Multiple sequence alignment - TraesCS1B01G327500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G327500 chr1B 100.000 6966 0 0 1 6966 553637822 553630857 0.000000e+00 12864.0
1 TraesCS1B01G327500 chr1B 98.065 672 12 1 1 671 622579170 622578499 0.000000e+00 1168.0
2 TraesCS1B01G327500 chr1D 93.219 2979 147 25 3266 6192 410795903 410792928 0.000000e+00 4331.0
3 TraesCS1B01G327500 chr1D 89.787 1312 89 19 1024 2306 410798287 410796992 0.000000e+00 1639.0
4 TraesCS1B01G327500 chr1D 90.447 963 82 9 2300 3259 410796942 410795987 0.000000e+00 1260.0
5 TraesCS1B01G327500 chr1D 92.980 698 34 6 6280 6966 410792680 410791987 0.000000e+00 1003.0
6 TraesCS1B01G327500 chr1D 87.975 158 15 3 730 886 445591264 445591418 4.290000e-42 183.0
7 TraesCS1B01G327500 chr1D 86.826 167 17 5 708 874 411982088 411982249 1.540000e-41 182.0
8 TraesCS1B01G327500 chr1A 94.180 2560 100 22 3681 6192 507081462 507078904 0.000000e+00 3856.0
9 TraesCS1B01G327500 chr1A 93.279 2470 119 27 1024 3469 507084285 507081839 0.000000e+00 3598.0
10 TraesCS1B01G327500 chr1A 92.518 695 40 6 6280 6966 507078658 507077968 0.000000e+00 985.0
11 TraesCS1B01G327500 chr1A 93.519 216 13 1 3468 3682 507081756 507081541 3.130000e-83 320.0
12 TraesCS1B01G327500 chr7B 98.071 674 12 1 1 673 706158871 706159544 0.000000e+00 1171.0
13 TraesCS1B01G327500 chr7B 98.065 672 12 1 1 671 721101045 721100374 0.000000e+00 1168.0
14 TraesCS1B01G327500 chr7B 91.216 148 13 0 727 874 73586236 73586383 1.180000e-47 202.0
15 TraesCS1B01G327500 chr7B 88.816 152 17 0 723 874 330252628 330252477 3.320000e-43 187.0
16 TraesCS1B01G327500 chr7B 85.507 69 9 1 6598 6666 609840428 609840495 3.490000e-08 71.3
17 TraesCS1B01G327500 chr3B 98.071 674 12 1 1 674 775441770 775442442 0.000000e+00 1171.0
18 TraesCS1B01G327500 chr3B 97.914 671 14 0 1 671 679527494 679528164 0.000000e+00 1162.0
19 TraesCS1B01G327500 chr3B 90.141 71 6 1 6598 6668 737762093 737762024 2.680000e-14 91.6
20 TraesCS1B01G327500 chr2B 97.923 674 12 2 1 674 49526563 49527234 0.000000e+00 1166.0
21 TraesCS1B01G327500 chr2B 92.394 355 22 2 5826 6176 234631643 234631290 1.040000e-137 501.0
22 TraesCS1B01G327500 chr2B 91.034 145 13 0 730 874 184952754 184952898 5.510000e-46 196.0
23 TraesCS1B01G327500 chr5B 97.778 675 14 1 1 674 590556227 590556901 0.000000e+00 1162.0
24 TraesCS1B01G327500 chr5B 97.768 672 13 2 1 671 662428463 662429133 0.000000e+00 1157.0
25 TraesCS1B01G327500 chr4B 97.637 677 15 1 1 676 579361697 579361021 0.000000e+00 1160.0
26 TraesCS1B01G327500 chr5D 91.034 145 13 0 730 874 322385098 322384954 5.510000e-46 196.0
27 TraesCS1B01G327500 chr5D 89.333 150 14 2 726 874 69953715 69953567 3.320000e-43 187.0
28 TraesCS1B01G327500 chr4D 88.961 154 16 1 721 874 75782226 75782074 9.220000e-44 189.0
29 TraesCS1B01G327500 chr4A 88.816 152 17 0 723 874 673268522 673268371 3.320000e-43 187.0
30 TraesCS1B01G327500 chr3A 82.353 204 17 6 6596 6790 708003410 708003217 7.230000e-35 159.0
31 TraesCS1B01G327500 chr3D 90.278 72 6 1 6598 6669 554962308 554962378 7.440000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G327500 chr1B 553630857 553637822 6965 True 12864.00 12864 100.00000 1 6966 1 chr1B.!!$R1 6965
1 TraesCS1B01G327500 chr1B 622578499 622579170 671 True 1168.00 1168 98.06500 1 671 1 chr1B.!!$R2 670
2 TraesCS1B01G327500 chr1D 410791987 410798287 6300 True 2058.25 4331 91.60825 1024 6966 4 chr1D.!!$R1 5942
3 TraesCS1B01G327500 chr1A 507077968 507084285 6317 True 2189.75 3856 93.37400 1024 6966 4 chr1A.!!$R1 5942
4 TraesCS1B01G327500 chr7B 706158871 706159544 673 False 1171.00 1171 98.07100 1 673 1 chr7B.!!$F3 672
5 TraesCS1B01G327500 chr7B 721100374 721101045 671 True 1168.00 1168 98.06500 1 671 1 chr7B.!!$R2 670
6 TraesCS1B01G327500 chr3B 775441770 775442442 672 False 1171.00 1171 98.07100 1 674 1 chr3B.!!$F2 673
7 TraesCS1B01G327500 chr3B 679527494 679528164 670 False 1162.00 1162 97.91400 1 671 1 chr3B.!!$F1 670
8 TraesCS1B01G327500 chr2B 49526563 49527234 671 False 1166.00 1166 97.92300 1 674 1 chr2B.!!$F1 673
9 TraesCS1B01G327500 chr5B 590556227 590556901 674 False 1162.00 1162 97.77800 1 674 1 chr5B.!!$F1 673
10 TraesCS1B01G327500 chr5B 662428463 662429133 670 False 1157.00 1157 97.76800 1 671 1 chr5B.!!$F2 670
11 TraesCS1B01G327500 chr4B 579361021 579361697 676 True 1160.00 1160 97.63700 1 676 1 chr4B.!!$R1 675

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
993 997 0.036875 CAGTCCAGTTCCCCCACTTC 59.963 60.000 0.00 0.0 0.00 3.01 F
1157 1162 0.030399 GGTCAGTACCCACCCCCTAT 60.030 60.000 0.00 0.0 40.21 2.57 F
1356 1370 0.530744 AGCCTAATCGCGTGACTTGA 59.469 50.000 5.77 0.0 0.00 3.02 F
2894 2987 1.470098 CAATAGCCAAGTCTGCCACAC 59.530 52.381 0.00 0.0 0.00 3.82 F
3650 3912 1.134788 CATCCACTGTCTTCCCGGTAC 60.135 57.143 0.00 0.0 0.00 3.34 F
4449 4800 1.005450 GTGTTTATCTCCAAGGGGCCA 59.995 52.381 4.39 0.0 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1834 1858 1.266175 CACTTTGACAGCTTGGCAGAG 59.734 52.381 7.66 7.66 42.78 3.35 R
3056 3151 0.605319 GCTGTGGAATCGGTGGAACA 60.605 55.000 0.00 0.00 39.98 3.18 R
3342 3514 3.003689 CAGTGAGGACGTGCAAAGAAAAT 59.996 43.478 10.52 0.00 0.00 1.82 R
3996 4347 1.005687 TCCATGCCACATGATTCCACA 59.994 47.619 9.10 0.00 0.00 4.17 R
5197 5563 0.618458 GAGGTATTGTGCTCCCACCA 59.382 55.000 0.00 0.00 41.35 4.17 R
6268 6714 0.391597 ACTTGGGTACTGGTGTGACG 59.608 55.000 0.00 0.00 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
545 546 0.316841 GCAAAGTGGGCCAATTTCGA 59.683 50.000 27.50 0.00 29.07 3.71
685 689 3.295800 CCTAAGCGGAGGGAACGT 58.704 61.111 0.00 0.00 32.39 3.99
686 690 1.153628 CCTAAGCGGAGGGAACGTG 60.154 63.158 0.00 0.00 32.39 4.49
687 691 1.590147 CTAAGCGGAGGGAACGTGT 59.410 57.895 0.00 0.00 0.00 4.49
688 692 0.736325 CTAAGCGGAGGGAACGTGTG 60.736 60.000 0.00 0.00 0.00 3.82
689 693 2.775032 TAAGCGGAGGGAACGTGTGC 62.775 60.000 0.00 0.00 0.00 4.57
690 694 4.681978 GCGGAGGGAACGTGTGCT 62.682 66.667 0.00 0.00 0.00 4.40
691 695 2.967397 CGGAGGGAACGTGTGCTA 59.033 61.111 0.00 0.00 0.00 3.49
692 696 1.515954 CGGAGGGAACGTGTGCTAT 59.484 57.895 0.00 0.00 0.00 2.97
693 697 0.527817 CGGAGGGAACGTGTGCTATC 60.528 60.000 0.00 0.00 0.00 2.08
694 698 0.824759 GGAGGGAACGTGTGCTATCT 59.175 55.000 0.00 0.00 0.00 1.98
695 699 2.029623 GGAGGGAACGTGTGCTATCTA 58.970 52.381 0.00 0.00 0.00 1.98
696 700 2.034812 GGAGGGAACGTGTGCTATCTAG 59.965 54.545 0.00 0.00 0.00 2.43
697 701 2.032620 AGGGAACGTGTGCTATCTAGG 58.967 52.381 0.00 0.00 0.00 3.02
698 702 1.755380 GGGAACGTGTGCTATCTAGGT 59.245 52.381 0.00 0.00 0.00 3.08
699 703 2.167900 GGGAACGTGTGCTATCTAGGTT 59.832 50.000 0.00 0.00 0.00 3.50
700 704 3.187700 GGAACGTGTGCTATCTAGGTTG 58.812 50.000 0.00 0.00 0.00 3.77
701 705 3.368116 GGAACGTGTGCTATCTAGGTTGT 60.368 47.826 0.00 0.00 0.00 3.32
702 706 3.955650 ACGTGTGCTATCTAGGTTGTT 57.044 42.857 0.00 0.00 0.00 2.83
703 707 4.267349 ACGTGTGCTATCTAGGTTGTTT 57.733 40.909 0.00 0.00 0.00 2.83
704 708 4.638304 ACGTGTGCTATCTAGGTTGTTTT 58.362 39.130 0.00 0.00 0.00 2.43
705 709 5.786311 ACGTGTGCTATCTAGGTTGTTTTA 58.214 37.500 0.00 0.00 0.00 1.52
706 710 6.403878 ACGTGTGCTATCTAGGTTGTTTTAT 58.596 36.000 0.00 0.00 0.00 1.40
707 711 6.877322 ACGTGTGCTATCTAGGTTGTTTTATT 59.123 34.615 0.00 0.00 0.00 1.40
708 712 7.148474 ACGTGTGCTATCTAGGTTGTTTTATTG 60.148 37.037 0.00 0.00 0.00 1.90
709 713 7.148474 CGTGTGCTATCTAGGTTGTTTTATTGT 60.148 37.037 0.00 0.00 0.00 2.71
710 714 8.512138 GTGTGCTATCTAGGTTGTTTTATTGTT 58.488 33.333 0.00 0.00 0.00 2.83
711 715 9.073475 TGTGCTATCTAGGTTGTTTTATTGTTT 57.927 29.630 0.00 0.00 0.00 2.83
712 716 9.341899 GTGCTATCTAGGTTGTTTTATTGTTTG 57.658 33.333 0.00 0.00 0.00 2.93
713 717 8.519526 TGCTATCTAGGTTGTTTTATTGTTTGG 58.480 33.333 0.00 0.00 0.00 3.28
714 718 7.488150 GCTATCTAGGTTGTTTTATTGTTTGGC 59.512 37.037 0.00 0.00 0.00 4.52
715 719 6.969993 TCTAGGTTGTTTTATTGTTTGGCT 57.030 33.333 0.00 0.00 0.00 4.75
716 720 8.644374 ATCTAGGTTGTTTTATTGTTTGGCTA 57.356 30.769 0.00 0.00 0.00 3.93
