Multiple sequence alignment - TraesCS1B01G322700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G322700 chr1B 100.000 4956 0 0 1 4956 547588213 547583258 0.000000e+00 9153.0
1 TraesCS1B01G322700 chr1B 87.736 106 10 3 3317 3420 589055516 589055412 2.420000e-23 121.0
2 TraesCS1B01G322700 chr1A 91.846 1901 106 26 1447 3314 502831781 502829897 0.000000e+00 2606.0
3 TraesCS1B01G322700 chr1A 89.951 607 47 6 3538 4144 502829587 502828995 0.000000e+00 771.0
4 TraesCS1B01G322700 chr1A 86.508 630 53 13 143 745 502839733 502839109 0.000000e+00 664.0
5 TraesCS1B01G322700 chr1A 83.730 504 52 13 706 1205 502832259 502831782 2.720000e-122 449.0
6 TraesCS1B01G322700 chr1A 85.714 441 43 11 4276 4702 502828858 502828424 9.790000e-122 448.0
7 TraesCS1B01G322700 chr1A 91.760 267 10 4 4697 4956 502828243 502827982 1.310000e-95 361.0
8 TraesCS1B01G322700 chr1D 89.849 1793 113 29 1447 3221 407216616 407214875 0.000000e+00 2239.0
9 TraesCS1B01G322700 chr1D 90.156 1026 83 11 3422 4445 407214754 407213745 0.000000e+00 1319.0
10 TraesCS1B01G322700 chr1D 87.380 626 48 11 143 745 407217784 407217167 0.000000e+00 689.0
11 TraesCS1B01G322700 chr1D 84.127 504 55 13 705 1205 407217098 407216617 9.720000e-127 464.0
12 TraesCS1B01G322700 chr5D 81.549 607 107 3 1655 2258 71898886 71898282 3.450000e-136 496.0
13 TraesCS1B01G322700 chr5B 79.454 696 134 9 1570 2258 82464851 82465544 7.460000e-133 484.0
14 TraesCS1B01G322700 chr5B 87.069 116 13 2 3317 3430 501956954 501957069 4.030000e-26 130.0
15 TraesCS1B01G322700 chr5B 100.000 34 0 0 1 34 640646603 640646570 4.140000e-06 63.9
16 TraesCS1B01G322700 chr5A 79.801 604 119 3 1655 2256 64379890 64379288 2.120000e-118 436.0
17 TraesCS1B01G322700 chr5A 86.025 322 43 2 3676 3995 64375005 64374684 1.320000e-90 344.0
18 TraesCS1B01G322700 chr4B 100.000 103 0 0 1 103 649715276 649715174 1.820000e-44 191.0
19 TraesCS1B01G322700 chr4B 86.486 111 12 2 3317 3424 46193559 46193449 8.720000e-23 119.0
20 TraesCS1B01G322700 chr7A 98.058 103 2 0 1 103 145668987 145669089 3.940000e-41 180.0
21 TraesCS1B01G322700 chr7A 88.462 104 11 1 3318 3420 554392367 554392264 1.870000e-24 124.0
22 TraesCS1B01G322700 chr7A 86.667 105 13 1 3317 3420 663949560 663949664 1.130000e-21 115.0
23 TraesCS1B01G322700 chr3D 93.204 103 2 1 1 103 40785177 40785274 4.000000e-31 147.0
24 TraesCS1B01G322700 chr3D 87.288 118 14 1 4708 4824 527673021 527673138 3.110000e-27 134.0
25 TraesCS1B01G322700 chr7B 90.385 104 9 1 3318 3420 216938228 216938331 8.650000e-28 135.0
26 TraesCS1B01G322700 chr7B 87.736 106 10 3 3317 3420 513654310 513654206 2.420000e-23 121.0
27 TraesCS1B01G322700 chr7B 91.935 62 5 0 42 103 289284727 289284788 2.460000e-13 87.9
28 TraesCS1B01G322700 chr4D 88.073 109 11 2 3313 3420 509105458 509105351 1.450000e-25 128.0
29 TraesCS1B01G322700 chr7D 85.841 113 13 2 3317 3427 267124058 267124169 3.130000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G322700 chr1B 547583258 547588213 4955 True 9153.00 9153 100.0000 1 4956 1 chr1B.!!$R1 4955
1 TraesCS1B01G322700 chr1A 502827982 502832259 4277 True 927.00 2606 88.6002 706 4956 5 chr1A.!!$R2 4250
2 TraesCS1B01G322700 chr1A 502839109 502839733 624 True 664.00 664 86.5080 143 745 1 chr1A.!!$R1 602
3 TraesCS1B01G322700 chr1D 407213745 407217784 4039 True 1177.75 2239 87.8780 143 4445 4 chr1D.!!$R1 4302
4 TraesCS1B01G322700 chr5D 71898282 71898886 604 True 496.00 496 81.5490 1655 2258 1 chr5D.!!$R1 603
5 TraesCS1B01G322700 chr5B 82464851 82465544 693 False 484.00 484 79.4540 1570 2258 1 chr5B.!!$F1 688
6 TraesCS1B01G322700 chr5A 64379288 64379890 602 True 436.00 436 79.8010 1655 2256 1 chr5A.!!$R2 601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
674 694 0.033796 AGCCACCATATGCAAGCTGT 60.034 50.0 9.88 0.0 0.00 4.40 F
1724 1869 0.250901 ATGCATATCCCGGCACCTTC 60.251 55.0 0.00 0.0 43.75 3.46 F
3071 3231 0.183492 AGTGTGTGTGGTCAGGCAAT 59.817 50.0 0.00 0.0 0.00 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2494 2647 0.538516 ATGTGTGCCAAGCCGGTAAA 60.539 50.0 1.9 0.0 36.97 2.01 R
3409 3663 0.036388 TGACAAATGCTCCCTCGTCC 60.036 55.0 0.0 0.0 0.00 4.79 R
4418 4771 0.038744 CCCTGTGGCTCCTTGTTGAT 59.961 55.0 0.0 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.704190 ACCAGATCCATCTATCCGGT 57.296 50.000 0.00 0.00 34.85 5.28
22 23 2.977808 ACCAGATCCATCTATCCGGTT 58.022 47.619 0.00 0.00 34.85 4.44
23 24 2.634940 ACCAGATCCATCTATCCGGTTG 59.365 50.000 0.00 0.00 34.85 3.77
24 25 2.027745 CCAGATCCATCTATCCGGTTGG 60.028 54.545 0.00 2.57 34.85 3.77
25 26 1.625818 AGATCCATCTATCCGGTTGGC 59.374 52.381 0.00 0.00 34.85 4.52
26 27 1.625818 GATCCATCTATCCGGTTGGCT 59.374 52.381 0.00 0.00 34.14 4.75
27 28 1.507140 TCCATCTATCCGGTTGGCTT 58.493 50.000 0.00 0.00 34.14 4.35
28 29 1.140852 TCCATCTATCCGGTTGGCTTG 59.859 52.381 0.00 0.00 34.14 4.01
29 30 1.134098 CCATCTATCCGGTTGGCTTGT 60.134 52.381 0.00 0.00 34.14 3.16
30 31 2.643551 CATCTATCCGGTTGGCTTGTT 58.356 47.619 0.00 0.00 34.14 2.83
31 32 2.107950 TCTATCCGGTTGGCTTGTTG 57.892 50.000 0.00 0.00 34.14 3.33
32 33 1.094785 CTATCCGGTTGGCTTGTTGG 58.905 55.000 0.00 0.00 34.14 3.77
33 34 0.402504 TATCCGGTTGGCTTGTTGGT 59.597 50.000 0.00 0.00 34.14 3.67
34 35 1.178534 ATCCGGTTGGCTTGTTGGTG 61.179 55.000 0.00 0.00 34.14 4.17
35 36 2.124693 CCGGTTGGCTTGTTGGTGT 61.125 57.895 0.00 0.00 0.00 4.16
36 37 1.065600 CGGTTGGCTTGTTGGTGTG 59.934 57.895 0.00 0.00 0.00 3.82
37 38 1.662438 CGGTTGGCTTGTTGGTGTGT 61.662 55.000 0.00 0.00 0.00 3.72
38 39 1.394618 GGTTGGCTTGTTGGTGTGTA 58.605 50.000 0.00 0.00 0.00 2.90
39 40 1.336755 GGTTGGCTTGTTGGTGTGTAG 59.663 52.381 0.00 0.00 0.00 2.74
40 41 2.294074 GTTGGCTTGTTGGTGTGTAGA 58.706 47.619 0.00 0.00 0.00 2.59
41 42 2.254546 TGGCTTGTTGGTGTGTAGAG 57.745 50.000 0.00 0.00 0.00 2.43
42 43 1.488812 TGGCTTGTTGGTGTGTAGAGT 59.511 47.619 0.00 0.00 0.00 3.24
43 44 1.873591 GGCTTGTTGGTGTGTAGAGTG 59.126 52.381 0.00 0.00 0.00 3.51
44 45 2.561569 GCTTGTTGGTGTGTAGAGTGT 58.438 47.619 0.00 0.00 0.00 3.55
45 46 2.287915 GCTTGTTGGTGTGTAGAGTGTG 59.712 50.000 0.00 0.00 0.00 3.82
46 47 2.613026 TGTTGGTGTGTAGAGTGTGG 57.387 50.000 0.00 0.00 0.00 4.17
47 48 2.112190 TGTTGGTGTGTAGAGTGTGGA 58.888 47.619 0.00 0.00 0.00 4.02
48 49 2.159014 TGTTGGTGTGTAGAGTGTGGAC 60.159 50.000 0.00 0.00 0.00 4.02
49 50 1.783071 TGGTGTGTAGAGTGTGGACA 58.217 50.000 0.00 0.00 0.00 4.02
50 51 1.411246 TGGTGTGTAGAGTGTGGACAC 59.589 52.381 1.42 1.42 46.77 3.67
58 59 2.665185 GTGTGGACACGTGGAGGC 60.665 66.667 21.57 7.93 37.10 4.70
59 60 3.936203 TGTGGACACGTGGAGGCC 61.936 66.667 21.57 15.25 0.00 5.19
60 61 3.936203 GTGGACACGTGGAGGCCA 61.936 66.667 21.57 17.62 0.00 5.36
61 62 3.625897 TGGACACGTGGAGGCCAG 61.626 66.667 21.57 0.00 32.34 4.85
63 64 4.008933 GACACGTGGAGGCCAGCT 62.009 66.667 21.57 0.00 32.34 4.24
64 65 2.603473 ACACGTGGAGGCCAGCTA 60.603 61.111 21.57 0.00 32.34 3.32
65 66 2.185350 CACGTGGAGGCCAGCTAG 59.815 66.667 7.95 0.00 32.34 3.42
66 67 3.775654 ACGTGGAGGCCAGCTAGC 61.776 66.667 6.62 6.62 32.34 3.42
67 68 3.465403 CGTGGAGGCCAGCTAGCT 61.465 66.667 12.68 12.68 32.34 3.32
68 69 2.127869 CGTGGAGGCCAGCTAGCTA 61.128 63.158 18.86 0.00 32.34 3.32
69 70 1.745264 GTGGAGGCCAGCTAGCTAG 59.255 63.158 18.86 16.84 32.34 3.42
70 71 1.458398 TGGAGGCCAGCTAGCTAGG 60.458 63.158 18.86 20.81 0.00 3.02
71 72 1.458588 GGAGGCCAGCTAGCTAGGT 60.459 63.158 18.86 19.65 33.70 3.08
80 81 4.571372 CAGCTAGCTAGGTGGTAGTTAC 57.429 50.000 35.09 11.37 45.40 2.50
81 82 3.318557 CAGCTAGCTAGGTGGTAGTTACC 59.681 52.174 35.09 10.91 45.40 2.85
97 98 8.726870 GGTAGTTACCATTGCTTGTAGATAAA 57.273 34.615 3.45 0.00 45.73 1.40
98 99 9.169592 GGTAGTTACCATTGCTTGTAGATAAAA 57.830 33.333 3.45 0.00 45.73 1.52
103 104 9.868277 TTACCATTGCTTGTAGATAAAATTTGG 57.132 29.630 0.00 0.00 0.00 3.28
104 105 7.906327 ACCATTGCTTGTAGATAAAATTTGGT 58.094 30.769 0.00 0.00 0.00 3.67
105 106 9.030452 ACCATTGCTTGTAGATAAAATTTGGTA 57.970 29.630 0.00 0.00 29.93 3.25
106 107 9.868277 CCATTGCTTGTAGATAAAATTTGGTAA 57.132 29.630 0.00 0.00 0.00 2.85
117 118 9.088987 AGATAAAATTTGGTAAAGATGTGTGGT 57.911 29.630 0.00 0.00 0.00 4.16
118 119 9.705290 GATAAAATTTGGTAAAGATGTGTGGTT 57.295 29.630 0.00 0.00 0.00 3.67
119 120 9.705290 ATAAAATTTGGTAAAGATGTGTGGTTC 57.295 29.630 0.00 0.00 0.00 3.62
120 121 6.723298 AATTTGGTAAAGATGTGTGGTTCA 57.277 33.333 0.00 0.00 0.00 3.18
121 122 6.723298 ATTTGGTAAAGATGTGTGGTTCAA 57.277 33.333 0.00 0.00 0.00 2.69
122 123 6.531503 TTTGGTAAAGATGTGTGGTTCAAA 57.468 33.333 0.00 0.00 0.00 2.69
123 124 6.531503 TTGGTAAAGATGTGTGGTTCAAAA 57.468 33.333 0.00 0.00 0.00 2.44
124 125 6.531503 TGGTAAAGATGTGTGGTTCAAAAA 57.468 33.333 0.00 0.00 0.00 1.94
252 253 3.625897 CCTGCGTCCCTCCACACA 61.626 66.667 0.00 0.00 0.00 3.72
340 347 1.898574 CAGAACAACAAGGCCGCCT 60.899 57.895 5.94 5.94 33.87 5.52
388 395 2.124653 GAGAGGGAGCGACGAGGA 60.125 66.667 0.00 0.00 0.00 3.71
429 441 3.380320 AGAGGTATTATTTTTGCCGCACC 59.620 43.478 0.00 0.00 0.00 5.01
529 548 9.421806 TGTGAATGTGTAATTGGATTGAATTTC 57.578 29.630 0.00 0.00 0.00 2.17
530 549 8.872845 GTGAATGTGTAATTGGATTGAATTTCC 58.127 33.333 0.00 0.00 0.00 3.13
531 550 8.040132 TGAATGTGTAATTGGATTGAATTTCCC 58.960 33.333 0.00 0.00 31.87 3.97
532 551 6.293004 TGTGTAATTGGATTGAATTTCCCC 57.707 37.500 0.00 0.00 31.87 4.81
572 592 0.179100 CCGCACGGATTCTGAGATGT 60.179 55.000 2.01 0.00 37.50 3.06
573 593 1.067060 CCGCACGGATTCTGAGATGTA 59.933 52.381 2.01 0.00 37.50 2.29
574 594 2.120232 CGCACGGATTCTGAGATGTAC 58.880 52.381 0.00 0.00 0.00 2.90
612 632 3.157881 TCCTGATTCCGCCATAGTAGAG 58.842 50.000 0.00 0.00 0.00 2.43
636 656 1.736645 ACACGCTCGTCATTTCCCG 60.737 57.895 0.00 0.00 0.00 5.14
664 684 3.891977 GAGATCTAGACACAGCCACCATA 59.108 47.826 0.00 0.00 0.00 2.74
674 694 0.033796 AGCCACCATATGCAAGCTGT 60.034 50.000 9.88 0.00 0.00 4.40
680 700 3.057386 CACCATATGCAAGCTGTTGTGAA 60.057 43.478 0.00 0.00 35.92 3.18
723 860 2.113807 ACTACCCCTTCCGTTCCATAC 58.886 52.381 0.00 0.00 0.00 2.39
726 863 1.558294 ACCCCTTCCGTTCCATACTTC 59.442 52.381 0.00 0.00 0.00 3.01
752 889 3.556775 TCGTTGTTTTAGTTCCGTTCCTG 59.443 43.478 0.00 0.00 0.00 3.86
769 906 1.276421 CCTGGAACTCTGTACACCCAG 59.724 57.143 12.78 12.78 40.48 4.45
