1941 6940 6.347696 TGCAAAAAGAACAAATTCATGGACT 58.652 32.000 0.00 0.00 37.29 3.85
1942 6941 6.479660 TCTGCAAAAAGAACAAATTCATGGAC 59.520 34.615 0.00 0.00 37.29 4.02
1943 6942 6.580788 TCTGCAAAAAGAACAAATTCATGGA 58.419 32.000 0.00 0.00 37.29 3.41
1944 6943 6.702723 TCTCTGCAAAAAGAACAAATTCATGG 59.297 34.615 0.00 0.00 37.29 3.66
1945 6944 7.703298 TCTCTGCAAAAAGAACAAATTCATG 57.297 32.000 0.00 0.00 37.29 3.07
1946 6945 8.145767 TGATCTCTGCAAAAAGAACAAATTCAT 58.854 29.630 0.00 0.00 37.29 2.57
1947 6946 7.436080 GTGATCTCTGCAAAAAGAACAAATTCA 59.564 33.333 5.35 0.00 37.29 2.57
1948 6947 7.436080 TGTGATCTCTGCAAAAAGAACAAATTC 59.564 33.333 5.35 0.00 34.78 2.17
1949 6948 7.267128 TGTGATCTCTGCAAAAAGAACAAATT 58.733 30.769 5.35 0.00 0.00 1.82
1950 6949 6.808829 TGTGATCTCTGCAAAAAGAACAAAT 58.191 32.000 5.35 0.00 0.00 2.32
1951 6950 6.206395 TGTGATCTCTGCAAAAAGAACAAA 57.794 33.333 5.35 0.00 0.00 2.83
1952 6951 5.833406 TGTGATCTCTGCAAAAAGAACAA 57.167 34.783 5.35 0.00 0.00 2.83
1953 6952 5.766670 AGATGTGATCTCTGCAAAAAGAACA 59.233 36.000 0.00 0.00 33.42 3.18
1954 6953 6.251655 AGATGTGATCTCTGCAAAAAGAAC 57.748 37.500 0.00 0.00 33.42 3.01
1967 6966 7.072202 AGGATGAAATACCTTGAGATGTGATCT 59.928 37.037 0.00 0.00 36.24 2.75
1968 6967 7.172875 CAGGATGAAATACCTTGAGATGTGATC 59.827 40.741 0.00 0.00 39.69 2.92
1969 6968 6.996879 CAGGATGAAATACCTTGAGATGTGAT 59.003 38.462 0.00 0.00 39.69 3.06
1970 6969 6.156775 TCAGGATGAAATACCTTGAGATGTGA 59.843 38.462 0.00 0.00 45.97 3.58
1971 6970 6.351711 TCAGGATGAAATACCTTGAGATGTG 58.648 40.000 0.00 0.00 45.97 3.21
1972 6971 6.566079 TCAGGATGAAATACCTTGAGATGT 57.434 37.500 0.00 0.00 45.97 3.06
1988 6987 8.296000 TGTGTATGTGTGTAAAATTTCAGGATG 58.704 33.333 0.00 0.00 37.54 3.51
1989 6988 8.402798 TGTGTATGTGTGTAAAATTTCAGGAT 57.597 30.769 0.00 0.00 0.00 3.24
1990 6989 7.809546 TGTGTATGTGTGTAAAATTTCAGGA 57.190 32.000 0.00 0.00 0.00 3.86
1991 6990 8.296000 TGATGTGTATGTGTGTAAAATTTCAGG 58.704 33.333 0.00 0.00 0.00 3.86
1992 6991 9.117145 GTGATGTGTATGTGTGTAAAATTTCAG 57.883 33.333 0.00 0.00 0.00 3.02
1993 6992 8.624776 TGTGATGTGTATGTGTGTAAAATTTCA 58.375 29.630 0.00 0.00 0.00 2.69
1994 6993 9.624697 ATGTGATGTGTATGTGTGTAAAATTTC 57.375 29.630 0.00 0.00 0.00 2.17
1995 6994 9.624697 GATGTGATGTGTATGTGTGTAAAATTT 57.375 29.630 0.00 0.00 0.00 1.82
1996 6995 8.243426 GGATGTGATGTGTATGTGTGTAAAATT 58.757 33.333 0.00 0.00 0.00 1.82
1997 6996 7.611467 AGGATGTGATGTGTATGTGTGTAAAAT 59.389 33.333 0.00 0.00 0.00 1.82
