Multiple sequence alignment - TraesCS1B01G322000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G322000 chr1B 100.000 7172 0 0 1 7172 546527780 546534951 0.000000e+00 13245
1 TraesCS1B01G322000 chr1D 94.121 3521 141 33 290 3783 406545256 406548737 0.000000e+00 5295
2 TraesCS1B01G322000 chr1D 93.882 2321 69 22 4426 6692 406549706 406552007 0.000000e+00 3432
3 TraesCS1B01G322000 chr1D 96.828 536 15 2 3898 4432 406549135 406549669 0.000000e+00 894
4 TraesCS1B01G322000 chr1D 88.671 662 35 12 6469 7100 406551830 406552481 0.000000e+00 771
5 TraesCS1B01G322000 chr1D 92.143 140 7 3 6555 6692 406551806 406551943 2.040000e-45 195
6 TraesCS1B01G322000 chr1D 86.667 120 16 0 177 296 462750926 462751045 4.510000e-27 134
7 TraesCS1B01G322000 chr1D 80.319 188 19 2 6469 6638 406551896 406552083 7.550000e-25 126
8 TraesCS1B01G322000 chr1D 90.909 77 5 1 7098 7172 406552561 406552637 1.270000e-17 102
9 TraesCS1B01G322000 chr1A 93.142 2785 110 35 4426 7172 501705844 501708585 0.000000e+00 4010
10 TraesCS1B01G322000 chr1A 93.297 2536 127 19 345 2851 501701443 501703964 0.000000e+00 3701
11 TraesCS1B01G322000 chr1A 95.923 932 24 5 2913 3836 501703963 501704888 0.000000e+00 1498
12 TraesCS1B01G322000 chr1A 95.304 575 26 1 3859 4432 501705233 501705807 0.000000e+00 911
13 TraesCS1B01G322000 chr7D 87.705 122 15 0 177 298 511156688 511156809 7.500000e-30 143
14 TraesCS1B01G322000 chr7D 87.705 122 15 0 177 298 511159105 511159226 7.500000e-30 143
15 TraesCS1B01G322000 chr7D 87.705 122 15 0 177 298 511161531 511161652 7.500000e-30 143
16 TraesCS1B01G322000 chr7D 87.705 122 14 1 177 298 511154273 511154393 2.700000e-29 141
17 TraesCS1B01G322000 chr3D 88.333 120 13 1 177 296 156197698 156197580 7.500000e-30 143
18 TraesCS1B01G322000 chr2D 87.500 120 15 0 177 296 589703006 589702887 9.700000e-29 139
19 TraesCS1B01G322000 chr4D 86.290 124 17 0 177 300 31054419 31054542 1.250000e-27 135
20 TraesCS1B01G322000 chr6D 86.667 120 16 0 177 296 426991479 426991360 4.510000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G322000 chr1B 546527780 546534951 7171 False 13245 13245 100.000000 1 7172 1 chr1B.!!$F1 7171
1 TraesCS1B01G322000 chr1D 406545256 406552637 7381 False 1545 5295 90.981857 290 7172 7 chr1D.!!$F2 6882
2 TraesCS1B01G322000 chr1A 501701443 501708585 7142 False 2530 4010 94.416500 345 7172 4 chr1A.!!$F1 6827

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
273 274 0.111089 GCGTGTATATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01 F
274 275 0.159554 CGTGTATATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85 F
279 280 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41 F
280 281 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74 F
622 628 0.457166 CACCGCGAAACGTCTCCATA 60.457 55.000 8.23 0.00 41.42 2.74 F
1384 1413 1.005097 TCCTGATGGCAATGAAGCTGT 59.995 47.619 0.00 0.00 34.17 4.40 F
2053 2089 1.214589 CCCGACGAGTTGGTACTGG 59.785 63.158 8.57 0.00 33.84 4.00 F
3836 3880 0.039074 CTCGATGACTATGGCGGGAC 60.039 60.000 0.00 0.00 0.00 4.46 F
4017 4383 0.039978 TGTACAAAAATGCCGGTGCG 60.040 50.000 1.90 0.00 41.78 5.34 F
4663 5081 3.507786 TCGTTTCACTGATGACATACCG 58.492 45.455 0.00 0.00 33.38 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1409 1438 0.101219 GATTTTCCACGCATCCTGCC 59.899 55.000 0.00 0.0 41.12 4.85 R
1410 1439 0.101219 GGATTTTCCACGCATCCTGC 59.899 55.000 0.00 0.0 36.87 4.85 R
1725 1760 0.392193 AGCCATCTCCGCTGAAGTTG 60.392 55.000 0.00 0.0 34.56 3.16 R
2028 2064 0.460311 CCAACTCGTCGGGCTAAGAT 59.540 55.000 0.00 0.0 0.00 2.40 R
2371 2407 1.007721 ACAGGTCCTAGCAGATGAGGT 59.992 52.381 0.00 0.0 34.20 3.85 R
2373 2409 1.202510 GCACAGGTCCTAGCAGATGAG 60.203 57.143 9.94 0.0 0.00 2.90 R
3857 3901 0.171903 TCAACTCTTACCGCGGCTAC 59.828 55.000 28.58 0.0 0.00 3.58 R
5272 5706 4.079253 GACCCAAATCTGGAACTTTGCTA 58.921 43.478 0.00 0.0 46.92 3.49 R
5294 5728 5.089970 TCATCAACACTAGAATCAGGTGG 57.910 43.478 0.00 0.0 35.53 4.61 R
6458 6928 0.247736 CCTGGAAGAGTGGAACCTCG 59.752 60.000 0.00 0.0 37.80 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.893305 AAAATCAAACTTTTAAGACGTGATAGG 57.107 29.630 0.00 0.00 0.00 2.57
36 37 8.617290 AATCAAACTTTTAAGACGTGATAGGT 57.383 30.769 0.00 0.00 0.00 3.08
37 38 7.647907 TCAAACTTTTAAGACGTGATAGGTC 57.352 36.000 0.00 0.00 33.51 3.85
38 39 7.211573 TCAAACTTTTAAGACGTGATAGGTCA 58.788 34.615 0.00 0.00 35.60 4.02
39 40 7.876068 TCAAACTTTTAAGACGTGATAGGTCAT 59.124 33.333 0.00 0.00 35.60 3.06
40 41 8.504005 CAAACTTTTAAGACGTGATAGGTCATT 58.496 33.333 0.00 0.22 35.60 2.57
41 42 7.596749 ACTTTTAAGACGTGATAGGTCATTG 57.403 36.000 0.00 0.00 35.60 2.82
42 43 7.159372 ACTTTTAAGACGTGATAGGTCATTGT 58.841 34.615 0.00 0.00 35.60 2.71
43 44 7.331193 ACTTTTAAGACGTGATAGGTCATTGTC 59.669 37.037 0.00 5.95 40.25 3.18
44 45 6.525578 TTAAGACGTGATAGGTCATTGTCT 57.474 37.500 0.00 9.20 46.23 3.41
45 46 4.377839 AGACGTGATAGGTCATTGTCTG 57.622 45.455 0.00 0.00 44.40 3.51
46 47 2.860735 GACGTGATAGGTCATTGTCTGC 59.139 50.000 0.00 0.00 38.51 4.26
47 48 1.854743 CGTGATAGGTCATTGTCTGCG 59.145 52.381 0.00 0.00 36.60 5.18
48 49 2.205074 GTGATAGGTCATTGTCTGCGG 58.795 52.381 0.00 0.00 36.60 5.69
49 50 2.107366 TGATAGGTCATTGTCTGCGGA 58.893 47.619 0.00 0.00 0.00 5.54
50 51 2.159099 TGATAGGTCATTGTCTGCGGAC 60.159 50.000 19.20 19.20 42.42 4.79
63 64 2.738521 CGGACACGCCCAGACTTG 60.739 66.667 0.00 0.00 0.00 3.16
64 65 2.426023 GGACACGCCCAGACTTGT 59.574 61.111 0.00 0.00 0.00 3.16
65 66 1.668151 GGACACGCCCAGACTTGTC 60.668 63.158 0.00 0.00 37.92 3.18
66 67 1.367840 GACACGCCCAGACTTGTCT 59.632 57.895 0.00 0.00 36.27 3.41
67 68 0.946221 GACACGCCCAGACTTGTCTG 60.946 60.000 20.36 20.36 36.27 3.51
68 69 2.031163 ACGCCCAGACTTGTCTGC 59.969 61.111 21.51 12.55 36.46 4.26
69 70 3.114616 CGCCCAGACTTGTCTGCG 61.115 66.667 21.51 19.01 36.46 5.18
70 71 2.743928 GCCCAGACTTGTCTGCGG 60.744 66.667 21.51 22.08 36.46 5.69
71 72 3.059982 CCCAGACTTGTCTGCGGA 58.940 61.111 21.51 0.00 36.46 5.54
72 73 1.374758 CCCAGACTTGTCTGCGGAC 60.375 63.158 19.20 19.20 42.42 4.79
80 81 3.231734 TGTCTGCGGACATTTGAGG 57.768 52.632 24.54 0.00 46.19 3.86
81 82 0.321564 TGTCTGCGGACATTTGAGGG 60.322 55.000 24.54 0.00 46.19 4.30
82 83 1.026718 GTCTGCGGACATTTGAGGGG 61.027 60.000 21.02 0.00 41.75 4.79
83 84 1.750399 CTGCGGACATTTGAGGGGG 60.750 63.158 0.00 0.00 0.00 5.40
84 85 3.140814 GCGGACATTTGAGGGGGC 61.141 66.667 0.00 0.00 0.00 5.80
85 86 2.824041 CGGACATTTGAGGGGGCG 60.824 66.667 0.00 0.00 0.00 6.13
86 87 2.440247 GGACATTTGAGGGGGCGG 60.440 66.667 0.00 0.00 0.00 6.13
87 88 2.440247 GACATTTGAGGGGGCGGG 60.440 66.667 0.00 0.00 0.00 6.13
88 89 3.264845 ACATTTGAGGGGGCGGGT 61.265 61.111 0.00 0.00 0.00 5.28
89 90 2.037208 CATTTGAGGGGGCGGGTT 59.963 61.111 0.00 0.00 0.00 4.11
90 91 1.609210 CATTTGAGGGGGCGGGTTT 60.609 57.895 0.00 0.00 0.00 3.27
91 92 1.609210 ATTTGAGGGGGCGGGTTTG 60.609 57.895 0.00 0.00 0.00 2.93
92 93 4.986708 TTGAGGGGGCGGGTTTGC 62.987 66.667 0.00 0.00 0.00 3.68
98 99 2.358984 GGGCGGGTTTGCGAAGTA 60.359 61.111 0.00 0.00 35.06 2.24
99 100 2.683859 GGGCGGGTTTGCGAAGTAC 61.684 63.158 0.00 0.00 35.06 2.73
100 101 2.472934 GCGGGTTTGCGAAGTACG 59.527 61.111 0.00 0.00 45.66 3.67