717 721 7.878036 TCTAGGTTGTTTTATTGTTTGGCTAC 58.122 34.615 0.00 0.00 0.00 3.58
718 722 6.724893 AGGTTGTTTTATTGTTTGGCTACT 57.275 33.333 0.00 0.00 0.00 2.57
719 723 6.745116 AGGTTGTTTTATTGTTTGGCTACTC 58.255 36.000 0.00 0.00 0.00 2.59
720 724 6.322712 AGGTTGTTTTATTGTTTGGCTACTCA 59.677 34.615 0.00 0.00 0.00 3.41
721 725 6.640907 GGTTGTTTTATTGTTTGGCTACTCAG 59.359 38.462 0.00 0.00 0.00 3.35
722 726 6.952773 TGTTTTATTGTTTGGCTACTCAGT 57.047 33.333 0.00 0.00 0.00 3.41
723 727 8.347035 GTTGTTTTATTGTTTGGCTACTCAGTA 58.653 33.333 0.00 0.00 0.00 2.74
724 728 7.867752 TGTTTTATTGTTTGGCTACTCAGTAC 58.132 34.615 0.00 0.00 0.00 2.73
725 729 7.717875 TGTTTTATTGTTTGGCTACTCAGTACT 59.282 33.333 0.00 0.00 0.00 2.73
726 730 7.900782 TTTATTGTTTGGCTACTCAGTACTC 57.099 36.000 0.00 0.00 0.00 2.59
727 731 4.948341 TTGTTTGGCTACTCAGTACTCA 57.052 40.909 0.00 0.00 0.00 3.41
728 732 5.483685 TTGTTTGGCTACTCAGTACTCAT 57.516 39.130 0.00 0.00 0.00 2.90
729 733 6.599356 TTGTTTGGCTACTCAGTACTCATA 57.401 37.500 0.00 0.00 0.00 2.15
730 734 6.791867 TGTTTGGCTACTCAGTACTCATAT 57.208 37.500 0.00 0.00 0.00 1.78
731 735 7.891498 TGTTTGGCTACTCAGTACTCATATA 57.109 36.000 0.00 0.00 0.00 0.86
732 736 7.713750 TGTTTGGCTACTCAGTACTCATATAC 58.286 38.462 0.00 0.00 0.00 1.47
733 737 7.560262 TGTTTGGCTACTCAGTACTCATATACT 59.440 37.037 0.00 0.00 35.72 2.12
734 738 8.414778 GTTTGGCTACTCAGTACTCATATACTT 58.585 37.037 0.00 0.00 32.92 2.24
735 739 7.747155 TGGCTACTCAGTACTCATATACTTC 57.253 40.000 0.00 0.00 32.92 3.01
736 740 7.287810 TGGCTACTCAGTACTCATATACTTCA 58.712 38.462 0.00 0.00 32.92 3.02
737 741 7.945109 TGGCTACTCAGTACTCATATACTTCAT 59.055 37.037 0.00 0.00 32.92 2.57
738 742 8.455682 GGCTACTCAGTACTCATATACTTCATC 58.544 40.741 0.00 0.00 32.92 2.92
739 743 8.455682 GCTACTCAGTACTCATATACTTCATCC 58.544 40.741 0.00 0.00 32.92 3.51
740 744 7.441890 ACTCAGTACTCATATACTTCATCCG 57.558 40.000 0.00 0.00 32.92 4.18
741 745 6.999272 ACTCAGTACTCATATACTTCATCCGT 59.001 38.462 0.00 0.00 32.92 4.69
742 746 7.502895 ACTCAGTACTCATATACTTCATCCGTT 59.497 37.037 0.00 0.00 32.92 4.44
743 747 7.872881 TCAGTACTCATATACTTCATCCGTTC 58.127 38.462 0.00 0.00 32.92 3.95
744 748 7.040617 TCAGTACTCATATACTTCATCCGTTCC 60.041 40.741 0.00 0.00 32.92 3.62
745 749 7.005296 AGTACTCATATACTTCATCCGTTCCT 58.995 38.462 0.00 0.00 30.99 3.36
746 750 8.162085 AGTACTCATATACTTCATCCGTTCCTA 58.838 37.037 0.00 0.00 30.99 2.94
747 751 7.834881 ACTCATATACTTCATCCGTTCCTAA 57.165 36.000 0.00 0.00 0.00 2.69
748 752 7.887381 ACTCATATACTTCATCCGTTCCTAAG 58.113 38.462 0.00 0.00 0.00 2.18
749 753 7.506261 ACTCATATACTTCATCCGTTCCTAAGT 59.494 37.037 0.00 0.00 34.86 2.24
750 754 8.929260 TCATATACTTCATCCGTTCCTAAGTA 57.071 34.615 0.00 0.00 37.14 2.24
751 755 9.529823 TCATATACTTCATCCGTTCCTAAGTAT 57.470 33.333 10.02 10.02 42.78 2.12
754 758 8.888579 ATACTTCATCCGTTCCTAAGTATTTG 57.111 34.615 0.00 0.00 39.25 2.32
755 759 6.708285 ACTTCATCCGTTCCTAAGTATTTGT 58.292 36.000 0.00 0.00 0.00 2.83
756 760 6.594159 ACTTCATCCGTTCCTAAGTATTTGTG 59.406 38.462 0.00 0.00 0.00 3.33
757 761 6.045072 TCATCCGTTCCTAAGTATTTGTGT 57.955 37.500 0.00 0.00 0.00 3.72
758 762 6.469410 TCATCCGTTCCTAAGTATTTGTGTT 58.531 36.000 0.00 0.00 0.00 3.32
759 763 6.938030 TCATCCGTTCCTAAGTATTTGTGTTT 59.062 34.615 0.00 0.00 0.00 2.83
760 764 8.095792 TCATCCGTTCCTAAGTATTTGTGTTTA 58.904 33.333 0.00 0.00 0.00 2.01
761 765 8.889717 CATCCGTTCCTAAGTATTTGTGTTTAT 58.110 33.333 0.00 0.00 0.00 1.40
763 767 9.590451 TCCGTTCCTAAGTATTTGTGTTTATAG 57.410 33.333 0.00 0.00 0.00 1.31
764 768 9.590451 CCGTTCCTAAGTATTTGTGTTTATAGA 57.410 33.333 0.00 0.00 0.00 1.98
854 858 7.865706 ACATCTTTATGTGGTAGTCCATTTC 57.134 36.000 0.00 0.00 44.79 2.17
855 859 7.402054 ACATCTTTATGTGGTAGTCCATTTCA 58.598 34.615 0.00 0.00 44.79 2.69
856 860 7.888021 ACATCTTTATGTGGTAGTCCATTTCAA 59.112 33.333 0.00 0.00 44.79 2.69
857 861 8.739039 CATCTTTATGTGGTAGTCCATTTCAAA 58.261 33.333 0.00 0.00 46.20 2.69
858 862 8.877864 TCTTTATGTGGTAGTCCATTTCAAAT 57.122 30.769 0.00 0.00 46.20 2.32
859 863 9.308000 TCTTTATGTGGTAGTCCATTTCAAATT 57.692 29.630 0.00 0.00 46.20 1.82
860 864 9.927668 CTTTATGTGGTAGTCCATTTCAAATTT 57.072 29.630 0.00 0.00 46.20 1.82
861 865 9.921637 TTTATGTGGTAGTCCATTTCAAATTTC 57.078 29.630 0.00 0.00 46.20 2.17
862 866 7.781324 ATGTGGTAGTCCATTTCAAATTTCT 57.219 32.000 0.00 0.00 46.20 2.52
863 867 8.877864 ATGTGGTAGTCCATTTCAAATTTCTA 57.122 30.769 0.00 0.00 46.20 2.10
864 868 8.698973 TGTGGTAGTCCATTTCAAATTTCTAA 57.301 30.769 0.00 0.00 46.20 2.10
865 869 9.137459 TGTGGTAGTCCATTTCAAATTTCTAAA 57.863 29.630 0.00 0.00 46.20 1.85
866 870 9.974980 GTGGTAGTCCATTTCAAATTTCTAAAA 57.025 29.630 0.00 0.00 46.20 1.52
877 881 9.640963 TTTCAAATTTCTAAAAAGACAAACGGA 57.359 25.926 0.00 0.00 0.00 4.69
878 882 8.850454 TCAAATTTCTAAAAAGACAAACGGAG 57.150 30.769 0.00 0.00 0.00 4.63
879 883 7.918562 TCAAATTTCTAAAAAGACAAACGGAGG 59.081 33.333 0.00 0.00 0.00 4.30
880 884 5.761165 TTTCTAAAAAGACAAACGGAGGG 57.239 39.130 0.00 0.00 0.00 4.30
881 885 4.693042 TCTAAAAAGACAAACGGAGGGA 57.307 40.909 0.00 0.00 0.00 4.20
882 886 4.638304 TCTAAAAAGACAAACGGAGGGAG 58.362 43.478 0.00 0.00 0.00 4.30
883 887 3.292492 AAAAAGACAAACGGAGGGAGT 57.708 42.857 0.00 0.00 0.00 3.85
884 888 4.426736 AAAAAGACAAACGGAGGGAGTA 57.573 40.909 0.00 0.00 0.00 2.59
885 889 3.679824 AAAGACAAACGGAGGGAGTAG 57.320 47.619 0.00 0.00 0.00 2.57
886 890 2.305858 AGACAAACGGAGGGAGTAGT 57.694 50.000 0.00 0.00 0.00 2.73
887 891 3.446442 AGACAAACGGAGGGAGTAGTA 57.554 47.619 0.00 0.00 0.00 1.82
888 892 3.087781 AGACAAACGGAGGGAGTAGTAC 58.912 50.000 0.00 0.00 0.00 2.73
889 893 3.087781 GACAAACGGAGGGAGTAGTACT 58.912 50.000 1.37 1.37 0.00 2.73
890 894 3.504375 ACAAACGGAGGGAGTAGTACTT 58.496 45.455 0.00 0.00 0.00 2.24
891 895 4.666512 ACAAACGGAGGGAGTAGTACTTA 58.333 43.478 0.00 0.00 0.00 2.24
892 896 5.079643 ACAAACGGAGGGAGTAGTACTTAA 58.920 41.667 0.00 0.00 0.00 1.85
893 897 5.539955 ACAAACGGAGGGAGTAGTACTTAAA 59.460 40.000 0.00 0.00 0.00 1.52
894 898 6.212187 ACAAACGGAGGGAGTAGTACTTAAAT 59.788 38.462 0.00 0.00 0.00 1.40
895 899 7.397192 ACAAACGGAGGGAGTAGTACTTAAATA 59.603 37.037 0.00 0.00 0.00 1.40
896 900 6.951062 ACGGAGGGAGTAGTACTTAAATAC 57.049 41.667 0.00 0.00 0.00 1.89
897 901 6.426587 ACGGAGGGAGTAGTACTTAAATACA 58.573 40.000 0.00 0.00 0.00 2.29
898 902 6.891908 ACGGAGGGAGTAGTACTTAAATACAA 59.108 38.462 0.00 0.00 0.00 2.41
899 903 7.067981 ACGGAGGGAGTAGTACTTAAATACAAG 59.932 40.741 0.00 0.00 0.00 3.16
900 904 7.067981 CGGAGGGAGTAGTACTTAAATACAAGT 59.932 40.741 0.00 0.00 41.56 3.16
901 905 8.412456 GGAGGGAGTAGTACTTAAATACAAGTC 58.588 40.741 0.00 0.00 39.45 3.01
902 906 7.994194 AGGGAGTAGTACTTAAATACAAGTCG 58.006 38.462 0.00 0.00 39.45 4.18
903 907 7.831193 AGGGAGTAGTACTTAAATACAAGTCGA 59.169 37.037 0.00 0.00 39.45 4.20
904 908 8.462016 GGGAGTAGTACTTAAATACAAGTCGAA 58.538 37.037 0.00 0.00 39.45 3.71
909 913 8.475331 AGTACTTAAATACAAGTCGAATGTGG 57.525 34.615 13.74 0.00 39.45 4.17
910 914 6.178239 ACTTAAATACAAGTCGAATGTGGC 57.822 37.500 13.74 0.00 33.41 5.01
911 915 5.938125 ACTTAAATACAAGTCGAATGTGGCT 59.062 36.000 13.74 2.70 33.41 4.75
912 916 7.101054 ACTTAAATACAAGTCGAATGTGGCTA 58.899 34.615 13.74 0.00 33.41 3.93
913 917 7.769044 ACTTAAATACAAGTCGAATGTGGCTAT 59.231 33.333 13.74 0.00 33.41 2.97
914 918 5.991328 AATACAAGTCGAATGTGGCTATG 57.009 39.130 13.74 0.00 32.27 2.23
915 919 2.632377 ACAAGTCGAATGTGGCTATGG 58.368 47.619 4.44 0.00 0.00 2.74
916 920 2.236146 ACAAGTCGAATGTGGCTATGGA 59.764 45.455 4.44 0.00 0.00 3.41
917 921 3.118261 ACAAGTCGAATGTGGCTATGGAT 60.118 43.478 4.44 0.00 0.00 3.41
918 922 3.117491 AGTCGAATGTGGCTATGGATG 57.883 47.619 0.00 0.00 0.00 3.51
919 923 1.532868 GTCGAATGTGGCTATGGATGC 59.467 52.381 0.00 0.00 0.00 3.91
920 924 1.140652 TCGAATGTGGCTATGGATGCA 59.859 47.619 0.00 0.00 0.00 3.96
921 925 1.265095 CGAATGTGGCTATGGATGCAC 59.735 52.381 0.00 0.00 0.00 4.57
922 926 2.300433 GAATGTGGCTATGGATGCACA 58.700 47.619 0.00 0.00 0.00 4.57