770 907 0.685097 TGGAACTCTGTACACCCAGC 59.315 55.000 0.00 0.00 32.32 4.85
772 909 1.338200 GGAACTCTGTACACCCAGCAG 60.338 57.143 0.00 0.00 32.32 4.24
774 911 2.304221 ACTCTGTACACCCAGCAGTA 57.696 50.000 0.00 0.00 32.32 2.74
775 912 2.821437 ACTCTGTACACCCAGCAGTAT 58.179 47.619 0.00 0.00 32.32 2.12
776 913 3.977312 ACTCTGTACACCCAGCAGTATA 58.023 45.455 0.00 0.00 32.32 1.47
778 915 4.962995 ACTCTGTACACCCAGCAGTATAAT 59.037 41.667 0.00 0.00 32.32 1.28
779 916 5.163405 ACTCTGTACACCCAGCAGTATAATG 60.163 44.000 0.00 0.00 32.32 1.90
794 931 8.068893 GCAGTATAATGCAAAATTCAATCCAG 57.931 34.615 19.67 0.00 45.77 3.86
795 932 7.170320 GCAGTATAATGCAAAATTCAATCCAGG 59.830 37.037 19.67 0.00 45.77 4.45
796 933 7.654520 CAGTATAATGCAAAATTCAATCCAGGG 59.345 37.037 0.00 0.00 0.00 4.45
797 934 2.766345 TGCAAAATTCAATCCAGGGC 57.234 45.000 0.00 0.00 0.00 5.19
798 935 1.976404 TGCAAAATTCAATCCAGGGCA 59.024 42.857 0.00 0.00 0.00 5.36
819 956 3.541242 TGGTGGATCCAGGTTTCAAAT 57.459 42.857 16.81 0.00 41.93 2.32
820 957 4.666412 TGGTGGATCCAGGTTTCAAATA 57.334 40.909 16.81 0.00 41.93 1.40
821 958 5.205517 TGGTGGATCCAGGTTTCAAATAT 57.794 39.130 16.81 0.00 41.93 1.28
838 975 0.325860 TATTGGTACCGAGCCCTGGT 60.326 55.000 8.13 0.00 43.62 4.00
892 1032 5.450453 TGTTTCACTATTGGGGTTTCTTCA 58.550 37.500 0.00 0.00 0.00 3.02
893 1033 5.894393 TGTTTCACTATTGGGGTTTCTTCAA 59.106 36.000 0.00 0.00 0.00 2.69
894 1034 6.381420 TGTTTCACTATTGGGGTTTCTTCAAA 59.619 34.615 0.00 0.00 0.00 2.69
895 1035 7.070571 TGTTTCACTATTGGGGTTTCTTCAAAT 59.929 33.333 0.00 0.00 0.00 2.32
896 1036 6.834168 TCACTATTGGGGTTTCTTCAAATC 57.166 37.500 0.00 0.00 0.00 2.17
897 1037 6.552008 TCACTATTGGGGTTTCTTCAAATCT 58.448 36.000 0.00 0.00 0.00 2.40
898 1038 7.010160 TCACTATTGGGGTTTCTTCAAATCTT 58.990 34.615 0.00 0.00 0.00 2.40
899 1039 7.176690 TCACTATTGGGGTTTCTTCAAATCTTC 59.823 37.037 0.00 0.00 0.00 2.87
905 1045 7.010160 TGGGGTTTCTTCAAATCTTCATTACT 58.990 34.615 0.00 0.00 0.00 2.24
976 1116 3.258123 GCTGATTTTTCTTTGCCCAGGTA 59.742 43.478 0.00 0.00 0.00 3.08
979 1119 5.636123 TGATTTTTCTTTGCCCAGGTACTA 58.364 37.500 0.00 0.00 36.02 1.82
992 1132 0.540454 GGTACTAGGGCGGCTTCTTT 59.460 55.000 9.56 0.00 0.00 2.52
1028 1168 1.354506 GTCTGCTGAATCCGCATGC 59.645 57.895 7.91 7.91 36.70 4.06
1055 1195 2.170166 TGGAAAATTGCTAGCTGTGGG 58.830 47.619 17.23 0.00 0.00 4.61
1104 1244 3.847709 GCTGCTTCGTCGCTGAGC 61.848 66.667 0.00 0.00 0.00 4.26
1128 1268 1.670811 CAGGTACGCATGGGTTGAATC 59.329 52.381 21.44 3.40 0.00 2.52
1129 1269 1.021968 GGTACGCATGGGTTGAATCC 58.978 55.000 21.44 11.68 0.00 3.01
1130 1270 0.655733 GTACGCATGGGTTGAATCCG 59.344 55.000 21.44 1.15 0.00 4.18
1133 1273 1.024046 CGCATGGGTTGAATCCGACA 61.024 55.000 0.68 0.00 0.00 4.35
1143 1283 3.574284 TGAATCCGACATTTTTGCCTG 57.426 42.857 0.00 0.00 0.00 4.85
1166 1306 3.930229 TGTGATTCTACGTGGGATTTTCG 59.070 43.478 0.00 0.00 0.00 3.46
1170 1310 3.880047 TCTACGTGGGATTTTCGACAT 57.120 42.857 0.00 0.00 0.00 3.06
1172 1312 5.327616 TCTACGTGGGATTTTCGACATAA 57.672 39.130 0.00 0.00 0.00 1.90
1178 1318 6.090129 CGTGGGATTTTCGACATAATTTGTT 58.910 36.000 0.00 0.00 39.18 2.83
1200 1340 3.581024 TGCATTGCTGAATTCAGTTCC 57.419 42.857 30.88 18.06 45.45 3.62
1205 1345 3.726557 TGCTGAATTCAGTTCCAGGAT 57.273 42.857 30.88 0.00 45.45 3.24
1206 1346 4.038271 TGCTGAATTCAGTTCCAGGATT 57.962 40.909 30.88 0.00 45.45 3.01
1207 1347 4.410099 TGCTGAATTCAGTTCCAGGATTT 58.590 39.130 30.88 0.00 45.45 2.17
1208 1348 4.834496 TGCTGAATTCAGTTCCAGGATTTT 59.166 37.500 30.88 0.00 45.45 1.82
1209 1349 5.166398 GCTGAATTCAGTTCCAGGATTTTG 58.834 41.667 30.88 7.17 45.45 2.44
1210 1350 5.717119 CTGAATTCAGTTCCAGGATTTTGG 58.283 41.667 24.65 0.00 39.09 3.28
1211 1351 5.147032 TGAATTCAGTTCCAGGATTTTGGT 58.853 37.500 3.38 0.00 39.35 3.67
1212 1352 5.010922 TGAATTCAGTTCCAGGATTTTGGTG 59.989 40.000 3.38 0.00 39.35 4.17
1213 1353 2.238521 TCAGTTCCAGGATTTTGGTGC 58.761 47.619 0.00 0.00 39.35 5.01
1214 1354 1.273327 CAGTTCCAGGATTTTGGTGCC 59.727 52.381 0.00 0.00 39.35 5.01
1215 1355 1.147817 AGTTCCAGGATTTTGGTGCCT 59.852 47.619 0.00 0.00 39.35 4.75
1216 1356 1.273327 GTTCCAGGATTTTGGTGCCTG 59.727 52.381 0.00 0.00 46.83 4.85
1217 1357 0.482446 TCCAGGATTTTGGTGCCTGT 59.518 50.000 0.00 0.00 46.05 4.00
1218 1358 1.707989 TCCAGGATTTTGGTGCCTGTA 59.292 47.619 0.00 0.00 46.05 2.74
1219 1359 2.311542 TCCAGGATTTTGGTGCCTGTAT 59.688 45.455 0.00 0.00 46.05 2.29
1220 1360 2.428171 CCAGGATTTTGGTGCCTGTATG 59.572 50.000 0.00 0.00 46.05 2.39
1221 1361 3.355378 CAGGATTTTGGTGCCTGTATGA 58.645 45.455 0.00 0.00 43.25 2.15
1222 1362 3.379372 CAGGATTTTGGTGCCTGTATGAG 59.621 47.826 0.00 0.00 43.25 2.90
1223 1363 2.689983 GGATTTTGGTGCCTGTATGAGG 59.310 50.000 0.00 0.00 46.13 3.86
1224 1364 2.969821 TTTTGGTGCCTGTATGAGGT 57.030 45.000 0.00 0.00 44.97 3.85
1225 1365 2.198827 TTTGGTGCCTGTATGAGGTG 57.801 50.000 0.00 0.00 44.97 4.00
1226 1366 1.064003 TTGGTGCCTGTATGAGGTGT 58.936 50.000 0.00 0.00 44.97 4.16
1227 1367 1.945580 TGGTGCCTGTATGAGGTGTA 58.054 50.000 0.00 0.00 44.97 2.90
1228 1368 1.831106 TGGTGCCTGTATGAGGTGTAG 59.169 52.381 0.00 0.00 44.97 2.74
1229 1369 1.473434 GGTGCCTGTATGAGGTGTAGC 60.473 57.143 0.00 0.00 44.97 3.58
1230 1370 1.482593 GTGCCTGTATGAGGTGTAGCT 59.517 52.381 0.00 0.00 44.97 3.32
1231 1371 1.757118 TGCCTGTATGAGGTGTAGCTC 59.243 52.381 4.22 4.22 44.97 4.09
1232 1372 1.269309 GCCTGTATGAGGTGTAGCTCG 60.269 57.143 6.60 0.00 44.97 5.03
1233 1373 2.298610 CCTGTATGAGGTGTAGCTCGA 58.701 52.381 6.60 0.00 37.02 4.04
1234 1374 2.292016 CCTGTATGAGGTGTAGCTCGAG 59.708 54.545 8.45 8.45 37.02 4.04
1235 1375 1.676529 TGTATGAGGTGTAGCTCGAGC 59.323 52.381 30.01 30.01 42.49 5.03
1236 1376 1.676529 GTATGAGGTGTAGCTCGAGCA 59.323 52.381 36.87 21.06 45.16 4.26
1237 1377 0.743688 ATGAGGTGTAGCTCGAGCAG 59.256 55.000 36.87 2.47 45.16 4.24
1238 1378 0.322546 TGAGGTGTAGCTCGAGCAGA 60.323 55.000 36.87 22.71 45.16 4.26
1239 1379 0.811915 GAGGTGTAGCTCGAGCAGAA 59.188 55.000 36.87 20.24 45.16 3.02
1240 1380 1.202582 GAGGTGTAGCTCGAGCAGAAA 59.797 52.381 36.87 18.38 45.16 2.52
1241 1381 1.827969 AGGTGTAGCTCGAGCAGAAAT 59.172 47.619 36.87 19.82 45.16 2.17
1242 1382 2.234908 AGGTGTAGCTCGAGCAGAAATT 59.765 45.455 36.87 19.08 45.16 1.82
1243 1383 2.349886 GGTGTAGCTCGAGCAGAAATTG 59.650 50.000 36.87 0.00 45.16 2.32
1244 1384 3.254060 GTGTAGCTCGAGCAGAAATTGA 58.746 45.455 36.87 10.52 45.16 2.57
1245 1385 3.868077 GTGTAGCTCGAGCAGAAATTGAT 59.132 43.478 36.87 16.87 45.16 2.57
1246 1386 4.331168 GTGTAGCTCGAGCAGAAATTGATT 59.669 41.667 36.87 16.14 45.16 2.57
1247 1387 4.937620 TGTAGCTCGAGCAGAAATTGATTT 59.062 37.500 36.87 15.62 45.16 2.17
1248 1388 5.412594 TGTAGCTCGAGCAGAAATTGATTTT 59.587 36.000 36.87 15.42 45.16 1.82
1249 1389 4.730657 AGCTCGAGCAGAAATTGATTTTG 58.269 39.130 36.87 0.00 45.16 2.44
1250 1390 3.855950 GCTCGAGCAGAAATTGATTTTGG 59.144 43.478 31.91 0.00 41.59 3.28
1251 1391 4.616835 GCTCGAGCAGAAATTGATTTTGGT 60.617 41.667 31.91 0.00 41.59 3.67
1252 1392 5.391950 GCTCGAGCAGAAATTGATTTTGGTA 60.392 40.000 31.91 0.00 41.59 3.25
1253 1393 6.182039 TCGAGCAGAAATTGATTTTGGTAG 57.818 37.500 0.00 0.00 0.00 3.18
1254 1394 5.937540 TCGAGCAGAAATTGATTTTGGTAGA 59.062 36.000 0.00 1.79 0.00 2.59
1255 1395 6.599244 TCGAGCAGAAATTGATTTTGGTAGAT 59.401 34.615 0.00 0.00 0.00 1.98
1256 1396 6.909357 CGAGCAGAAATTGATTTTGGTAGATC 59.091 38.462 0.00 0.00 0.00 2.75
1257 1397 7.414429 CGAGCAGAAATTGATTTTGGTAGATCA 60.414 37.037 0.00 0.00 0.00 2.92
1258 1398 8.302515 AGCAGAAATTGATTTTGGTAGATCAT 57.697 30.769 0.00 0.00 32.73 2.45
1259 1399 8.411683 AGCAGAAATTGATTTTGGTAGATCATC 58.588 33.333 0.00 0.00 32.73 2.92
1260 1400 7.650903 GCAGAAATTGATTTTGGTAGATCATCC 59.349 37.037 0.00 0.00 32.73 3.51
1261 1401 7.859377 CAGAAATTGATTTTGGTAGATCATCCG 59.141 37.037 0.00 0.00 32.73 4.18
1262 1402 5.695851 ATTGATTTTGGTAGATCATCCGC 57.304 39.130 0.00 0.00 32.73 5.54
1263 1403 4.422073 TGATTTTGGTAGATCATCCGCT 57.578 40.909 0.00 0.00 0.00 5.52
1264 1404 4.780815 TGATTTTGGTAGATCATCCGCTT 58.219 39.130 0.00 0.00 0.00 4.68
1265 1405 5.192927 TGATTTTGGTAGATCATCCGCTTT 58.807 37.500 0.00 0.00 0.00 3.51
1266 1406 5.652014 TGATTTTGGTAGATCATCCGCTTTT 59.348 36.000 0.00 0.00 0.00 2.27
1267 1407 5.560966 TTTTGGTAGATCATCCGCTTTTC 57.439 39.130 0.00 0.00 0.00 2.29
1268 1408 4.487714 TTGGTAGATCATCCGCTTTTCT 57.512 40.909 0.00 0.00 0.00 2.52
1269 1409 3.797039 TGGTAGATCATCCGCTTTTCTG 58.203 45.455 0.00 0.00 0.00 3.02
1270 1410 3.197766 TGGTAGATCATCCGCTTTTCTGT 59.802 43.478 0.00 0.00 0.00 3.41
1271 1411 3.557595 GGTAGATCATCCGCTTTTCTGTG 59.442 47.826 0.00 0.00 0.00 3.66
1272 1412 3.340814 AGATCATCCGCTTTTCTGTGT 57.659 42.857 0.00 0.00 0.00 3.72
1273 1413 3.005554 AGATCATCCGCTTTTCTGTGTG 58.994 45.455 0.00 0.00 0.00 3.82
1274 1414 2.254546 TCATCCGCTTTTCTGTGTGT 57.745 45.000 0.00 0.00 0.00 3.72
1275 1415 1.872952 TCATCCGCTTTTCTGTGTGTG 59.127 47.619 0.00 0.00 0.00 3.82
1276 1416 1.603802 CATCCGCTTTTCTGTGTGTGT 59.396 47.619 0.00 0.00 0.00 3.72
1277 1417 1.013596 TCCGCTTTTCTGTGTGTGTG 58.986 50.000 0.00 0.00 0.00 3.82
1278 1418 0.732571 CCGCTTTTCTGTGTGTGTGT 59.267 50.000 0.00 0.00 0.00 3.72
1279 1419 1.531677 CCGCTTTTCTGTGTGTGTGTG 60.532 52.381 0.00 0.00 0.00 3.82
1280 1420 1.130373 CGCTTTTCTGTGTGTGTGTGT 59.870 47.619 0.00 0.00 0.00 3.72
1281 1421 2.518949 GCTTTTCTGTGTGTGTGTGTG 58.481 47.619 0.00 0.00 0.00 3.82
1282 1422 2.518949 CTTTTCTGTGTGTGTGTGTGC 58.481 47.619 0.00 0.00 0.00 4.57
1283 1423 0.445829 TTTCTGTGTGTGTGTGTGCG 59.554 50.000 0.00 0.00 0.00 5.34
1284 1424 1.976478 TTCTGTGTGTGTGTGTGCGC 61.976 55.000 0.00 0.00 0.00 6.09
1285 1425 3.772000 CTGTGTGTGTGTGTGCGCG 62.772 63.158 0.00 0.00 0.00 6.86
1302 1442 3.348454 GCACGCGCGTAATTGTTG 58.652 55.556 37.24 22.23 0.00 3.33
1303 1443 2.763929 GCACGCGCGTAATTGTTGC 61.764 57.895 37.24 27.91 0.00 4.17
1304 1444 2.143458 CACGCGCGTAATTGTTGCC 61.143 57.895 37.24 0.00 0.00 4.52
1305 1445 2.322081 ACGCGCGTAATTGTTGCCT 61.322 52.632 37.08 4.02 0.00 4.75
1306 1446 1.580132 CGCGCGTAATTGTTGCCTC 60.580 57.895 24.19 0.00 0.00 4.70
1307 1447 1.226295 GCGCGTAATTGTTGCCTCC 60.226 57.895 8.43 0.00 0.00 4.30
1308 1448 1.917782 GCGCGTAATTGTTGCCTCCA 61.918 55.000 8.43 0.00 0.00 3.86
1309 1449 0.732571 CGCGTAATTGTTGCCTCCAT 59.267 50.000 0.00 0.00 0.00 3.41