101 102 2.023223 GCGGGTTTGCGAAGTACGA 61.023 57.895 8.34 0.00 45.77 3.43
102 103 1.777199 CGGGTTTGCGAAGTACGAC 59.223 57.895 0.00 0.00 45.77 4.34
103 104 0.665369 CGGGTTTGCGAAGTACGACT 60.665 55.000 0.00 0.00 45.77 4.18
104 105 0.788391 GGGTTTGCGAAGTACGACTG 59.212 55.000 0.00 0.00 45.77 3.51
105 106 1.494824 GGTTTGCGAAGTACGACTGT 58.505 50.000 0.00 0.00 45.77 3.55
106 107 2.607771 GGGTTTGCGAAGTACGACTGTA 60.608 50.000 0.00 0.00 45.77 2.74
107 108 3.248266 GGTTTGCGAAGTACGACTGTAT 58.752 45.455 0.00 0.00 45.77 2.29
108 109 4.414852 GGTTTGCGAAGTACGACTGTATA 58.585 43.478 0.00 0.00 45.77 1.47
109 110 5.039333 GGTTTGCGAAGTACGACTGTATAT 58.961 41.667 0.00 0.00 45.77 0.86
110 111 5.172771 GGTTTGCGAAGTACGACTGTATATC 59.827 44.000 0.00 0.00 45.77 1.63
111 112 4.478843 TGCGAAGTACGACTGTATATCC 57.521 45.455 0.00 0.00 45.77 2.59
112 113 4.132336 TGCGAAGTACGACTGTATATCCT 58.868 43.478 0.00 0.00 45.77 3.24
113 114 4.212847 TGCGAAGTACGACTGTATATCCTC 59.787 45.833 0.00 0.00 45.77 3.71
114 115 4.451774 GCGAAGTACGACTGTATATCCTCT 59.548 45.833 0.00 0.00 45.77 3.69
115 116 5.049543 GCGAAGTACGACTGTATATCCTCTT 60.050 44.000 0.00 0.00 45.77 2.85
116 117 6.146837 GCGAAGTACGACTGTATATCCTCTTA 59.853 42.308 0.00 0.00 45.77 2.10
117 118 7.508965 CGAAGTACGACTGTATATCCTCTTAC 58.491 42.308 0.00 0.00 45.77 2.34
118 119 7.170489 CGAAGTACGACTGTATATCCTCTTACA 59.830 40.741 0.00 0.00 45.77 2.41
119 120 7.727331 AGTACGACTGTATATCCTCTTACAC 57.273 40.000 0.00 0.00 32.11 2.90
120 121 6.709846 AGTACGACTGTATATCCTCTTACACC 59.290 42.308 0.00 0.00 32.11 4.16
121 122 4.826183 ACGACTGTATATCCTCTTACACCC 59.174 45.833 0.00 0.00 0.00 4.61
122 123 5.071370 CGACTGTATATCCTCTTACACCCT 58.929 45.833 0.00 0.00 0.00 4.34
123 124 5.048643 CGACTGTATATCCTCTTACACCCTG 60.049 48.000 0.00 0.00 0.00 4.45
124 125 6.027025 ACTGTATATCCTCTTACACCCTGA 57.973 41.667 0.00 0.00 0.00 3.86
125 126 6.441222 ACTGTATATCCTCTTACACCCTGAA 58.559 40.000 0.00 0.00 0.00 3.02
126 127 6.901300 ACTGTATATCCTCTTACACCCTGAAA 59.099 38.462 0.00 0.00 0.00 2.69
127 128 7.120923 TGTATATCCTCTTACACCCTGAAAC 57.879 40.000 0.00 0.00 0.00 2.78
128 129 6.670464 TGTATATCCTCTTACACCCTGAAACA 59.330 38.462 0.00 0.00 0.00 2.83
129 130 6.831664 ATATCCTCTTACACCCTGAAACAT 57.168 37.500 0.00 0.00 0.00 2.71
130 131 4.286297 TCCTCTTACACCCTGAAACATG 57.714 45.455 0.00 0.00 0.00 3.21
131 132 3.907474 TCCTCTTACACCCTGAAACATGA 59.093 43.478 0.00 0.00 0.00 3.07
132 133 4.536090 TCCTCTTACACCCTGAAACATGAT 59.464 41.667 0.00 0.00 0.00 2.45
133 134 4.878397 CCTCTTACACCCTGAAACATGATC 59.122 45.833 0.00 0.00 0.00 2.92
134 135 4.843728 TCTTACACCCTGAAACATGATCC 58.156 43.478 0.00 0.00 0.00 3.36
135 136 2.514458 ACACCCTGAAACATGATCCC 57.486 50.000 0.00 0.00 0.00 3.85
136 137 1.995542 ACACCCTGAAACATGATCCCT 59.004 47.619 0.00 0.00 0.00 4.20
137 138 2.379907 ACACCCTGAAACATGATCCCTT 59.620 45.455 0.00 0.00 0.00 3.95
138 139 3.181418 ACACCCTGAAACATGATCCCTTT 60.181 43.478 0.00 0.00 0.00 3.11
139 140 4.044065 ACACCCTGAAACATGATCCCTTTA 59.956 41.667 0.00 0.00 0.00 1.85
140 141 4.399303 CACCCTGAAACATGATCCCTTTAC 59.601 45.833 0.00 0.00 0.00 2.01
141 142 3.627577 CCCTGAAACATGATCCCTTTACG 59.372 47.826 0.00 0.00 0.00 3.18
142 143 4.261801 CCTGAAACATGATCCCTTTACGT 58.738 43.478 0.00 0.00 0.00 3.57
143 144 4.700213 CCTGAAACATGATCCCTTTACGTT 59.300 41.667 0.00 0.00 0.00 3.99
144 145 5.183140 CCTGAAACATGATCCCTTTACGTTT 59.817 40.000 0.00 0.00 0.00 3.60
145 146 6.373216 CCTGAAACATGATCCCTTTACGTTTA 59.627 38.462 0.00 0.00 0.00 2.01
146 147 7.372451 TGAAACATGATCCCTTTACGTTTAG 57.628 36.000 0.00 0.00 0.00 1.85
147 148 6.938030 TGAAACATGATCCCTTTACGTTTAGT 59.062 34.615 0.00 0.00 0.00 2.24
148 149 7.446013 TGAAACATGATCCCTTTACGTTTAGTT 59.554 33.333 0.00 0.00 0.00 2.24
149 150 8.851541 AAACATGATCCCTTTACGTTTAGTTA 57.148 30.769 0.00 0.00 0.00 2.24
150 151 8.851541 AACATGATCCCTTTACGTTTAGTTAA 57.148 30.769 0.00 0.00 0.00 2.01
151 152 8.260270 ACATGATCCCTTTACGTTTAGTTAAC 57.740 34.615 0.00 0.00 0.00 2.01
152 153 7.879160 ACATGATCCCTTTACGTTTAGTTAACA 59.121 33.333 8.61 0.00 36.50 2.41
153 154 7.656707 TGATCCCTTTACGTTTAGTTAACAC 57.343 36.000 8.61 0.00 36.50 3.32
154 155 7.444299 TGATCCCTTTACGTTTAGTTAACACT 58.556 34.615 8.61 0.00 36.50 3.55
155 156 7.599998 TGATCCCTTTACGTTTAGTTAACACTC 59.400 37.037 8.61 0.00 36.50 3.51
156 157 6.223120 TCCCTTTACGTTTAGTTAACACTCC 58.777 40.000 8.61 0.00 36.50 3.85
157 158 6.041979 TCCCTTTACGTTTAGTTAACACTCCT 59.958 38.462 8.61 0.00 36.50 3.69
158 159 6.367149 CCCTTTACGTTTAGTTAACACTCCTC 59.633 42.308 8.61 0.00 36.50 3.71
159 160 6.925165 CCTTTACGTTTAGTTAACACTCCTCA 59.075 38.462 8.61 0.00 36.50 3.86
160 161 7.439056 CCTTTACGTTTAGTTAACACTCCTCAA 59.561 37.037 8.61 0.00 36.50 3.02
161 162 8.715191 TTTACGTTTAGTTAACACTCCTCAAA 57.285 30.769 8.61 0.00 36.50 2.69
162 163 8.715191 TTACGTTTAGTTAACACTCCTCAAAA 57.285 30.769 8.61 0.00 36.50 2.44
163 164 7.008440 ACGTTTAGTTAACACTCCTCAAAAC 57.992 36.000 8.61 4.63 36.50 2.43
164 165 6.594937 ACGTTTAGTTAACACTCCTCAAAACA 59.405 34.615 8.61 0.00 36.50 2.83
165 166 7.119553 ACGTTTAGTTAACACTCCTCAAAACAA 59.880 33.333 8.61 0.00 36.50 2.83
166 167 7.964011 CGTTTAGTTAACACTCCTCAAAACAAA 59.036 33.333 8.61 0.00 36.50 2.83
167 168 9.628746 GTTTAGTTAACACTCCTCAAAACAAAA 57.371 29.630 8.61 0.00 36.71 2.44
168 169 9.628746 TTTAGTTAACACTCCTCAAAACAAAAC 57.371 29.630 8.61 0.00 34.06 2.43
169 170 7.222000 AGTTAACACTCCTCAAAACAAAACA 57.778 32.000 8.61 0.00 0.00 2.83
170 171 7.088272 AGTTAACACTCCTCAAAACAAAACAC 58.912 34.615 8.61 0.00 0.00 3.32
171 172 4.091453 ACACTCCTCAAAACAAAACACG 57.909 40.909 0.00 0.00 0.00 4.49
172 173 3.754323 ACACTCCTCAAAACAAAACACGA 59.246 39.130 0.00 0.00 0.00 4.35
173 174 4.095610 CACTCCTCAAAACAAAACACGAC 58.904 43.478 0.00 0.00 0.00 4.34
174 175 3.754323 ACTCCTCAAAACAAAACACGACA 59.246 39.130 0.00 0.00 0.00 4.35
175 176 4.216687 ACTCCTCAAAACAAAACACGACAA 59.783 37.500 0.00 0.00 0.00 3.18
176 177 4.728534 TCCTCAAAACAAAACACGACAAG 58.271 39.130 0.00 0.00 0.00 3.16
177 178 4.456222 TCCTCAAAACAAAACACGACAAGA 59.544 37.500 0.00 0.00 0.00 3.02
178 179 5.124776 TCCTCAAAACAAAACACGACAAGAT 59.875 36.000 0.00 0.00 0.00 2.40
179 180 6.316640 TCCTCAAAACAAAACACGACAAGATA 59.683 34.615 0.00 0.00 0.00 1.98
180 181 7.012894 TCCTCAAAACAAAACACGACAAGATAT 59.987 33.333 0.00 0.00 0.00 1.63
181 182 7.113404 CCTCAAAACAAAACACGACAAGATATG 59.887 37.037 0.00 0.00 0.00 1.78
182 183 6.416455 TCAAAACAAAACACGACAAGATATGC 59.584 34.615 0.00 0.00 0.00 3.14
183 184 4.419522 ACAAAACACGACAAGATATGCC 57.580 40.909 0.00 0.00 0.00 4.40
184 185 3.120338 ACAAAACACGACAAGATATGCCG 60.120 43.478 0.00 0.00 41.10 5.69
185 186 2.665649 AACACGACAAGATATGCCGA 57.334 45.000 0.00 0.00 37.02 5.54
186 187 1.922570 ACACGACAAGATATGCCGAC 58.077 50.000 0.00 0.00 37.02 4.79
187 188 1.476891 ACACGACAAGATATGCCGACT 59.523 47.619 0.00 0.00 37.02 4.18
188 189 2.120232 CACGACAAGATATGCCGACTC 58.880 52.381 0.00 0.00 37.02 3.36
189 190 1.749063 ACGACAAGATATGCCGACTCA 59.251 47.619 0.00 0.00 37.02 3.41
190 191 2.223595 ACGACAAGATATGCCGACTCAG 60.224 50.000 0.00 0.00 37.02 3.35
191 192 2.223595 CGACAAGATATGCCGACTCAGT 60.224 50.000 0.00 0.00 37.02 3.41
192 193 3.376540 GACAAGATATGCCGACTCAGTC 58.623 50.000 0.00 0.00 0.00 3.51