923 927 1.977056 ATGTGGCTATGGATGCACAG 58.023 50.000 0.00 0.00 0.00 3.66
924 928 0.620030 TGTGGCTATGGATGCACAGT 59.380 50.000 0.00 0.00 0.00 3.55
925 929 1.004628 TGTGGCTATGGATGCACAGTT 59.995 47.619 0.00 0.00 0.00 3.16
926 930 1.672881 GTGGCTATGGATGCACAGTTC 59.327 52.381 0.00 0.00 0.00 3.01
927 931 0.940126 GGCTATGGATGCACAGTTCG 59.060 55.000 0.00 0.00 0.00 3.95
928 932 1.656652 GCTATGGATGCACAGTTCGT 58.343 50.000 0.00 0.00 0.00 3.85
929 933 2.009774 GCTATGGATGCACAGTTCGTT 58.990 47.619 0.00 0.00 0.00 3.85
930 934 2.420022 GCTATGGATGCACAGTTCGTTT 59.580 45.455 0.00 0.00 0.00 3.60
931 935 3.119849 GCTATGGATGCACAGTTCGTTTT 60.120 43.478 0.00 0.00 0.00 2.43
932 936 4.094294 GCTATGGATGCACAGTTCGTTTTA 59.906 41.667 0.00 0.00 0.00 1.52
933 937 5.391523 GCTATGGATGCACAGTTCGTTTTAA 60.392 40.000 0.00 0.00 0.00 1.52
934 938 4.217754 TGGATGCACAGTTCGTTTTAAC 57.782 40.909 0.00 0.00 0.00 2.01
935 939 3.003897 TGGATGCACAGTTCGTTTTAACC 59.996 43.478 0.00 0.00 0.00 2.85
936 940 3.561503 GATGCACAGTTCGTTTTAACCC 58.438 45.455 0.00 0.00 0.00 4.11
937 941 1.331138 TGCACAGTTCGTTTTAACCCG 59.669 47.619 0.00 0.00 0.00 5.28
938 942 1.922880 GCACAGTTCGTTTTAACCCGC 60.923 52.381 0.00 0.00 0.00 6.13
939 943 1.600485 CACAGTTCGTTTTAACCCGCT 59.400 47.619 0.00 0.00 0.00 5.52
940 944 2.032426 CACAGTTCGTTTTAACCCGCTT 59.968 45.455 0.00 0.00 0.00 4.68
941 945 3.248125 CACAGTTCGTTTTAACCCGCTTA 59.752 43.478 0.00 0.00 0.00 3.09
942 946 3.248363 ACAGTTCGTTTTAACCCGCTTAC 59.752 43.478 0.00 0.00 0.00 2.34
943 947 2.807967 AGTTCGTTTTAACCCGCTTACC 59.192 45.455 0.00 0.00 0.00 2.85
944 948 2.540265 TCGTTTTAACCCGCTTACCA 57.460 45.000 0.00 0.00 0.00 3.25
945 949 2.415776 TCGTTTTAACCCGCTTACCAG 58.584 47.619 0.00 0.00 0.00 4.00
946 950 1.135888 CGTTTTAACCCGCTTACCAGC 60.136 52.381 0.00 0.00 43.41 4.85
950 954 0.905809 TAACCCGCTTACCAGCAGGA 60.906 55.000 0.35 0.00 45.65 3.86
951 955 2.185310 AACCCGCTTACCAGCAGGAG 62.185 60.000 0.35 0.00 45.65 3.69
952 956 2.660064 CCCGCTTACCAGCAGGAGT 61.660 63.158 0.35 0.00 45.65 3.85
953 957 2.185310 CCCGCTTACCAGCAGGAGTT 62.185 60.000 0.35 0.00 45.65 3.01
955 959 3.160872 GCTTACCAGCAGGAGTTCC 57.839 57.895 0.35 0.00 46.49 3.62
966 970 1.836802 AGGAGTTCCTGGTAGTCGTC 58.163 55.000 0.00 0.00 46.55 4.20
967 971 0.450983 GGAGTTCCTGGTAGTCGTCG 59.549 60.000 2.55 0.00 0.00 5.12
968 972 1.163554 GAGTTCCTGGTAGTCGTCGT 58.836 55.000 0.00 0.00 0.00 4.34
969 973 1.538950 GAGTTCCTGGTAGTCGTCGTT 59.461 52.381 0.00 0.00 0.00 3.85
970 974 2.744202 GAGTTCCTGGTAGTCGTCGTTA 59.256 50.000 0.00 0.00 0.00 3.18
971 975 2.746362 AGTTCCTGGTAGTCGTCGTTAG 59.254 50.000 0.00 0.00 0.00 2.34
972 976 2.479566 TCCTGGTAGTCGTCGTTAGT 57.520 50.000 0.00 0.00 0.00 2.24
973 977 2.350522 TCCTGGTAGTCGTCGTTAGTC 58.649 52.381 0.00 0.00 0.00 2.59
974 978 1.399791 CCTGGTAGTCGTCGTTAGTCC 59.600 57.143 0.00 0.00 0.00 3.85
975 979 2.079158 CTGGTAGTCGTCGTTAGTCCA 58.921 52.381 0.00 0.00 0.00 4.02
976 980 2.079158 TGGTAGTCGTCGTTAGTCCAG 58.921 52.381 0.00 0.00 0.00 3.86
977 981 2.079925 GGTAGTCGTCGTTAGTCCAGT 58.920 52.381 0.00 0.00 0.00 4.00
978 982 2.095053 GGTAGTCGTCGTTAGTCCAGTC 59.905 54.545 0.00 0.00 0.00 3.51
979 983 1.163554 AGTCGTCGTTAGTCCAGTCC 58.836 55.000 0.00 0.00 0.00 3.85
980 984 0.877071 GTCGTCGTTAGTCCAGTCCA 59.123 55.000 0.00 0.00 0.00 4.02
981 985 1.135746 GTCGTCGTTAGTCCAGTCCAG 60.136 57.143 0.00 0.00 0.00 3.86
982 986 0.879765 CGTCGTTAGTCCAGTCCAGT 59.120 55.000 0.00 0.00 0.00 4.00
983 987 1.268899 CGTCGTTAGTCCAGTCCAGTT 59.731 52.381 0.00 0.00 0.00 3.16
984 988 2.667724 CGTCGTTAGTCCAGTCCAGTTC 60.668 54.545 0.00 0.00 0.00 3.01
985 989 1.891150 TCGTTAGTCCAGTCCAGTTCC 59.109 52.381 0.00 0.00 0.00 3.62
986 990 1.067071 CGTTAGTCCAGTCCAGTTCCC 60.067 57.143 0.00 0.00 0.00 3.97
987 991 1.278413 GTTAGTCCAGTCCAGTTCCCC 59.722 57.143 0.00 0.00 0.00 4.81
988 992 0.252558 TAGTCCAGTCCAGTTCCCCC 60.253 60.000 0.00 0.00 0.00 5.40
989 993 1.846124 GTCCAGTCCAGTTCCCCCA 60.846 63.158 0.00 0.00 0.00 4.96
990 994 1.846124 TCCAGTCCAGTTCCCCCAC 60.846 63.158 0.00 0.00 0.00 4.61
991 995 1.847968 CCAGTCCAGTTCCCCCACT 60.848 63.158 0.00 0.00 0.00 4.00
992 996 1.427072 CCAGTCCAGTTCCCCCACTT 61.427 60.000 0.00 0.00 0.00 3.16
993 997 0.036875 CAGTCCAGTTCCCCCACTTC 59.963 60.000 0.00 0.00 0.00 3.01
994 998 0.401395 AGTCCAGTTCCCCCACTTCA 60.401 55.000 0.00 0.00 0.00 3.02
995 999 0.476771 GTCCAGTTCCCCCACTTCAA 59.523 55.000 0.00 0.00 0.00 2.69
996 1000 0.476771 TCCAGTTCCCCCACTTCAAC 59.523 55.000 0.00 0.00 0.00 3.18
997 1001 0.539669 CCAGTTCCCCCACTTCAACC 60.540 60.000 0.00 0.00 0.00 3.77
998 1002 0.184933 CAGTTCCCCCACTTCAACCA 59.815 55.000 0.00 0.00 0.00 3.67
999 1003 0.478507 AGTTCCCCCACTTCAACCAG 59.521 55.000 0.00 0.00 0.00 4.00
1000 1004 1.152830 TTCCCCCACTTCAACCAGC 59.847 57.895 0.00 0.00 0.00 4.85
1001 1005 1.650242 TTCCCCCACTTCAACCAGCA 61.650 55.000 0.00 0.00 0.00 4.41
1002 1006 1.152567 CCCCCACTTCAACCAGCAA 60.153 57.895 0.00 0.00 0.00 3.91
1003 1007 0.758685 CCCCCACTTCAACCAGCAAA 60.759 55.000 0.00 0.00 0.00 3.68
1004 1008 0.389025 CCCCACTTCAACCAGCAAAC 59.611 55.000 0.00 0.00 0.00 2.93
1005 1009 1.110442 CCCACTTCAACCAGCAAACA 58.890 50.000 0.00 0.00 0.00 2.83
1006 1010 1.480137 CCCACTTCAACCAGCAAACAA 59.520 47.619 0.00 0.00 0.00 2.83
1007 1011 2.093764 CCCACTTCAACCAGCAAACAAA 60.094 45.455 0.00 0.00 0.00 2.83
1008 1012 3.189285 CCACTTCAACCAGCAAACAAAG 58.811 45.455 0.00 0.00 0.00 2.77
1009 1013 3.368323 CCACTTCAACCAGCAAACAAAGT 60.368 43.478 0.00 0.00 0.00 2.66
1010 1014 4.244862 CACTTCAACCAGCAAACAAAGTT 58.755 39.130 0.00 0.00 0.00 2.66
1011 1015 5.406649 CACTTCAACCAGCAAACAAAGTTA 58.593 37.500 0.00 0.00 0.00 2.24
1012 1016 5.516339 CACTTCAACCAGCAAACAAAGTTAG 59.484 40.000 0.00 0.00 0.00 2.34
1013 1017 4.040445 TCAACCAGCAAACAAAGTTAGC 57.960 40.909 0.00 0.00 0.00 3.09
1014 1018 2.774439 ACCAGCAAACAAAGTTAGCG 57.226 45.000 0.00 0.00 0.00 4.26
1015 1019 1.269051 ACCAGCAAACAAAGTTAGCGC 60.269 47.619 0.00 0.00 0.00 5.92
1016 1020 1.268999 CCAGCAAACAAAGTTAGCGCA 60.269 47.619 11.47 0.00 0.00 6.09
1017 1021 2.458951 CAGCAAACAAAGTTAGCGCAA 58.541 42.857 11.47 0.00 0.00 4.85
1018 1022 2.857152 CAGCAAACAAAGTTAGCGCAAA 59.143 40.909 11.47 0.00 0.00 3.68
1019 1023 3.305629 CAGCAAACAAAGTTAGCGCAAAA 59.694 39.130 11.47 0.00 0.00 2.44
1020 1024 3.929610 AGCAAACAAAGTTAGCGCAAAAA 59.070 34.783 11.47 0.00 0.00 1.94
1039 1043 4.584327 AAAATAAAAAGGTCAGCGCAGT 57.416 36.364 11.47 0.00 0.00 4.40
1047 1051 2.917227 TCAGCGCAGTGGGAGACA 60.917 61.111 11.47 0.00 0.00 3.41
1156 1161 1.393341 GGTCAGTACCCACCCCCTA 59.607 63.158 0.00 0.00 40.21 3.53
1157 1162 0.030399 GGTCAGTACCCACCCCCTAT 60.030 60.000 0.00 0.00 40.21 2.57
1158 1163 1.627195 GGTCAGTACCCACCCCCTATT 60.627 57.143 0.00 0.00 40.21 1.73
1176 1181 6.784969 CCCCTATTCTCTTCATCTTCCTCTTA 59.215 42.308 0.00 0.00 0.00 2.10
1182 1187 7.969690 TCTCTTCATCTTCCTCTTACTCAAT 57.030 36.000 0.00 0.00 0.00 2.57
1353 1367 1.064296 CGAGCCTAATCGCGTGACT 59.936 57.895 5.77 0.00 35.66 3.41
1356 1370 0.530744 AGCCTAATCGCGTGACTTGA 59.469 50.000 5.77 0.00 0.00 3.02
1602 1625 2.019984 GTCTGATTGGGGTGATTCTGC 58.980 52.381 0.00 0.00 0.00 4.26
1748 1772 9.411801 CTGTATACCAGTATTGTAATGTGCTAG 57.588 37.037 0.00 0.00 36.37 3.42
1768 1792 3.009723 AGTTATTCACACTTGCATCCCG 58.990 45.455 0.00 0.00 0.00 5.14
1903 1933 3.457234 TGCAGATACTTAGATTGGTGCG 58.543 45.455 0.00 0.00 32.23 5.34
1910 1941 9.256477 CAGATACTTAGATTGGTGCGTATTTTA 57.744 33.333 0.00 0.00 0.00 1.52
1929 1960 9.049523 GTATTTTAGGGGGTTATTAAGACTTCG 57.950 37.037 0.00 0.00 0.00 3.79
1930 1961 6.625532 TTTAGGGGGTTATTAAGACTTCGT 57.374 37.500 0.00 0.00 0.00 3.85
1939 1970 7.043565 GGTTATTAAGACTTCGTACCAATGGA 58.956 38.462 6.16 0.00 0.00 3.41
2066 2097 9.072375 CCTGAAAGAGTTTTAGGAAGATTTTCT 57.928 33.333 4.58 0.00 46.29 2.52
2198 2229 5.105917 TGAGTGTTTCTTTTCCCTGTGAAAC 60.106 40.000 9.60 9.60 42.56 2.78
2217 2248 8.186163 TGTGAAACCATATACTCGTTACTAGTG 58.814 37.037 5.39 0.00 34.36 2.74