1310 1450 1.937223 CGCGTAATTGTTGCCTCCATA 59.063 47.619 0.00 0.00 0.00 2.74
1311 1451 2.548057 CGCGTAATTGTTGCCTCCATAT 59.452 45.455 0.00 0.00 0.00 1.78
1312 1452 3.743911 CGCGTAATTGTTGCCTCCATATA 59.256 43.478 0.00 0.00 0.00 0.86
1313 1453 4.391830 CGCGTAATTGTTGCCTCCATATAT 59.608 41.667 0.00 0.00 0.00 0.86
1314 1454 5.631026 GCGTAATTGTTGCCTCCATATATG 58.369 41.667 5.68 5.68 0.00 1.78
1315 1455 5.411361 GCGTAATTGTTGCCTCCATATATGA 59.589 40.000 14.54 0.00 0.00 2.15
1316 1456 6.072728 GCGTAATTGTTGCCTCCATATATGAA 60.073 38.462 14.54 0.00 0.00 2.57
1317 1457 7.362056 GCGTAATTGTTGCCTCCATATATGAAT 60.362 37.037 14.54 0.73 0.00 2.57
1318 1458 9.161629 CGTAATTGTTGCCTCCATATATGAATA 57.838 33.333 14.54 0.00 0.00 1.75
1322 1462 7.395190 TGTTGCCTCCATATATGAATAATGC 57.605 36.000 14.54 8.12 0.00 3.56
1323 1463 7.177184 TGTTGCCTCCATATATGAATAATGCT 58.823 34.615 14.54 0.00 0.00 3.79
1324 1464 7.121611 TGTTGCCTCCATATATGAATAATGCTG 59.878 37.037 14.54 0.00 0.00 4.41
1325 1465 6.961042 TGCCTCCATATATGAATAATGCTGA 58.039 36.000 14.54 0.00 0.00 4.26
1326 1466 7.404481 TGCCTCCATATATGAATAATGCTGAA 58.596 34.615 14.54 0.00 0.00 3.02
1327 1467 8.057011 TGCCTCCATATATGAATAATGCTGAAT 58.943 33.333 14.54 0.00 0.00 2.57
1328 1468 9.565090 GCCTCCATATATGAATAATGCTGAATA 57.435 33.333 14.54 0.00 0.00 1.75
1335 1475 6.564709 ATGAATAATGCTGAATATGTGCGT 57.435 33.333 0.00 0.00 0.00 5.24
1336 1476 7.671495 ATGAATAATGCTGAATATGTGCGTA 57.329 32.000 0.00 0.00 0.00 4.42
1337 1477 7.489574 TGAATAATGCTGAATATGTGCGTAA 57.510 32.000 0.00 0.00 0.00 3.18
1338 1478 8.098220 TGAATAATGCTGAATATGTGCGTAAT 57.902 30.769 0.00 0.00 0.00 1.89
1339 1479 8.567104 TGAATAATGCTGAATATGTGCGTAATT 58.433 29.630 0.00 0.00 0.00 1.40
1343 1483 8.732413 AATGCTGAATATGTGCGTAATTATTG 57.268 30.769 0.00 0.00 0.00 1.90
1344 1484 7.489574 TGCTGAATATGTGCGTAATTATTGA 57.510 32.000 0.00 0.00 0.00 2.57
1345 1485 8.098220 TGCTGAATATGTGCGTAATTATTGAT 57.902 30.769 0.00 0.00 0.00 2.57
1346 1486 8.016801 TGCTGAATATGTGCGTAATTATTGATG 58.983 33.333 0.00 0.00 0.00 3.07
1347 1487 8.229811 GCTGAATATGTGCGTAATTATTGATGA 58.770 33.333 0.00 0.00 0.00 2.92
1353 1493 8.607441 ATGTGCGTAATTATTGATGATGTAGT 57.393 30.769 0.00 0.00 0.00 2.73
1354 1494 8.432110 TGTGCGTAATTATTGATGATGTAGTT 57.568 30.769 0.00 0.00 0.00 2.24
1355 1495 8.334632 TGTGCGTAATTATTGATGATGTAGTTG 58.665 33.333 0.00 0.00 0.00 3.16
1356 1496 8.335356 GTGCGTAATTATTGATGATGTAGTTGT 58.665 33.333 0.00 0.00 0.00 3.32
1357 1497 9.535878 TGCGTAATTATTGATGATGTAGTTGTA 57.464 29.630 0.00 0.00 0.00 2.41
1377 1517 9.953697 AGTTGTAAAATTTAATTCGTACAAGCA 57.046 25.926 18.77 4.76 35.30 3.91
1378 1518 9.983431 GTTGTAAAATTTAATTCGTACAAGCAC 57.017 29.630 18.77 10.43 35.30 4.40
1379 1519 8.730970 TGTAAAATTTAATTCGTACAAGCACC 57.269 30.769 10.04 0.00 0.00 5.01
1380 1520 8.350722 TGTAAAATTTAATTCGTACAAGCACCA 58.649 29.630 10.04 0.00 0.00 4.17
1381 1521 9.349145 GTAAAATTTAATTCGTACAAGCACCAT 57.651 29.630 0.00 0.00 0.00 3.55
1382 1522 8.825667 AAAATTTAATTCGTACAAGCACCATT 57.174 26.923 0.00 0.00 0.00 3.16
1383 1523 8.825667 AAATTTAATTCGTACAAGCACCATTT 57.174 26.923 0.00 0.00 0.00 2.32
1384 1524 8.460831 AATTTAATTCGTACAAGCACCATTTC 57.539 30.769 0.00 0.00 0.00 2.17
1385 1525 6.811253 TTAATTCGTACAAGCACCATTTCT 57.189 33.333 0.00 0.00 0.00 2.52
1386 1526 5.705609 AATTCGTACAAGCACCATTTCTT 57.294 34.783 0.00 0.00 0.00 2.52
1387 1527 4.481930 TTCGTACAAGCACCATTTCTTG 57.518 40.909 0.00 0.00 43.79 3.02
1397 1537 2.749280 CCATTTCTTGGGGACTTTGC 57.251 50.000 0.00 0.00 42.33 3.68
1398 1538 1.969923 CCATTTCTTGGGGACTTTGCA 59.030 47.619 0.00 0.00 42.33 4.08
1399 1539 2.568509 CCATTTCTTGGGGACTTTGCAT 59.431 45.455 0.00 0.00 42.33 3.96
1400 1540 3.768757 CCATTTCTTGGGGACTTTGCATA 59.231 43.478 0.00 0.00 42.33 3.14
1401 1541 4.406649 CCATTTCTTGGGGACTTTGCATAT 59.593 41.667 0.00 0.00 42.33 1.78
1402 1542 5.104817 CCATTTCTTGGGGACTTTGCATATT 60.105 40.000 0.00 0.00 42.33 1.28
1403 1543 6.408869 CATTTCTTGGGGACTTTGCATATTT 58.591 36.000 0.00 0.00 0.00 1.40
1404 1544 5.659440 TTCTTGGGGACTTTGCATATTTC 57.341 39.130 0.00 0.00 0.00 2.17
1405 1545 4.934356 TCTTGGGGACTTTGCATATTTCT 58.066 39.130 0.00 0.00 0.00 2.52
1406 1546 5.332743 TCTTGGGGACTTTGCATATTTCTT 58.667 37.500 0.00 0.00 0.00 2.52
1407 1547 5.185635 TCTTGGGGACTTTGCATATTTCTTG 59.814 40.000 0.00 0.00 0.00 3.02
1408 1548 3.195396 TGGGGACTTTGCATATTTCTTGC 59.805 43.478 0.00 0.00 40.55 4.01
1409 1549 3.430790 GGGGACTTTGCATATTTCTTGCC 60.431 47.826 0.00 0.00 39.39 4.52
1410 1550 3.195396 GGGACTTTGCATATTTCTTGCCA 59.805 43.478 0.00 0.00 39.39 4.92
1411 1551 4.176271 GGACTTTGCATATTTCTTGCCAC 58.824 43.478 0.00 0.00 39.39 5.01
1412 1552 4.082026 GGACTTTGCATATTTCTTGCCACT 60.082 41.667 0.00 0.00 39.39 4.00
1413 1553 5.473039 GACTTTGCATATTTCTTGCCACTT 58.527 37.500 0.00 0.00 39.39 3.16
1414 1554 6.350110 GGACTTTGCATATTTCTTGCCACTTA 60.350 38.462 0.00 0.00 39.39 2.24
1415 1555 6.624423 ACTTTGCATATTTCTTGCCACTTAG 58.376 36.000 0.00 0.00 39.39 2.18
1416 1556 4.637483 TGCATATTTCTTGCCACTTAGC 57.363 40.909 0.00 0.00 39.39 3.09
1417 1557 3.065233 TGCATATTTCTTGCCACTTAGCG 59.935 43.478 0.00 0.00 39.39 4.26
1418 1558 3.065371 GCATATTTCTTGCCACTTAGCGT 59.935 43.478 0.00 0.00 33.95 5.07
1419 1559 4.438744 GCATATTTCTTGCCACTTAGCGTT 60.439 41.667 0.00 0.00 33.95 4.84
1420 1560 3.559238 ATTTCTTGCCACTTAGCGTTG 57.441 42.857 0.00 0.00 34.65 4.10
1421 1561 2.248280 TTCTTGCCACTTAGCGTTGA 57.752 45.000 0.00 0.00 34.65 3.18
1422 1562 2.472695 TCTTGCCACTTAGCGTTGAT 57.527 45.000 0.00 0.00 34.65 2.57
1423 1563 3.603158 TCTTGCCACTTAGCGTTGATA 57.397 42.857 0.00 0.00 34.65 2.15
1424 1564 3.932822 TCTTGCCACTTAGCGTTGATAA 58.067 40.909 0.00 0.00 34.65 1.75
1425 1565 4.513442 TCTTGCCACTTAGCGTTGATAAT 58.487 39.130 0.00 0.00 34.65 1.28
1426 1566 4.941263 TCTTGCCACTTAGCGTTGATAATT 59.059 37.500 0.00 0.00 34.65 1.40
1427 1567 5.414454 TCTTGCCACTTAGCGTTGATAATTT 59.586 36.000 0.00 0.00 34.65 1.82
1428 1568 6.596106 TCTTGCCACTTAGCGTTGATAATTTA 59.404 34.615 0.00 0.00 34.65 1.40
1429 1569 6.358118 TGCCACTTAGCGTTGATAATTTAG 57.642 37.500 0.00 0.00 34.65 1.85
1430 1570 5.878116 TGCCACTTAGCGTTGATAATTTAGT 59.122 36.000 0.00 0.00 34.65 2.24
1431 1571 6.373216 TGCCACTTAGCGTTGATAATTTAGTT 59.627 34.615 0.00 0.00 34.65 2.24
1432 1572 7.094549 TGCCACTTAGCGTTGATAATTTAGTTT 60.095 33.333 0.00 0.00 34.65 2.66
1433 1573 7.753580 GCCACTTAGCGTTGATAATTTAGTTTT 59.246 33.333 0.00 0.00 0.00 2.43
1434 1574 9.061610 CCACTTAGCGTTGATAATTTAGTTTTG 57.938 33.333 0.00 0.00 0.00 2.44
1435 1575 9.820229 CACTTAGCGTTGATAATTTAGTTTTGA 57.180 29.630 0.00 0.00 0.00 2.69
1436 1576 9.821662 ACTTAGCGTTGATAATTTAGTTTTGAC 57.178 29.630 0.00 0.00 0.00 3.18
1437 1577 9.820229 CTTAGCGTTGATAATTTAGTTTTGACA 57.180 29.630 0.00 0.00 0.00 3.58
1511 1651 3.211045 TGTGAGTTAGGTTTTCTGGTGC 58.789 45.455 0.00 0.00 0.00 5.01
1536 1676 9.760660 GCTAGTTAACTGTGTTTGATGATTAAG 57.239 33.333 18.56 2.74 0.00 1.85
1555 1695 7.446931 TGATTAAGAAGAGCCACAATGTTAACA 59.553 33.333 11.41 11.41 0.00 2.41
1559 1699 6.296026 AGAAGAGCCACAATGTTAACAACTA 58.704 36.000 13.23 0.00 0.00 2.24
1560 1700 5.941948 AGAGCCACAATGTTAACAACTAC 57.058 39.130 13.23 0.78 0.00 2.73
1561 1701 5.621193 AGAGCCACAATGTTAACAACTACT 58.379 37.500 13.23 5.72 0.00 2.57
1567 1707 6.205853 CCACAATGTTAACAACTACTTAGGCA 59.794 38.462 13.23 0.00 0.00 4.75
1643 1788 8.475639 TCTGTAAATTCTAATTCTAGTTCCGCT 58.524 33.333 0.00 0.00 0.00 5.52
1648 1793 4.279145 TCTAATTCTAGTTCCGCTCAGGT 58.721 43.478 0.00 0.00 41.99 4.00
1653 1798 2.032620 CTAGTTCCGCTCAGGTATGGT 58.967 52.381 0.00 0.00 41.99 3.55
1724 1869 0.250901 ATGCATATCCCGGCACCTTC 60.251 55.000 0.00 0.00 43.75 3.46
1750 1895 1.745087 ACCGCTTGCTCAACATAATGG 59.255 47.619 0.00 0.00 0.00 3.16
1924 2069 9.753674 AGATACTTTGGTAAAATTCCTTGATGA 57.246 29.630 0.00 0.00 0.00 2.92
2020 2165 5.828299 TTTGTTGAACGAAAAGGTGAGAT 57.172 34.783 0.00 0.00 0.00 2.75
2133 2286 2.638480 TTGGAGACACAAACCTGGAG 57.362 50.000 0.00 0.00 42.67 3.86
2136 2289 1.202818 GGAGACACAAACCTGGAGCTT 60.203 52.381 0.00 0.00 0.00 3.74
2156 2309 1.197430 CCCTCAGCTCTGTCCAACCT 61.197 60.000 0.00 0.00 0.00 3.50
2208 2361 2.602878 CCAAGCACATCAATGAACTGC 58.397 47.619 7.25 7.25 0.00 4.40
2308 2461 8.947055 AACAAGCTGTCAACTTGATTTATTTT 57.053 26.923 20.24 2.33 45.99 1.82
2353 2506 7.875971 ACACATACTTCTGATTGGAAAGTTTC 58.124 34.615 7.09 7.09 0.00 2.78
2380 2533 5.582953 TCTCAATTTGAGGAAATGGGTCAT 58.417 37.500 22.86 0.00 44.39 3.06
2391 2544 9.081204 TGAGGAAATGGGTCATATGATTATTTG 57.919 33.333 20.21 0.00 0.00 2.32
2437 2590 4.275936 GTGTTTATGTGCATATCACCTCCC 59.724 45.833 0.00 0.00 45.03 4.30
2440 2593 1.583556 TGTGCATATCACCTCCCTGT 58.416 50.000 0.00 0.00 45.03 4.00
2448 2601 3.833559 ATCACCTCCCTGTTGGAAATT 57.166 42.857 0.00 0.00 44.57 1.82
2465 2618 4.479619 GAAATTGAACAGTGCATCCTGAC 58.520 43.478 11.03 5.61 36.30 3.51
2466 2619 2.636647 TTGAACAGTGCATCCTGACA 57.363 45.000 11.03 7.77 36.30 3.58
2491 2644 6.207213 ACAGACGAAATAACTATTCTAGGCG 58.793 40.000 0.00 0.00 0.00 5.52
2493 2646 6.360148 CAGACGAAATAACTATTCTAGGCGAC 59.640 42.308 0.00 0.00 0.00 5.19
2508 2661 1.669760 CGACTTTACCGGCTTGGCA 60.670 57.895 0.00 0.00 43.94 4.92
2528 2681 6.289745 GGCACACATAATGGCAAATAATTG 57.710 37.500 0.00 0.00 42.03 2.32
2568 2721 2.558359 GCAGAACAGGCACCTAACAAAT 59.442 45.455 0.00 0.00 0.00 2.32
2569 2722 3.756434 GCAGAACAGGCACCTAACAAATA 59.244 43.478 0.00 0.00 0.00 1.40
2570 2723 4.379499 GCAGAACAGGCACCTAACAAATAC 60.379 45.833 0.00 0.00 0.00 1.89
2608 2761 5.643348 TCATGAATACCTTGCAACTGTAGTG 59.357 40.000 8.56 6.07 0.00 2.74
2654 2808 3.868077 GTCACATCTCATAGTGTCCTTGC 59.132 47.826 0.00 0.00 37.07 4.01
2659 2813 5.356190 ACATCTCATAGTGTCCTTGCATTTG 59.644 40.000 0.00 0.00 0.00 2.32
2710 2866 5.047377 GCATCTCACCATAAAAGGTTTCCAA 60.047 40.000 0.00 0.00 40.77 3.53
2727 2883 6.821160 GGTTTCCAAATTTTCCAGAAGAACAA 59.179 34.615 0.00 0.00 32.95 2.83
2813 2971 5.537188 ACTGCGGAAAAATAATTGCTCAAA 58.463 33.333 0.00 0.00 0.00 2.69
2815 2973 7.319646 ACTGCGGAAAAATAATTGCTCAAATA 58.680 30.769 0.00 0.00 0.00 1.40
2835 2993 8.154203 TCAAATATGTAGTCAAACAAGAGACCA 58.846 33.333 0.00 0.00 35.38 4.02
2858 3016 4.703897 AGAAATGAGAAAGACGAACCACA 58.296 39.130 0.00 0.00 0.00 4.17