193 194 3.027412 ACAAGATATGCCGACTCAGTCT 58.973 45.455 2.61 0.00 0.00 3.24
194 195 3.449018 ACAAGATATGCCGACTCAGTCTT 59.551 43.478 2.61 0.00 0.00 3.01
195 196 4.081420 ACAAGATATGCCGACTCAGTCTTT 60.081 41.667 2.61 0.00 0.00 2.52
196 197 4.314740 AGATATGCCGACTCAGTCTTTC 57.685 45.455 2.61 0.00 0.00 2.62
197 198 3.701542 AGATATGCCGACTCAGTCTTTCA 59.298 43.478 2.61 0.00 0.00 2.69
198 199 2.376808 ATGCCGACTCAGTCTTTCAG 57.623 50.000 2.61 0.00 0.00 3.02
199 200 1.328279 TGCCGACTCAGTCTTTCAGA 58.672 50.000 2.61 0.00 0.00 3.27
200 201 1.895798 TGCCGACTCAGTCTTTCAGAT 59.104 47.619 2.61 0.00 0.00 2.90
201 202 2.266554 GCCGACTCAGTCTTTCAGATG 58.733 52.381 2.61 0.00 0.00 2.90
202 203 2.266554 CCGACTCAGTCTTTCAGATGC 58.733 52.381 2.61 0.00 0.00 3.91
203 204 1.916651 CGACTCAGTCTTTCAGATGCG 59.083 52.381 2.61 0.00 0.00 4.73
204 205 1.658095 GACTCAGTCTTTCAGATGCGC 59.342 52.381 0.00 0.00 0.00 6.09
205 206 1.274728 ACTCAGTCTTTCAGATGCGCT 59.725 47.619 9.73 0.00 0.00 5.92
206 207 2.289320 ACTCAGTCTTTCAGATGCGCTT 60.289 45.455 9.73 0.55 0.00 4.68
207 208 3.056536 ACTCAGTCTTTCAGATGCGCTTA 60.057 43.478 9.73 0.00 0.00 3.09
208 209 4.118410 CTCAGTCTTTCAGATGCGCTTAT 58.882 43.478 9.73 0.00 0.00 1.73
209 210 5.163509 ACTCAGTCTTTCAGATGCGCTTATA 60.164 40.000 9.73 0.00 0.00 0.98
210 211 5.284864 TCAGTCTTTCAGATGCGCTTATAG 58.715 41.667 9.73 0.00 0.00 1.31
211 212 4.447054 CAGTCTTTCAGATGCGCTTATAGG 59.553 45.833 9.73 0.00 0.00 2.57
212 213 4.342378 AGTCTTTCAGATGCGCTTATAGGA 59.658 41.667 9.73 0.00 0.00 2.94
213 214 5.050490 GTCTTTCAGATGCGCTTATAGGAA 58.950 41.667 9.73 2.26 0.00 3.36
214 215 5.698545 GTCTTTCAGATGCGCTTATAGGAAT 59.301 40.000 9.73 0.00 0.00 3.01
215 216 6.868864 GTCTTTCAGATGCGCTTATAGGAATA 59.131 38.462 9.73 0.00 0.00 1.75
216 217 7.062839 GTCTTTCAGATGCGCTTATAGGAATAG 59.937 40.741 9.73 6.11 0.00 1.73
217 218 6.590234 TTCAGATGCGCTTATAGGAATAGA 57.410 37.500 9.73 0.00 0.00 1.98
218 219 6.590234 TCAGATGCGCTTATAGGAATAGAA 57.410 37.500 9.73 0.00 0.00 2.10
219 220 6.993079 TCAGATGCGCTTATAGGAATAGAAA 58.007 36.000 9.73 0.00 0.00 2.52
220 221 7.441836 TCAGATGCGCTTATAGGAATAGAAAA 58.558 34.615 9.73 0.00 0.00 2.29
221 222 8.097038 TCAGATGCGCTTATAGGAATAGAAAAT 58.903 33.333 9.73 0.00 0.00 1.82
222 223 8.173775 CAGATGCGCTTATAGGAATAGAAAATG 58.826 37.037 9.73 0.00 0.00 2.32
223 224 6.241207 TGCGCTTATAGGAATAGAAAATGC 57.759 37.500 9.73 0.00 0.00 3.56
224 225 5.107104 TGCGCTTATAGGAATAGAAAATGCG 60.107 40.000 9.73 0.00 41.14 4.73
225 226 5.107065 GCGCTTATAGGAATAGAAAATGCGT 60.107 40.000 0.00 0.00 40.47 5.24
226 227 6.299604 CGCTTATAGGAATAGAAAATGCGTG 58.700 40.000 0.00 0.00 34.89 5.34
227 228 6.073765 CGCTTATAGGAATAGAAAATGCGTGT 60.074 38.462 0.00 0.00 34.89 4.49
228 229 7.072030 GCTTATAGGAATAGAAAATGCGTGTG 58.928 38.462 0.00 0.00 0.00 3.82
229 230 7.254795 GCTTATAGGAATAGAAAATGCGTGTGT 60.255 37.037 0.00 0.00 0.00 3.72
230 231 4.685169 AGGAATAGAAAATGCGTGTGTG 57.315 40.909 0.00 0.00 0.00 3.82
231 232 3.119849 AGGAATAGAAAATGCGTGTGTGC 60.120 43.478 0.00 0.00 0.00 4.57
232 233 2.525750 ATAGAAAATGCGTGTGTGCG 57.474 45.000 0.00 0.00 37.81 5.34
233 234 1.222300 TAGAAAATGCGTGTGTGCGT 58.778 45.000 0.00 0.00 37.81 5.24
234 235 0.380378 AGAAAATGCGTGTGTGCGTT 59.620 45.000 0.00 0.00 45.62 4.84
239 240 3.383546 AATGCGTGTGTGCGTTTATAG 57.616 42.857 0.00 0.00 41.11 1.31
240 241 1.072391 TGCGTGTGTGCGTTTATAGG 58.928 50.000 0.00 0.00 37.81 2.57
241 242 0.372334 GCGTGTGTGCGTTTATAGGG 59.628 55.000 0.00 0.00 0.00 3.53
242 243 1.999048 CGTGTGTGCGTTTATAGGGA 58.001 50.000 0.00 0.00 0.00 4.20
243 244 2.546778 CGTGTGTGCGTTTATAGGGAT 58.453 47.619 0.00 0.00 0.00 3.85
244 245 3.708890 CGTGTGTGCGTTTATAGGGATA 58.291 45.455 0.00 0.00 0.00 2.59
245 246 4.114073 CGTGTGTGCGTTTATAGGGATAA 58.886 43.478 0.00 0.00 0.00 1.75
246 247 4.208460 CGTGTGTGCGTTTATAGGGATAAG 59.792 45.833 0.00 0.00 0.00 1.73
247 248 4.025145 GTGTGTGCGTTTATAGGGATAAGC 60.025 45.833 0.00 0.00 0.00 3.09
253 254 5.697848 CGTTTATAGGGATAAGCGTATGC 57.302 43.478 0.00 0.00 43.36 3.14
267 268 1.317611 CGTATGCGCGTGTATATGAGC 59.682 52.381 18.12 0.41 38.85 4.26
270 271 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
271 272 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
272 273 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
273 274 0.111089 GCGTGTATATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01
274 275 0.159554 CGTGTATATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85
275 276 1.209128 GTGTATATGAGCGCTTGCGT 58.791 50.000 13.26 3.24 45.69 5.24
276 277 1.190323 GTGTATATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
277 278 1.067060 TGTATATGAGCGCTTGCGTCT 59.933 47.619 13.26 13.17 45.69 4.18
278 279 1.453524 GTATATGAGCGCTTGCGTCTG 59.546 52.381 13.26 0.00 45.69 3.51
279 280 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41
280 281 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
281 282 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
282 283 2.432628 AGCGCTTGCGTCTGTACC 60.433 61.111 16.38 0.00 45.69 3.34
283 284 3.838795 GCGCTTGCGTCTGTACCG 61.839 66.667 16.38 0.00 0.00 4.02
284 285 2.430244 CGCTTGCGTCTGTACCGT 60.430 61.111 6.86 0.00 0.00 4.83
285 286 2.716828 CGCTTGCGTCTGTACCGTG 61.717 63.158 6.86 0.00 0.00 4.94
286 287 1.663702 GCTTGCGTCTGTACCGTGT 60.664 57.895 0.00 0.00 0.00 4.49
287 288 1.219522 GCTTGCGTCTGTACCGTGTT 61.220 55.000 0.00 0.00 0.00 3.32
288 289 1.214367 CTTGCGTCTGTACCGTGTTT 58.786 50.000 0.00 0.00 0.00 2.83
289 290 2.396601 CTTGCGTCTGTACCGTGTTTA 58.603 47.619 0.00 0.00 0.00 2.01
290 291 2.505628 TGCGTCTGTACCGTGTTTAA 57.494 45.000 0.00 0.00 0.00 1.52
291 292 2.819115 TGCGTCTGTACCGTGTTTAAA 58.181 42.857 0.00 0.00 0.00 1.52
292 293 3.193263 TGCGTCTGTACCGTGTTTAAAA 58.807 40.909 0.00 0.00 0.00 1.52
293 294 3.620374 TGCGTCTGTACCGTGTTTAAAAA 59.380 39.130 0.00 0.00 0.00 1.94
336 337 3.812156 TCTCACAAAGACAAGTCGGAA 57.188 42.857 0.00 0.00 34.09 4.30
340 341 3.559655 TCACAAAGACAAGTCGGAACATG 59.440 43.478 0.00 0.00 34.09 3.21
343 344 3.678056 AAGACAAGTCGGAACATGCTA 57.322 42.857 0.00 0.00 34.09 3.49
358 361 4.569943 ACATGCTATACCCAGATAAAGCG 58.430 43.478 0.00 0.00 32.67 4.68
581 587 3.152400 CTAACTACGCGGGCCCCT 61.152 66.667 18.66 0.45 0.00 4.79
620 626 2.355363 CACCGCGAAACGTCTCCA 60.355 61.111 8.23 0.00 41.42 3.86
622 628 0.457166 CACCGCGAAACGTCTCCATA 60.457 55.000 8.23 0.00 41.42 2.74
645 651 4.832608 GGTCCGTCGCATCCCCAC 62.833 72.222 0.00 0.00 0.00 4.61
646 652 4.077184 GTCCGTCGCATCCCCACA 62.077 66.667 0.00 0.00 0.00 4.17
647 653 3.080765 TCCGTCGCATCCCCACAT 61.081 61.111 0.00 0.00 0.00 3.21
648 654 2.896854 CCGTCGCATCCCCACATG 60.897 66.667 0.00 0.00 0.00 3.21
649 655 2.186644 CGTCGCATCCCCACATGA 59.813 61.111 0.00 0.00 0.00 3.07
650 656 1.449423 CGTCGCATCCCCACATGAA 60.449 57.895 0.00 0.00 0.00 2.57
651 657 1.705337 CGTCGCATCCCCACATGAAC 61.705 60.000 0.00 0.00 0.00 3.18
653 659 1.077501 CGCATCCCCACATGAACCT 60.078 57.895 0.00 0.00 0.00 3.50
686 696 2.571757 CCGCACGTGAGGCTAAGA 59.428 61.111 25.58 0.00 0.00 2.10
694 704 1.409064 CGTGAGGCTAAGACCTATGCA 59.591 52.381 0.00 0.00 41.32 3.96
714 724 2.911928 GGGTCCAGGAGCTTAGCC 59.088 66.667 18.34 0.54 0.00 3.93
789 799 2.093711 GCGCTGTTTATGGGGGAAAAAT 60.094 45.455 0.00 0.00 0.00 1.82