2322 2358 3.118408 TGCTATAAGAATGGGAAGTGCGT 60.118 43.478 0.00 0.00 0.00 5.24
2370 2462 5.816258 GTGCTACTTGGTAATAGGAAAGGTC 59.184 44.000 0.00 0.00 0.00 3.85
2581 2674 9.809395 AGATGGAAAATATGATTCATCATCAGT 57.191 29.630 18.47 4.35 45.52 3.41
2767 2860 5.700402 ACTTGTCTGCCCTGATTTATAGT 57.300 39.130 0.00 0.00 0.00 2.12
2803 2896 3.997021 CCGTTATCAGCCATTATCAGGTC 59.003 47.826 0.00 0.00 0.00 3.85
2808 2901 4.422073 TCAGCCATTATCAGGTCGAAAT 57.578 40.909 0.00 0.00 0.00 2.17
2843 2936 4.717280 CCTCCCTTGAGTACAATAGGAAGT 59.283 45.833 8.31 0.00 37.65 3.01
2894 2987 1.470098 CAATAGCCAAGTCTGCCACAC 59.530 52.381 0.00 0.00 0.00 3.82
2906 2999 1.739466 CTGCCACACGAATTGCTGTAT 59.261 47.619 0.00 0.00 0.00 2.29
2956 3049 7.066284 AGTGTAAGGTTCATTATGATGCTGTTC 59.934 37.037 0.00 0.00 33.14 3.18
2997 3090 3.181530 CGTCTCAAGAATTACAAGGTGCG 60.182 47.826 0.00 0.00 0.00 5.34
2999 3092 1.810151 TCAAGAATTACAAGGTGCGCC 59.190 47.619 8.71 8.71 0.00 6.53
3056 3151 8.326529 TGATATCAGAATGCAGGACATATCAAT 58.673 33.333 0.00 0.00 38.34 2.57
3192 3287 9.745018 AATTCAGTATTAAGCATATGCACCTAT 57.255 29.630 28.62 17.29 45.16 2.57
3217 3312 6.110033 TGTGTTTGTAAGTTCAGTCAGCTAA 58.890 36.000 0.00 0.00 0.00 3.09
3232 3327 7.041721 CAGTCAGCTAAAACATGGAGTACATA 58.958 38.462 0.00 0.00 37.84 2.29
3233 3328 7.223582 CAGTCAGCTAAAACATGGAGTACATAG 59.776 40.741 0.00 0.00 37.84 2.23
3234 3329 7.042335 GTCAGCTAAAACATGGAGTACATAGT 58.958 38.462 0.00 0.00 37.84 2.12
3301 3473 9.013229 TGAAAACTTGATGCAACTACATATCTT 57.987 29.630 0.00 0.00 0.00 2.40
3342 3514 7.391148 AAACTCTGAAGTGTTGCTCTTTAAA 57.609 32.000 0.00 0.00 35.36 1.52
3382 3555 3.503748 CACTGAAGCTAAAAACCAGGGAG 59.496 47.826 0.00 0.00 30.24 4.30
3383 3556 3.138468 ACTGAAGCTAAAAACCAGGGAGT 59.862 43.478 0.00 0.00 0.00 3.85
3384 3557 4.349930 ACTGAAGCTAAAAACCAGGGAGTA 59.650 41.667 0.00 0.00 0.00 2.59
3409 3584 2.977914 TCTGTTTGAGGCATGTCTAGC 58.022 47.619 0.00 0.00 0.00 3.42
3431 3610 5.067413 AGCATGAAGGCTTATTCATTGTCAG 59.933 40.000 0.00 0.00 45.44 3.51
3459 3638 4.326826 TGTTCTAGTTTCTGCCATTGGAG 58.673 43.478 6.95 1.40 0.00 3.86
3461 3640 4.908601 TCTAGTTTCTGCCATTGGAGAA 57.091 40.909 6.95 9.78 0.00 2.87
3462 3641 4.836825 TCTAGTTTCTGCCATTGGAGAAG 58.163 43.478 6.95 0.45 30.03 2.85
3463 3642 3.795688 AGTTTCTGCCATTGGAGAAGA 57.204 42.857 6.95 3.02 30.03 2.87
3464 3643 3.416156 AGTTTCTGCCATTGGAGAAGAC 58.584 45.455 6.95 12.05 30.03 3.01
3465 3644 3.149196 GTTTCTGCCATTGGAGAAGACA 58.851 45.455 6.95 0.00 30.03 3.41
3466 3645 2.479566 TCTGCCATTGGAGAAGACAC 57.520 50.000 6.95 0.00 0.00 3.67
3525 3787 6.317789 TCTAAAAACAAGAGGCATTGTCAG 57.682 37.500 8.32 5.00 42.49 3.51
3529 3791 5.796424 AAACAAGAGGCATTGTCAGATTT 57.204 34.783 8.32 0.00 42.49 2.17
3605 3867 4.537433 CCTACCTCCAGGCGCTGC 62.537 72.222 7.64 0.00 39.32 5.25
3650 3912 1.134788 CATCCACTGTCTTCCCGGTAC 60.135 57.143 0.00 0.00 0.00 3.34
3764 4107 7.831691 TGATAAAAATTCTTGTCTTGTGGGA 57.168 32.000 0.00 0.00 0.00 4.37
3768 4111 6.484364 AAAATTCTTGTCTTGTGGGAATGT 57.516 33.333 0.00 0.00 0.00 2.71
3863 4214 6.094603 ACTTTTGCACATGGAAGAGATATGTC 59.905 38.462 10.09 0.00 33.06 3.06
3980 4331 9.903682 CTCAAATGAACTACTTGATGACAAAAT 57.096 29.630 0.00 0.00 35.49 1.82
3996 4347 6.862209 TGACAAAATTGCAGACAGTAAAACT 58.138 32.000 0.00 0.00 0.00 2.66
4159 4510 4.207891 TCAGGTATTCTCCTCAACAAGC 57.792 45.455 0.00 0.00 35.37 4.01
4201 4552 1.475682 CTCATCTTTTGGAGCCTTGGC 59.524 52.381 2.97 2.97 0.00 4.52
4410 4761 2.239654 GGATGATGGGGAGAAACAGACA 59.760 50.000 0.00 0.00 0.00 3.41
4449 4800 1.005450 GTGTTTATCTCCAAGGGGCCA 59.995 52.381 4.39 0.00 0.00 5.36
4481 4832 4.141756 TGCCTTGCTTCAAATGGAAAAGAA 60.142 37.500 0.00 0.00 34.44 2.52
4549 4900 4.037565 CAGCAGGGTCGTCTACATATGTTA 59.962 45.833 14.77 0.00 0.00 2.41
4592 4949 4.310769 CCTCGATCAGGTAATAAGCCTTG 58.689 47.826 0.00 0.00 37.53 3.61
4596 4953 5.071788 TCGATCAGGTAATAAGCCTTGGAAT 59.928 40.000 0.00 0.00 33.31 3.01
4618 4975 8.129211 GGAATCATAGTTTCCAAAATAGTTCCG 58.871 37.037 2.75 0.00 41.91 4.30
4924 5283 5.768317 AGGTATGCACAAACATTGTAACAC 58.232 37.500 0.00 0.00 43.23 3.32
4965 5324 1.068402 CCACTGTCAAATTGCATGCGA 60.068 47.619 10.79 10.79 0.00 5.10
4983 5342 6.525355 CATGCGATTTGTATCAGTATTACCG 58.475 40.000 0.00 0.00 0.00 4.02
5031 5390 3.585862 CGGAACTAGCTTTGCTGTCTTA 58.414 45.455 0.00 0.00 40.10 2.10
5078 5444 3.263425 GTGACCCACTTCCCTTCATTCTA 59.737 47.826 0.00 0.00 0.00 2.10
5080 5446 3.519913 GACCCACTTCCCTTCATTCTAGT 59.480 47.826 0.00 0.00 0.00 2.57
5084 5450 4.223923 CCACTTCCCTTCATTCTAGTGACT 59.776 45.833 0.00 0.00 36.07 3.41
5118 5484 7.283127 TGTCTTTGCAGTCATCTTAGTTTTCTT 59.717 33.333 0.00 0.00 0.00 2.52
5141 5507 1.838112 TCTAGCAAAGGCCCAACATG 58.162 50.000 0.00 0.00 42.56 3.21
5145 5511 1.818959 GCAAAGGCCCAACATGCTCA 61.819 55.000 0.00 0.00 34.29 4.26
5152 5518 1.134907 GCCCAACATGCTCATTTCCAG 60.135 52.381 0.00 0.00 0.00 3.86
5153 5519 1.134907 CCCAACATGCTCATTTCCAGC 60.135 52.381 0.00 0.00 37.40 4.85
5227 5593 4.631813 AGCACAATACCTCGTCTGAATTTC 59.368 41.667 0.00 0.00 0.00 2.17
5297 5663 8.271487 GTGCTTGTTCAAATCATCTTCTTTTTC 58.729 33.333 0.00 0.00 0.00 2.29
5466 5832 3.987745 TCTCTCCCATTTCTCAGTAGCT 58.012 45.455 0.00 0.00 0.00 3.32
5484 5850 3.009115 CCCCTGGGAAGAGCGGAA 61.009 66.667 16.20 0.00 37.50 4.30
5513 5879 5.485662 AAGTTTCGGAGTTCTCAAAGTTG 57.514 39.130 2.24 0.00 0.00 3.16
5517 5883 2.365617 TCGGAGTTCTCAAAGTTGCTCT 59.634 45.455 2.24 0.00 0.00 4.09
5643 6009 7.836479 AATGGATAGTACTAGTACCCTGAAC 57.164 40.000 25.97 13.95 36.75 3.18
5687 6054 9.981114 GGAAAAGAATGAAAAACTAAGGATTCA 57.019 29.630 0.00 0.00 36.35 2.57
5692 6059 9.807921 AGAATGAAAAACTAAGGATTCAGGTAA 57.192 29.630 0.00 0.00 35.47 2.85
5722 6089 3.448660 ACCAAAATGGCAGGCTCTAATTC 59.551 43.478 0.00 0.00 42.67 2.17
5726 6093 1.153168 GGCAGGCTCTAATTCGGCA 60.153 57.895 0.00 0.00 0.00 5.69
5735 6102 3.684788 GCTCTAATTCGGCAAAGTTCAGA 59.315 43.478 0.00 0.00 0.00 3.27
5770 6137 4.854399 TGAAAGTTCTACACAATTTGGCG 58.146 39.130 0.78 0.00 0.00 5.69
5791 6167 3.615155 GAAGGCCTTCAAAGCATACTCT 58.385 45.455 35.71 1.51 39.31 3.24
5792 6168 4.680708 CGAAGGCCTTCAAAGCATACTCTA 60.681 45.833 37.88 0.00 39.46 2.43
5794 6170 5.379706 AGGCCTTCAAAGCATACTCTAAT 57.620 39.130 0.00 0.00 0.00 1.73
5795 6171 5.372373 AGGCCTTCAAAGCATACTCTAATC 58.628 41.667 0.00 0.00 0.00 1.75
5797 6173 5.468409 GGCCTTCAAAGCATACTCTAATCTC 59.532 44.000 0.00 0.00 0.00 2.75
5798 6174 6.287525 GCCTTCAAAGCATACTCTAATCTCT 58.712 40.000 0.00 0.00 0.00 3.10
5800 6176 7.928706 GCCTTCAAAGCATACTCTAATCTCTAA 59.071 37.037 0.00 0.00 0.00 2.10
5801 6177 9.995003 CCTTCAAAGCATACTCTAATCTCTAAT 57.005 33.333 0.00 0.00 0.00 1.73
5803 6179 8.824159 TCAAAGCATACTCTAATCTCTAATGC 57.176 34.615 0.00 0.00 38.76 3.56
5804 6180 8.424133 TCAAAGCATACTCTAATCTCTAATGCA 58.576 33.333 7.10 0.00 40.45 3.96
5805 6181 9.217278 CAAAGCATACTCTAATCTCTAATGCAT 57.783 33.333 0.00 0.00 40.45 3.96
5806 6182 8.774890 AAGCATACTCTAATCTCTAATGCATG 57.225 34.615 0.00 0.00 40.45 4.06
5807 6183 6.817641 AGCATACTCTAATCTCTAATGCATGC 59.182 38.462 11.82 11.82 40.45 4.06
5810 6186 5.922053 ACTCTAATCTCTAATGCATGCACA 58.078 37.500 25.37 13.23 0.00 4.57
5811 6187 5.990386 ACTCTAATCTCTAATGCATGCACAG 59.010 40.000 25.37 22.23 0.00 3.66
5813 6189 3.572632 ATCTCTAATGCATGCACAGGT 57.427 42.857 25.37 10.09 0.00 4.00
5814 6190 3.354948 TCTCTAATGCATGCACAGGTT 57.645 42.857 25.37 15.99 0.00 3.50
5815 6191 3.689347 TCTCTAATGCATGCACAGGTTT 58.311 40.909 25.37 15.59 0.00 3.27
5817 6193 4.523943 TCTCTAATGCATGCACAGGTTTTT 59.476 37.500 25.37 14.04 0.00 1.94
5925 6322 7.905265 CAGATAGTGGACATATCTTCAGGAAT 58.095 38.462 0.00 0.00 37.79 3.01
5969 6366 9.284968 AGCAATACAAGTTGTACTAACTGAAAT 57.715 29.630 17.79 0.00 35.42 2.17
5981 6378 9.591792 TGTACTAACTGAAATGATGATCTTCTG 57.408 33.333 9.75 4.11 0.00 3.02
6042 6439 3.067833 GTCTGCAGTTAGTCTGAAACCC 58.932 50.000 14.67 0.00 46.27 4.11
6063 6460 4.093998 CCCTCGACATGTTTTCTGATTCAG 59.906 45.833 7.38 7.38 0.00 3.02