2889 3047 9.884465 GAATGCTAATAACTAAGTGGCATAAAG 57.116 33.333 0.00 0.00 37.85 1.85
2936 3094 4.645588 TGTTTTGGGTTTCATCGTTAGGTT 59.354 37.500 0.00 0.00 0.00 3.50
2986 3144 1.916181 CCTGGTTACCTTGATCCCACT 59.084 52.381 2.07 0.00 0.00 4.00
3045 3203 1.734465 CAGATCGAGTGAAACAAGGGC 59.266 52.381 0.00 0.00 41.43 5.19
3050 3208 1.692411 GAGTGAAACAAGGGCCACTT 58.308 50.000 6.18 2.33 41.43 3.16
3071 3231 0.183492 AGTGTGTGTGGTCAGGCAAT 59.817 50.000 0.00 0.00 0.00 3.56
3076 3236 2.614057 GTGTGTGGTCAGGCAATATAGC 59.386 50.000 0.00 0.00 0.00 2.97
3157 3344 8.761575 TTTTGGAATACTTTCATCTGAAATGC 57.238 30.769 5.86 0.00 42.44 3.56
3159 3346 7.092137 TGGAATACTTTCATCTGAAATGCTG 57.908 36.000 5.86 0.00 42.44 4.41
3161 3348 7.828717 TGGAATACTTTCATCTGAAATGCTGTA 59.171 33.333 5.86 5.65 42.44 2.74
3162 3349 8.125448 GGAATACTTTCATCTGAAATGCTGTAC 58.875 37.037 5.86 0.00 42.44 2.90
3169 3356 5.748630 TCATCTGAAATGCTGTACGTGTATC 59.251 40.000 0.00 0.00 0.00 2.24
3170 3357 5.066968 TCTGAAATGCTGTACGTGTATCA 57.933 39.130 0.00 0.00 0.00 2.15
3213 3400 6.170846 AGTAGAAAGAAAGAGAAAACCGGA 57.829 37.500 9.46 0.00 0.00 5.14
3252 3463 5.509501 CCATTTGCATGTTCTAACTTGGTGT 60.510 40.000 9.84 0.00 35.36 4.16
3256 3467 6.701145 TGCATGTTCTAACTTGGTGTAAAA 57.299 33.333 9.84 0.00 35.36 1.52
3320 3541 8.470805 GTTCTCATGTTGATCTCCTTCTTACTA 58.529 37.037 0.00 0.00 0.00 1.82
3328 3549 3.883669 TCTCCTTCTTACTACCTCCGTC 58.116 50.000 0.00 0.00 0.00 4.79
3330 3551 1.674962 CCTTCTTACTACCTCCGTCCG 59.325 57.143 0.00 0.00 0.00 4.79
3331 3552 1.674962 CTTCTTACTACCTCCGTCCGG 59.325 57.143 0.00 0.00 0.00 5.14
3334 3555 2.092212 TCTTACTACCTCCGTCCGGAAT 60.092 50.000 5.23 3.83 44.66 3.01
3337 3558 2.027385 ACTACCTCCGTCCGGAATTAC 58.973 52.381 5.23 0.00 44.66 1.89
3338 3559 2.305009 CTACCTCCGTCCGGAATTACT 58.695 52.381 5.23 0.00 44.66 2.24
3339 3560 1.565067 ACCTCCGTCCGGAATTACTT 58.435 50.000 5.23 0.00 44.66 2.24
3343 3564 1.135315 TCCGTCCGGAATTACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
3344 3565 0.643820 CGTCCGGAATTACTTGTCGC 59.356 55.000 5.23 0.00 0.00 5.19
3346 3567 1.925185 GTCCGGAATTACTTGTCGCTC 59.075 52.381 5.23 0.00 0.00 5.03
3347 3568 1.546923 TCCGGAATTACTTGTCGCTCA 59.453 47.619 0.00 0.00 0.00 4.26
3349 3570 2.739913 CCGGAATTACTTGTCGCTCAAA 59.260 45.455 0.00 0.00 35.48 2.69
3350 3571 3.374058 CCGGAATTACTTGTCGCTCAAAT 59.626 43.478 0.00 0.00 35.48 2.32
3352 3573 4.662145 GGAATTACTTGTCGCTCAAATGG 58.338 43.478 0.00 0.00 35.48 3.16
3353 3574 4.394920 GGAATTACTTGTCGCTCAAATGGA 59.605 41.667 0.00 0.00 35.48 3.41
3355 3576 4.944962 TTACTTGTCGCTCAAATGGATG 57.055 40.909 0.00 0.00 35.48 3.51
3358 3579 4.517285 ACTTGTCGCTCAAATGGATGTAT 58.483 39.130 0.00 0.00 35.48 2.29
3359 3580 4.572389 ACTTGTCGCTCAAATGGATGTATC 59.428 41.667 0.00 0.00 35.48 2.24
3360 3581 4.406648 TGTCGCTCAAATGGATGTATCT 57.593 40.909 0.00 0.00 0.00 1.98
3361 3582 5.529581 TGTCGCTCAAATGGATGTATCTA 57.470 39.130 0.00 0.00 0.00 1.98
3363 3584 5.069119 TGTCGCTCAAATGGATGTATCTAGT 59.931 40.000 0.00 0.00 0.00 2.57
3364 3585 5.986135 GTCGCTCAAATGGATGTATCTAGTT 59.014 40.000 0.00 0.00 0.00 2.24
3365 3586 5.985530 TCGCTCAAATGGATGTATCTAGTTG 59.014 40.000 10.79 10.79 42.26 3.16
3368 3589 7.600375 CGCTCAAATGGATGTATCTAGTTGTAT 59.400 37.037 14.86 0.00 41.81 2.29
3369 3590 9.277783 GCTCAAATGGATGTATCTAGTTGTATT 57.722 33.333 14.86 0.00 41.81 1.89
3394 3648 9.571810 TTTTAGTGCTAAATACATGCATTTGAG 57.428 29.630 13.22 8.23 39.00 3.02
3396 3650 5.068198 AGTGCTAAATACATGCATTTGAGGG 59.932 40.000 13.22 3.61 39.00 4.30
3397 3651 5.067674 GTGCTAAATACATGCATTTGAGGGA 59.932 40.000 13.22 3.44 39.00 4.20
3398 3652 5.067674 TGCTAAATACATGCATTTGAGGGAC 59.932 40.000 13.22 0.00 30.84 4.46
3399 3653 5.067674 GCTAAATACATGCATTTGAGGGACA 59.932 40.000 13.22 0.00 30.84 4.02
3400 3654 5.999205 AAATACATGCATTTGAGGGACAA 57.001 34.783 3.00 0.00 36.65 3.18
3401 3655 5.587388 AATACATGCATTTGAGGGACAAG 57.413 39.130 0.00 0.00 39.77 3.16
3403 3657 4.032960 ACATGCATTTGAGGGACAAGTA 57.967 40.909 0.00 0.00 39.77 2.24
3404 3658 4.406456 ACATGCATTTGAGGGACAAGTAA 58.594 39.130 0.00 0.00 39.77 2.24
3405 3659 5.018809 ACATGCATTTGAGGGACAAGTAAT 58.981 37.500 0.00 0.00 39.77 1.89
3406 3660 5.481473 ACATGCATTTGAGGGACAAGTAATT 59.519 36.000 0.00 0.00 39.77 1.40
3408 3662 6.509418 TGCATTTGAGGGACAAGTAATTAC 57.491 37.500 7.57 7.57 39.77 1.89
3409 3663 5.123186 TGCATTTGAGGGACAAGTAATTACG 59.877 40.000 9.91 0.00 39.77 3.18
3410 3664 5.448632 GCATTTGAGGGACAAGTAATTACGG 60.449 44.000 9.91 8.99 39.77 4.02
3411 3665 5.486735 TTTGAGGGACAAGTAATTACGGA 57.513 39.130 9.91 0.00 39.77 4.69
3412 3666 4.460948 TGAGGGACAAGTAATTACGGAC 57.539 45.455 9.91 7.02 0.00 4.79
3415 3692 3.129988 AGGGACAAGTAATTACGGACGAG 59.870 47.826 9.91 1.26 0.00 4.18
3420 3697 1.680207 AGTAATTACGGACGAGGGAGC 59.320 52.381 9.91 0.00 0.00 4.70
3447 3724 4.041567 TGTCATGGAAGGTGAATGTACACT 59.958 41.667 0.00 0.00 40.22 3.55
3451 3728 3.146066 GGAAGGTGAATGTACACTGCAA 58.854 45.455 0.00 0.00 40.22 4.08
3523 3801 7.877612 TCTCTTGTAACAGATGCTTGATGTTAA 59.122 33.333 7.97 0.00 40.14 2.01
3557 3863 7.574030 GCTTTCTCCCTCAAGAAAATGTCTAAC 60.574 40.741 1.26 0.00 42.93 2.34
3572 3878 5.073311 TGTCTAACATTCTGTAGTCCAGC 57.927 43.478 0.00 0.00 41.25 4.85
3574 3880 4.081642 GTCTAACATTCTGTAGTCCAGCCA 60.082 45.833 0.00 0.00 41.25 4.75
3579 3885 5.079643 ACATTCTGTAGTCCAGCCAAATTT 58.920 37.500 0.00 0.00 41.25 1.82
3585 3891 6.823689 TCTGTAGTCCAGCCAAATTTTAGATC 59.176 38.462 0.00 0.00 41.25 2.75
3629 3935 6.560253 AATGTCACATACAGGTTTTCAGTC 57.440 37.500 0.00 0.00 42.70 3.51
3686 3992 3.452627 CCCCTAGCAGACTACTGATTGTT 59.547 47.826 0.00 0.00 46.03 2.83
3691 3997 7.014326 CCCTAGCAGACTACTGATTGTTGTATA 59.986 40.741 0.00 0.00 46.03 1.47
3709 4015 8.432013 TGTTGTATATATTTGCAGTCTCTGGAT 58.568 33.333 0.00 0.00 30.73 3.41
3781 4087 4.024302 CGTTACAGAAGAAAGGAAACCCAC 60.024 45.833 0.00 0.00 0.00 4.61
3785 4091 3.073946 CAGAAGAAAGGAAACCCACCCTA 59.926 47.826 0.00 0.00 31.36 3.53
3799 4105 1.004745 CACCCTAATTCCTGCCTGTGT 59.995 52.381 0.00 0.00 0.00 3.72
3820 4126 1.298713 CCTCCAGAATCTCGACGCG 60.299 63.158 3.53 3.53 0.00 6.01
3822 4128 0.309302 CTCCAGAATCTCGACGCGAT 59.691 55.000 15.93 0.00 34.61 4.58
3862 4168 2.120909 GCGCATACCCTGTGGCAAT 61.121 57.895 0.30 0.00 35.82 3.56
3970 4276 5.452777 GTTTCTTGATGCAAGTACTGGAAC 58.547 41.667 0.00 0.00 41.66 3.62
3971 4277 4.623932 TCTTGATGCAAGTACTGGAACT 57.376 40.909 0.00 0.00 41.66 3.01
3992 4298 2.212652 GCGAGACATGATGCATTGGTA 58.787 47.619 0.00 0.00 0.00 3.25
4010 4316 8.125448 GCATTGGTATACTTCAAAAGTCAGATC 58.875 37.037 2.25 0.00 41.77 2.75
4012 4318 6.931838 TGGTATACTTCAAAAGTCAGATCGT 58.068 36.000 2.25 0.00 41.77 3.73
4062 4368 4.615452 GCAATCTGCAGTTTTCAGAGGAAG 60.615 45.833 14.67 0.00 44.26 3.46
4067 4373 2.362077 GCAGTTTTCAGAGGAAGCCAAA 59.638 45.455 0.00 0.00 33.82 3.28
4074 4380 0.546598 AGAGGAAGCCAAATACGGGG 59.453 55.000 0.00 0.00 0.00 5.73
4120 4426 3.274288 GTGTTTGCCCAATGTTTTTGGA 58.726 40.909 5.95 0.00 42.06 3.53
4126 4432 4.640364 TGCCCAATGTTTTTGGAAATCTC 58.360 39.130 5.95 0.00 42.06 2.75
4199 4552 0.254462 TATCCTTTGCGGCATGTGGA 59.746 50.000 17.18 17.18 0.00 4.02
4200 4553 0.396139 ATCCTTTGCGGCATGTGGAT 60.396 50.000 19.35 19.35 0.00 3.41
4203 4556 0.527113 CTTTGCGGCATGTGGATGAA 59.473 50.000 2.28 0.00 0.00 2.57
4221 4574 4.826274 TGAACTGGACCCTCAGAAATAG 57.174 45.455 0.00 0.00 38.11 1.73
4265 4618 2.786777 TGAACATCTCACAAGCATGCT 58.213 42.857 16.30 16.30 0.00 3.79
4270 4623 2.773993 TCTCACAAGCATGCTGATGA 57.226 45.000 23.48 24.44 0.00 2.92
4391 4744 7.433680 AGGTTTTGTAAAGGTGAATGTTGATC 58.566 34.615 0.00 0.00 0.00 2.92
4402 4755 6.666546 AGGTGAATGTTGATCCATCTTTCAAT 59.333 34.615 0.00 0.00 34.60 2.57
4403 4756 7.179694 AGGTGAATGTTGATCCATCTTTCAATT 59.820 33.333 0.00 0.00 34.60 2.32
4404 4757 7.820872 GGTGAATGTTGATCCATCTTTCAATTT 59.179 33.333 0.00 0.00 34.60 1.82
4405 4758 8.653338 GTGAATGTTGATCCATCTTTCAATTTG 58.347 33.333 0.00 0.00 34.60 2.32
4406 4759 7.820386 TGAATGTTGATCCATCTTTCAATTTGG 59.180 33.333 0.00 0.00 34.60 3.28
4407 4760 6.914654 TGTTGATCCATCTTTCAATTTGGA 57.085 33.333 0.00 0.00 42.18 3.53
4408 4761 7.300556 TGTTGATCCATCTTTCAATTTGGAA 57.699 32.000 0.00 0.00 41.36 3.53
4409 4762 7.909518 TGTTGATCCATCTTTCAATTTGGAAT 58.090 30.769 0.00 0.00 41.36 3.01
4471 4843 5.543507 ATTGCAACAAGGAACAAATGGTA 57.456 34.783 0.00 0.00 0.00 3.25
4473 4845 6.656632 TTGCAACAAGGAACAAATGGTATA 57.343 33.333 0.00 0.00 0.00 1.47
4474 4846 6.019779 TGCAACAAGGAACAAATGGTATAC 57.980 37.500 0.00 0.00 0.00 1.47
4475 4847 5.047660 TGCAACAAGGAACAAATGGTATACC 60.048 40.000 15.50 15.50 0.00 2.73
4476 4848 5.185056 GCAACAAGGAACAAATGGTATACCT 59.815 40.000 22.41 5.81 36.82 3.08
4478 4850 6.388619 ACAAGGAACAAATGGTATACCTCT 57.611 37.500 22.41 7.54 36.82 3.69
4480 4852 5.632034 AGGAACAAATGGTATACCTCTCC 57.368 43.478 22.41 16.52 36.82 3.71
4481 4853 5.036916 AGGAACAAATGGTATACCTCTCCA 58.963 41.667 22.41 2.33 36.82 3.86
4482 4854 5.672194 AGGAACAAATGGTATACCTCTCCAT 59.328 40.000 22.41 4.77 42.82 3.41
4483 4855 6.849697 AGGAACAAATGGTATACCTCTCCATA 59.150 38.462 22.41 0.72 40.52 2.74
4484 4856 7.016661 AGGAACAAATGGTATACCTCTCCATAG 59.983 40.741 22.41 6.76 40.52 2.23
4495 4867 9.577222 GTATACCTCTCCATAGTCCCTAATATC 57.423 40.741 0.00 0.00 0.00 1.63
4544 4916 1.365633 GGAGCAGATCTAGGGTGCG 59.634 63.158 0.00 0.00 42.26 5.34
4550 4922 0.259065 AGATCTAGGGTGCGACCTGA 59.741 55.000 9.11 5.46 42.02 3.86
4575 4947 4.096984 CCTGCTGAAGGTGATTATGGAAAC 59.903 45.833 0.00 0.00 41.74 2.78
4577 4949 4.943705 TGCTGAAGGTGATTATGGAAACTC 59.056 41.667 0.00 0.00 0.00 3.01
4578 4950 5.189180 GCTGAAGGTGATTATGGAAACTCT 58.811 41.667 0.00 0.00 0.00 3.24
4580 4952 6.404074 GCTGAAGGTGATTATGGAAACTCTTG 60.404 42.308 0.00 0.00 0.00 3.02
4581 4953 5.415701 TGAAGGTGATTATGGAAACTCTTGC 59.584 40.000 0.00 0.00 0.00 4.01
4583 4955 4.018050 AGGTGATTATGGAAACTCTTGCCT 60.018 41.667 0.00 0.00 0.00 4.75
4584 4956 5.191722 AGGTGATTATGGAAACTCTTGCCTA 59.808 40.000 0.00 0.00 0.00 3.93
4594 4968 6.599244 TGGAAACTCTTGCCTATGTTGATTAG 59.401 38.462 0.00 0.00 0.00 1.73
4602 4976 5.565509 TGCCTATGTTGATTAGTTTGTGGA 58.434 37.500 0.00 0.00 0.00 4.02