790 800 3.131400 GCGCTGTTTATGGGGGAAAAATA 59.869 43.478 0.00 0.00 0.00 1.40
1048 1068 2.915079 CGGTATGACCCATGCCCA 59.085 61.111 8.18 0.00 42.33 5.36
1080 1106 1.766461 CGGTTCAGGCCTCCCCTAT 60.766 63.158 0.00 0.00 44.09 2.57
1138 1166 3.735591 CCTCGTCTAGGTTTTGTTTCCA 58.264 45.455 0.00 0.00 40.94 3.53
1181 1209 2.484062 GGCCAATGGACCTGCGATG 61.484 63.158 2.05 0.00 0.00 3.84
1218 1246 2.207501 CTCTCCATGGCTGGGCTTGT 62.208 60.000 6.96 0.00 43.34 3.16
1237 1265 2.290641 TGTTAGATGCACGTTTGGGGAT 60.291 45.455 0.00 0.00 0.00 3.85
1238 1266 2.752903 GTTAGATGCACGTTTGGGGATT 59.247 45.455 0.00 0.00 0.00 3.01
1263 1291 1.296727 GGGTGCTGTCGGTAAATAGC 58.703 55.000 0.00 0.00 36.72 2.97
1277 1305 5.405571 CGGTAAATAGCATGTAGATTTCGCT 59.594 40.000 0.00 0.00 36.72 4.93
1287 1315 2.024176 AGATTTCGCTGCACGGTTAT 57.976 45.000 0.00 1.58 43.89 1.89
1302 1330 5.163652 GCACGGTTATGATTTTTAGCCTCTT 60.164 40.000 0.00 0.00 0.00 2.85
1339 1367 3.003897 TGGGCTTGTTTCATGTACGTTTC 59.996 43.478 0.00 0.00 0.00 2.78
1367 1396 1.264749 TGGCTATGGTTCGCTGTCCT 61.265 55.000 0.00 0.00 0.00 3.85
1384 1413 1.005097 TCCTGATGGCAATGAAGCTGT 59.995 47.619 0.00 0.00 34.17 4.40
1403 1432 4.637534 GCTGTGGTTATAGATGGGCATATG 59.362 45.833 0.00 0.00 0.00 1.78
1404 1433 5.571454 GCTGTGGTTATAGATGGGCATATGA 60.571 44.000 6.97 0.00 0.00 2.15
1405 1434 6.641161 TGTGGTTATAGATGGGCATATGAT 57.359 37.500 6.97 0.00 0.00 2.45
1406 1435 6.417258 TGTGGTTATAGATGGGCATATGATG 58.583 40.000 6.97 0.00 0.00 3.07
1408 1437 7.181845 TGTGGTTATAGATGGGCATATGATGTA 59.818 37.037 6.97 0.00 0.00 2.29
1409 1438 7.712639 GTGGTTATAGATGGGCATATGATGTAG 59.287 40.741 6.97 0.00 0.00 2.74
1410 1439 7.147497 TGGTTATAGATGGGCATATGATGTAGG 60.147 40.741 6.97 0.00 0.00 3.18
1411 1440 3.641434 AGATGGGCATATGATGTAGGC 57.359 47.619 6.97 0.00 0.00 3.93
1412 1441 2.914941 AGATGGGCATATGATGTAGGCA 59.085 45.455 6.97 0.00 0.00 4.75
1436 1469 1.818060 TGCGTGGAAAATCCTGGATTG 59.182 47.619 22.00 9.83 37.46 2.67
1453 1486 4.716784 TGGATTGTGTAGATTCTGCCTACT 59.283 41.667 0.00 0.00 37.84 2.57
1457 1490 3.701542 TGTGTAGATTCTGCCTACTCTGG 59.298 47.826 0.00 0.00 37.84 3.86
1461 1494 6.041069 GTGTAGATTCTGCCTACTCTGGTAAT 59.959 42.308 0.00 0.00 37.84 1.89
1516 1549 8.132362 ACGAGAGTGCTCTATTAATCTACTTTG 58.868 37.037 1.20 0.00 46.97 2.77
1605 1638 2.821969 CCTTGTGCTTCAATTGCTAGGT 59.178 45.455 0.00 0.00 35.35 3.08
1613 1647 5.157067 GCTTCAATTGCTAGGTTTGTTCTC 58.843 41.667 0.00 0.00 0.00 2.87
1621 1655 6.374417 TGCTAGGTTTGTTCTCTAAGGAAT 57.626 37.500 0.00 0.00 0.00 3.01
1626 1660 6.241645 AGGTTTGTTCTCTAAGGAATGAAGG 58.758 40.000 0.00 0.00 0.00 3.46
1627 1661 5.106118 GGTTTGTTCTCTAAGGAATGAAGGC 60.106 44.000 0.00 0.00 0.00 4.35
1631 1665 4.222124 TCTCTAAGGAATGAAGGCAACC 57.778 45.455 0.00 0.00 37.17 3.77
1739 1774 1.964223 AGAGTTCAACTTCAGCGGAGA 59.036 47.619 0.00 0.00 0.00 3.71
1755 1790 2.797156 CGGAGATGGCTTAATTGTCTCG 59.203 50.000 0.00 0.00 36.93 4.04
1761 1796 4.801330 TGGCTTAATTGTCTCGAGAGAA 57.199 40.909 25.21 25.21 41.32 2.87
1799 1834 2.817258 TCTGCGGTGTTTCCTATTTTGG 59.183 45.455 0.00 0.00 0.00 3.28
1980 2016 5.009010 AGTTGTTGATCTGTTGACATTGGTC 59.991 40.000 0.00 0.00 44.57 4.02
2013 2049 6.992123 TGTTTAGATATAGATTGTGGTGGCAG 59.008 38.462 0.00 0.00 0.00 4.85
2028 2064 4.355720 CAGCCTGGCAGGGAAGCA 62.356 66.667 33.43 0.00 35.37 3.91
2053 2089 1.214589 CCCGACGAGTTGGTACTGG 59.785 63.158 8.57 0.00 33.84 4.00
2237 2273 4.320608 TCTGTTTTTGGTCCATCTTTGC 57.679 40.909 0.00 0.00 0.00 3.68
2299 2335 8.367911 TGTACAATGGAATCCTCATGATACTAC 58.632 37.037 0.00 0.00 31.83 2.73
2338 2374 9.084533 GTGGATAGAGATACCTTCTTCATTACT 57.915 37.037 0.00 0.00 33.74 2.24
2371 2407 4.471386 ACAAGGGCTAGCAGAATCTCTTTA 59.529 41.667 18.24 0.00 0.00 1.85
2373 2409 3.389656 AGGGCTAGCAGAATCTCTTTACC 59.610 47.826 18.24 3.30 0.00 2.85
2401 2437 3.181479 TGCTAGGACCTGTGCTTATAACG 60.181 47.826 18.13 0.00 32.14 3.18
2418 2454 9.406828 GCTTATAACGACATGTGAATACTATCA 57.593 33.333 1.15 0.00 0.00 2.15
2467 2503 0.821301 TCGTTGGCCATTTGCACTGA 60.821 50.000 6.09 0.50 43.89 3.41
2546 2582 7.225341 GTCATAATTTCAAAATGGCAGATTCCC 59.775 37.037 0.00 0.00 0.00 3.97
2736 2772 5.596836 TGTTTGCAGAACTTTCCTTCAAT 57.403 34.783 11.34 0.00 0.00 2.57
2885 2921 2.294791 TCTATCTAAGCTGCGCCTCTTC 59.705 50.000 13.45 0.00 0.00 2.87
2899 2935 5.822519 TGCGCCTCTTCAGAAACATAATAAT 59.177 36.000 4.18 0.00 0.00 1.28
2992 3028 7.134815 CCGCTGTAATAGGAATTTCATCTTTG 58.865 38.462 0.00 0.00 0.00 2.77
3145 3181 8.477256 CAGGGATAGATCCTCTGAATTTATCTC 58.523 40.741 16.25 0.00 46.35 2.75
3370 3406 2.010582 CTACCGAGGTCAGCAGAGCC 62.011 65.000 4.52 0.00 43.21 4.70
3581 3618 2.990066 ACCCTGTTAGCTCAGCATAC 57.010 50.000 0.00 0.00 34.47 2.39
3638 3675 6.890268 TCTGTTCTCCTGATTTGTAGCTAGTA 59.110 38.462 0.00 0.00 0.00 1.82
3768 3805 7.200434 AGACATGGGAAGAACTTGTGTATAT 57.800 36.000 0.00 0.00 0.00 0.86
3832 3876 1.951792 CGTACTCGATGACTATGGCG 58.048 55.000 0.00 0.00 39.71 5.69
3836 3880 0.039074 CTCGATGACTATGGCGGGAC 60.039 60.000 0.00 0.00 0.00 4.46
3837 3881 0.753848 TCGATGACTATGGCGGGACA 60.754 55.000 0.00 0.00 0.00 4.02
3838 3882 0.318441 CGATGACTATGGCGGGACAT 59.682 55.000 0.00 0.00 34.90 3.06
3839 3883 1.544246 CGATGACTATGGCGGGACATA 59.456 52.381 0.00 0.00 32.39 2.29
3840 3884 2.671351 CGATGACTATGGCGGGACATAC 60.671 54.545 0.00 0.00 32.39 2.39
3841 3885 1.783071 TGACTATGGCGGGACATACA 58.217 50.000 0.00 0.00 32.39 2.29
3842 3886 2.325484 TGACTATGGCGGGACATACAT 58.675 47.619 0.00 0.00 32.39 2.29
3843 3887 2.703536 TGACTATGGCGGGACATACATT 59.296 45.455 0.00 0.00 32.39 2.71
3844 3888 3.898741 TGACTATGGCGGGACATACATTA 59.101 43.478 0.00 0.00 32.39 1.90
3845 3889 4.345547 TGACTATGGCGGGACATACATTAA 59.654 41.667 0.00 0.00 32.39 1.40
3846 3890 5.163290 TGACTATGGCGGGACATACATTAAA 60.163 40.000 0.00 0.00 32.39 1.52
3847 3891 5.876357 ACTATGGCGGGACATACATTAAAT 58.124 37.500 0.00 0.00 32.39 1.40
3848 3892 5.705441 ACTATGGCGGGACATACATTAAATG 59.295 40.000 0.00 0.00 32.39 2.32
3849 3893 4.157849 TGGCGGGACATACATTAAATGA 57.842 40.909 0.00 0.00 0.00 2.57
3850 3894 4.133820 TGGCGGGACATACATTAAATGAG 58.866 43.478 0.00 0.00 0.00 2.90
3851 3895 4.141597 TGGCGGGACATACATTAAATGAGA 60.142 41.667 0.00 0.00 0.00 3.27
3852 3896 4.452455 GGCGGGACATACATTAAATGAGAG 59.548 45.833 0.00 0.00 0.00 3.20
3853 3897 5.297547 GCGGGACATACATTAAATGAGAGA 58.702 41.667 0.00 0.00 0.00 3.10
3854 3898 5.758296 GCGGGACATACATTAAATGAGAGAA 59.242 40.000 0.00 0.00 0.00 2.87
3855 3899 6.073548 GCGGGACATACATTAAATGAGAGAAG 60.074 42.308 0.00 0.00 0.00 2.85
3856 3900 6.425114 CGGGACATACATTAAATGAGAGAAGG 59.575 42.308 0.00 0.00 0.00 3.46
3857 3901 6.712547 GGGACATACATTAAATGAGAGAAGGG 59.287 42.308 0.00 0.00 0.00 3.95
3981 4347 3.489785 GGTCATACTTCGAATGTAAGCCG 59.510 47.826 0.00 0.00 0.00 5.52
4017 4383 0.039978 TGTACAAAAATGCCGGTGCG 60.040 50.000 1.90 0.00 41.78 5.34
4071 4437 7.060383 AGCAGTATAGATAACATCAACAGCT 57.940 36.000 0.00 0.00 31.66 4.24
4166 4532 9.895138 ATATATGATTGACACAAGCTATATGCA 57.105 29.630 0.00 0.00 45.94 3.96
4324 4690 5.745769 GGAGCTATTTTTGCAAGACTTATGC 59.254 40.000 0.00 0.30 44.08 3.14
4339 4705 9.077674 CAAGACTTATGCGATAGGACATATAAC 57.922 37.037 0.00 0.00 41.52 1.89