6067 6464 7.351414 TCGACATGTTTTCTGATTCAGTTAG 57.649 36.000 13.23 1.70 32.61 2.34
6069 6466 6.128445 CGACATGTTTTCTGATTCAGTTAGCT 60.128 38.462 13.23 0.00 32.61 3.32
6109 6507 3.874383 TCAATCTGGGTTTGTCCTCAA 57.126 42.857 0.00 0.00 36.25 3.02
6161 6559 3.261580 CACACATTTCCTCACGCTATCA 58.738 45.455 0.00 0.00 0.00 2.15
6179 6577 8.939929 ACGCTATCATAGTGATAAAAATGATGG 58.060 33.333 12.37 5.33 38.72 3.51
6183 6581 8.660295 ATCATAGTGATAAAAATGATGGGCAT 57.340 30.769 0.00 0.00 37.61 4.40
6192 6590 6.956202 AAAAATGATGGGCATGAAACAAAA 57.044 29.167 0.00 0.00 37.28 2.44
6193 6591 5.945466 AAATGATGGGCATGAAACAAAAC 57.055 34.783 0.00 0.00 37.28 2.43
6194 6592 4.620589 ATGATGGGCATGAAACAAAACA 57.379 36.364 0.00 0.00 35.42 2.83
6196 6594 4.970711 TGATGGGCATGAAACAAAACATT 58.029 34.783 0.00 0.00 0.00 2.71
6198 6596 5.238868 TGATGGGCATGAAACAAAACATTTG 59.761 36.000 0.00 1.47 0.00 2.32
6212 6658 6.646240 ACAAAACATTTGTCCATGTGCTATTC 59.354 34.615 2.76 0.00 37.46 1.75
6225 6671 2.006888 TGCTATTCGCACTTAAGCACC 58.993 47.619 1.29 0.00 45.47 5.01
6228 6674 2.373540 ATTCGCACTTAAGCACCGTA 57.626 45.000 1.29 0.00 0.00 4.02
6233 6679 2.158841 CGCACTTAAGCACCGTAAACAT 59.841 45.455 1.29 0.00 0.00 2.71
6237 6683 4.212425 CACTTAAGCACCGTAAACATCACA 59.788 41.667 1.29 0.00 0.00 3.58
6240 6686 1.999735 AGCACCGTAAACATCACATCG 59.000 47.619 0.00 0.00 0.00 3.84
6251 6697 9.129209 CGTAAACATCACATCGTCTTATCATAT 57.871 33.333 0.00 0.00 0.00 1.78
6253 6699 8.893219 AAACATCACATCGTCTTATCATATGT 57.107 30.769 1.90 0.00 0.00 2.29
6255 6701 7.093354 ACATCACATCGTCTTATCATATGTCC 58.907 38.462 1.90 0.00 0.00 4.02
6256 6702 6.901081 TCACATCGTCTTATCATATGTCCT 57.099 37.500 1.90 0.00 0.00 3.85
6257 6703 6.914259 TCACATCGTCTTATCATATGTCCTC 58.086 40.000 1.90 0.00 0.00 3.71
6258 6704 6.490040 TCACATCGTCTTATCATATGTCCTCA 59.510 38.462 1.90 0.00 0.00 3.86
6260 6706 7.653311 CACATCGTCTTATCATATGTCCTCAAA 59.347 37.037 1.90 0.00 0.00 2.69
6261 6707 8.204160 ACATCGTCTTATCATATGTCCTCAAAA 58.796 33.333 1.90 0.00 0.00 2.44
6262 6708 8.491152 CATCGTCTTATCATATGTCCTCAAAAC 58.509 37.037 1.90 0.00 0.00 2.43
6265 6711 9.476202 CGTCTTATCATATGTCCTCAAAACATA 57.524 33.333 1.90 0.00 42.20 2.29
6272 6718 3.669536 TGTCCTCAAAACATATGCGTCA 58.330 40.909 1.58 0.00 0.00 4.35
6273 6719 3.435327 TGTCCTCAAAACATATGCGTCAC 59.565 43.478 1.58 0.00 0.00 3.67
6275 6721 3.435327 TCCTCAAAACATATGCGTCACAC 59.565 43.478 1.58 0.00 0.00 3.82
6278 6837 3.188254 TCAAAACATATGCGTCACACCAG 59.812 43.478 1.58 0.00 0.00 4.00
6370 6929 0.247736 CCTCTCACCAGTCGGGAAAG 59.752 60.000 0.00 0.00 41.15 2.62
6388 6947 4.396478 GGAAAGTAAGGTCAATCTGCCTTC 59.604 45.833 0.00 0.00 43.40 3.46
6396 6955 3.366679 GGTCAATCTGCCTTCACAATGTG 60.367 47.826 7.12 7.12 34.45 3.21
6411 6981 6.571605 TCACAATGTGAGAAGAAAAATGCAA 58.428 32.000 12.63 0.00 37.67 4.08
6419 6989 9.248291 TGTGAGAAGAAAAATGCAAAAATCTAC 57.752 29.630 0.00 0.00 0.00 2.59
6517 7087 2.673368 CCTTTTCGATCTTCGGAACCTG 59.327 50.000 0.00 0.00 37.05 4.00
6521 7091 3.984508 TCGATCTTCGGAACCTGTATC 57.015 47.619 0.00 0.00 40.88 2.24
6524 7094 3.551046 CGATCTTCGGAACCTGTATCAGG 60.551 52.174 13.43 13.43 45.65 3.86
6559 7129 4.737855 GTGAGGTACCAAGAGAAGCATA 57.262 45.455 15.94 0.00 0.00 3.14
6572 7142 7.337942 CCAAGAGAAGCATAGTAACCAAGAAAT 59.662 37.037 0.00 0.00 0.00 2.17
6573 7143 7.856145 AGAGAAGCATAGTAACCAAGAAATG 57.144 36.000 0.00 0.00 0.00 2.32
6583 7153 7.736447 AGTAACCAAGAAATGAAACTCTGAG 57.264 36.000 2.45 2.45 0.00 3.35
6650 7220 4.012374 CACACAATATCCCTGAAACAGCT 58.988 43.478 0.00 0.00 0.00 4.24
6653 7223 5.185454 CACAATATCCCTGAAACAGCTACA 58.815 41.667 0.00 0.00 0.00 2.74
6737 7307 5.453266 CAGTATATTTGCAGCAACAATGTCG 59.547 40.000 7.54 0.00 0.00 4.35
6795 7365 3.015327 CCAGGCTTTTCCTCTTCTGATG 58.985 50.000 0.00 0.00 45.52 3.07
6796 7366 3.307975 CCAGGCTTTTCCTCTTCTGATGA 60.308 47.826 0.00 0.00 45.52 2.92
6797 7367 4.525024 CAGGCTTTTCCTCTTCTGATGAT 58.475 43.478 0.00 0.00 45.52 2.45
6809 7379 4.807834 TCTTCTGATGATTTGTCGATGCTC 59.192 41.667 0.00 0.00 0.00 4.26
6897 7467 1.736126 CGTTCAGCAGCATGTTCTCAT 59.264 47.619 0.00 0.00 39.31 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.857217 CGAATCGAGATTGGAGCACAG 59.143 52.381 0.00 0.00 0.00 3.66
70 71 2.508716 ACAGCAAGTCATGATCTCCCAT 59.491 45.455 0.00 0.00 0.00 4.00
270 271 5.397360 TCCATAGGTGCTCAATCAGATCTA 58.603 41.667 0.00 0.00 0.00 1.98
436 437 3.000322 GTGTCTCGGCGTTCAATTATCAG 60.000 47.826 6.85 0.00 0.00 2.90
473 474 3.073274 GGCGAGAATAGGCCCATATTT 57.927 47.619 0.00 0.00 43.64 1.40
621 623 0.250124 CGCATACAAATCGCCCCCTA 60.250 55.000 0.00 0.00 0.00 3.53
676 680 2.034812 CCTAGATAGCACACGTTCCCTC 59.965 54.545 0.00 0.00 0.00 4.30
677 681 2.032620 CCTAGATAGCACACGTTCCCT 58.967 52.381 0.00 0.00 0.00 4.20
678 682 1.755380 ACCTAGATAGCACACGTTCCC 59.245 52.381 0.00 0.00 0.00 3.97
679 683 3.187700 CAACCTAGATAGCACACGTTCC 58.812 50.000 0.00 0.00 0.00 3.62
680 684 3.846360 ACAACCTAGATAGCACACGTTC 58.154 45.455 0.00 0.00 0.00 3.95
681 685 3.955650 ACAACCTAGATAGCACACGTT 57.044 42.857 0.00 0.00 0.00 3.99
682 686 3.955650 AACAACCTAGATAGCACACGT 57.044 42.857 0.00 0.00 0.00 4.49
683 687 6.903883 ATAAAACAACCTAGATAGCACACG 57.096 37.500 0.00 0.00 0.00 4.49
684 688 8.040716 ACAATAAAACAACCTAGATAGCACAC 57.959 34.615 0.00 0.00 0.00 3.82
685 689 8.630054 AACAATAAAACAACCTAGATAGCACA 57.370 30.769 0.00 0.00 0.00 4.57
686 690 9.341899 CAAACAATAAAACAACCTAGATAGCAC 57.658 33.333 0.00 0.00 0.00 4.40
687 691 8.519526 CCAAACAATAAAACAACCTAGATAGCA 58.480 33.333 0.00 0.00 0.00 3.49
688 692 7.488150 GCCAAACAATAAAACAACCTAGATAGC 59.512 37.037 0.00 0.00 0.00 2.97
689 693 8.739972 AGCCAAACAATAAAACAACCTAGATAG 58.260 33.333 0.00 0.00 0.00 2.08
690 694 8.644374 AGCCAAACAATAAAACAACCTAGATA 57.356 30.769 0.00 0.00 0.00 1.98
691 695 7.539034 AGCCAAACAATAAAACAACCTAGAT 57.461 32.000 0.00 0.00 0.00 1.98
692 696 6.969993 AGCCAAACAATAAAACAACCTAGA 57.030 33.333 0.00 0.00 0.00 2.43
693 697 7.882179 AGTAGCCAAACAATAAAACAACCTAG 58.118 34.615 0.00 0.00 0.00 3.02
694 698 7.502895 TGAGTAGCCAAACAATAAAACAACCTA 59.497 33.333 0.00 0.00 0.00 3.08
695 699 6.322712 TGAGTAGCCAAACAATAAAACAACCT 59.677 34.615 0.00 0.00 0.00 3.50
696 700 6.508777 TGAGTAGCCAAACAATAAAACAACC 58.491 36.000 0.00 0.00 0.00 3.77
697 701 7.200455 ACTGAGTAGCCAAACAATAAAACAAC 58.800 34.615 0.00 0.00 0.00 3.32
698 702 7.341445 ACTGAGTAGCCAAACAATAAAACAA 57.659 32.000 0.00 0.00 0.00 2.83
699 703 6.952773 ACTGAGTAGCCAAACAATAAAACA 57.047 33.333 0.00 0.00 0.00 2.83
700 704 8.095937 AGTACTGAGTAGCCAAACAATAAAAC 57.904 34.615 0.00 0.00 0.00 2.43
701 705 7.934665 TGAGTACTGAGTAGCCAAACAATAAAA 59.065 33.333 0.00 0.00 0.00 1.52
702 706 7.446769 TGAGTACTGAGTAGCCAAACAATAAA 58.553 34.615 0.00 0.00 0.00 1.40
703 707 6.999950 TGAGTACTGAGTAGCCAAACAATAA 58.000 36.000 0.00 0.00 0.00 1.40
704 708 6.599356 TGAGTACTGAGTAGCCAAACAATA 57.401 37.500 0.00 0.00 0.00 1.90
705 709 5.483685 TGAGTACTGAGTAGCCAAACAAT 57.516 39.130 0.00 0.00 0.00 2.71
706 710 4.948341 TGAGTACTGAGTAGCCAAACAA 57.052 40.909 0.00 0.00 0.00 2.83
707 711 6.791867 ATATGAGTACTGAGTAGCCAAACA 57.208 37.500 0.00 0.00 0.00 2.83
708 712 7.942990 AGTATATGAGTACTGAGTAGCCAAAC 58.057 38.462 0.00 0.00 33.78 2.93
709 713 8.534954 AAGTATATGAGTACTGAGTAGCCAAA 57.465 34.615 0.00 0.00 35.20 3.28
710 714 7.778382 TGAAGTATATGAGTACTGAGTAGCCAA 59.222 37.037 0.00 0.00 35.20 4.52
711 715 7.287810 TGAAGTATATGAGTACTGAGTAGCCA 58.712 38.462 0.00 0.00 35.20 4.75
712 716 7.747155 TGAAGTATATGAGTACTGAGTAGCC 57.253 40.000 0.00 0.00 35.20 3.93
713 717 8.455682 GGATGAAGTATATGAGTACTGAGTAGC 58.544 40.741 0.00 0.00 35.20 3.58
714 718 8.661257 CGGATGAAGTATATGAGTACTGAGTAG 58.339 40.741 0.00 0.00 35.20 2.57
715 719 8.155510 ACGGATGAAGTATATGAGTACTGAGTA 58.844 37.037 0.00 0.00 35.20 2.59
716 720 6.999272 ACGGATGAAGTATATGAGTACTGAGT 59.001 38.462 0.00 0.00 35.20 3.41
717 721 7.441890 ACGGATGAAGTATATGAGTACTGAG 57.558 40.000 0.00 0.00 35.20 3.35
718 722 7.040617 GGAACGGATGAAGTATATGAGTACTGA 60.041 40.741 0.00 0.00 35.20 3.41