1998 6997 6.939730 AGGATGTGATGTGTATGTGTGTAAAA 59.060 34.615 0.00 0.00 0.00 1.52
1999 6998 6.472016 AGGATGTGATGTGTATGTGTGTAAA 58.528 36.000 0.00 0.00 0.00 2.01
2000 6999 6.048732 AGGATGTGATGTGTATGTGTGTAA 57.951 37.500 0.00 0.00 0.00 2.41
2001 7000 5.675684 AGGATGTGATGTGTATGTGTGTA 57.324 39.130 0.00 0.00 0.00 2.90
2002 7001 4.558226 AGGATGTGATGTGTATGTGTGT 57.442 40.909 0.00 0.00 0.00 3.72
2003 7002 8.837788 ATATAAGGATGTGATGTGTATGTGTG 57.162 34.615 0.00 0.00 0.00 3.82
2004 7003 9.929180 GTATATAAGGATGTGATGTGTATGTGT 57.071 33.333 0.00 0.00 0.00 3.72
2010 7009 9.982651 GTACAAGTATATAAGGATGTGATGTGT 57.017 33.333 0.00 0.00 0.00 3.72
2011 7010 9.981114 TGTACAAGTATATAAGGATGTGATGTG 57.019 33.333 0.00 0.00 0.00 3.21
2090 7089 2.961424 CTCCATGGAGGCCGTTTTT 58.039 52.632 31.14 0.00 38.51 1.94
2091 7090 4.743018 CTCCATGGAGGCCGTTTT 57.257 55.556 31.14 0.00 38.51 2.43
2099 7098 1.153005 GAGCTTGGCCTCCATGGAG 60.153 63.158 31.69 31.69 41.63 3.86
2100 7099 3.001514 GAGCTTGGCCTCCATGGA 58.998 61.111 15.27 15.27 38.35 3.41
2106 7105 0.108472 GCATTTTGGAGCTTGGCCTC 60.108 55.000 3.32 0.00 0.00 4.70
2107 7106 1.547472 GGCATTTTGGAGCTTGGCCT 61.547 55.000 3.32 0.00 37.00 5.19
2108 7107 1.078918 GGCATTTTGGAGCTTGGCC 60.079 57.895 0.00 0.00 0.00 5.36
2109 7108 1.446618 CGGCATTTTGGAGCTTGGC 60.447 57.895 0.00 0.00 0.00 4.52
2110 7109 0.318120 AACGGCATTTTGGAGCTTGG 59.682 50.000 0.00 0.00 0.00 3.61
2111 7110 1.270550 AGAACGGCATTTTGGAGCTTG 59.729 47.619 0.00 0.00 0.00 4.01
2112 7111 1.541588 GAGAACGGCATTTTGGAGCTT 59.458 47.619 0.00 0.00 0.00 3.74
2113 7112 1.168714 GAGAACGGCATTTTGGAGCT 58.831 50.000 0.00 0.00 0.00 4.09
2114 7113 0.179189 CGAGAACGGCATTTTGGAGC 60.179 55.000 0.00 0.00 35.72 4.70
2115 7114 0.179189 GCGAGAACGGCATTTTGGAG 60.179 55.000 0.00 0.00 40.15 3.86
2116 7115 0.605319 AGCGAGAACGGCATTTTGGA 60.605 50.000 0.00 0.00 40.15 3.53
2117 7116 1.062587 CTAGCGAGAACGGCATTTTGG 59.937 52.381 0.00 0.00 40.15 3.28
2118 7117 1.999735 TCTAGCGAGAACGGCATTTTG 59.000 47.619 0.00 0.00 40.15 2.44
2119 7118 2.000447 GTCTAGCGAGAACGGCATTTT 59.000 47.619 0.00 0.00 40.15 1.82
2120 7119 1.204941 AGTCTAGCGAGAACGGCATTT 59.795 47.619 0.00 0.00 40.15 2.32
2121 7120 0.818296 AGTCTAGCGAGAACGGCATT 59.182 50.000 0.00 0.00 40.15 3.56
2122 7121 1.676746 TAGTCTAGCGAGAACGGCAT 58.323 50.000 0.00 0.00 40.15 4.40
2123 7122 1.676746 ATAGTCTAGCGAGAACGGCA 58.323 50.000 0.00 0.00 40.15 5.69