4402 4768 5.765182 ACATCTGTAAGTTTCCTTGACCTTG 59.235 40.000 0.00 0.00 33.76 3.61
4466 4876 5.405935 AAACCTTGGAAGCATTACCATTC 57.594 39.130 0.00 0.00 36.02 2.67
4498 4909 7.655236 TGATTTTTCTTGGCAATACATTGTG 57.345 32.000 0.00 0.00 39.88 3.33
4515 4926 4.399004 TTGTGCTTGCAATTTTGTACCT 57.601 36.364 0.00 0.00 0.00 3.08
4537 4955 8.934023 ACCTATAAATTGTTTCCTCAAGTTCA 57.066 30.769 0.00 0.00 37.00 3.18
4538 4956 9.014297 ACCTATAAATTGTTTCCTCAAGTTCAG 57.986 33.333 0.00 0.00 37.00 3.02
4539 4957 9.014297 CCTATAAATTGTTTCCTCAAGTTCAGT 57.986 33.333 0.00 0.00 37.00 3.41
4542 4960 7.410120 AAATTGTTTCCTCAAGTTCAGTTCT 57.590 32.000 0.00 0.00 31.51 3.01
4559 4977 7.101652 TCAGTTCTACTGTCATATTCTGTCC 57.898 40.000 6.71 0.00 46.03 4.02
4575 4993 4.575885 TCTGTCCCTTGTGTAGTTTATGC 58.424 43.478 0.00 0.00 0.00 3.14
4633 5051 7.012327 CAGTAACACTACAAATATCACATGGGG 59.988 40.741 0.00 0.00 0.00 4.96
4663 5081 3.507786 TCGTTTCACTGATGACATACCG 58.492 45.455 0.00 0.00 33.38 4.02
4767 5187 6.645790 ACATCAGAAGTGAAAAGCTTTGAT 57.354 33.333 13.54 6.32 35.88 2.57
4980 5406 6.704310 TGTAAAAGTACCTTCCCTGATACAC 58.296 40.000 0.00 0.00 0.00 2.90
4986 5412 4.895668 ACCTTCCCTGATACACGTTTTA 57.104 40.909 0.00 0.00 0.00 1.52
4994 5420 8.314143 TCCCTGATACACGTTTTAAACTAAAG 57.686 34.615 6.27 0.00 0.00 1.85
5294 5728 2.893489 AGCAAAGTTCCAGATTTGGGTC 59.107 45.455 1.81 0.00 45.10 4.46
5336 5770 3.056607 TGATAAGCTTGGCAAAAGAAGGC 60.057 43.478 9.86 0.00 0.00 4.35
5343 5777 1.412343 TGGCAAAAGAAGGCAAGGTTC 59.588 47.619 0.00 0.00 38.71 3.62
6108 6556 3.774599 GATGGCCATGGACCCGGTC 62.775 68.421 26.56 9.30 0.00 4.79
6118 6566 3.819877 GACCCGGTCCAGTTTGCGT 62.820 63.158 6.25 0.00 0.00 5.24
6232 6702 1.694150 GATGTACATCCTAGCAGGCCA 59.306 52.381 22.97 0.00 34.61 5.36
6274 6744 7.841956 AGCAATTCTCTTGTAGTATGTGTACT 58.158 34.615 0.00 0.00 43.45 2.73
6275 6745 7.761704 AGCAATTCTCTTGTAGTATGTGTACTG 59.238 37.037 0.00 0.00 41.22 2.74
6393 6863 8.770010 AGCAACTATATAACTAGACAGGTTCT 57.230 34.615 0.00 0.00 38.51 3.01
6458 6928 9.261180 TGTCATAATGCTTATGTTAGCTCTTAC 57.739 33.333 12.59 0.00 42.77 2.34
6540 7013 9.528018 GTGTTATTTGTGAATTTTCTCTTCCAA 57.472 29.630 0.00 0.00 0.00 3.53
6545 7018 4.584325 TGTGAATTTTCTCTTCCAAGTGGG 59.416 41.667 0.00 0.00 35.41 4.61
6592 7084 3.397618 TGATTTTTCCTCTTCCAGGTGGA 59.602 43.478 0.00 0.00 43.95 4.02
6715 7314 7.602644 TGTTATTAAGACATCAAGCTTTCGAGT 59.397 33.333 0.00 0.00 0.00 4.18
6762 7361 6.222389 CAAGCAAAATACTTGTGGGAATCAA 58.778 36.000 0.00 0.00 39.73 2.57
6763 7362 6.610075 AGCAAAATACTTGTGGGAATCAAT 57.390 33.333 0.00 0.00 0.00 2.57
6764 7363 6.633856 AGCAAAATACTTGTGGGAATCAATC 58.366 36.000 0.00 0.00 0.00 2.67
6765 7364 6.211184 AGCAAAATACTTGTGGGAATCAATCA 59.789 34.615 0.00 0.00 0.00 2.57
6833 7432 2.649831 CAGTGAGGCTGGCATGTTT 58.350 52.632 3.38 0.00 41.42 2.83
6834 7433 0.963962 CAGTGAGGCTGGCATGTTTT 59.036 50.000 3.38 0.00 41.42 2.43
6835 7434 1.342174 CAGTGAGGCTGGCATGTTTTT 59.658 47.619 3.38 0.00 41.42 1.94
7126 7807 8.086522 TCAGGTTAATCAGTCAGTTACAGTTAC 58.913 37.037 0.00 0.00 0.00 2.50
7127 7808 7.061905 CAGGTTAATCAGTCAGTTACAGTTACG 59.938 40.741 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.893305 CCTATCACGTCTTAAAAGTTTGATTTT 57.107 29.630 0.00 0.00 36.40 1.82
10 11 9.063615 ACCTATCACGTCTTAAAAGTTTGATTT 57.936 29.630 0.00 0.00 0.00 2.17
11 12 8.617290 ACCTATCACGTCTTAAAAGTTTGATT 57.383 30.769 0.00 0.00 0.00 2.57
12 13 7.876068 TGACCTATCACGTCTTAAAAGTTTGAT 59.124 33.333 0.00 0.00 0.00 2.57
13 14 7.211573 TGACCTATCACGTCTTAAAAGTTTGA 58.788 34.615 0.00 0.00 0.00 2.69
14 15 7.416154 TGACCTATCACGTCTTAAAAGTTTG 57.584 36.000 0.00 0.00 0.00 2.93
15 16 8.504005 CAATGACCTATCACGTCTTAAAAGTTT 58.496 33.333 0.00 0.00 37.79 2.66
16 17 7.660208 ACAATGACCTATCACGTCTTAAAAGTT 59.340 33.333 0.00 0.00 37.79 2.66
17 18 7.159372 ACAATGACCTATCACGTCTTAAAAGT 58.841 34.615 0.00 0.00 37.79 2.66
18 19 7.545965 AGACAATGACCTATCACGTCTTAAAAG 59.454 37.037 5.71 0.00 43.55 2.27
19 20 7.330946 CAGACAATGACCTATCACGTCTTAAAA 59.669 37.037 7.96 0.00 43.55 1.52
20 21 6.811665 CAGACAATGACCTATCACGTCTTAAA 59.188 38.462 7.96 0.00 43.55 1.52
21 22 6.330278 CAGACAATGACCTATCACGTCTTAA 58.670 40.000 7.96 0.00 43.55 1.85
22 23 5.678871 GCAGACAATGACCTATCACGTCTTA 60.679 44.000 7.96 0.00 43.55 2.10
23 24 4.748892 CAGACAATGACCTATCACGTCTT 58.251 43.478 7.96 0.00 43.55 3.01
24 25 3.429547 GCAGACAATGACCTATCACGTCT 60.430 47.826 5.71 5.71 45.42 4.18
25 26 2.860735 GCAGACAATGACCTATCACGTC 59.139 50.000 0.00 0.00 39.40 4.34
26 27 2.735444 CGCAGACAATGACCTATCACGT 60.735 50.000 0.00 0.00 37.79 4.49
27 28 1.854743 CGCAGACAATGACCTATCACG 59.145 52.381 0.00 0.00 37.79 4.35
28 29 2.159099 TCCGCAGACAATGACCTATCAC 60.159 50.000 0.00 0.00 37.79 3.06
29 30 2.107366 TCCGCAGACAATGACCTATCA 58.893 47.619 0.00 0.00 39.83 2.15
30 31 2.474816 GTCCGCAGACAATGACCTATC 58.525 52.381 0.00 0.00 42.99 2.08
31 32 2.604046 GTCCGCAGACAATGACCTAT 57.396 50.000 0.00 0.00 42.99 2.57
46 47 2.738521 CAAGTCTGGGCGTGTCCG 60.739 66.667 0.00 0.00 34.94 4.79
47 48 1.668151 GACAAGTCTGGGCGTGTCC 60.668 63.158 9.44 0.00 40.34 4.02
48 49 1.367840 AGACAAGTCTGGGCGTGTC 59.632 57.895 11.98 11.98 44.33 3.67
49 50 3.550974 AGACAAGTCTGGGCGTGT 58.449 55.556 1.20 0.00 38.75 4.49
63 64 1.026718 CCCCTCAAATGTCCGCAGAC 61.027 60.000 0.00 0.00 43.83 3.51
64 65 1.299648 CCCCTCAAATGTCCGCAGA 59.700 57.895 0.00 0.00 0.00 4.26
65 66 1.750399 CCCCCTCAAATGTCCGCAG 60.750 63.158 0.00 0.00 0.00 5.18
66 67 2.354729 CCCCCTCAAATGTCCGCA 59.645 61.111 0.00 0.00 0.00 5.69
67 68 3.140814 GCCCCCTCAAATGTCCGC 61.141 66.667 0.00 0.00 0.00 5.54
68 69 2.824041 CGCCCCCTCAAATGTCCG 60.824 66.667 0.00 0.00 0.00 4.79
69 70 2.440247 CCGCCCCCTCAAATGTCC 60.440 66.667 0.00 0.00 0.00 4.02
70 71 2.440247 CCCGCCCCCTCAAATGTC 60.440 66.667 0.00 0.00 0.00 3.06
71 72 2.380571 AAACCCGCCCCCTCAAATGT 62.381 55.000 0.00 0.00 0.00 2.71
72 73 1.609210 AAACCCGCCCCCTCAAATG 60.609 57.895 0.00 0.00 0.00 2.32
73 74 1.609210 CAAACCCGCCCCCTCAAAT 60.609 57.895 0.00 0.00 0.00 2.32
74 75 2.203567 CAAACCCGCCCCCTCAAA 60.204 61.111 0.00 0.00 0.00 2.69
75 76 4.986708 GCAAACCCGCCCCCTCAA 62.987 66.667 0.00 0.00 0.00 3.02
80 81 3.905437 TACTTCGCAAACCCGCCCC 62.905 63.158 0.00 0.00 0.00 5.80
81 82 2.358984 TACTTCGCAAACCCGCCC 60.359 61.111 0.00 0.00 0.00 6.13
82 83 2.865308 GTACTTCGCAAACCCGCC 59.135 61.111 0.00 0.00 0.00 6.13
83 84 2.023223 TCGTACTTCGCAAACCCGC 61.023 57.895 0.00 0.00 39.67 6.13
84 85 0.665369 AGTCGTACTTCGCAAACCCG 60.665 55.000 0.00 0.00 39.67 5.28
85 86 0.788391 CAGTCGTACTTCGCAAACCC 59.212 55.000 0.00 0.00 39.67 4.11
86 87 1.494824 ACAGTCGTACTTCGCAAACC 58.505 50.000 0.00 0.00 39.67 3.27
87 88 5.172771 GGATATACAGTCGTACTTCGCAAAC 59.827 44.000 0.00 0.00 39.67 2.93
88 89 5.066893 AGGATATACAGTCGTACTTCGCAAA 59.933 40.000 0.00 0.00 39.67 3.68
89 90 4.577693 AGGATATACAGTCGTACTTCGCAA 59.422 41.667 0.00 0.00 39.67 4.85
90 91 4.132336 AGGATATACAGTCGTACTTCGCA 58.868 43.478 0.00 0.00 39.67 5.10
91 92 4.451774 AGAGGATATACAGTCGTACTTCGC 59.548 45.833 0.00 0.00 39.67 4.70
92 93 6.542574 AAGAGGATATACAGTCGTACTTCG 57.457 41.667 0.00 0.00 41.41 3.79
93 94 8.281893 GTGTAAGAGGATATACAGTCGTACTTC 58.718 40.741 0.00 0.00 32.98 3.01