4607 4981 6.743575 ATGTTGATTAGTTTGTGGAGTAGC 57.256 37.500 0.00 0.00 0.00 3.58
4622 4996 4.951715 TGGAGTAGCAGGAACGTTAATAGA 59.048 41.667 0.00 0.00 0.00 1.98
4631 5005 6.129168 GCAGGAACGTTAATAGATCGTGTATG 60.129 42.308 0.00 0.00 37.85 2.39
4641 5015 3.501349 AGATCGTGTATGCTCCCTATGT 58.499 45.455 0.00 0.00 0.00 2.29
4690 5064 8.894768 ATGGAGTGTATATCTTTTGAGCTTAC 57.105 34.615 0.00 0.00 0.00 2.34
4710 5270 2.428890 ACTCATGTTAGAAGAGAGGCCG 59.571 50.000 0.00 0.00 33.69 6.13
4725 5285 4.308526 CCGAAATGGCTGCTCACT 57.691 55.556 0.00 0.00 0.00 3.41
4738 5298 1.946768 TGCTCACTACACAGCCAAAAC 59.053 47.619 0.00 0.00 34.47 2.43
4739 5299 2.222027 GCTCACTACACAGCCAAAACT 58.778 47.619 0.00 0.00 0.00 2.66
4741 5301 1.946768 TCACTACACAGCCAAAACTGC 59.053 47.619 0.00 0.00 41.60 4.40
4761 5321 2.415893 GCCTCCAAATCGAATGTTGTGG 60.416 50.000 0.00 1.08 0.00 4.17
4810 5377 2.777114 TCCTAAATGCCTGTATCCAGCA 59.223 45.455 0.00 0.00 37.38 4.41
4836 5403 5.411831 TTCTCATGCTGACAGTGAGTAAT 57.588 39.130 17.89 0.00 40.13 1.89
4837 5404 6.530019 TTCTCATGCTGACAGTGAGTAATA 57.470 37.500 17.89 2.06 40.13 0.98
4838 5405 5.895928 TCTCATGCTGACAGTGAGTAATAC 58.104 41.667 17.89 0.00 40.13 1.89
4839 5406 4.672409 TCATGCTGACAGTGAGTAATACG 58.328 43.478 3.99 0.00 0.00 3.06
4900 5467 1.940613 GGTGTGAACCTGTCTTGTCAC 59.059 52.381 0.00 0.00 0.00 3.67
4935 5502 3.181440 TGACATGCATAAGAAGGGGATCC 60.181 47.826 1.92 1.92 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.613977 GCCAACCGGATAGATGGATCTG 60.614 54.545 9.46 0.00 37.76 2.90
5 6 1.625818 GCCAACCGGATAGATGGATCT 59.374 52.381 9.46 0.00 40.86 2.75
6 7 1.625818 AGCCAACCGGATAGATGGATC 59.374 52.381 9.46 0.00 34.82 3.36
7 8 1.734655 AGCCAACCGGATAGATGGAT 58.265 50.000 9.46 4.04 34.82 3.41
8 9 1.140852 CAAGCCAACCGGATAGATGGA 59.859 52.381 9.46 0.00 34.82 3.41
9 10 1.134098 ACAAGCCAACCGGATAGATGG 60.134 52.381 9.46 9.51 36.00 3.51
10 11 2.332063 ACAAGCCAACCGGATAGATG 57.668 50.000 9.46 2.11 0.00 2.90
11 12 2.643551 CAACAAGCCAACCGGATAGAT 58.356 47.619 9.46 0.00 0.00 1.98
12 13 1.339631 CCAACAAGCCAACCGGATAGA 60.340 52.381 9.46 0.00 0.00 1.98
13 14 1.094785 CCAACAAGCCAACCGGATAG 58.905 55.000 9.46 0.00 0.00 2.08
14 15 0.402504 ACCAACAAGCCAACCGGATA 59.597 50.000 9.46 0.00 0.00 2.59
15 16 1.152830 ACCAACAAGCCAACCGGAT 59.847 52.632 9.46 0.00 0.00 4.18
16 17 1.826054 CACCAACAAGCCAACCGGA 60.826 57.895 9.46 0.00 0.00 5.14
17 18 2.124693 ACACCAACAAGCCAACCGG 61.125 57.895 0.00 0.00 0.00 5.28
18 19 1.065600 CACACCAACAAGCCAACCG 59.934 57.895 0.00 0.00 0.00 4.44
19 20 1.336755 CTACACACCAACAAGCCAACC 59.663 52.381 0.00 0.00 0.00 3.77
20 21 2.290641 CTCTACACACCAACAAGCCAAC 59.709 50.000 0.00 0.00 0.00 3.77
21 22 2.092646 ACTCTACACACCAACAAGCCAA 60.093 45.455 0.00 0.00 0.00 4.52
22 23 1.488812 ACTCTACACACCAACAAGCCA 59.511 47.619 0.00 0.00 0.00 4.75
23 24 1.873591 CACTCTACACACCAACAAGCC 59.126 52.381 0.00 0.00 0.00 4.35
24 25 2.287915 CACACTCTACACACCAACAAGC 59.712 50.000 0.00 0.00 0.00 4.01
25 26 2.872245 CCACACTCTACACACCAACAAG 59.128 50.000 0.00 0.00 0.00 3.16
26 27 2.502130 TCCACACTCTACACACCAACAA 59.498 45.455 0.00 0.00 0.00 2.83
27 28 2.112190 TCCACACTCTACACACCAACA 58.888 47.619 0.00 0.00 0.00 3.33
28 29 2.159014 TGTCCACACTCTACACACCAAC 60.159 50.000 0.00 0.00 0.00 3.77
29 30 2.112190 TGTCCACACTCTACACACCAA 58.888 47.619 0.00 0.00 0.00 3.67
30 31 1.411246 GTGTCCACACTCTACACACCA 59.589 52.381 2.41 0.00 42.40 4.17
31 32 1.602165 CGTGTCCACACTCTACACACC 60.602 57.143 8.19 0.00 42.87 4.16
32 33 1.066605 ACGTGTCCACACTCTACACAC 59.933 52.381 8.19 0.00 42.87 3.82
33 34 1.066454 CACGTGTCCACACTCTACACA 59.934 52.381 7.58 0.00 42.87 3.72
34 35 1.602165 CCACGTGTCCACACTCTACAC 60.602 57.143 15.65 0.00 44.34 2.90
35 36 0.671796 CCACGTGTCCACACTCTACA 59.328 55.000 15.65 0.00 44.34 2.74
36 37 0.956633 TCCACGTGTCCACACTCTAC 59.043 55.000 15.65 0.00 44.34 2.59
37 38 1.244816 CTCCACGTGTCCACACTCTA 58.755 55.000 15.65 0.00 44.34 2.43
38 39 1.464376 CCTCCACGTGTCCACACTCT 61.464 60.000 15.65 0.00 44.34 3.24
39 40 1.006102 CCTCCACGTGTCCACACTC 60.006 63.158 15.65 0.00 44.34 3.51
40 41 3.138625 CCTCCACGTGTCCACACT 58.861 61.111 15.65 0.00 44.34 3.55
41 42 2.665185 GCCTCCACGTGTCCACAC 60.665 66.667 15.65 0.00 43.15 3.82
42 43 3.936203 GGCCTCCACGTGTCCACA 61.936 66.667 15.65 0.00 0.00 4.17
43 44 3.883744 CTGGCCTCCACGTGTCCAC 62.884 68.421 15.65 0.93 0.00 4.02
44 45 3.625897 CTGGCCTCCACGTGTCCA 61.626 66.667 15.65 14.09 0.00 4.02
46 47 2.564553 CTAGCTGGCCTCCACGTGTC 62.565 65.000 15.65 0.33 0.00 3.67
47 48 2.603473 TAGCTGGCCTCCACGTGT 60.603 61.111 15.65 0.00 0.00 4.49
48 49 2.185350 CTAGCTGGCCTCCACGTG 59.815 66.667 9.08 9.08 0.00 4.49
49 50 2.856039 TAGCTAGCTGGCCTCCACGT 62.856 60.000 27.68 0.20 0.00 4.49
50 51 2.081425 CTAGCTAGCTGGCCTCCACG 62.081 65.000 27.68 0.00 0.00 4.94
51 52 1.745264 CTAGCTAGCTGGCCTCCAC 59.255 63.158 27.68 0.00 0.00 4.02
52 53 1.458398 CCTAGCTAGCTGGCCTCCA 60.458 63.158 27.68 4.07 0.00 3.86
53 54 1.458588 ACCTAGCTAGCTGGCCTCC 60.459 63.158 27.68 0.00 0.00 4.30
54 55 1.745264 CACCTAGCTAGCTGGCCTC 59.255 63.158 27.68 0.00 0.00 4.70
55 56 1.764054 CCACCTAGCTAGCTGGCCT 60.764 63.158 27.68 9.01 0.00 5.19
56 57 0.759436 TACCACCTAGCTAGCTGGCC 60.759 60.000 28.08 0.00 33.29 5.36
57 58 0.676736 CTACCACCTAGCTAGCTGGC 59.323 60.000 28.08 15.23 33.29 4.85
58 59 2.074729 ACTACCACCTAGCTAGCTGG 57.925 55.000 27.00 27.00 35.60 4.85
59 60 3.318557 GGTAACTACCACCTAGCTAGCTG 59.681 52.174 27.68 13.96 45.73 4.24
60 61 3.564264 GGTAACTACCACCTAGCTAGCT 58.436 50.000 23.12 23.12 45.73 3.32
72 73 8.726870 TTTATCTACAAGCAATGGTAACTACC 57.273 34.615 0.00 0.00 46.62 3.18
77 78 9.868277 CCAAATTTTATCTACAAGCAATGGTAA 57.132 29.630 0.00 0.00 0.00 2.85
78 79 9.030452 ACCAAATTTTATCTACAAGCAATGGTA 57.970 29.630 0.00 0.00 33.47 3.25
79 80 7.906327 ACCAAATTTTATCTACAAGCAATGGT 58.094 30.769 0.00 0.00 0.00 3.55
80 81 9.868277 TTACCAAATTTTATCTACAAGCAATGG 57.132 29.630 0.00 0.00 0.00 3.16
91 92 9.088987 ACCACACATCTTTACCAAATTTTATCT 57.911 29.630 0.00 0.00 0.00 1.98
92 93 9.705290 AACCACACATCTTTACCAAATTTTATC 57.295 29.630 0.00 0.00 0.00 1.75
93 94 9.705290 GAACCACACATCTTTACCAAATTTTAT 57.295 29.630 0.00 0.00 0.00 1.40
94 95 8.696374 TGAACCACACATCTTTACCAAATTTTA 58.304 29.630 0.00 0.00 0.00 1.52
95 96 7.560368 TGAACCACACATCTTTACCAAATTTT 58.440 30.769 0.00 0.00 0.00 1.82
96 97 7.118496 TGAACCACACATCTTTACCAAATTT 57.882 32.000 0.00 0.00 0.00 1.82
97 98 6.723298 TGAACCACACATCTTTACCAAATT 57.277 33.333 0.00 0.00 0.00 1.82
98 99 6.723298 TTGAACCACACATCTTTACCAAAT 57.277 33.333 0.00 0.00 0.00 2.32
99 100 6.531503 TTTGAACCACACATCTTTACCAAA 57.468 33.333 0.00 0.00 0.00 3.28
100 101 6.531503 TTTTGAACCACACATCTTTACCAA 57.468 33.333 0.00 0.00 0.00 3.67
101 102 6.531503 TTTTTGAACCACACATCTTTACCA 57.468 33.333 0.00 0.00 0.00 3.25
123 124 6.183360 CGAGAGAAAGGGGAGTTTTTCTTTTT 60.183 38.462 1.53 0.00 42.13 1.94
124 125 5.299531 CGAGAGAAAGGGGAGTTTTTCTTTT 59.700 40.000 1.53 0.00 42.13 2.27
125 126 4.822350 CGAGAGAAAGGGGAGTTTTTCTTT 59.178 41.667 1.53 0.00 42.13 2.52
126 127 4.390264 CGAGAGAAAGGGGAGTTTTTCTT 58.610 43.478 1.53 0.00 42.13 2.52
127 128 3.244596 CCGAGAGAAAGGGGAGTTTTTCT 60.245 47.826 0.00 0.00 44.10 2.52
128 129 3.075148 CCGAGAGAAAGGGGAGTTTTTC 58.925 50.000 0.00 0.00 34.34 2.29
129 130 2.814469 GCCGAGAGAAAGGGGAGTTTTT 60.814 50.000 0.00 0.00 0.00 1.94
130 131 1.271434 GCCGAGAGAAAGGGGAGTTTT 60.271 52.381 0.00 0.00 0.00 2.43
131 132 0.325272 GCCGAGAGAAAGGGGAGTTT 59.675 55.000 0.00 0.00 0.00 2.66
132 133 1.554583 GGCCGAGAGAAAGGGGAGTT 61.555 60.000 0.00 0.00 0.00 3.01
133 134 1.990614 GGCCGAGAGAAAGGGGAGT 60.991 63.158 0.00 0.00 0.00 3.85
134 135 1.681486 GAGGCCGAGAGAAAGGGGAG 61.681 65.000 0.00 0.00 0.00 4.30
135 136 1.686110 GAGGCCGAGAGAAAGGGGA 60.686 63.158 0.00 0.00 0.00 4.81
136 137 1.268283 AAGAGGCCGAGAGAAAGGGG 61.268 60.000 0.00 0.00 0.00 4.79
137 138 0.176910 GAAGAGGCCGAGAGAAAGGG 59.823 60.000 0.00 0.00 0.00 3.95
138 139 0.176910 GGAAGAGGCCGAGAGAAAGG 59.823 60.000 0.00 0.00 0.00 3.11
139 140 0.176910 GGGAAGAGGCCGAGAGAAAG 59.823 60.000 0.00 0.00 0.00 2.62
140 141 1.265454 GGGGAAGAGGCCGAGAGAAA 61.265 60.000 0.00 0.00 0.00 2.52
141 142 1.686110 GGGGAAGAGGCCGAGAGAA 60.686 63.158 0.00 0.00 0.00 2.87
287 291 2.434884 AATGGCGACCTGCGTCTG 60.435 61.111 0.00 0.00 46.81 3.51
366 373 4.816984 GTCGCTCCCTCTCCCGGA 62.817 72.222 0.73 0.00 0.00 5.14
405 412 3.630312 TGCGGCAAAAATAATACCTCTCC 59.370 43.478 0.00 0.00 0.00 3.71
417 429 2.903547 GAGAGCGGTGCGGCAAAAA 61.904 57.895 3.23 0.00 34.64 1.94
429 441 2.500509 ATAAGCGGAAGAAGAGAGCG 57.499 50.000 0.00 0.00 0.00 5.03
530 549 4.566488 GCTGTATCTCCATTTCATAGGGGG 60.566 50.000 0.00 0.00 0.00 5.40
531 550 4.566488 GGCTGTATCTCCATTTCATAGGGG 60.566 50.000 0.00 0.00 0.00 4.79
532 551 4.583871 GGCTGTATCTCCATTTCATAGGG 58.416 47.826 0.00 0.00 0.00 3.53
544 564 0.249489 AATCCGTGCGGCTGTATCTC 60.249 55.000 5.64 0.00 34.68 2.75
548 568 1.153647 CAGAATCCGTGCGGCTGTA 60.154 57.895 5.64 0.00 34.68 2.74
574 594 9.495572 GGAATCAGGAAAATAACAGTATCCTAG 57.504 37.037 0.00 0.00 38.44 3.02
586 606 5.304686 ACTATGGCGGAATCAGGAAAATA 57.695 39.130 0.00 0.00 0.00 1.40
612 632 1.831389 AATGACGAGCGTGTGTGCAC 61.831 55.000 10.75 10.75 41.97 4.57
622 642 3.454375 TCTAAATCGGGAAATGACGAGC 58.546 45.455 0.00 0.00 42.89 5.03
636 656 6.212955 GTGGCTGTGTCTAGATCTCTAAATC 58.787 44.000 0.00 0.00 0.00 2.17
664 684 1.269413 GCACTTCACAACAGCTTGCAT 60.269 47.619 0.00 0.00 0.00 3.96
674 694 3.016031 TGCAAAAGAGAGCACTTCACAA 58.984 40.909 0.00 0.00 35.51 3.33
680 700 8.115490 AGTTTATTTATGCAAAAGAGAGCACT 57.885 30.769 0.00 0.00 44.49 4.40
723 860 5.195379 CGGAACTAAAACAACGACAAGAAG 58.805 41.667 0.00 0.00 0.00 2.85
726 863 4.525411 ACGGAACTAAAACAACGACAAG 57.475 40.909 0.00 0.00 0.00 3.16
752 889 0.685097 TGCTGGGTGTACAGAGTTCC 59.315 55.000 0.00 0.00 40.97 3.62
769 906 7.170320 CCTGGATTGAATTTTGCATTATACTGC 59.830 37.037 8.06 8.06 42.62 4.40
770 907 7.654520 CCCTGGATTGAATTTTGCATTATACTG 59.345 37.037 0.00 0.00 0.00 2.74
772 909 6.424812 GCCCTGGATTGAATTTTGCATTATAC 59.575 38.462 0.00 0.00 0.00 1.47
774 911 5.104444 TGCCCTGGATTGAATTTTGCATTAT 60.104 36.000 0.00 0.00 0.00 1.28
775 912 4.224594 TGCCCTGGATTGAATTTTGCATTA 59.775 37.500 0.00 0.00 0.00 1.90