2124 7123 2.778187 AATAGTCTAGCGAGAACGGC 57.222 50.000 0.00 0.00 40.15 5.68
2125 7124 7.695869 AATTAAAATAGTCTAGCGAGAACGG 57.304 36.000 0.00 0.00 40.15 4.44
2147 8782 4.659115 ACCGGCCTGAAAAGTAACTAAAT 58.341 39.130 0.00 0.00 0.00 1.40
2207 8842 1.806542 AGACTAAATGCACGCCAACAG 59.193 47.619 0.00 0.00 0.00 3.16
2208 8843 1.804151 GAGACTAAATGCACGCCAACA 59.196 47.619 0.00 0.00 0.00 3.33
2214 8849 5.597813 AACAAGAAGAGACTAAATGCACG 57.402 39.130 0.00 0.00 0.00 5.34
2259 8894 7.874016 TGTACTCGGTTTTCACTTATACACAAT 59.126 33.333 0.00 0.00 0.00 2.71
2268 8903 3.311596 GCTTGTGTACTCGGTTTTCACTT 59.688 43.478 0.00 0.00 0.00 3.16
2269 8904 2.870411 GCTTGTGTACTCGGTTTTCACT 59.130 45.455 0.00 0.00 0.00 3.41
2270 8905 2.610374 TGCTTGTGTACTCGGTTTTCAC 59.390 45.455 0.00 0.00 0.00 3.18
2271 8906 2.610374 GTGCTTGTGTACTCGGTTTTCA 59.390 45.455 0.00 0.00 0.00 2.69
2272 8907 2.610374 TGTGCTTGTGTACTCGGTTTTC 59.390 45.455 0.00 0.00 0.00 2.29
2273 8908 2.612212 CTGTGCTTGTGTACTCGGTTTT 59.388 45.455 0.00 0.00 0.00 2.43
2274 8909 2.159014 TCTGTGCTTGTGTACTCGGTTT 60.159 45.455 0.00 0.00 0.00 3.27
2276 8911 1.000163 CTCTGTGCTTGTGTACTCGGT 60.000 52.381 0.00 0.00 0.00 4.69
2277 8912 1.269723 TCTCTGTGCTTGTGTACTCGG 59.730 52.381 0.00 0.00 0.00 4.63
2278 8913 2.706555 TCTCTGTGCTTGTGTACTCG 57.293 50.000 0.00 0.00 0.00 4.18
2281 8916 2.739292 TCGTTCTCTGTGCTTGTGTAC 58.261 47.619 0.00 0.00 0.00 2.90
2282 8917 3.317150 CATCGTTCTCTGTGCTTGTGTA 58.683 45.455 0.00 0.00 0.00 2.90
2283 8918 2.138320 CATCGTTCTCTGTGCTTGTGT 58.862 47.619 0.00 0.00 0.00 3.72
2284 8919 1.462283 CCATCGTTCTCTGTGCTTGTG 59.538 52.381 0.00 0.00 0.00 3.33
2286 8921 2.084610 TCCATCGTTCTCTGTGCTTG 57.915 50.000 0.00 0.00 0.00 4.01
2287 8922 2.419297 GGATCCATCGTTCTCTGTGCTT 60.419 50.000 6.95 0.00 0.00 3.91
2288 8923 1.137872 GGATCCATCGTTCTCTGTGCT 59.862 52.381 6.95 0.00 0.00 4.40
2289 8924 1.576356 GGATCCATCGTTCTCTGTGC 58.424 55.000 6.95 0.00 0.00 4.57
2290 8925 1.482182 TGGGATCCATCGTTCTCTGTG 59.518 52.381 15.23 0.00 0.00 3.66
2291 8926 1.759445 CTGGGATCCATCGTTCTCTGT 59.241 52.381 15.23 0.00 30.82 3.41
2292 8927 1.069823 CCTGGGATCCATCGTTCTCTG 59.930 57.143 15.23 0.00 30.82 3.35
2293 8928 1.343478 ACCTGGGATCCATCGTTCTCT 60.343 52.381 15.23 0.00 30.82 3.10
2294 8929 1.123928 ACCTGGGATCCATCGTTCTC 58.876 55.000 15.23 0.00 30.82 2.87
2299 8934 3.838244 TTTTCTACCTGGGATCCATCG 57.162 47.619 15.23 1.60 30.82 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.