94 95 7.228308 GGTGTAAGAGGATATACAGTCGTACTT 59.772 40.741 0.00 0.00 32.98 2.24
95 96 6.709846 GGTGTAAGAGGATATACAGTCGTACT 59.290 42.308 0.00 0.00 32.98 2.73
96 97 6.072783 GGGTGTAAGAGGATATACAGTCGTAC 60.073 46.154 0.00 0.00 32.98 3.67
97 98 6.000219 GGGTGTAAGAGGATATACAGTCGTA 59.000 44.000 0.00 0.00 32.98 3.43
98 99 4.826183 GGGTGTAAGAGGATATACAGTCGT 59.174 45.833 0.00 0.00 32.98 4.34
99 100 5.048643 CAGGGTGTAAGAGGATATACAGTCG 60.049 48.000 0.00 0.00 32.98 4.18
100 101 6.069331 TCAGGGTGTAAGAGGATATACAGTC 58.931 44.000 0.00 0.00 32.98 3.51
101 102 6.027025 TCAGGGTGTAAGAGGATATACAGT 57.973 41.667 0.00 0.00 32.98 3.55
102 103 6.978674 TTCAGGGTGTAAGAGGATATACAG 57.021 41.667 0.00 0.00 32.98 2.74
103 104 6.670464 TGTTTCAGGGTGTAAGAGGATATACA 59.330 38.462 0.00 0.00 0.00 2.29
104 105 7.120923 TGTTTCAGGGTGTAAGAGGATATAC 57.879 40.000 0.00 0.00 0.00 1.47
105 106 7.567250 TCATGTTTCAGGGTGTAAGAGGATATA 59.433 37.037 0.00 0.00 0.00 0.86
106 107 6.386927 TCATGTTTCAGGGTGTAAGAGGATAT 59.613 38.462 0.00 0.00 0.00 1.63
107 108 5.724370 TCATGTTTCAGGGTGTAAGAGGATA 59.276 40.000 0.00 0.00 0.00 2.59
108 109 4.536090 TCATGTTTCAGGGTGTAAGAGGAT 59.464 41.667 0.00 0.00 0.00 3.24
109 110 3.907474 TCATGTTTCAGGGTGTAAGAGGA 59.093 43.478 0.00 0.00 0.00 3.71
110 111 4.286297 TCATGTTTCAGGGTGTAAGAGG 57.714 45.455 0.00 0.00 0.00 3.69
111 112 4.878397 GGATCATGTTTCAGGGTGTAAGAG 59.122 45.833 0.00 0.00 0.00 2.85
112 113 4.324254 GGGATCATGTTTCAGGGTGTAAGA 60.324 45.833 0.00 0.00 0.00 2.10
113 114 3.947834 GGGATCATGTTTCAGGGTGTAAG 59.052 47.826 0.00 0.00 0.00 2.34
114 115 3.591527 AGGGATCATGTTTCAGGGTGTAA 59.408 43.478 0.00 0.00 0.00 2.41
115 116 3.189606 AGGGATCATGTTTCAGGGTGTA 58.810 45.455 0.00 0.00 0.00 2.90
116 117 1.995542 AGGGATCATGTTTCAGGGTGT 59.004 47.619 0.00 0.00 0.00 4.16
117 118 2.814805 AGGGATCATGTTTCAGGGTG 57.185 50.000 0.00 0.00 0.00 4.61
118 119 3.833559 AAAGGGATCATGTTTCAGGGT 57.166 42.857 0.00 0.00 0.00 4.34
119 120 3.627577 CGTAAAGGGATCATGTTTCAGGG 59.372 47.826 0.00 0.00 0.00 4.45
120 121 4.261801 ACGTAAAGGGATCATGTTTCAGG 58.738 43.478 0.00 0.00 0.00 3.86
121 122 5.880054 AACGTAAAGGGATCATGTTTCAG 57.120 39.130 0.00 0.00 0.00 3.02
122 123 6.938030 ACTAAACGTAAAGGGATCATGTTTCA 59.062 34.615 4.18 0.00 34.26 2.69
123 124 7.373778 ACTAAACGTAAAGGGATCATGTTTC 57.626 36.000 4.18 0.00 34.26 2.78
124 125 7.754851 AACTAAACGTAAAGGGATCATGTTT 57.245 32.000 0.00 0.48 35.93 2.83
125 126 8.724229 GTTAACTAAACGTAAAGGGATCATGTT 58.276 33.333 0.00 0.00 0.00 2.71
126 127 7.879160 TGTTAACTAAACGTAAAGGGATCATGT 59.121 33.333 7.22 0.00 41.30 3.21
127 128 8.173130 GTGTTAACTAAACGTAAAGGGATCATG 58.827 37.037 7.22 0.00 41.30 3.07
128 129 8.098912 AGTGTTAACTAAACGTAAAGGGATCAT 58.901 33.333 7.22 0.00 41.30 2.45
129 130 7.444299 AGTGTTAACTAAACGTAAAGGGATCA 58.556 34.615 7.22 0.00 41.30 2.92
130 131 7.063898 GGAGTGTTAACTAAACGTAAAGGGATC 59.936 40.741 7.22 0.00 41.30 3.36
131 132 6.875726 GGAGTGTTAACTAAACGTAAAGGGAT 59.124 38.462 7.22 0.00 41.30 3.85
132 133 6.041979 AGGAGTGTTAACTAAACGTAAAGGGA 59.958 38.462 7.22 0.00 41.30 4.20
133 134 6.226052 AGGAGTGTTAACTAAACGTAAAGGG 58.774 40.000 7.22 0.00 41.30 3.95
134 135 6.925165 TGAGGAGTGTTAACTAAACGTAAAGG 59.075 38.462 7.22 0.00 41.30 3.11
135 136 7.935338 TGAGGAGTGTTAACTAAACGTAAAG 57.065 36.000 7.22 0.00 41.30 1.85
136 137 8.715191 TTTGAGGAGTGTTAACTAAACGTAAA 57.285 30.769 7.22 0.00 41.30 2.01
137 138 8.603181 GTTTTGAGGAGTGTTAACTAAACGTAA 58.397 33.333 7.22 0.00 41.30 3.18
138 139 7.763528 TGTTTTGAGGAGTGTTAACTAAACGTA 59.236 33.333 7.22 0.00 41.30 3.57
139 140 6.594937 TGTTTTGAGGAGTGTTAACTAAACGT 59.405 34.615 7.22 0.00 41.30 3.99
140 141 7.007313 TGTTTTGAGGAGTGTTAACTAAACG 57.993 36.000 7.22 0.00 41.30 3.60
141 142 9.628746 TTTTGTTTTGAGGAGTGTTAACTAAAC 57.371 29.630 7.22 0.00 36.52 2.01
142 143 9.628746 GTTTTGTTTTGAGGAGTGTTAACTAAA 57.371 29.630 7.22 0.00 36.52 1.85
143 144 8.794553 TGTTTTGTTTTGAGGAGTGTTAACTAA 58.205 29.630 7.22 0.00 36.52 2.24
144 145 8.238631 GTGTTTTGTTTTGAGGAGTGTTAACTA 58.761 33.333 7.22 0.00 36.52 2.24
145 146 7.088272 GTGTTTTGTTTTGAGGAGTGTTAACT 58.912 34.615 7.22 0.00 40.21 2.24
146 147 6.033091 CGTGTTTTGTTTTGAGGAGTGTTAAC 59.967 38.462 0.00 0.00 0.00 2.01
147 148 6.072618 TCGTGTTTTGTTTTGAGGAGTGTTAA 60.073 34.615 0.00 0.00 0.00 2.01
148 149 5.411977 TCGTGTTTTGTTTTGAGGAGTGTTA 59.588 36.000 0.00 0.00 0.00 2.41
149 150 4.216687 TCGTGTTTTGTTTTGAGGAGTGTT 59.783 37.500 0.00 0.00 0.00 3.32
150 151 3.754323 TCGTGTTTTGTTTTGAGGAGTGT 59.246 39.130 0.00 0.00 0.00 3.55
151 152 4.095610 GTCGTGTTTTGTTTTGAGGAGTG 58.904 43.478 0.00 0.00 0.00 3.51
152 153 3.754323 TGTCGTGTTTTGTTTTGAGGAGT 59.246 39.130 0.00 0.00 0.00 3.85
153 154 4.349663 TGTCGTGTTTTGTTTTGAGGAG 57.650 40.909 0.00 0.00 0.00 3.69
154 155 4.456222 TCTTGTCGTGTTTTGTTTTGAGGA 59.544 37.500 0.00 0.00 0.00 3.71
155 156 4.728534 TCTTGTCGTGTTTTGTTTTGAGG 58.271 39.130 0.00 0.00 0.00 3.86
156 157 7.357532 GCATATCTTGTCGTGTTTTGTTTTGAG 60.358 37.037 0.00 0.00 0.00 3.02
157 158 6.416455 GCATATCTTGTCGTGTTTTGTTTTGA 59.584 34.615 0.00 0.00 0.00 2.69
158 159 6.345723 GGCATATCTTGTCGTGTTTTGTTTTG 60.346 38.462 0.00 0.00 0.00 2.44
159 160 5.689961 GGCATATCTTGTCGTGTTTTGTTTT 59.310 36.000 0.00 0.00 0.00 2.43
160 161 5.219633 GGCATATCTTGTCGTGTTTTGTTT 58.780 37.500 0.00 0.00 0.00 2.83
161 162 4.794169 GGCATATCTTGTCGTGTTTTGTT 58.206 39.130 0.00 0.00 0.00 2.83
162 163 4.419522 GGCATATCTTGTCGTGTTTTGT 57.580 40.909 0.00 0.00 0.00 2.83
171 172 3.067461 AGACTGAGTCGGCATATCTTGTC 59.933 47.826 6.99 0.00 37.67 3.18
172 173 3.027412 AGACTGAGTCGGCATATCTTGT 58.973 45.455 6.99 0.00 37.67 3.16
173 174 3.724508 AGACTGAGTCGGCATATCTTG 57.275 47.619 6.99 0.00 37.67 3.02
174 175 4.160439 TGAAAGACTGAGTCGGCATATCTT 59.840 41.667 6.99 0.00 37.67 2.40
175 176 3.701542 TGAAAGACTGAGTCGGCATATCT 59.298 43.478 6.99 0.00 37.67 1.98
176 177 4.046938 TGAAAGACTGAGTCGGCATATC 57.953 45.455 6.99 1.87 37.67 1.63
177 178 3.701542 TCTGAAAGACTGAGTCGGCATAT 59.298 43.478 6.99 0.00 38.67 1.78
178 179 3.089284 TCTGAAAGACTGAGTCGGCATA 58.911 45.455 6.99 0.00 38.67 3.14
179 180 1.895798 TCTGAAAGACTGAGTCGGCAT 59.104 47.619 6.99 0.00 38.67 4.40
180 181 1.328279 TCTGAAAGACTGAGTCGGCA 58.672 50.000 6.99 6.00 38.67 5.69
192 193 7.093354 TCTATTCCTATAAGCGCATCTGAAAG 58.907 38.462 11.47 5.50 0.00 2.62
193 194 6.993079 TCTATTCCTATAAGCGCATCTGAAA 58.007 36.000 11.47 0.00 0.00 2.69
194 195 6.590234 TCTATTCCTATAAGCGCATCTGAA 57.410 37.500 11.47 4.82 0.00 3.02
195 196 6.590234 TTCTATTCCTATAAGCGCATCTGA 57.410 37.500 11.47 0.00 0.00 3.27
196 197 7.658179 TTTTCTATTCCTATAAGCGCATCTG 57.342 36.000 11.47 0.00 0.00 2.90
197 198 7.148340 GCATTTTCTATTCCTATAAGCGCATCT 60.148 37.037 11.47 0.00 0.00 2.90
198 199 6.963805 GCATTTTCTATTCCTATAAGCGCATC 59.036 38.462 11.47 0.00 0.00 3.91
199 200 6.402550 CGCATTTTCTATTCCTATAAGCGCAT 60.403 38.462 11.47 0.00 33.84 4.73
200 201 5.107104 CGCATTTTCTATTCCTATAAGCGCA 60.107 40.000 11.47 0.00 33.84 6.09
201 202 5.107065 ACGCATTTTCTATTCCTATAAGCGC 60.107 40.000 0.00 0.00 43.49 5.92
202 203 6.073765 ACACGCATTTTCTATTCCTATAAGCG 60.074 38.462 0.00 0.00 44.98 4.68
203 204 7.072030 CACACGCATTTTCTATTCCTATAAGC 58.928 38.462 0.00 0.00 0.00 3.09
204 205 8.064222 CACACACGCATTTTCTATTCCTATAAG 58.936 37.037 0.00 0.00 0.00 1.73