719 723 7.040340 AGGAACGGATGAAGTATATGAGTACTG 60.040 40.741 0.00 0.00 35.20 2.74
720 724 7.005296 AGGAACGGATGAAGTATATGAGTACT 58.995 38.462 0.00 0.00 36.50 2.73
721 725 7.216973 AGGAACGGATGAAGTATATGAGTAC 57.783 40.000 0.00 0.00 0.00 2.73
722 726 8.929260 TTAGGAACGGATGAAGTATATGAGTA 57.071 34.615 0.00 0.00 0.00 2.59
723 727 7.506261 ACTTAGGAACGGATGAAGTATATGAGT 59.494 37.037 0.00 0.00 0.00 3.41
724 728 7.887381 ACTTAGGAACGGATGAAGTATATGAG 58.113 38.462 0.00 0.00 0.00 2.90
725 729 7.834881 ACTTAGGAACGGATGAAGTATATGA 57.165 36.000 0.00 0.00 0.00 2.15
728 732 9.976511 CAAATACTTAGGAACGGATGAAGTATA 57.023 33.333 6.13 0.00 40.64 1.47
729 733 8.483758 ACAAATACTTAGGAACGGATGAAGTAT 58.516 33.333 0.00 0.00 42.37 2.12
730 734 7.762615 CACAAATACTTAGGAACGGATGAAGTA 59.237 37.037 0.00 0.00 37.11 2.24
731 735 6.594159 CACAAATACTTAGGAACGGATGAAGT 59.406 38.462 0.00 0.00 34.78 3.01
732 736 6.594159 ACACAAATACTTAGGAACGGATGAAG 59.406 38.462 0.00 0.00 0.00 3.02
733 737 6.469410 ACACAAATACTTAGGAACGGATGAA 58.531 36.000 0.00 0.00 0.00 2.57
734 738 6.045072 ACACAAATACTTAGGAACGGATGA 57.955 37.500 0.00 0.00 0.00 2.92
735 739 6.737254 AACACAAATACTTAGGAACGGATG 57.263 37.500 0.00 0.00 0.00 3.51
737 741 9.590451 CTATAAACACAAATACTTAGGAACGGA 57.410 33.333 0.00 0.00 0.00 4.69
738 742 9.590451 TCTATAAACACAAATACTTAGGAACGG 57.410 33.333 0.00 0.00 0.00 4.44
786 790 9.950496 AGTGTAGATTCACTCATTTTACTTCAT 57.050 29.630 0.00 0.00 44.07 2.57
851 855 9.640963 TCCGTTTGTCTTTTTAGAAATTTGAAA 57.359 25.926 0.00 0.00 0.00 2.69
852 856 9.296400 CTCCGTTTGTCTTTTTAGAAATTTGAA 57.704 29.630 0.00 0.00 0.00 2.69
853 857 7.918562 CCTCCGTTTGTCTTTTTAGAAATTTGA 59.081 33.333 0.00 0.00 0.00 2.69
854 858 7.169140 CCCTCCGTTTGTCTTTTTAGAAATTTG 59.831 37.037 0.00 0.00 0.00 2.32
855 859 7.068962 TCCCTCCGTTTGTCTTTTTAGAAATTT 59.931 33.333 0.00 0.00 0.00 1.82
856 860 6.548251 TCCCTCCGTTTGTCTTTTTAGAAATT 59.452 34.615 0.00 0.00 0.00 1.82
857 861 6.066032 TCCCTCCGTTTGTCTTTTTAGAAAT 58.934 36.000 0.00 0.00 0.00 2.17
858 862 5.438833 TCCCTCCGTTTGTCTTTTTAGAAA 58.561 37.500 0.00 0.00 0.00 2.52
859 863 5.038651 TCCCTCCGTTTGTCTTTTTAGAA 57.961 39.130 0.00 0.00 0.00 2.10
860 864 4.102054 ACTCCCTCCGTTTGTCTTTTTAGA 59.898 41.667 0.00 0.00 0.00 2.10
861 865 4.386711 ACTCCCTCCGTTTGTCTTTTTAG 58.613 43.478 0.00 0.00 0.00 1.85
862 866 4.426736 ACTCCCTCCGTTTGTCTTTTTA 57.573 40.909 0.00 0.00 0.00 1.52
863 867 3.292492 ACTCCCTCCGTTTGTCTTTTT 57.708 42.857 0.00 0.00 0.00 1.94
864 868 3.390311 ACTACTCCCTCCGTTTGTCTTTT 59.610 43.478 0.00 0.00 0.00 2.27
865 869 2.970640 ACTACTCCCTCCGTTTGTCTTT 59.029 45.455 0.00 0.00 0.00 2.52
866 870 2.606378 ACTACTCCCTCCGTTTGTCTT 58.394 47.619 0.00 0.00 0.00 3.01
867 871 2.305858 ACTACTCCCTCCGTTTGTCT 57.694 50.000 0.00 0.00 0.00 3.41
868 872 3.087781 AGTACTACTCCCTCCGTTTGTC 58.912 50.000 0.00 0.00 0.00 3.18
869 873 3.166560 AGTACTACTCCCTCCGTTTGT 57.833 47.619 0.00 0.00 0.00 2.83
870 874 5.649782 TTAAGTACTACTCCCTCCGTTTG 57.350 43.478 0.00 0.00 0.00 2.93
871 875 6.864151 ATTTAAGTACTACTCCCTCCGTTT 57.136 37.500 0.00 0.00 0.00 3.60
872 876 6.891908 TGTATTTAAGTACTACTCCCTCCGTT 59.108 38.462 9.27 0.00 0.00 4.44
873 877 6.426587 TGTATTTAAGTACTACTCCCTCCGT 58.573 40.000 9.27 0.00 0.00 4.69
874 878 6.949352 TGTATTTAAGTACTACTCCCTCCG 57.051 41.667 9.27 0.00 0.00 4.63
875 879 8.303780 ACTTGTATTTAAGTACTACTCCCTCC 57.696 38.462 9.27 0.00 39.03 4.30
876 880 8.127954 CGACTTGTATTTAAGTACTACTCCCTC 58.872 40.741 9.27 0.00 40.78 4.30
877 881 7.831193 TCGACTTGTATTTAAGTACTACTCCCT 59.169 37.037 9.27 0.00 40.78 4.20
878 882 7.989826 TCGACTTGTATTTAAGTACTACTCCC 58.010 38.462 9.27 0.00 40.78 4.30
883 887 9.577110 CCACATTCGACTTGTATTTAAGTACTA 57.423 33.333 9.27 1.59 40.78 1.82
884 888 7.064253 GCCACATTCGACTTGTATTTAAGTACT 59.936 37.037 9.27 0.00 40.78 2.73
885 889 7.064253 AGCCACATTCGACTTGTATTTAAGTAC 59.936 37.037 1.35 1.35 40.78 2.73
886 890 7.101054 AGCCACATTCGACTTGTATTTAAGTA 58.899 34.615 0.16 0.00 40.78 2.24
887 891 5.938125 AGCCACATTCGACTTGTATTTAAGT 59.062 36.000 0.16 0.00 43.24 2.24
888 892 6.422776 AGCCACATTCGACTTGTATTTAAG 57.577 37.500 0.16 0.00 0.00 1.85
889 893 7.011950 CCATAGCCACATTCGACTTGTATTTAA 59.988 37.037 0.16 0.00 0.00 1.52
890 894 6.481976 CCATAGCCACATTCGACTTGTATTTA 59.518 38.462 0.16 0.00 0.00 1.40
891 895 5.296780 CCATAGCCACATTCGACTTGTATTT 59.703 40.000 0.16 0.00 0.00 1.40
892 896 4.816385 CCATAGCCACATTCGACTTGTATT 59.184 41.667 0.16 0.00 0.00 1.89
893 897 4.100963 TCCATAGCCACATTCGACTTGTAT 59.899 41.667 0.16 0.00 0.00 2.29
894 898 3.449377 TCCATAGCCACATTCGACTTGTA 59.551 43.478 0.16 0.00 0.00 2.41
895 899 2.236146 TCCATAGCCACATTCGACTTGT 59.764 45.455 0.00 0.00 0.00 3.16
896 900 2.905075 TCCATAGCCACATTCGACTTG 58.095 47.619 0.00 0.00 0.00 3.16
897 901 3.470709 CATCCATAGCCACATTCGACTT 58.529 45.455 0.00 0.00 0.00 3.01
898 902 2.808202 GCATCCATAGCCACATTCGACT 60.808 50.000 0.00 0.00 0.00 4.18
899 903 1.532868 GCATCCATAGCCACATTCGAC 59.467 52.381 0.00 0.00 0.00 4.20
900 904 1.140652 TGCATCCATAGCCACATTCGA 59.859 47.619 0.00 0.00 0.00 3.71
901 905 1.265095 GTGCATCCATAGCCACATTCG 59.735 52.381 0.00 0.00 0.00 3.34
902 906 2.292569 CTGTGCATCCATAGCCACATTC 59.707 50.000 0.00 0.00 0.00 2.67
903 907 2.304092 CTGTGCATCCATAGCCACATT 58.696 47.619 0.00 0.00 0.00 2.71
904 908 1.213678 ACTGTGCATCCATAGCCACAT 59.786 47.619 0.00 0.00 33.90 3.21
905 909 0.620030 ACTGTGCATCCATAGCCACA 59.380 50.000 0.00 0.00 33.90 4.17
906 910 1.672881 GAACTGTGCATCCATAGCCAC 59.327 52.381 0.00 0.00 33.90 5.01
907 911 1.743431 CGAACTGTGCATCCATAGCCA 60.743 52.381 0.00 0.00 33.90 4.75
908 912 0.940126 CGAACTGTGCATCCATAGCC 59.060 55.000 0.00 0.00 33.90 3.93
909 913 1.656652 ACGAACTGTGCATCCATAGC 58.343 50.000 0.00 0.00 33.90 2.97
910 914 4.685169 AAAACGAACTGTGCATCCATAG 57.315 40.909 0.00 0.00 36.39 2.23
911 915 5.106475 GGTTAAAACGAACTGTGCATCCATA 60.106 40.000 0.00 0.00 0.00 2.74
912 916 4.320935 GGTTAAAACGAACTGTGCATCCAT 60.321 41.667 0.00 0.00 0.00 3.41
913 917 3.003897 GGTTAAAACGAACTGTGCATCCA 59.996 43.478 0.00 0.00 0.00 3.41
914 918 3.561503 GGTTAAAACGAACTGTGCATCC 58.438 45.455 0.00 0.00 0.00 3.51
915 919 3.561503 GGGTTAAAACGAACTGTGCATC 58.438 45.455 0.00 0.00 0.00 3.91
916 920 2.031508 CGGGTTAAAACGAACTGTGCAT 60.032 45.455 0.00 0.00 0.00 3.96
917 921 1.331138 CGGGTTAAAACGAACTGTGCA 59.669 47.619 0.00 0.00 0.00 4.57
918 922 1.922880 GCGGGTTAAAACGAACTGTGC 60.923 52.381 4.43 0.00 0.00 4.57
919 923 1.600485 AGCGGGTTAAAACGAACTGTG 59.400 47.619 4.43 0.00 0.00 3.66
920 924 1.957668 AGCGGGTTAAAACGAACTGT 58.042 45.000 4.43 0.00 0.00 3.55
921 925 3.364267 GGTAAGCGGGTTAAAACGAACTG 60.364 47.826 0.55 0.00 0.00 3.16
922 926 2.807967 GGTAAGCGGGTTAAAACGAACT 59.192 45.455 0.55 0.00 0.00 3.01
923 927 2.547634 TGGTAAGCGGGTTAAAACGAAC 59.452 45.455 0.55 0.00 0.00 3.95
924 928 2.807392 CTGGTAAGCGGGTTAAAACGAA 59.193 45.455 0.55 0.00 0.00 3.85
925 929 2.415776 CTGGTAAGCGGGTTAAAACGA 58.584 47.619 0.55 0.00 0.00 3.85
926 930 1.135888 GCTGGTAAGCGGGTTAAAACG 60.136 52.381 0.55 0.00 40.27 3.60
927 931 2.624316 GCTGGTAAGCGGGTTAAAAC 57.376 50.000 0.55 0.00 40.27 2.43
948 952 0.450983 CGACGACTACCAGGAACTCC 59.549 60.000 0.00 0.00 34.60 3.85
949 953 1.163554 ACGACGACTACCAGGAACTC 58.836 55.000 0.00 0.00 34.60 3.01
950 954 1.613836 AACGACGACTACCAGGAACT 58.386 50.000 0.00 0.00 43.88 3.01
951 955 2.485814 ACTAACGACGACTACCAGGAAC 59.514 50.000 0.00 0.00 0.00 3.62
952 956 2.744202 GACTAACGACGACTACCAGGAA 59.256 50.000 0.00 0.00 0.00 3.36
953 957 2.350522 GACTAACGACGACTACCAGGA 58.649 52.381 0.00 0.00 0.00 3.86
954 958 1.399791 GGACTAACGACGACTACCAGG 59.600 57.143 0.00 0.00 0.00 4.45
955 959 2.079158 TGGACTAACGACGACTACCAG 58.921 52.381 0.00 0.00 0.00 4.00
956 960 2.079158 CTGGACTAACGACGACTACCA 58.921 52.381 0.00 3.80 0.00 3.25
957 961 2.079925 ACTGGACTAACGACGACTACC 58.920 52.381 0.00 0.00 0.00 3.18
958 962 2.095053 GGACTGGACTAACGACGACTAC 59.905 54.545 0.00 0.00 0.00 2.73
959 963 2.289631 TGGACTGGACTAACGACGACTA 60.290 50.000 0.00 0.00 0.00 2.59