776 913 3.009253 TGCCCTGGATTGAATTTTGCATT 59.991 39.130 0.00 0.00 0.00 3.56
778 915 1.976404 TGCCCTGGATTGAATTTTGCA 59.024 42.857 0.00 0.00 0.00 4.08
779 916 2.766345 TGCCCTGGATTGAATTTTGC 57.234 45.000 0.00 0.00 0.00 3.68
792 929 3.009275 TGGATCCACCATGCCCTG 58.991 61.111 11.44 0.00 44.64 4.45
801 938 5.422012 ACCAATATTTGAAACCTGGATCCAC 59.578 40.000 11.44 0.63 0.00 4.02
802 939 5.588845 ACCAATATTTGAAACCTGGATCCA 58.411 37.500 15.27 15.27 0.00 3.41
803 940 6.040504 GGTACCAATATTTGAAACCTGGATCC 59.959 42.308 7.15 4.20 34.43 3.36
804 941 6.238648 CGGTACCAATATTTGAAACCTGGATC 60.239 42.308 13.54 0.00 34.82 3.36
807 944 4.944930 TCGGTACCAATATTTGAAACCTGG 59.055 41.667 13.54 0.00 34.82 4.45
809 946 4.638865 GCTCGGTACCAATATTTGAAACCT 59.361 41.667 13.54 0.00 34.82 3.50
811 948 4.201980 GGGCTCGGTACCAATATTTGAAAC 60.202 45.833 13.54 0.00 0.00 2.78
812 949 3.949113 GGGCTCGGTACCAATATTTGAAA 59.051 43.478 13.54 0.00 0.00 2.69
813 950 3.201266 AGGGCTCGGTACCAATATTTGAA 59.799 43.478 13.54 0.00 0.00 2.69
814 951 2.775384 AGGGCTCGGTACCAATATTTGA 59.225 45.455 13.54 0.00 0.00 2.69
815 952 2.878406 CAGGGCTCGGTACCAATATTTG 59.122 50.000 13.54 0.00 0.00 2.32
816 953 2.158667 CCAGGGCTCGGTACCAATATTT 60.159 50.000 13.54 0.00 0.00 1.40
817 954 1.420138 CCAGGGCTCGGTACCAATATT 59.580 52.381 13.54 0.00 0.00 1.28
818 955 1.056660 CCAGGGCTCGGTACCAATAT 58.943 55.000 13.54 0.00 0.00 1.28
819 956 0.325860 ACCAGGGCTCGGTACCAATA 60.326 55.000 13.54 0.00 34.02 1.90
820 957 1.205460 AACCAGGGCTCGGTACCAAT 61.205 55.000 13.54 0.00 34.99 3.16
821 958 1.833787 GAACCAGGGCTCGGTACCAA 61.834 60.000 13.54 0.00 34.99 3.67
855 992 5.262588 AGTGAAACAAATTCTGGGAACAC 57.737 39.130 0.00 0.00 41.43 3.32
892 1032 4.081406 TGCCAGCACAGTAATGAAGATTT 58.919 39.130 0.00 0.00 0.00 2.17
893 1033 3.689347 TGCCAGCACAGTAATGAAGATT 58.311 40.909 0.00 0.00 0.00 2.40
894 1034 3.276857 CTGCCAGCACAGTAATGAAGAT 58.723 45.455 0.00 0.00 32.78 2.40
895 1035 2.703416 CTGCCAGCACAGTAATGAAGA 58.297 47.619 0.00 0.00 32.78 2.87
896 1036 1.131883 GCTGCCAGCACAGTAATGAAG 59.868 52.381 12.82 0.00 41.89 3.02
897 1037 1.167851 GCTGCCAGCACAGTAATGAA 58.832 50.000 12.82 0.00 41.89 2.57
898 1038 1.020861 CGCTGCCAGCACAGTAATGA 61.021 55.000 18.21 0.00 42.58 2.57
899 1039 1.020861 TCGCTGCCAGCACAGTAATG 61.021 55.000 18.21 0.00 42.58 1.90
905 1045 3.244281 ATCACTCGCTGCCAGCACA 62.244 57.895 18.21 0.91 42.58 4.57
976 1116 1.073284 TGAAAAAGAAGCCGCCCTAGT 59.927 47.619 0.00 0.00 0.00 2.57
979 1119 0.110486 TCTGAAAAAGAAGCCGCCCT 59.890 50.000 0.00 0.00 29.54 5.19
984 1124 6.324561 AGAAACATCTCTGAAAAAGAAGCC 57.675 37.500 0.00 0.00 33.37 4.35
992 1132 5.247110 AGCAGACCTAGAAACATCTCTGAAA 59.753 40.000 0.00 0.00 0.00 2.69
1028 1168 2.159057 GCTAGCAATTTTCCATGTGGGG 60.159 50.000 10.63 0.00 37.22 4.96
1104 1244 2.586079 CCCATGCGTACCTGCTCG 60.586 66.667 0.00 0.00 35.36 5.03
1118 1258 3.553922 GCAAAAATGTCGGATTCAACCCA 60.554 43.478 0.00 0.00 0.00 4.51
1128 1268 1.336440 TCACACAGGCAAAAATGTCGG 59.664 47.619 0.00 0.00 0.00 4.79
1129 1269 2.772568 TCACACAGGCAAAAATGTCG 57.227 45.000 0.00 0.00 0.00 4.35
1130 1270 4.874970 AGAATCACACAGGCAAAAATGTC 58.125 39.130 0.00 0.00 0.00 3.06
1133 1273 4.518970 ACGTAGAATCACACAGGCAAAAAT 59.481 37.500 0.00 0.00 0.00 1.82
1143 1283 4.201685 CGAAAATCCCACGTAGAATCACAC 60.202 45.833 0.00 0.00 0.00 3.82
1166 1306 7.119605 TCAGCAATGCAAAACAAATTATGTC 57.880 32.000 8.35 0.00 42.99 3.06
1170 1310 8.151141 TGAATTCAGCAATGCAAAACAAATTA 57.849 26.923 8.35 0.00 0.00 1.40
1172 1312 6.621316 TGAATTCAGCAATGCAAAACAAAT 57.379 29.167 8.35 0.00 0.00 2.32
1213 1353 5.395104 GCTCGAGCTACACCTCATACAGG 62.395 56.522 29.88 0.00 42.60 4.00
1214 1354 2.287308 GCTCGAGCTACACCTCATACAG 60.287 54.545 29.88 0.00 38.21 2.74
1215 1355 1.676529 GCTCGAGCTACACCTCATACA 59.323 52.381 29.88 0.00 38.21 2.29
1216 1356 1.676529 TGCTCGAGCTACACCTCATAC 59.323 52.381 35.27 4.97 42.66 2.39
1217 1357 1.950216 CTGCTCGAGCTACACCTCATA 59.050 52.381 35.27 12.40 42.66 2.15
1218 1358 0.743688 CTGCTCGAGCTACACCTCAT 59.256 55.000 35.27 0.00 42.66 2.90
1219 1359 0.322546 TCTGCTCGAGCTACACCTCA 60.323 55.000 35.27 13.87 42.66 3.86
1220 1360 0.811915 TTCTGCTCGAGCTACACCTC 59.188 55.000 35.27 7.21 42.66 3.85
1221 1361 1.257743 TTTCTGCTCGAGCTACACCT 58.742 50.000 35.27 0.00 42.66 4.00
1222 1362 2.301577 ATTTCTGCTCGAGCTACACC 57.698 50.000 35.27 8.73 42.66 4.16
1223 1363 3.254060 TCAATTTCTGCTCGAGCTACAC 58.746 45.455 35.27 9.49 42.66 2.90
1224 1364 3.592898 TCAATTTCTGCTCGAGCTACA 57.407 42.857 35.27 18.44 42.66 2.74
1225 1365 5.476752 AAATCAATTTCTGCTCGAGCTAC 57.523 39.130 35.27 10.26 42.66 3.58
1226 1366 5.163723 CCAAAATCAATTTCTGCTCGAGCTA 60.164 40.000 35.27 22.00 42.66 3.32
1227 1367 4.380233 CCAAAATCAATTTCTGCTCGAGCT 60.380 41.667 35.27 14.66 42.66 4.09
1228 1368 3.855950 CCAAAATCAATTTCTGCTCGAGC 59.144 43.478 30.42 30.42 42.50 5.03
1229 1369 5.051891 ACCAAAATCAATTTCTGCTCGAG 57.948 39.130 8.45 8.45 0.00 4.04
1230 1370 5.937540 TCTACCAAAATCAATTTCTGCTCGA 59.062 36.000 0.00 0.00 0.00 4.04
1231 1371 6.182039 TCTACCAAAATCAATTTCTGCTCG 57.818 37.500 0.00 0.00 0.00 5.03
1232 1372 7.765307 TGATCTACCAAAATCAATTTCTGCTC 58.235 34.615 0.00 0.00 0.00 4.26
1233 1373 7.707624 TGATCTACCAAAATCAATTTCTGCT 57.292 32.000 0.00 0.00 0.00 4.24
1234 1374 7.650903 GGATGATCTACCAAAATCAATTTCTGC 59.349 37.037 0.00 0.00 35.64 4.26
1235 1375 7.859377 CGGATGATCTACCAAAATCAATTTCTG 59.141 37.037 8.86 0.00 35.64 3.02
1236 1376 7.469181 GCGGATGATCTACCAAAATCAATTTCT 60.469 37.037 8.86 0.00 35.64 2.52
1237 1377 6.638468 GCGGATGATCTACCAAAATCAATTTC 59.362 38.462 8.86 0.00 35.64 2.17
1238 1378 6.322201 AGCGGATGATCTACCAAAATCAATTT 59.678 34.615 8.86 0.00 35.64 1.82
1239 1379 5.829924 AGCGGATGATCTACCAAAATCAATT 59.170 36.000 8.86 0.00 35.64 2.32
1240 1380 5.380043 AGCGGATGATCTACCAAAATCAAT 58.620 37.500 8.86 0.00 35.64 2.57
1241 1381 4.780815 AGCGGATGATCTACCAAAATCAA 58.219 39.130 8.86 0.00 35.64 2.57
1242 1382 4.422073 AGCGGATGATCTACCAAAATCA 57.578 40.909 8.86 0.00 36.40 2.57
1243 1383 5.757850 AAAGCGGATGATCTACCAAAATC 57.242 39.130 8.86 0.00 0.00 2.17
1244 1384 5.888161 AGAAAAGCGGATGATCTACCAAAAT 59.112 36.000 8.86 0.00 0.00 1.82
1245 1385 5.123820 CAGAAAAGCGGATGATCTACCAAAA 59.876 40.000 8.86 0.00 0.00 2.44
1246 1386 4.635765 CAGAAAAGCGGATGATCTACCAAA 59.364 41.667 8.86 0.00 0.00 3.28
1247 1387 4.191544 CAGAAAAGCGGATGATCTACCAA 58.808 43.478 8.86 0.00 0.00 3.67
1248 1388 3.197766 ACAGAAAAGCGGATGATCTACCA 59.802 43.478 8.86 0.00 0.00 3.25
1249 1389 3.557595 CACAGAAAAGCGGATGATCTACC 59.442 47.826 0.00 0.00 0.00 3.18
1250 1390 4.033358 CACACAGAAAAGCGGATGATCTAC 59.967 45.833 0.00 0.00 0.00 2.59
1251 1391 4.183865 CACACAGAAAAGCGGATGATCTA 58.816 43.478 0.00 0.00 0.00 1.98
1252 1392 3.005554 CACACAGAAAAGCGGATGATCT 58.994 45.455 0.00 0.00 0.00 2.75
1253 1393 2.744202 ACACACAGAAAAGCGGATGATC 59.256 45.455 0.00 0.00 0.00 2.92
1254 1394 2.485426 CACACACAGAAAAGCGGATGAT 59.515 45.455 0.00 0.00 0.00 2.45
1255 1395 1.872952 CACACACAGAAAAGCGGATGA 59.127 47.619 0.00 0.00 0.00 2.92
1256 1396 1.603802 ACACACACAGAAAAGCGGATG 59.396 47.619 0.00 0.00 0.00 3.51
1257 1397 1.603802 CACACACACAGAAAAGCGGAT 59.396 47.619 0.00 0.00 0.00 4.18
1258 1398 1.013596 CACACACACAGAAAAGCGGA 58.986 50.000 0.00 0.00 0.00 5.54
1259 1399 0.732571 ACACACACACAGAAAAGCGG 59.267 50.000 0.00 0.00 0.00 5.52
1260 1400 1.130373 ACACACACACACAGAAAAGCG 59.870 47.619 0.00 0.00 0.00 4.68
1261 1401 2.518949 CACACACACACACAGAAAAGC 58.481 47.619 0.00 0.00 0.00 3.51
1262 1402 2.518949 GCACACACACACACAGAAAAG 58.481 47.619 0.00 0.00 0.00 2.27
1263 1403 1.135831 CGCACACACACACACAGAAAA 60.136 47.619 0.00 0.00 0.00 2.29
1264 1404 0.445829 CGCACACACACACACAGAAA 59.554 50.000 0.00 0.00 0.00 2.52
1265 1405 1.976478 GCGCACACACACACACAGAA 61.976 55.000 0.30 0.00 0.00 3.02
1266 1406 2.460275 GCGCACACACACACACAGA 61.460 57.895 0.30 0.00 0.00 3.41
1267 1407 2.023181 GCGCACACACACACACAG 59.977 61.111 0.30 0.00 0.00 3.66
1268 1408 3.858989 CGCGCACACACACACACA 61.859 61.111 8.75 0.00 0.00 3.72
1285 1425 2.763929 GCAACAATTACGCGCGTGC 61.764 57.895 42.78 31.15 37.91 5.34
1286 1426 2.143458 GGCAACAATTACGCGCGTG 61.143 57.895 42.78 28.89 0.00 5.34
1287 1427 2.174835 GGCAACAATTACGCGCGT 59.825 55.556 39.05 39.05 0.00 6.01
1288 1428 1.580132 GAGGCAACAATTACGCGCG 60.580 57.895 30.96 30.96 41.41 6.86
1289 1429 1.226295 GGAGGCAACAATTACGCGC 60.226 57.895 5.73 0.00 41.41 6.86
1290 1430 0.732571 ATGGAGGCAACAATTACGCG 59.267 50.000 3.53 3.53 41.41 6.01
1291 1431 5.411361 TCATATATGGAGGCAACAATTACGC 59.589 40.000 12.78 0.00 41.41 4.42
1292 1432 7.433708 TTCATATATGGAGGCAACAATTACG 57.566 36.000 12.78 0.00 41.41 3.18
1296 1436 8.472413 GCATTATTCATATATGGAGGCAACAAT 58.528 33.333 12.78 5.31 41.41 2.71
1297 1437 7.670979 AGCATTATTCATATATGGAGGCAACAA 59.329 33.333 12.78 0.00 41.41 2.83
1298 1438 7.121611 CAGCATTATTCATATATGGAGGCAACA 59.878 37.037 12.78 0.00 41.41 3.33
1299 1439 7.337689 TCAGCATTATTCATATATGGAGGCAAC 59.662 37.037 12.78 0.00 0.00 4.17
1300 1440 7.404481 TCAGCATTATTCATATATGGAGGCAA 58.596 34.615 12.78 0.00 0.00 4.52
1301 1441 6.961042 TCAGCATTATTCATATATGGAGGCA 58.039 36.000 12.78 0.00 0.00 4.75
1302 1442 7.870509 TTCAGCATTATTCATATATGGAGGC 57.129 36.000 12.78 9.56 0.00 4.70
1309 1449 9.382275 ACGCACATATTCAGCATTATTCATATA 57.618 29.630 0.00 0.00 0.00 0.86
1310 1450 8.272545 ACGCACATATTCAGCATTATTCATAT 57.727 30.769 0.00 0.00 0.00 1.78
1311 1451 7.671495 ACGCACATATTCAGCATTATTCATA 57.329 32.000 0.00 0.00 0.00 2.15
1312 1452 6.564709 ACGCACATATTCAGCATTATTCAT 57.435 33.333 0.00 0.00 0.00 2.57
1313 1453 7.489574 TTACGCACATATTCAGCATTATTCA 57.510 32.000 0.00 0.00 0.00 2.57
1314 1454 8.955061 AATTACGCACATATTCAGCATTATTC 57.045 30.769 0.00 0.00 0.00 1.75
1317 1457 9.824534 CAATAATTACGCACATATTCAGCATTA 57.175 29.630 0.00 0.00 0.00 1.90
1318 1458 8.567104 TCAATAATTACGCACATATTCAGCATT 58.433 29.630 0.00 0.00 0.00 3.56
1319 1459 8.098220 TCAATAATTACGCACATATTCAGCAT 57.902 30.769 0.00 0.00 0.00 3.79
1320 1460 7.489574 TCAATAATTACGCACATATTCAGCA 57.510 32.000 0.00 0.00 0.00 4.41
1321 1461 8.229811 TCATCAATAATTACGCACATATTCAGC 58.770 33.333 0.00 0.00 0.00 4.26
1327 1467 9.705290 ACTACATCATCAATAATTACGCACATA 57.295 29.630 0.00 0.00 0.00 2.29