205 206 7.466725 GCACACACGCATTTTCTATTCCTATAA 60.467 37.037 0.00 0.00 0.00 0.98
206 207 6.018262 GCACACACGCATTTTCTATTCCTATA 60.018 38.462 0.00 0.00 0.00 1.31
207 208 5.220854 GCACACACGCATTTTCTATTCCTAT 60.221 40.000 0.00 0.00 0.00 2.57
208 209 4.094294 GCACACACGCATTTTCTATTCCTA 59.906 41.667 0.00 0.00 0.00 2.94
209 210 3.119849 GCACACACGCATTTTCTATTCCT 60.120 43.478 0.00 0.00 0.00 3.36
210 211 3.171277 GCACACACGCATTTTCTATTCC 58.829 45.455 0.00 0.00 0.00 3.01
211 212 2.840176 CGCACACACGCATTTTCTATTC 59.160 45.455 0.00 0.00 0.00 1.75
212 213 2.225491 ACGCACACACGCATTTTCTATT 59.775 40.909 0.00 0.00 36.19 1.73
213 214 1.804151 ACGCACACACGCATTTTCTAT 59.196 42.857 0.00 0.00 36.19 1.98
214 215 1.222300 ACGCACACACGCATTTTCTA 58.778 45.000 0.00 0.00 36.19 2.10
215 216 0.380378 AACGCACACACGCATTTTCT 59.620 45.000 0.00 0.00 36.19 2.52
216 217 1.196200 AAACGCACACACGCATTTTC 58.804 45.000 0.00 0.00 36.19 2.29
217 218 2.476873 TAAACGCACACACGCATTTT 57.523 40.000 0.00 0.00 36.19 1.82
218 219 2.697431 ATAAACGCACACACGCATTT 57.303 40.000 0.00 0.00 36.19 2.32
219 220 2.095213 CCTATAAACGCACACACGCATT 59.905 45.455 0.00 0.00 36.19 3.56
220 221 1.663643 CCTATAAACGCACACACGCAT 59.336 47.619 0.00 0.00 36.19 4.73
221 222 1.072391 CCTATAAACGCACACACGCA 58.928 50.000 0.00 0.00 36.19 5.24
222 223 0.372334 CCCTATAAACGCACACACGC 59.628 55.000 0.00 0.00 36.19 5.34
223 224 1.999048 TCCCTATAAACGCACACACG 58.001 50.000 0.00 0.00 39.50 4.49
224 225 4.025145 GCTTATCCCTATAAACGCACACAC 60.025 45.833 0.00 0.00 0.00 3.82
225 226 4.124238 GCTTATCCCTATAAACGCACACA 58.876 43.478 0.00 0.00 0.00 3.72
226 227 3.183775 CGCTTATCCCTATAAACGCACAC 59.816 47.826 0.00 0.00 32.31 3.82
227 228 3.181473 ACGCTTATCCCTATAAACGCACA 60.181 43.478 0.00 0.00 39.59 4.57
228 229 3.387397 ACGCTTATCCCTATAAACGCAC 58.613 45.455 0.00 0.00 39.59 5.34
229 230 3.738830 ACGCTTATCCCTATAAACGCA 57.261 42.857 0.00 0.00 39.59 5.24
230 231 4.032558 GCATACGCTTATCCCTATAAACGC 59.967 45.833 0.00 0.00 39.59 4.84
231 232 4.264614 CGCATACGCTTATCCCTATAAACG 59.735 45.833 0.00 0.00 41.01 3.60
232 233 5.697848 CGCATACGCTTATCCCTATAAAC 57.302 43.478 0.00 0.00 35.30 2.01
247 248 1.317611 GCTCATATACACGCGCATACG 59.682 52.381 5.73 0.00 44.07 3.06
248 249 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
249 250 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
250 251 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
251 252 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
255 256 0.159554 CGCAAGCGCTCATATACACG 59.840 55.000 12.06 2.00 35.30 4.49
256 257 1.190323 GACGCAAGCGCTCATATACAC 59.810 52.381 12.06 0.00 44.19 2.90
257 258 1.067060 AGACGCAAGCGCTCATATACA 59.933 47.619 12.06 0.00 44.19 2.29
258 259 1.453524 CAGACGCAAGCGCTCATATAC 59.546 52.381 12.06 1.00 44.19 1.47
259 260 1.067060 ACAGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
260 261 0.179100 ACAGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
261 262 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
262 263 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
263 264 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
264 265 2.445438 GGTACAGACGCAAGCGCTC 61.445 63.158 12.06 11.06 44.19 5.03
265 266 2.432628 GGTACAGACGCAAGCGCT 60.433 61.111 15.09 2.64 44.19 5.92
266 267 3.838795 CGGTACAGACGCAAGCGC 61.839 66.667 15.09 0.00 44.19 5.92
267 268 2.430244 ACGGTACAGACGCAAGCG 60.430 61.111 13.50 13.50 46.03 4.68
268 269 1.219522 AACACGGTACAGACGCAAGC 61.220 55.000 0.00 0.00 45.62 4.01
270 271 2.505628 TAAACACGGTACAGACGCAA 57.494 45.000 0.00 0.00 34.00 4.85
271 272 2.505628 TTAAACACGGTACAGACGCA 57.494 45.000 0.00 0.00 34.00 5.24
272 273 3.857923 TTTTAAACACGGTACAGACGC 57.142 42.857 0.00 0.00 34.00 5.19
291 292 5.240623 TCAGAATAGATTGCCGTGTGTTTTT 59.759 36.000 0.00 0.00 0.00 1.94
292 293 4.759693 TCAGAATAGATTGCCGTGTGTTTT 59.240 37.500 0.00 0.00 0.00 2.43
293 294 4.323417 TCAGAATAGATTGCCGTGTGTTT 58.677 39.130 0.00 0.00 0.00 2.83
294 295 3.937814 TCAGAATAGATTGCCGTGTGTT 58.062 40.909 0.00 0.00 0.00 3.32
295 296 3.610040 TCAGAATAGATTGCCGTGTGT 57.390 42.857 0.00 0.00 0.00 3.72
296 297 4.375272 AGATCAGAATAGATTGCCGTGTG 58.625 43.478 0.00 0.00 0.00 3.82
336 337 4.283467 TCGCTTTATCTGGGTATAGCATGT 59.717 41.667 4.02 0.00 30.89 3.21
340 341 4.739195 CTCTCGCTTTATCTGGGTATAGC 58.261 47.826 0.00 0.00 0.00 2.97
343 344 2.300437 GGCTCTCGCTTTATCTGGGTAT 59.700 50.000 0.00 0.00 36.09 2.73
358 361 1.066587 CGTCCATTCTCGGGCTCTC 59.933 63.158 0.00 0.00 0.00 3.20
366 369 2.856720 GCGAGAGTCATCGTCCATTCTC 60.857 54.545 11.76 0.00 44.53 2.87
581 587 0.108089 TAAAAGCTGGGCGCGATGTA 60.108 50.000 12.10 0.00 45.59 2.29
591 597 2.686816 CGCGGTGGGTAAAAGCTGG 61.687 63.158 0.00 0.00 0.00 4.85
592 598 1.231958 TTCGCGGTGGGTAAAAGCTG 61.232 55.000 6.13 0.00 0.00 4.24
620 626 3.214845 GCGACGGACCGGGTCTAT 61.215 66.667 25.39 14.44 32.47 1.98
642 648 2.233922 AGACCGTAGAAGGTTCATGTGG 59.766 50.000 0.00 0.00 46.09 4.17
645 651 4.113354 GCTAAGACCGTAGAAGGTTCATG 58.887 47.826 0.00 0.00 46.09 3.07
646 652 3.181489 CGCTAAGACCGTAGAAGGTTCAT 60.181 47.826 0.00 0.00 46.09 2.57
647 653 2.163010 CGCTAAGACCGTAGAAGGTTCA 59.837 50.000 0.00 0.00 46.09 3.18
648 654 2.795117 CGCTAAGACCGTAGAAGGTTC 58.205 52.381 0.00 0.00 46.09 3.62
649 655 1.135170 GCGCTAAGACCGTAGAAGGTT 60.135 52.381 0.00 0.00 46.09 3.50
651 657 0.248949 GGCGCTAAGACCGTAGAAGG 60.249 60.000 7.64 0.00 37.30 3.46
653 659 1.430632 CGGCGCTAAGACCGTAGAA 59.569 57.895 7.64 0.00 44.46 2.10
686 696 2.285069 TGGACCCGGTGCATAGGT 60.285 61.111 7.84 5.06 36.31 3.08
694 704 1.686110 CTAAGCTCCTGGACCCGGT 60.686 63.158 0.00 0.00 0.00 5.28
953 973 3.155167 GTCCCCGGCGGAGAGAAT 61.155 66.667 30.79 0.00 43.19 2.40
1118 1146 3.186613 GCTGGAAACAAAACCTAGACGAG 59.813 47.826 0.00 0.00 42.06 4.18
1138 1166 4.083164 CCAATTTACGAAAACCTAACCGCT 60.083 41.667 0.00 0.00 0.00 5.52
1218 1246 2.799126 ATCCCCAAACGTGCATCTAA 57.201 45.000 0.00 0.00 0.00 2.10
1263 1291 1.004610 CCGTGCAGCGAAATCTACATG 60.005 52.381 9.75 0.00 44.77 3.21
1277 1305 4.013728 AGGCTAAAAATCATAACCGTGCA 58.986 39.130 0.00 0.00 0.00 4.57
1287 1315 1.130373 CGCGCAAGAGGCTAAAAATCA 59.870 47.619 8.75 0.00 41.67 2.57
1306 1334 2.110967 CAAGCCCAGGATGAGCACG 61.111 63.158 0.00 0.00 39.69 5.34
1339 1367 3.243068 GCGAACCATAGCCACCATAAAAG 60.243 47.826 0.00 0.00 0.00 2.27
1367 1396 1.179152 CCACAGCTTCATTGCCATCA 58.821 50.000 0.00 0.00 0.00 3.07
1384 1413 6.641161 ACATCATATGCCCATCTATAACCA 57.359 37.500 0.00 0.00 0.00 3.67
1403 1432 0.882042 CCACGCATCCTGCCTACATC 60.882 60.000 0.00 0.00 41.12 3.06
1404 1433 1.146930 CCACGCATCCTGCCTACAT 59.853 57.895 0.00 0.00 41.12 2.29
1405 1434 1.549243 TTCCACGCATCCTGCCTACA 61.549 55.000 0.00 0.00 41.12 2.74
1406 1435 0.392461 TTTCCACGCATCCTGCCTAC 60.392 55.000 0.00 0.00 41.12 3.18
1408 1437 0.323725 ATTTTCCACGCATCCTGCCT 60.324 50.000 0.00 0.00 41.12 4.75
1409 1438 0.101219 GATTTTCCACGCATCCTGCC 59.899 55.000 0.00 0.00 41.12 4.85
1410 1439 0.101219 GGATTTTCCACGCATCCTGC 59.899 55.000 0.00 0.00 36.87 4.85
1411 1440 1.755179 AGGATTTTCCACGCATCCTG 58.245 50.000 0.00 0.00 44.41 3.86
1412 1441 1.683011 CCAGGATTTTCCACGCATCCT 60.683 52.381 0.00 0.00 46.64 3.24