960 964 1.163554 GGACTGGACTAACGACGACT 58.836 55.000 0.00 0.00 0.00 4.18
961 965 0.877071 TGGACTGGACTAACGACGAC 59.123 55.000 0.00 0.00 0.00 4.34
962 966 1.162698 CTGGACTGGACTAACGACGA 58.837 55.000 0.00 0.00 0.00 4.20
963 967 0.879765 ACTGGACTGGACTAACGACG 59.120 55.000 0.00 0.00 0.00 5.12
964 968 2.352519 GGAACTGGACTGGACTAACGAC 60.353 54.545 0.00 0.00 0.00 4.34
965 969 1.891150 GGAACTGGACTGGACTAACGA 59.109 52.381 0.00 0.00 0.00 3.85
966 970 1.067071 GGGAACTGGACTGGACTAACG 60.067 57.143 0.00 0.00 0.00 3.18
967 971 1.278413 GGGGAACTGGACTGGACTAAC 59.722 57.143 0.00 0.00 0.00 2.34
968 972 1.652947 GGGGAACTGGACTGGACTAA 58.347 55.000 0.00 0.00 0.00 2.24
969 973 0.252558 GGGGGAACTGGACTGGACTA 60.253 60.000 0.00 0.00 0.00 2.59
970 974 1.539124 GGGGGAACTGGACTGGACT 60.539 63.158 0.00 0.00 0.00 3.85
971 975 1.846124 TGGGGGAACTGGACTGGAC 60.846 63.158 0.00 0.00 0.00 4.02
972 976 1.846124 GTGGGGGAACTGGACTGGA 60.846 63.158 0.00 0.00 0.00 3.86
973 977 1.427072 AAGTGGGGGAACTGGACTGG 61.427 60.000 0.00 0.00 0.00 4.00
974 978 0.036875 GAAGTGGGGGAACTGGACTG 59.963 60.000 0.00 0.00 0.00 3.51
975 979 0.401395 TGAAGTGGGGGAACTGGACT 60.401 55.000 0.00 0.00 0.00 3.85
976 980 0.476771 TTGAAGTGGGGGAACTGGAC 59.523 55.000 0.00 0.00 0.00 4.02
977 981 0.476771 GTTGAAGTGGGGGAACTGGA 59.523 55.000 0.00 0.00 0.00 3.86
978 982 0.539669 GGTTGAAGTGGGGGAACTGG 60.540 60.000 0.00 0.00 0.00 4.00
979 983 0.184933 TGGTTGAAGTGGGGGAACTG 59.815 55.000 0.00 0.00 0.00 3.16
980 984 0.478507 CTGGTTGAAGTGGGGGAACT 59.521 55.000 0.00 0.00 0.00 3.01
981 985 1.179174 GCTGGTTGAAGTGGGGGAAC 61.179 60.000 0.00 0.00 0.00 3.62
982 986 1.152830 GCTGGTTGAAGTGGGGGAA 59.847 57.895 0.00 0.00 0.00 3.97
983 987 1.650242 TTGCTGGTTGAAGTGGGGGA 61.650 55.000 0.00 0.00 0.00 4.81
984 988 0.758685 TTTGCTGGTTGAAGTGGGGG 60.759 55.000 0.00 0.00 0.00 5.40
985 989 0.389025 GTTTGCTGGTTGAAGTGGGG 59.611 55.000 0.00 0.00 0.00 4.96
986 990 1.110442 TGTTTGCTGGTTGAAGTGGG 58.890 50.000 0.00 0.00 0.00 4.61
987 991 2.957491 TTGTTTGCTGGTTGAAGTGG 57.043 45.000 0.00 0.00 0.00 4.00
988 992 3.848726 ACTTTGTTTGCTGGTTGAAGTG 58.151 40.909 0.00 0.00 0.00 3.16
989 993 4.535526 AACTTTGTTTGCTGGTTGAAGT 57.464 36.364 0.00 0.00 0.00 3.01
990 994 4.504097 GCTAACTTTGTTTGCTGGTTGAAG 59.496 41.667 8.99 0.00 0.00 3.02
991 995 4.429108 GCTAACTTTGTTTGCTGGTTGAA 58.571 39.130 8.99 0.00 0.00 2.69
992 996 3.488384 CGCTAACTTTGTTTGCTGGTTGA 60.488 43.478 12.98 0.00 0.00 3.18
993 997 2.788786 CGCTAACTTTGTTTGCTGGTTG 59.211 45.455 12.98 0.00 0.00 3.77
994 998 2.798145 GCGCTAACTTTGTTTGCTGGTT 60.798 45.455 0.00 0.00 0.00 3.67
995 999 1.269051 GCGCTAACTTTGTTTGCTGGT 60.269 47.619 0.00 0.00 0.00 4.00
996 1000 1.268999 TGCGCTAACTTTGTTTGCTGG 60.269 47.619 9.73 2.72 0.00 4.85
997 1001 2.118228 TGCGCTAACTTTGTTTGCTG 57.882 45.000 9.73 8.78 0.00 4.41
998 1002 2.861462 TTGCGCTAACTTTGTTTGCT 57.139 40.000 9.73 0.00 0.00 3.91
999 1003 3.916405 TTTTGCGCTAACTTTGTTTGC 57.084 38.095 9.73 6.76 0.00 3.68
1017 1021 4.744631 CACTGCGCTGACCTTTTTATTTTT 59.255 37.500 21.92 0.00 0.00 1.94
1018 1022 4.298332 CACTGCGCTGACCTTTTTATTTT 58.702 39.130 21.92 0.00 0.00 1.82
1019 1023 3.305335 CCACTGCGCTGACCTTTTTATTT 60.305 43.478 21.92 0.00 0.00 1.40
1020 1024 2.228822 CCACTGCGCTGACCTTTTTATT 59.771 45.455 21.92 0.00 0.00 1.40
1021 1025 1.812571 CCACTGCGCTGACCTTTTTAT 59.187 47.619 21.92 0.00 0.00 1.40
1022 1026 1.234821 CCACTGCGCTGACCTTTTTA 58.765 50.000 21.92 0.00 0.00 1.52
1023 1027 1.455383 CCCACTGCGCTGACCTTTTT 61.455 55.000 21.92 0.00 0.00 1.94
1024 1028 1.898574 CCCACTGCGCTGACCTTTT 60.899 57.895 21.92 0.00 0.00 2.27
1025 1029 2.281761 CCCACTGCGCTGACCTTT 60.282 61.111 21.92 0.00 0.00 3.11
1026 1030 3.241530 TCCCACTGCGCTGACCTT 61.242 61.111 21.92 0.00 0.00 3.50
1027 1031 3.699894 CTCCCACTGCGCTGACCT 61.700 66.667 21.92 0.00 0.00 3.85
1028 1032 3.695606 TCTCCCACTGCGCTGACC 61.696 66.667 21.92 0.00 0.00 4.02
1156 1161 7.969690 TGAGTAAGAGGAAGATGAAGAGAAT 57.030 36.000 0.00 0.00 0.00 2.40
1157 1162 7.782897 TTGAGTAAGAGGAAGATGAAGAGAA 57.217 36.000 0.00 0.00 0.00 2.87
1158 1163 7.069331 GGATTGAGTAAGAGGAAGATGAAGAGA 59.931 40.741 0.00 0.00 0.00 3.10
1176 1181 0.683504 AGCTCGGGTACGGATTGAGT 60.684 55.000 0.00 0.00 41.39 3.41
1182 1187 2.353610 GGGAAAGCTCGGGTACGGA 61.354 63.158 0.00 0.00 41.39 4.69
1307 1321 2.906354 CGAGGAAATTGAGGAATCGGT 58.094 47.619 0.00 0.00 0.00 4.69
1353 1367 3.020984 GACCTGGAACCAAACAAGTCAA 58.979 45.455 0.00 0.00 0.00 3.18
1356 1370 1.675552 CGACCTGGAACCAAACAAGT 58.324 50.000 0.00 0.00 0.00 3.16
1602 1625 1.285023 GCAACCAGCAAGTCAGCAG 59.715 57.895 0.00 0.00 44.79 4.24
1748 1772 2.477863 GCGGGATGCAAGTGTGAATAAC 60.478 50.000 0.00 0.00 45.45 1.89
1768 1792 3.491267 GCACTGAATAGATTACGGACTGC 59.509 47.826 0.00 0.00 0.00 4.40
1834 1858 1.266175 CACTTTGACAGCTTGGCAGAG 59.734 52.381 7.66 7.66 42.78 3.35
1903 1933 9.049523 CGAAGTCTTAATAACCCCCTAAAATAC 57.950 37.037 0.00 0.00 0.00 1.89
1910 1941 4.406972 GGTACGAAGTCTTAATAACCCCCT 59.593 45.833 0.00 0.00 43.93 4.79
1929 1960 7.201785 CCCATTACAATACTGTTCCATTGGTAC 60.202 40.741 5.56 5.56 36.63 3.34
1930 1961 6.831353 CCCATTACAATACTGTTCCATTGGTA 59.169 38.462 1.86 0.00 36.63 3.25
1939 1970 5.190925 TCCTACAGCCCATTACAATACTGTT 59.809 40.000 0.00 0.00 39.06 3.16
2066 2097 4.039124 GCCAGGAAAAGTTCAGGATTTCAA 59.961 41.667 0.00 0.00 35.32 2.69
2308 2344 1.648467 GGCAGACGCACTTCCCATTC 61.648 60.000 0.00 0.00 41.24 2.67
2322 2358 4.214310 TCCTTTCAGTGAAAAATGGCAGA 58.786 39.130 18.55 5.33 30.84 4.26
2370 2462 8.445275 TGTAATTATGTATGCCCACTTTGTAG 57.555 34.615 0.00 0.00 0.00 2.74
2401 2493 6.648879 ACTTAAAAACAGCTATTGCCTCAA 57.351 33.333 0.00 0.00 40.80 3.02
2402 2494 6.490040 AGAACTTAAAAACAGCTATTGCCTCA 59.510 34.615 0.00 0.00 40.80 3.86
2581 2674 1.494721 AGGGAAAACTGAGGTGCTGAA 59.505 47.619 0.00 0.00 0.00 3.02
2627 2720 7.359262 TGTTAACAAGGATAACACAGAATCG 57.641 36.000 5.64 0.00 38.10 3.34
2711 2804 8.845413 ATGAATAGATAACCTGCTTCTGATTC 57.155 34.615 0.00 0.00 0.00 2.52
2750 2843 4.907269 TCCATCACTATAAATCAGGGCAGA 59.093 41.667 0.00 0.00 0.00 4.26
2767 2860 5.758296 GCTGATAACGGTAAATCTTCCATCA 59.242 40.000 0.00 0.00 0.00 3.07
2803 2896 1.532868 GAGGATCCGGCATCAATTTCG 59.467 52.381 5.98 0.00 32.33 3.46
2843 2936 6.341316 GGTCAACAGACTCAGCATAGAAATA 58.659 40.000 0.00 0.00 32.81 1.40
2894 2987 5.592054 TGAGACTCCTAATACAGCAATTCG 58.408 41.667 0.00 0.00 0.00 3.34
2906 2999 4.098044 CGATGTTAAGGCTGAGACTCCTAA 59.902 45.833 0.00 0.00 31.24 2.69
2956 3049 4.872691 AGACGCTAAAGATCAGTGAAATGG 59.127 41.667 0.00 0.00 0.00 3.16
3056 3151 0.605319 GCTGTGGAATCGGTGGAACA 60.605 55.000 0.00 0.00 39.98 3.18
3192 3287 4.941263 AGCTGACTGAACTTACAAACACAA 59.059 37.500 0.00 0.00 0.00 3.33
3342 3514 3.003689 CAGTGAGGACGTGCAAAGAAAAT 59.996 43.478 10.52 0.00 0.00 1.82
3382 3555 7.559590 AGACATGCCTCAAACAGAATTATAC 57.440 36.000 0.00 0.00 0.00 1.47
3383 3556 7.442364 GCTAGACATGCCTCAAACAGAATTATA 59.558 37.037 0.00 0.00 0.00 0.98
3384 3557 6.261826 GCTAGACATGCCTCAAACAGAATTAT 59.738 38.462 0.00 0.00 0.00 1.28
3409 3584 6.446781 ACTGACAATGAATAAGCCTTCATG 57.553 37.500 7.34 0.00 43.37 3.07
3431 3610 4.315803 TGGCAGAAACTAGAACAGCTAAC 58.684 43.478 0.00 0.00 0.00 2.34
3459 3638 6.051717 AGTGGATAATAGCATGTGTGTCTTC 58.948 40.000 0.00 0.00 0.00 2.87
3461 3640 5.620738 AGTGGATAATAGCATGTGTGTCT 57.379 39.130 0.00 0.00 0.00 3.41
3462 3641 6.683974 AAAGTGGATAATAGCATGTGTGTC 57.316 37.500 0.00 0.00 0.00 3.67
3463 3642 8.752005 AATAAAGTGGATAATAGCATGTGTGT 57.248 30.769 0.00 0.00 0.00 3.72
3497 3759 9.129209 GACAATGCCTCTTGTTTTTAGAATAAC 57.871 33.333 0.00 0.00 39.40 1.89
3509 3771 5.591877 GGATAAATCTGACAATGCCTCTTGT 59.408 40.000 0.00 0.00 41.92 3.16
3510 3772 5.591472 TGGATAAATCTGACAATGCCTCTTG 59.409 40.000 0.00 0.00 0.00 3.02
3645 3907 8.670135 CCTAAAGAGATAGTGATATCTGTACCG 58.330 40.741 3.98 0.00 36.96 4.02
3764 4107 6.660521 TCTGTCTTAATGGCTTCATCAACATT 59.339 34.615 0.00 0.00 37.34 2.71