1328 1468 8.607441 ACTACATCATCAATAATTACGCACAT 57.393 30.769 0.00 0.00 0.00 3.21
1329 1469 8.334632 CAACTACATCATCAATAATTACGCACA 58.665 33.333 0.00 0.00 0.00 4.57
1330 1470 8.335356 ACAACTACATCATCAATAATTACGCAC 58.665 33.333 0.00 0.00 0.00 5.34
1331 1471 8.432110 ACAACTACATCATCAATAATTACGCA 57.568 30.769 0.00 0.00 0.00 5.24
1351 1491 9.953697 TGCTTGTACGAATTAAATTTTACAACT 57.046 25.926 0.00 0.00 32.37 3.16
1352 1492 9.983431 GTGCTTGTACGAATTAAATTTTACAAC 57.017 29.630 0.00 1.28 32.37 3.32
1353 1493 9.182933 GGTGCTTGTACGAATTAAATTTTACAA 57.817 29.630 0.00 3.57 33.58 2.41
1354 1494 8.350722 TGGTGCTTGTACGAATTAAATTTTACA 58.649 29.630 0.00 0.00 0.00 2.41
1355 1495 8.730970 TGGTGCTTGTACGAATTAAATTTTAC 57.269 30.769 0.00 0.00 0.00 2.01
1356 1496 9.915629 AATGGTGCTTGTACGAATTAAATTTTA 57.084 25.926 0.00 0.00 0.00 1.52
1357 1497 8.825667 AATGGTGCTTGTACGAATTAAATTTT 57.174 26.923 0.00 0.00 0.00 1.82
1358 1498 8.825667 AAATGGTGCTTGTACGAATTAAATTT 57.174 26.923 0.00 0.00 0.00 1.82
1359 1499 8.303876 AGAAATGGTGCTTGTACGAATTAAATT 58.696 29.630 0.00 0.00 0.00 1.82
1360 1500 7.826690 AGAAATGGTGCTTGTACGAATTAAAT 58.173 30.769 0.00 0.00 0.00 1.40
1361 1501 7.209471 AGAAATGGTGCTTGTACGAATTAAA 57.791 32.000 0.00 0.00 0.00 1.52
1362 1502 6.811253 AGAAATGGTGCTTGTACGAATTAA 57.189 33.333 0.00 0.00 0.00 1.40
1363 1503 6.348950 CCAAGAAATGGTGCTTGTACGAATTA 60.349 38.462 0.00 0.00 44.85 1.40
1364 1504 5.460646 CAAGAAATGGTGCTTGTACGAATT 58.539 37.500 0.00 0.00 37.35 2.17
1365 1505 4.082787 CCAAGAAATGGTGCTTGTACGAAT 60.083 41.667 0.00 0.00 44.85 3.34
1366 1506 3.252215 CCAAGAAATGGTGCTTGTACGAA 59.748 43.478 0.00 0.00 44.85 3.85
1367 1507 2.811431 CCAAGAAATGGTGCTTGTACGA 59.189 45.455 0.00 0.00 44.85 3.43
1368 1508 3.201726 CCAAGAAATGGTGCTTGTACG 57.798 47.619 0.00 0.00 44.85 3.67
1379 1519 3.967332 ATGCAAAGTCCCCAAGAAATG 57.033 42.857 0.00 0.00 0.00 2.32
1380 1520 6.441604 AGAAATATGCAAAGTCCCCAAGAAAT 59.558 34.615 0.00 0.00 0.00 2.17
1381 1521 5.779771 AGAAATATGCAAAGTCCCCAAGAAA 59.220 36.000 0.00 0.00 0.00 2.52
1382 1522 5.332743 AGAAATATGCAAAGTCCCCAAGAA 58.667 37.500 0.00 0.00 0.00 2.52
1383 1523 4.934356 AGAAATATGCAAAGTCCCCAAGA 58.066 39.130 0.00 0.00 0.00 3.02
1384 1524 5.413499 CAAGAAATATGCAAAGTCCCCAAG 58.587 41.667 0.00 0.00 0.00 3.61
1385 1525 4.322650 GCAAGAAATATGCAAAGTCCCCAA 60.323 41.667 0.00 0.00 43.29 4.12
1386 1526 3.195396 GCAAGAAATATGCAAAGTCCCCA 59.805 43.478 0.00 0.00 43.29 4.96
1387 1527 3.430790 GGCAAGAAATATGCAAAGTCCCC 60.431 47.826 0.00 0.00 45.60 4.81
1388 1528 3.195396 TGGCAAGAAATATGCAAAGTCCC 59.805 43.478 0.00 0.00 45.60 4.46
1389 1529 4.082026 AGTGGCAAGAAATATGCAAAGTCC 60.082 41.667 0.00 0.00 45.60 3.85
1390 1530 5.064441 AGTGGCAAGAAATATGCAAAGTC 57.936 39.130 0.00 0.00 45.60 3.01
1391 1531 5.473066 AAGTGGCAAGAAATATGCAAAGT 57.527 34.783 0.00 0.00 45.60 2.66
1392 1532 5.517770 GCTAAGTGGCAAGAAATATGCAAAG 59.482 40.000 0.00 0.00 45.60 2.77
1393 1533 5.410067 GCTAAGTGGCAAGAAATATGCAAA 58.590 37.500 0.00 0.00 45.60 3.68
1394 1534 4.438608 CGCTAAGTGGCAAGAAATATGCAA 60.439 41.667 0.00 0.00 45.60 4.08
1395 1535 3.065233 CGCTAAGTGGCAAGAAATATGCA 59.935 43.478 0.00 0.00 45.60 3.96
1396 1536 3.065371 ACGCTAAGTGGCAAGAAATATGC 59.935 43.478 0.00 0.00 43.08 3.14
1397 1537 4.882671 ACGCTAAGTGGCAAGAAATATG 57.117 40.909 0.00 0.00 0.00 1.78
1398 1538 4.941263 TCAACGCTAAGTGGCAAGAAATAT 59.059 37.500 0.00 0.00 0.00 1.28
1399 1539 4.320023 TCAACGCTAAGTGGCAAGAAATA 58.680 39.130 0.00 0.00 0.00 1.40
1400 1540 3.146066 TCAACGCTAAGTGGCAAGAAAT 58.854 40.909 0.00 0.00 0.00 2.17
1401 1541 2.566913 TCAACGCTAAGTGGCAAGAAA 58.433 42.857 0.00 0.00 0.00 2.52
1402 1542 2.248280 TCAACGCTAAGTGGCAAGAA 57.752 45.000 0.00 0.00 0.00 2.52
1403 1543 2.472695 ATCAACGCTAAGTGGCAAGA 57.527 45.000 0.00 0.00 0.00 3.02
1404 1544 4.882671 ATTATCAACGCTAAGTGGCAAG 57.117 40.909 0.00 0.00 0.00 4.01
1405 1545 5.637006 AAATTATCAACGCTAAGTGGCAA 57.363 34.783 0.00 0.00 0.00 4.52
1406 1546 5.878116 ACTAAATTATCAACGCTAAGTGGCA 59.122 36.000 0.00 0.00 0.00 4.92
1407 1547 6.359480 ACTAAATTATCAACGCTAAGTGGC 57.641 37.500 0.00 0.00 0.00 5.01
1408 1548 9.061610 CAAAACTAAATTATCAACGCTAAGTGG 57.938 33.333 0.00 0.00 0.00 4.00
1409 1549 9.820229 TCAAAACTAAATTATCAACGCTAAGTG 57.180 29.630 0.00 0.00 0.00 3.16
1410 1550 9.821662 GTCAAAACTAAATTATCAACGCTAAGT 57.178 29.630 0.00 0.00 0.00 2.24
1411 1551 9.820229 TGTCAAAACTAAATTATCAACGCTAAG 57.180 29.630 0.00 0.00 0.00 2.18
1425 1565 8.514594 CCTGCTGAGATTTATGTCAAAACTAAA 58.485 33.333 0.00 0.00 29.08 1.85
1426 1566 7.882791 TCCTGCTGAGATTTATGTCAAAACTAA 59.117 33.333 0.00 0.00 29.08 2.24
1427 1567 7.394016 TCCTGCTGAGATTTATGTCAAAACTA 58.606 34.615 0.00 0.00 29.08 2.24
1428 1568 6.240894 TCCTGCTGAGATTTATGTCAAAACT 58.759 36.000 0.00 0.00 29.08 2.66
1429 1569 6.500684 TCCTGCTGAGATTTATGTCAAAAC 57.499 37.500 0.00 0.00 29.08 2.43
1430 1570 7.707624 AATCCTGCTGAGATTTATGTCAAAA 57.292 32.000 0.00 0.00 29.59 2.44
1431 1571 7.177216 ACAAATCCTGCTGAGATTTATGTCAAA 59.823 33.333 14.85 0.00 40.98 2.69
1432 1572 6.660521 ACAAATCCTGCTGAGATTTATGTCAA 59.339 34.615 14.85 0.00 40.98 3.18
1433 1573 6.094464 CACAAATCCTGCTGAGATTTATGTCA 59.906 38.462 14.85 0.00 40.98 3.58
1434 1574 6.493116 CACAAATCCTGCTGAGATTTATGTC 58.507 40.000 14.85 0.00 40.98 3.06
1435 1575 5.163581 GCACAAATCCTGCTGAGATTTATGT 60.164 40.000 18.05 12.46 40.98 2.29
1436 1576 5.163591 TGCACAAATCCTGCTGAGATTTATG 60.164 40.000 15.18 15.18 40.98 1.90
1437 1577 4.951715 TGCACAAATCCTGCTGAGATTTAT 59.048 37.500 14.85 6.27 40.98 1.40
1438 1578 4.156556 GTGCACAAATCCTGCTGAGATTTA 59.843 41.667 13.17 3.44 40.98 1.40
1439 1579 3.057033 GTGCACAAATCCTGCTGAGATTT 60.057 43.478 13.17 11.55 43.11 2.17
1440 1580 2.490903 GTGCACAAATCCTGCTGAGATT 59.509 45.455 13.17 0.00 35.46 2.40
1441 1581 2.089980 GTGCACAAATCCTGCTGAGAT 58.910 47.619 13.17 0.00 35.53 2.75
1442 1582 1.527034 GTGCACAAATCCTGCTGAGA 58.473 50.000 13.17 0.00 35.53 3.27
1443 1583 0.524862 GGTGCACAAATCCTGCTGAG 59.475 55.000 20.43 0.00 35.53 3.35
1444 1584 0.895100 GGGTGCACAAATCCTGCTGA 60.895 55.000 20.43 0.00 35.53 4.26
1445 1585 1.180456 TGGGTGCACAAATCCTGCTG 61.180 55.000 20.43 0.00 35.53 4.41
1498 1638 5.063880 CAGTTAACTAGCACCAGAAAACCT 58.936 41.667 8.04 0.00 0.00 3.50
1499 1639 4.820173 ACAGTTAACTAGCACCAGAAAACC 59.180 41.667 8.04 0.00 0.00 3.27
1536 1676 5.438761 AGTTGTTAACATTGTGGCTCTTC 57.561 39.130 9.56 0.00 0.00 2.87
1559 1699 8.473358 ACCAAAATTTAAAGTAGTGCCTAAGT 57.527 30.769 0.00 0.00 0.00 2.24
1560 1700 9.406828 GAACCAAAATTTAAAGTAGTGCCTAAG 57.593 33.333 0.00 0.00 0.00 2.18
1561 1701 8.915036 TGAACCAAAATTTAAAGTAGTGCCTAA 58.085 29.630 0.00 0.00 0.00 2.69
1624 1769 5.364157 ACCTGAGCGGAACTAGAATTAGAAT 59.636 40.000 0.00 0.00 36.31 2.40
1643 1788 3.818965 TGGCTGCACCATACCTGA 58.181 55.556 0.50 0.00 46.36 3.86
1653 1798 4.562082 CAATTGAAAGATTTCTGGCTGCA 58.438 39.130 0.00 0.00 38.02 4.41
1693 1838 6.348498 CCGGGATATGCATCAGAAATGTATA 58.652 40.000 0.19 0.00 32.66 1.47
1750 1895 2.873133 ATCAGGTACGTCAGCTAAGC 57.127 50.000 0.00 0.00 32.37 3.09
1924 2069 8.501580 CAATTATCACAAGATTCGCATCATAGT 58.498 33.333 0.00 0.00 35.67 2.12
2020 2165 3.832490 TGACTGGCTAGCTCAGAGTTTTA 59.168 43.478 28.87 9.70 36.22 1.52
2083 2235 8.416329 AGCAACATCAAGAAAAACTACAAGATT 58.584 29.630 0.00 0.00 0.00 2.40
2133 2286 1.220477 GGACAGAGCTGAGGGAAGC 59.780 63.158 4.21 0.00 43.88 3.86
2136 2289 1.194781 GGTTGGACAGAGCTGAGGGA 61.195 60.000 4.21 0.00 0.00 4.20
2156 2309 5.532032 TCAAAATGAATCTCAACAGCTGACA 59.468 36.000 23.35 2.01 0.00 3.58
2208 2361 1.815003 GGAAGCTCCATCACAAGGTTG 59.185 52.381 0.00 0.00 36.28 3.77
2391 2544 6.849305 CACTAGACCGTTGTTGAATGTTTTAC 59.151 38.462 0.00 0.00 0.00 2.01
2440 2593 3.896888 AGGATGCACTGTTCAATTTCCAA 59.103 39.130 0.00 0.00 0.00 3.53
2448 2601 2.221169 GTTGTCAGGATGCACTGTTCA 58.779 47.619 4.42 3.46 39.48 3.18
2465 2618 7.306051 CGCCTAGAATAGTTATTTCGTCTGTTG 60.306 40.741 0.00 0.00 36.82 3.33
2466 2619 6.696148 CGCCTAGAATAGTTATTTCGTCTGTT 59.304 38.462 0.00 0.00 36.82 3.16
2491 2644 0.887387 TGTGCCAAGCCGGTAAAGTC 60.887 55.000 1.90 0.00 36.97 3.01
2493 2646 1.169661 TGTGTGCCAAGCCGGTAAAG 61.170 55.000 1.90 0.00 36.97 1.85
2494 2647 0.538516 ATGTGTGCCAAGCCGGTAAA 60.539 50.000 1.90 0.00 36.97 2.01
2508 2661 7.718272 GCATCAATTATTTGCCATTATGTGT 57.282 32.000 0.00 0.00 32.61 3.72
2569 2722 9.821240 AGGTATTCATGATCTCTACTTGATAGT 57.179 33.333 0.00 0.00 38.44 2.12
2587 2740 5.222079 TCACTACAGTTGCAAGGTATTCA 57.778 39.130 0.00 0.00 0.00 2.57
2588 2741 6.743575 AATCACTACAGTTGCAAGGTATTC 57.256 37.500 0.00 0.00 0.00 1.75
2654 2808 6.522625 TGGTCCATAACATTACCACAAATG 57.477 37.500 0.00 0.00 41.65 2.32
2659 2813 3.886123 AGCTGGTCCATAACATTACCAC 58.114 45.455 0.00 0.00 37.09 4.16
2691 2847 7.717436 GGAAAATTTGGAAACCTTTTATGGTGA 59.283 33.333 0.00 0.00 40.73 4.02
2710 2866 7.059202 AGCTTCATTGTTCTTCTGGAAAATT 57.941 32.000 0.00 0.00 35.51 1.82
2727 2883 6.605194 TCTCTCACACTATTCACTAGCTTCAT 59.395 38.462 0.00 0.00 0.00 2.57
2761 2917 7.716123 AGTTCATCAGAAATTCAATTTTGCCAA 59.284 29.630 0.00 0.00 35.08 4.52
2813 2971 7.907389 TCTTGGTCTCTTGTTTGACTACATAT 58.093 34.615 0.00 0.00 34.01 1.78
2815 2973 6.174720 TCTTGGTCTCTTGTTTGACTACAT 57.825 37.500 0.00 0.00 34.01 2.29
2835 2993 5.123227 TGTGGTTCGTCTTTCTCATTTCTT 58.877 37.500 0.00 0.00 0.00 2.52
2858 3016 7.775093 TGCCACTTAGTTATTAGCATTCATCTT 59.225 33.333 0.00 0.00 0.00 2.40
2889 3047 7.484641 ACACACAAATATACAATGAATTGCGAC 59.515 33.333 2.92 0.00 41.38 5.19
2936 3094 8.836413 CCACAGTCTGTTAAAATCTTAAACTCA 58.164 33.333 1.67 0.00 0.00 3.41
2951 3109 1.418908 CCAGGGACCCACAGTCTGTT 61.419 60.000 14.60 0.00 45.54 3.16
2952 3110 1.843376 CCAGGGACCCACAGTCTGT 60.843 63.158 14.60 0.00 45.54 3.41
3050 3208 1.146041 GCCTGACCACACACACTGA 59.854 57.895 0.00 0.00 0.00 3.41
3071 3231 3.459598 AGCTTCCCATTTCACCAGCTATA 59.540 43.478 0.00 0.00 35.83 1.31
3076 3236 3.012518 CTGTAGCTTCCCATTTCACCAG 58.987 50.000 0.00 0.00 0.00 4.00
3157 3344 4.737279 CAGCAATCTCTGATACACGTACAG 59.263 45.833 0.00 0.00 36.19 2.74
3159 3346 3.487574 GCAGCAATCTCTGATACACGTAC 59.512 47.826 0.00 0.00 36.19 3.67
3161 3348 2.167281 AGCAGCAATCTCTGATACACGT 59.833 45.455 0.00 0.00 36.19 4.49