3768 4111 6.053632 TCTCTGTCTTAATGGCTTCATCAA 57.946 37.500 0.00 0.00 0.00 2.57
3863 4214 5.530171 AGCTGCCATGATGATACTTAAGTTG 59.470 40.000 14.49 3.84 0.00 3.16
3876 4227 3.623703 TGTAATCACAAGCTGCCATGAT 58.376 40.909 9.67 7.41 33.18 2.45
3877 4228 3.070476 TGTAATCACAAGCTGCCATGA 57.930 42.857 9.67 5.44 0.00 3.07
3882 4233 2.368439 TCCCATGTAATCACAAGCTGC 58.632 47.619 0.00 0.00 38.42 5.25
3996 4347 1.005687 TCCATGCCACATGATTCCACA 59.994 47.619 9.10 0.00 0.00 4.17
4159 4510 4.157289 AGCATTTGTCAGAACTAAGCCATG 59.843 41.667 0.00 0.00 0.00 3.66
4201 4552 3.059352 AGGTGAAGTTCTCCCAAATCG 57.941 47.619 18.25 0.00 30.62 3.34
4275 4626 5.221880 TGCTGTGACTGCAACAATTTATTC 58.778 37.500 14.85 0.00 35.52 1.75
4410 4761 2.028112 CACCACACTAGCACTACACCAT 60.028 50.000 0.00 0.00 0.00 3.55
4449 4800 2.309613 TGAAGCAAGGCAACATCAAGT 58.690 42.857 0.00 0.00 41.41 3.16
4481 4832 2.414058 TGCACAAAATTCAATCGCGT 57.586 40.000 5.77 0.00 0.00 6.01
4540 4891 5.065613 AGACCATGCCCAATAACATATGT 57.934 39.130 1.41 1.41 0.00 2.29
4549 4900 1.358787 TCCAAGAAGACCATGCCCAAT 59.641 47.619 0.00 0.00 0.00 3.16
4592 4949 8.129211 CGGAACTATTTTGGAAACTATGATTCC 58.871 37.037 0.00 0.00 45.39 3.01
4596 4953 7.162761 TGTCGGAACTATTTTGGAAACTATGA 58.837 34.615 0.00 0.00 0.00 2.15
4681 5040 4.083565 GACCTACAGCCAAATACCCAAAA 58.916 43.478 0.00 0.00 0.00 2.44
4983 5342 9.788960 GAATAGTACAAATCCACCAAAAGAATC 57.211 33.333 0.00 0.00 0.00 2.52
5031 5390 2.736670 AGGTGAAGCAGGAAAACACT 57.263 45.000 0.00 0.00 0.00 3.55
5078 5444 4.141937 TGCAAAGACAGTCTTACAGTCACT 60.142 41.667 16.46 0.00 37.13 3.41
5080 5446 4.371786 CTGCAAAGACAGTCTTACAGTCA 58.628 43.478 25.24 15.11 37.13 3.41
5118 5484 2.224992 TGTTGGGCCTTTGCTAGAATCA 60.225 45.455 4.53 0.00 37.74 2.57
5141 5507 4.400567 AGAAATAAGTGGCTGGAAATGAGC 59.599 41.667 0.00 0.00 35.57 4.26
5145 5511 6.012745 ACAGAAGAAATAAGTGGCTGGAAAT 58.987 36.000 0.00 0.00 0.00 2.17
5197 5563 0.618458 GAGGTATTGTGCTCCCACCA 59.382 55.000 0.00 0.00 41.35 4.17
5297 5663 2.832931 CTGGAAGGCTCAGTTGACG 58.167 57.895 0.00 0.00 0.00 4.35
5484 5850 2.442126 AGAACTCCGAAACTTTCCCCTT 59.558 45.455 0.00 0.00 0.00 3.95
5513 5879 3.949132 ACCTTCTTTCTGATTGGAGAGC 58.051 45.455 0.00 0.00 0.00 4.09
5517 5883 5.445069 TGTCAAACCTTCTTTCTGATTGGA 58.555 37.500 0.00 0.00 0.00 3.53
5643 6009 7.386851 TCTTTTCCTCTTTGTACTCCTATGTG 58.613 38.462 0.00 0.00 0.00 3.21
5687 6054 3.157087 CATTTTGGTGCTCAGGTTACCT 58.843 45.455 0.00 0.00 35.51 3.08
5692 6059 0.469705 TGCCATTTTGGTGCTCAGGT 60.470 50.000 0.00 0.00 40.46 4.00
5722 6089 3.747099 CAGGTTATCTGAACTTTGCCG 57.253 47.619 0.00 0.00 46.18 5.69
5735 6102 7.441458 GTGTAGAACTTTCAGTGTTCAGGTTAT 59.559 37.037 8.91 0.00 44.30 1.89
5770 6137 3.615155 AGAGTATGCTTTGAAGGCCTTC 58.385 45.455 34.48 34.48 39.91 3.46
5791 6167 5.039920 ACCTGTGCATGCATTAGAGATTA 57.960 39.130 25.64 0.00 0.00 1.75
5792 6168 3.894759 ACCTGTGCATGCATTAGAGATT 58.105 40.909 25.64 7.81 0.00 2.40
5794 6170 3.354948 AACCTGTGCATGCATTAGAGA 57.645 42.857 25.64 0.00 0.00 3.10
5795 6171 4.445452 AAAACCTGTGCATGCATTAGAG 57.555 40.909 25.64 18.78 0.00 2.43
5925 6322 5.692115 TTGCTTCCAGTATCCTCATACAA 57.308 39.130 0.00 0.00 37.89 2.41
5952 6349 9.950496 AAGATCATCATTTCAGTTAGTACAACT 57.050 29.630 0.00 0.19 0.00 3.16
5969 6366 2.356695 CGCAAATGGCAGAAGATCATCA 59.643 45.455 0.10 0.00 45.17 3.07
5973 6370 0.590732 CGCGCAAATGGCAGAAGATC 60.591 55.000 8.75 0.00 45.17 2.75
5981 6378 2.082366 CAACTCACGCGCAAATGGC 61.082 57.895 5.73 0.00 39.90 4.40
6042 6439 5.852738 ACTGAATCAGAAAACATGTCGAG 57.147 39.130 18.20 0.00 35.18 4.04
6082 6479 5.602145 AGGACAAACCCAGATTGATTTTCAA 59.398 36.000 0.00 0.00 39.06 2.69
6109 6507 7.134842 AGGATATCAAAATCCCAGATTGGTTT 58.865 34.615 4.83 0.00 45.74 3.27
6161 6559 8.481492 TTCATGCCCATCATTTTTATCACTAT 57.519 30.769 0.00 0.00 31.79 2.12
6179 6577 4.574013 TGGACAAATGTTTTGTTTCATGCC 59.426 37.500 7.03 3.89 31.96 4.40
6183 6581 5.064452 GCACATGGACAAATGTTTTGTTTCA 59.936 36.000 7.03 8.99 38.75 2.69
6192 6590 4.621068 CGAATAGCACATGGACAAATGT 57.379 40.909 0.00 0.00 41.50 2.71
6212 6658 1.527736 TGTTTACGGTGCTTAAGTGCG 59.472 47.619 4.02 0.00 35.36 5.34
6220 6666 1.999735 CGATGTGATGTTTACGGTGCT 59.000 47.619 0.00 0.00 0.00 4.40
6225 6671 6.806120 TGATAAGACGATGTGATGTTTACG 57.194 37.500 0.00 0.00 0.00 3.18
6228 6674 8.893219 ACATATGATAAGACGATGTGATGTTT 57.107 30.769 10.38 0.00 29.75 2.83
6233 6679 6.490040 TGAGGACATATGATAAGACGATGTGA 59.510 38.462 10.38 0.00 31.03 3.58
6237 6683 8.204160 TGTTTTGAGGACATATGATAAGACGAT 58.796 33.333 10.38 0.00 0.00 3.73
6251 6697 3.435327 GTGACGCATATGTTTTGAGGACA 59.565 43.478 4.29 0.00 0.00 4.02
6253 6699 3.435327 GTGTGACGCATATGTTTTGAGGA 59.565 43.478 4.29 0.00 0.00 3.71
6255 6701 3.188254 TGGTGTGACGCATATGTTTTGAG 59.812 43.478 4.29 0.00 0.00 3.02
6256 6702 3.142174 TGGTGTGACGCATATGTTTTGA 58.858 40.909 4.29 0.00 0.00 2.69
6257 6703 3.058293 ACTGGTGTGACGCATATGTTTTG 60.058 43.478 4.29 0.00 0.00 2.44
6258 6704 3.146066 ACTGGTGTGACGCATATGTTTT 58.854 40.909 4.29 0.00 0.00 2.43
6260 6706 2.472695 ACTGGTGTGACGCATATGTT 57.527 45.000 4.29 0.00 0.00 2.71
6261 6707 2.418197 GGTACTGGTGTGACGCATATGT 60.418 50.000 4.29 0.00 0.00 2.29
6262 6708 2.201732 GGTACTGGTGTGACGCATATG 58.798 52.381 0.00 0.00 0.00 1.78
6265 6711 1.295423 GGGTACTGGTGTGACGCAT 59.705 57.895 0.00 0.00 0.00 4.73
6267 6713 0.949105 CTTGGGTACTGGTGTGACGC 60.949 60.000 0.00 0.00 0.00 5.19
6268 6714 0.391597 ACTTGGGTACTGGTGTGACG 59.608 55.000 0.00 0.00 0.00 4.35
6270 6716 3.262405 GGATTACTTGGGTACTGGTGTGA 59.738 47.826 0.00 0.00 0.00 3.58
6272 6718 3.527937 AGGATTACTTGGGTACTGGTGT 58.472 45.455 0.00 0.00 0.00 4.16
6273 6719 4.141779 GGTAGGATTACTTGGGTACTGGTG 60.142 50.000 0.00 0.00 0.00 4.17
6275 6721 4.035112 TGGTAGGATTACTTGGGTACTGG 58.965 47.826 0.00 0.00 0.00 4.00
6278 6837 6.320418 CCATTTTGGTAGGATTACTTGGGTAC 59.680 42.308 0.00 0.00 31.35 3.34
6311 6870 4.218312 AGGAGAATGTTTTGGCTTCAACT 58.782 39.130 0.00 0.00 0.00 3.16
6315 6874 3.192212 CAGGAGGAGAATGTTTTGGCTTC 59.808 47.826 0.00 0.00 0.00 3.86
6317 6876 2.108952 ACAGGAGGAGAATGTTTTGGCT 59.891 45.455 0.00 0.00 0.00 4.75
6350 6909 0.471211 TTTCCCGACTGGTGAGAGGT 60.471 55.000 0.00 0.00 34.77 3.85
6354 6913 2.353803 CCTTACTTTCCCGACTGGTGAG 60.354 54.545 0.00 0.00 34.77 3.51
6370 6929 3.674997 TGTGAAGGCAGATTGACCTTAC 58.325 45.455 0.00 0.00 46.33 2.34
6388 6947 6.831727 TTGCATTTTTCTTCTCACATTGTG 57.168 33.333 10.64 10.64 34.45 3.33
6396 6955 7.327032 AGCGTAGATTTTTGCATTTTTCTTCTC 59.673 33.333 0.00 0.00 0.00 2.87
6411 6981 4.695928 GGGAACAAGAAGAGCGTAGATTTT 59.304 41.667 0.00 0.00 0.00 1.82
6419 6989 2.072298 CTTCAGGGAACAAGAAGAGCG 58.928 52.381 0.00 0.00 43.38 5.03
6517 7087 6.759272 TCACCAGTTATATCTTGCCTGATAC 58.241 40.000 0.00 0.00 32.51 2.24
6521 7091 4.141620 ACCTCACCAGTTATATCTTGCCTG 60.142 45.833 0.00 0.00 0.00 4.85
6559 7129 7.227512 CACTCAGAGTTTCATTTCTTGGTTACT 59.772 37.037 0.00 0.00 0.00 2.24
6572 7142 8.450578 AATTTAACATGTCACTCAGAGTTTCA 57.549 30.769 0.00 3.66 32.92 2.69
6573 7143 9.736023 AAAATTTAACATGTCACTCAGAGTTTC 57.264 29.630 0.00 0.00 32.92 2.78
6650 7220 1.868469 CGAAAACCGGTGGAACTGTA 58.132 50.000 8.52 0.00 43.33 2.74
6653 7223 0.748729 TTGCGAAAACCGGTGGAACT 60.749 50.000 8.52 0.00 39.04 3.01
6737 7307 3.828657 GTCCTCAAAGGGGACGTAC 57.171 57.895 0.00 0.00 42.84 3.67
6760 7330 0.678048 GCCTGGCAGTAACCTTGAGG 60.678 60.000 15.17 0.00 42.17 3.86
6795 7365 3.525537 TCTCAAGGAGCATCGACAAATC 58.474 45.455 0.00 0.00 34.37 2.17
6796 7366 3.616956 TCTCAAGGAGCATCGACAAAT 57.383 42.857 0.00 0.00 34.37 2.32
6797 7367 3.329386 CTTCTCAAGGAGCATCGACAAA 58.671 45.455 0.00 0.00 34.37 2.83
6809 7379 2.015587 GAGCCTTCATGCTTCTCAAGG 58.984 52.381 4.60 4.60 42.95 3.61
6838 7408 1.515521 GCTGGTTCACTTGGTTCCGG 61.516 60.000 0.00 0.00 0.00 5.14
6842 7412 2.624838 CAGAATGCTGGTTCACTTGGTT 59.375 45.455 0.00 0.00 38.51 3.67
6897 7467 1.824852 TCAAGCTGTAAGATCCGCTCA 59.175 47.619 0.00 0.00 34.07 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.