3162 3349 2.538861 CAGCAGCAATCTCTGATACACG 59.461 50.000 0.00 0.00 36.19 4.49
3169 3356 1.309950 CCATCCAGCAGCAATCTCTG 58.690 55.000 0.00 0.00 37.15 3.35
3170 3357 0.917533 ACCATCCAGCAGCAATCTCT 59.082 50.000 0.00 0.00 0.00 3.10
3213 3400 0.551131 AATGGAGGGTGGAGCTTCCT 60.551 55.000 8.30 0.60 37.46 3.36
3252 3463 5.559148 AACACCCATTTCAGGCATTTTTA 57.441 34.783 0.00 0.00 0.00 1.52
3256 3467 2.491693 CGTAACACCCATTTCAGGCATT 59.508 45.455 0.00 0.00 0.00 3.56
3320 3541 1.206371 CAAGTAATTCCGGACGGAGGT 59.794 52.381 13.64 8.31 46.06 3.85
3328 3549 2.004583 TGAGCGACAAGTAATTCCGG 57.995 50.000 0.00 0.00 0.00 5.14
3330 3551 4.394920 TCCATTTGAGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 39.77 3.01
3331 3552 5.545658 TCCATTTGAGCGACAAGTAATTC 57.454 39.130 0.00 0.00 39.77 2.17
3334 3555 4.323417 ACATCCATTTGAGCGACAAGTAA 58.677 39.130 0.00 0.00 39.77 2.24
3337 3558 4.813161 AGATACATCCATTTGAGCGACAAG 59.187 41.667 0.00 0.00 39.77 3.16
3338 3559 4.769688 AGATACATCCATTTGAGCGACAA 58.230 39.130 0.00 0.00 36.65 3.18
3339 3560 4.406648 AGATACATCCATTTGAGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
3343 3564 8.839310 ATACAACTAGATACATCCATTTGAGC 57.161 34.615 0.00 0.00 0.00 4.26
3350 3571 9.542462 GCACTAAAATACAACTAGATACATCCA 57.458 33.333 0.00 0.00 0.00 3.41
3368 3589 9.571810 CTCAAATGCATGTATTTAGCACTAAAA 57.428 29.630 19.55 0.00 41.60 1.52
3369 3590 8.190122 CCTCAAATGCATGTATTTAGCACTAAA 58.810 33.333 19.55 5.37 41.60 1.85
3371 3592 6.262944 CCCTCAAATGCATGTATTTAGCACTA 59.737 38.462 19.55 3.43 41.60 2.74
3372 3593 5.068198 CCCTCAAATGCATGTATTTAGCACT 59.932 40.000 19.55 0.00 41.60 4.40
3374 3595 5.067674 GTCCCTCAAATGCATGTATTTAGCA 59.932 40.000 19.55 7.71 43.14 3.49
3375 3596 5.067674 TGTCCCTCAAATGCATGTATTTAGC 59.932 40.000 19.55 8.47 0.00 3.09
3379 3633 5.018809 ACTTGTCCCTCAAATGCATGTATT 58.981 37.500 0.00 2.84 35.48 1.89
3386 3640 5.448632 CCGTAATTACTTGTCCCTCAAATGC 60.449 44.000 13.56 0.00 35.48 3.56
3390 3644 4.618927 CGTCCGTAATTACTTGTCCCTCAA 60.619 45.833 13.56 0.00 34.61 3.02
3393 3647 3.091545 TCGTCCGTAATTACTTGTCCCT 58.908 45.455 13.56 0.00 0.00 4.20
3394 3648 3.442100 CTCGTCCGTAATTACTTGTCCC 58.558 50.000 13.56 0.00 0.00 4.46
3396 3650 3.129287 TCCCTCGTCCGTAATTACTTGTC 59.871 47.826 13.56 2.48 0.00 3.18
3397 3651 3.091545 TCCCTCGTCCGTAATTACTTGT 58.908 45.455 13.56 0.00 0.00 3.16
3398 3652 3.703420 CTCCCTCGTCCGTAATTACTTG 58.297 50.000 13.56 5.06 0.00 3.16
3399 3653 2.100418 GCTCCCTCGTCCGTAATTACTT 59.900 50.000 13.56 0.00 0.00 2.24
3400 3654 1.680207 GCTCCCTCGTCCGTAATTACT 59.320 52.381 13.56 0.00 0.00 2.24
3401 3655 1.406539 TGCTCCCTCGTCCGTAATTAC 59.593 52.381 5.47 5.47 0.00 1.89
3403 3657 1.120530 ATGCTCCCTCGTCCGTAATT 58.879 50.000 0.00 0.00 0.00 1.40
3404 3658 1.120530 AATGCTCCCTCGTCCGTAAT 58.879 50.000 0.00 0.00 0.00 1.89
3405 3659 0.899720 AAATGCTCCCTCGTCCGTAA 59.100 50.000 0.00 0.00 0.00 3.18
3406 3660 0.174845 CAAATGCTCCCTCGTCCGTA 59.825 55.000 0.00 0.00 0.00 4.02
3408 3662 1.079127 ACAAATGCTCCCTCGTCCG 60.079 57.895 0.00 0.00 0.00 4.79
3409 3663 0.036388 TGACAAATGCTCCCTCGTCC 60.036 55.000 0.00 0.00 0.00 4.79
3410 3664 1.667724 CATGACAAATGCTCCCTCGTC 59.332 52.381 0.00 0.00 0.00 4.20
3411 3665 1.679944 CCATGACAAATGCTCCCTCGT 60.680 52.381 0.00 0.00 0.00 4.18
3412 3666 1.019673 CCATGACAAATGCTCCCTCG 58.980 55.000 0.00 0.00 0.00 4.63
3415 3692 1.753073 CCTTCCATGACAAATGCTCCC 59.247 52.381 0.00 0.00 0.00 4.30
3420 3697 5.395682 ACATTCACCTTCCATGACAAATG 57.604 39.130 0.00 0.00 0.00 2.32
3480 3758 5.074515 ACAAGAGAATTTGGGAGGAACCTAA 59.925 40.000 0.00 0.00 37.35 2.69
3481 3759 4.601857 ACAAGAGAATTTGGGAGGAACCTA 59.398 41.667 0.00 0.00 38.98 3.08
3482 3760 3.399305 ACAAGAGAATTTGGGAGGAACCT 59.601 43.478 0.00 0.00 38.98 3.50
3523 3801 5.880901 TCTTGAGGGAGAAAGCAACTTTAT 58.119 37.500 0.00 0.00 33.49 1.40
3530 3808 4.473444 ACATTTTCTTGAGGGAGAAAGCA 58.527 39.130 1.03 0.00 44.05 3.91
3572 3878 8.579863 GGATCCATGGTAAGATCTAAAATTTGG 58.420 37.037 12.58 0.00 39.12 3.28
3574 3880 9.887862 ATGGATCCATGGTAAGATCTAAAATTT 57.112 29.630 26.78 0.00 39.12 1.82
3609 3915 6.348540 GGAATGACTGAAAACCTGTATGTGAC 60.349 42.308 0.00 0.00 0.00 3.67
3629 3935 7.636150 AAGTGTTATGATGAAGAAGGGAATG 57.364 36.000 0.00 0.00 0.00 2.67
3686 3992 6.875726 GCATCCAGAGACTGCAAATATATACA 59.124 38.462 0.00 0.00 35.96 2.29
3691 3997 3.117776 TGGCATCCAGAGACTGCAAATAT 60.118 43.478 0.00 0.00 37.64 1.28
3706 4012 1.383456 TTGCATAACCGCTGGCATCC 61.383 55.000 0.00 0.00 35.98 3.51
3709 4015 2.685829 CGTTGCATAACCGCTGGCA 61.686 57.895 0.00 0.00 33.12 4.92
3781 4087 1.004745 ACACACAGGCAGGAATTAGGG 59.995 52.381 0.00 0.00 0.00 3.53
3785 4091 0.773644 AGGACACACAGGCAGGAATT 59.226 50.000 0.00 0.00 0.00 2.17
3799 4105 1.095600 CGTCGAGATTCTGGAGGACA 58.904 55.000 11.57 0.00 0.00 4.02
3820 4126 0.322816 TGGCTTTCTCCACAGGCATC 60.323 55.000 0.00 0.00 40.46 3.91
3822 4128 3.249805 TGGCTTTCTCCACAGGCA 58.750 55.556 0.00 0.00 42.92 4.75
3860 4166 0.322816 AATCCTGTGTGCGCCTCATT 60.323 50.000 4.18 0.00 0.00 2.57
3862 4168 1.073025 AAATCCTGTGTGCGCCTCA 59.927 52.632 4.18 0.67 0.00 3.86
3970 4276 1.002792 CCAATGCATCATGTCTCGCAG 60.003 52.381 0.00 0.00 37.88 5.18
3971 4277 1.018910 CCAATGCATCATGTCTCGCA 58.981 50.000 0.00 0.00 39.01 5.10
3992 4298 7.329717 GTGAGAACGATCTGACTTTTGAAGTAT 59.670 37.037 5.06 0.00 37.75 2.12
4010 4316 0.662619 TGCAAAAGCCTGTGAGAACG 59.337 50.000 0.00 0.00 0.00 3.95
4012 4318 0.662619 CGTGCAAAAGCCTGTGAGAA 59.337 50.000 0.00 0.00 0.00 2.87
4062 4368 1.134367 GCTCTTTTCCCCGTATTTGGC 59.866 52.381 0.00 0.00 0.00 4.52
4067 4373 2.505819 ACTGATGCTCTTTTCCCCGTAT 59.494 45.455 0.00 0.00 0.00 3.06
4139 4445 4.704540 TGGACAAAAAGCATTATCGACCAT 59.295 37.500 0.00 0.00 0.00 3.55
4144 4497 4.155826 TCCTGTGGACAAAAAGCATTATCG 59.844 41.667 0.00 0.00 0.00 2.92
4199 4552 5.032846 TCTATTTCTGAGGGTCCAGTTCAT 58.967 41.667 0.00 0.00 35.71 2.57
4200 4553 4.425772 TCTATTTCTGAGGGTCCAGTTCA 58.574 43.478 0.00 0.00 35.71 3.18
4203 4556 4.689062 TCTTCTATTTCTGAGGGTCCAGT 58.311 43.478 0.00 0.00 35.71 4.00
4221 4574 3.579151 GGTAGTCTCCCCATGGTATCTTC 59.421 52.174 11.73 0.20 0.00 2.87
4265 4618 2.536411 CCATCTCCCAGGCTCATCA 58.464 57.895 0.00 0.00 0.00 3.07
4391 4744 7.982761 TCCAAAATTCCAAATTGAAAGATGG 57.017 32.000 0.00 0.00 0.00 3.51
4402 4755 8.654997 TCCTTGTTGATTATCCAAAATTCCAAA 58.345 29.630 0.00 0.00 0.00 3.28
4403 4756 8.200024 TCCTTGTTGATTATCCAAAATTCCAA 57.800 30.769 0.00 0.00 0.00 3.53
4404 4757 7.579339 GCTCCTTGTTGATTATCCAAAATTCCA 60.579 37.037 0.00 0.00 0.00 3.53
4405 4758 6.758416 GCTCCTTGTTGATTATCCAAAATTCC 59.242 38.462 0.00 0.00 0.00 3.01
4406 4759 6.758416 GGCTCCTTGTTGATTATCCAAAATTC 59.242 38.462 0.00 0.00 0.00 2.17
4407 4760 6.213195 TGGCTCCTTGTTGATTATCCAAAATT 59.787 34.615 0.00 0.00 0.00 1.82
4408 4761 5.721000 TGGCTCCTTGTTGATTATCCAAAAT 59.279 36.000 0.00 0.00 0.00 1.82
4409 4762 5.047377 GTGGCTCCTTGTTGATTATCCAAAA 60.047 40.000 0.00 0.00 0.00 2.44
4418 4771 0.038744 CCCTGTGGCTCCTTGTTGAT 59.961 55.000 0.00 0.00 0.00 2.57
4440 4793 5.304101 TGTTCCTTGTTGCAATAACCTGATT 59.696 36.000 0.59 0.00 0.00 2.57
4471 4843 8.188501 TGATATTAGGGACTATGGAGAGGTAT 57.811 38.462 0.00 0.00 42.38 2.73
4473 4845 6.485388 TGATATTAGGGACTATGGAGAGGT 57.515 41.667 0.00 0.00 42.38 3.85
4474 4846 7.069331 GTGATGATATTAGGGACTATGGAGAGG 59.931 44.444 0.00 0.00 42.38 3.69
4475 4847 7.838696 AGTGATGATATTAGGGACTATGGAGAG 59.161 40.741 0.00 0.00 42.38 3.20
4476 4848 7.617329 CAGTGATGATATTAGGGACTATGGAGA 59.383 40.741 0.00 0.00 42.38 3.71
4478 4850 6.155221 GCAGTGATGATATTAGGGACTATGGA 59.845 42.308 0.00 0.00 42.38 3.41
4480 4852 7.040494 CAGCAGTGATGATATTAGGGACTATG 58.960 42.308 0.98 0.00 42.38 2.23
4481 4853 6.956435 TCAGCAGTGATGATATTAGGGACTAT 59.044 38.462 7.06 0.00 42.38 2.12
4482 4854 6.314917 TCAGCAGTGATGATATTAGGGACTA 58.685 40.000 7.06 0.00 41.75 2.59
4483 4855 5.150715 TCAGCAGTGATGATATTAGGGACT 58.849 41.667 7.06 0.00 46.37 3.85
4484 4856 5.474578 TCAGCAGTGATGATATTAGGGAC 57.525 43.478 7.06 0.00 0.00 4.46
4495 4867 1.130749 GCAAGAGCTTCAGCAGTGATG 59.869 52.381 0.78 0.78 45.16 3.07
4544 4916 3.239861 CCTTCAGCAGGTTCAGGTC 57.760 57.895 0.00 0.00 37.99 3.85
4575 4947 7.246311 CACAAACTAATCAACATAGGCAAGAG 58.754 38.462 0.00 0.00 0.00 2.85
4577 4949 6.150976 TCCACAAACTAATCAACATAGGCAAG 59.849 38.462 0.00 0.00 0.00 4.01
4578 4950 6.007076 TCCACAAACTAATCAACATAGGCAA 58.993 36.000 0.00 0.00 0.00 4.52
4580 4952 5.648092 ACTCCACAAACTAATCAACATAGGC 59.352 40.000 0.00 0.00 0.00 3.93
4581 4953 7.011482 GCTACTCCACAAACTAATCAACATAGG 59.989 40.741 0.00 0.00 0.00 2.57
4583 4955 7.390823 TGCTACTCCACAAACTAATCAACATA 58.609 34.615 0.00 0.00 0.00 2.29
4584 4956 6.237901 TGCTACTCCACAAACTAATCAACAT 58.762 36.000 0.00 0.00 0.00 2.71
4594 4968 1.798813 CGTTCCTGCTACTCCACAAAC 59.201 52.381 0.00 0.00 0.00 2.93
4602 4976 5.298777 ACGATCTATTAACGTTCCTGCTACT 59.701 40.000 2.82 0.00 36.91 2.57
4607 4981 6.129168 GCATACACGATCTATTAACGTTCCTG 60.129 42.308 2.82 0.00 38.18 3.86
4622 4996 3.388024 ACAACATAGGGAGCATACACGAT 59.612 43.478 0.00 0.00 0.00 3.73
4631 5005 5.376625 TGGATTTGATACAACATAGGGAGC 58.623 41.667 0.00 0.00 0.00 4.70
4666 5040 8.079211 AGTAAGCTCAAAAGATATACACTCCA 57.921 34.615 0.00 0.00 0.00 3.86
4690 5064 2.690497 TCGGCCTCTCTTCTAACATGAG 59.310 50.000 0.00 0.00 0.00 2.90
4710 5270 2.417933 CTGTGTAGTGAGCAGCCATTTC 59.582 50.000 0.00 0.00 0.00 2.17
4738 5298 2.489329 ACAACATTCGATTTGGAGGCAG 59.511 45.455 6.82 0.00 0.00 4.85
4739 5299 2.228582 CACAACATTCGATTTGGAGGCA 59.771 45.455 6.82 0.00 0.00 4.75
4741 5301 2.164219 CCCACAACATTCGATTTGGAGG 59.836 50.000 6.82 7.41 0.00 4.30
4761 5321 4.409247 AGGAACCTGATACATCCAAGTACC 59.591 45.833 0.00 0.00 34.30 3.34
4836 5403 3.581755 GAGACAAACAGCCATGTACGTA 58.418 45.455 0.00 0.00 39.29 3.57
4837 5404 2.413837 GAGACAAACAGCCATGTACGT 58.586 47.619 0.00 0.00 39.29 3.57
4838 5405 1.390123 CGAGACAAACAGCCATGTACG 59.610 52.381 0.00 0.00 39.29 3.67
4839 5406 2.683968 TCGAGACAAACAGCCATGTAC 58.316 47.619 0.00 0.00 39.29 2.90
4866 5433 0.956633 CACACCAAGCATGCAACTCT 59.043 50.000 21.98 0.00 0.00 3.24
4900 5467 2.544480 CATGTCAGTGAAGCATGCAG 57.456 50.000 21.98 2.25 34.47 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.