1422 1455 7.680588 GCAGAATCTACACAATCCAGGATTTTC 60.681 40.741 12.49 11.40 28.87 2.29
1436 1469 3.702045 ACCAGAGTAGGCAGAATCTACAC 59.298 47.826 0.00 0.00 39.48 2.90
1453 1486 8.148351 GCCATATACTAGTGAAACATTACCAGA 58.852 37.037 5.39 0.00 41.43 3.86
1461 1494 6.677781 GCAAAGCCATATACTAGTGAAACA 57.322 37.500 5.39 0.00 41.43 2.83
1488 1521 5.351233 AGATTAATAGAGCACTCTCGTCG 57.649 43.478 2.82 0.00 44.02 5.12
1553 1586 8.629158 CCCAAGGATTCAATCATAACGAATTAA 58.371 33.333 0.00 0.00 29.67 1.40
1569 1602 2.558359 CACAAGGTTGACCCAAGGATTC 59.442 50.000 0.00 0.00 36.42 2.52
1605 1638 5.630121 TGCCTTCATTCCTTAGAGAACAAA 58.370 37.500 0.00 0.00 0.00 2.83
1613 1647 2.985896 TCGGTTGCCTTCATTCCTTAG 58.014 47.619 0.00 0.00 0.00 2.18
1621 1655 3.305064 GCAAGTAATTTCGGTTGCCTTCA 60.305 43.478 0.00 0.00 39.52 3.02
1626 1660 4.089923 GTGAATGCAAGTAATTTCGGTTGC 59.910 41.667 0.00 0.00 44.53 4.17
1627 1661 5.460646 AGTGAATGCAAGTAATTTCGGTTG 58.539 37.500 0.00 0.00 0.00 3.77
1631 1665 9.988350 AGTAAATAGTGAATGCAAGTAATTTCG 57.012 29.630 0.00 0.00 0.00 3.46
1725 1760 0.392193 AGCCATCTCCGCTGAAGTTG 60.392 55.000 0.00 0.00 34.56 3.16
1739 1774 5.127845 TCTTCTCTCGAGACAATTAAGCCAT 59.872 40.000 12.08 0.00 37.14 4.40
1755 1790 4.023291 AGACCTGGAGTTGATCTTCTCTC 58.977 47.826 0.00 7.63 0.00 3.20
1761 1796 2.235898 GCAGAAGACCTGGAGTTGATCT 59.764 50.000 0.00 0.00 43.13 2.75
1799 1834 1.197036 GGTTTGAAGCAAGCTACCGAC 59.803 52.381 0.00 0.00 0.00 4.79
1892 1928 1.338200 ACCAACAATCGCACTCCTCTC 60.338 52.381 0.00 0.00 0.00 3.20
1900 1936 2.287308 GCACTTTGTACCAACAATCGCA 60.287 45.455 0.00 0.00 44.85 5.10
2013 2049 2.832201 GATGCTTCCCTGCCAGGC 60.832 66.667 4.81 3.66 32.73 4.85
2028 2064 0.460311 CCAACTCGTCGGGCTAAGAT 59.540 55.000 0.00 0.00 0.00 2.40
2198 2234 9.911788 AAAAACAGATCAGAGAATATACCATGT 57.088 29.630 0.00 0.00 0.00 3.21
2213 2249 5.509501 GCAAAGATGGACCAAAAACAGATCA 60.510 40.000 0.00 0.00 0.00 2.92
2237 2273 2.293122 TCAAAACACTTGCATCTTCCCG 59.707 45.455 0.00 0.00 0.00 5.14
2299 2335 9.522804 GTATCTCTATCCACTGTAGAAAAACTG 57.477 37.037 0.00 0.00 0.00 3.16
2338 2374 3.181445 TGCTAGCCCTTGTGAAAGAAAGA 60.181 43.478 13.29 0.00 0.00 2.52
2371 2407 1.007721 ACAGGTCCTAGCAGATGAGGT 59.992 52.381 0.00 0.00 34.20 3.85
2373 2409 1.202510 GCACAGGTCCTAGCAGATGAG 60.203 57.143 9.94 0.00 0.00 2.90
2401 2437 7.708322 ACATGACAGTGATAGTATTCACATGTC 59.292 37.037 19.10 19.10 46.81 3.06
2418 2454 3.007940 TCGATGGAAAAGGACATGACAGT 59.992 43.478 0.00 0.00 0.00 3.55
2546 2582 7.050377 ACCATGATACCATCTGAAAAGTAGTG 58.950 38.462 0.00 0.00 0.00 2.74
2736 2772 3.096852 TCTGGAACTGATAAGAGGCGAA 58.903 45.455 0.00 0.00 0.00 4.70
2794 2830 4.046462 CCGAACTCTCTCGTTAACAACAA 58.954 43.478 6.39 0.00 37.11 2.83
2992 3028 9.834628 TCGGTATGAATATGAGAAAACAAAAAC 57.165 29.630 0.00 0.00 0.00 2.43
2998 3034 7.484035 AGCTTCGGTATGAATATGAGAAAAC 57.516 36.000 0.00 0.00 35.63 2.43
3013 3049 7.119992 TGTCTGCAATTATTTTTAGCTTCGGTA 59.880 33.333 0.00 0.00 0.00 4.02
3145 3181 6.764877 ACAATACAAAACACGACTCTGTAG 57.235 37.500 0.00 0.00 0.00 2.74
3370 3406 3.947910 AGGATTCACATTTGCACCTTG 57.052 42.857 0.00 0.00 0.00 3.61
3581 3618 3.261580 TCATCAAGACATGTTGGTAGCG 58.738 45.455 0.00 0.00 31.00 4.26
3638 3675 7.236640 ACCCACCAGGACATGTAAAATAAATTT 59.763 33.333 0.00 0.00 39.89 1.82
3768 3805 6.056090 TGTGGTCCTTAATACTGTGCAATA 57.944 37.500 0.00 0.00 0.00 1.90
3811 3855 1.267261 GCCATAGTCATCGAGTACGCT 59.733 52.381 0.00 0.00 39.58 5.07
3832 3876 6.712547 CCCTTCTCTCATTTAATGTATGTCCC 59.287 42.308 4.77 0.00 0.00 4.46
3836 3880 7.389053 GGCTACCCTTCTCTCATTTAATGTATG 59.611 40.741 4.77 0.00 0.00 2.39
3837 3881 7.454225 GGCTACCCTTCTCTCATTTAATGTAT 58.546 38.462 4.77 0.00 0.00 2.29
3838 3882 6.462487 CGGCTACCCTTCTCTCATTTAATGTA 60.462 42.308 4.77 0.00 0.00 2.29
3839 3883 5.685075 CGGCTACCCTTCTCTCATTTAATGT 60.685 44.000 4.77 0.00 0.00 2.71
3840 3884 4.752101 CGGCTACCCTTCTCTCATTTAATG 59.248 45.833 0.00 0.00 0.00 1.90
3841 3885 4.743955 GCGGCTACCCTTCTCTCATTTAAT 60.744 45.833 0.00 0.00 0.00 1.40
3842 3886 3.431766 GCGGCTACCCTTCTCTCATTTAA 60.432 47.826 0.00 0.00 0.00 1.52
3843 3887 2.102588 GCGGCTACCCTTCTCTCATTTA 59.897 50.000 0.00 0.00 0.00 1.40
3844 3888 1.134371 GCGGCTACCCTTCTCTCATTT 60.134 52.381 0.00 0.00 0.00 2.32
3845 3889 0.466124 GCGGCTACCCTTCTCTCATT 59.534 55.000 0.00 0.00 0.00 2.57
3846 3890 1.739338 CGCGGCTACCCTTCTCTCAT 61.739 60.000 0.00 0.00 0.00 2.90
3847 3891 2.415608 CGCGGCTACCCTTCTCTCA 61.416 63.158 0.00 0.00 0.00 3.27
3848 3892 2.413765 CGCGGCTACCCTTCTCTC 59.586 66.667 0.00 0.00 0.00 3.20
3849 3893 2.563013 TACCGCGGCTACCCTTCTCT 62.563 60.000 28.58 2.85 0.00 3.10
3850 3894 1.669999 TTACCGCGGCTACCCTTCTC 61.670 60.000 28.58 0.00 0.00 2.87
3851 3895 1.673808 CTTACCGCGGCTACCCTTCT 61.674 60.000 28.58 4.37 0.00 2.85
3852 3896 1.227176 CTTACCGCGGCTACCCTTC 60.227 63.158 28.58 0.00 0.00 3.46
3853 3897 1.673808 CTCTTACCGCGGCTACCCTT 61.674 60.000 28.58 6.16 0.00 3.95
3854 3898 2.043652 TCTTACCGCGGCTACCCT 60.044 61.111 28.58 7.06 0.00 4.34
3855 3899 1.953231 AACTCTTACCGCGGCTACCC 61.953 60.000 28.58 0.00 0.00 3.69
3856 3900 0.804933 CAACTCTTACCGCGGCTACC 60.805 60.000 28.58 0.00 0.00 3.18
3857 3901 0.171903 TCAACTCTTACCGCGGCTAC 59.828 55.000 28.58 0.00 0.00 3.58
3895 4261 8.497910 ACTCACTCAATGTATGGTCCTATATT 57.502 34.615 0.00 0.00 0.00 1.28
3981 4347 5.539582 TGTACATGCGTCTAAAATGGAAC 57.460 39.130 0.00 0.00 0.00 3.62
4017 4383 0.672711 GGGGTTTGCTGTCTACCGAC 60.673 60.000 0.00 0.00 40.64 4.79
4026 4392 5.417580 TGCTTATAAAAGTAGGGGTTTGCTG 59.582 40.000 0.00 0.00 34.99 4.41
4071 4437 6.533730 AGCACATGCAATTAAGCTATACCTA 58.466 36.000 6.64 0.00 45.16 3.08
4166 4532 0.811281 GGCCGAGTTGCTTTGCTATT 59.189 50.000 0.00 0.00 0.00 1.73
4324 4690 8.082242 TCAACAGTGATGTTATATGTCCTATCG 58.918 37.037 0.00 0.00 0.00 2.92
4339 4705 3.636300 TGACCCCTTTTTCAACAGTGATG 59.364 43.478 0.00 0.00 32.48 3.07
4466 4876 5.903764 TGCCAAGAAAAATCAAAATGACG 57.096 34.783 0.00 0.00 0.00 4.35
4495 4906 5.720371 ATAGGTACAAAATTGCAAGCACA 57.280 34.783 4.94 0.00 0.00 4.57
4498 4909 9.150348 ACAATTTATAGGTACAAAATTGCAAGC 57.850 29.630 21.93 0.00 46.87 4.01
4537 4955 6.198639 AGGGACAGAATATGACAGTAGAACT 58.801 40.000 0.00 0.00 0.00 3.01
4538 4956 6.472686 AGGGACAGAATATGACAGTAGAAC 57.527 41.667 0.00 0.00 0.00 3.01
4539 4957 6.440647 ACAAGGGACAGAATATGACAGTAGAA 59.559 38.462 0.00 0.00 0.00 2.10
4540 4958 5.958380 ACAAGGGACAGAATATGACAGTAGA 59.042 40.000 0.00 0.00 0.00 2.59
4541 4959 6.045318 CACAAGGGACAGAATATGACAGTAG 58.955 44.000 0.00 0.00 0.00 2.57
4542 4960 5.483937 ACACAAGGGACAGAATATGACAGTA 59.516 40.000 0.00 0.00 0.00 2.74
4559 4977 4.154195 GGACACTGCATAAACTACACAAGG 59.846 45.833 0.00 0.00 0.00 3.61
4575 4993 5.589855 TGCTCATTGGTATATTTGGACACTG 59.410 40.000 0.00 0.00 0.00 3.66
4633 5051 7.518161 TGTCATCAGTGAAACGATGTTATTTC 58.482 34.615 0.00 0.00 45.86 2.17
4767 5187 8.982091 AAGAGTACTAGAGCAATATCAGTACA 57.018 34.615 11.51 0.00 42.50 2.90
4980 5406 8.302438 TCTACCTCTCTCCTTTAGTTTAAAACG 58.698 37.037 0.00 0.00 36.23 3.60
4986 5412 7.620094 TGCTTATCTACCTCTCTCCTTTAGTTT 59.380 37.037 0.00 0.00 0.00 2.66
4994 5420 4.586841 ACACATGCTTATCTACCTCTCTCC 59.413 45.833 0.00 0.00 0.00 3.71
5270 5704 4.202567 ACCCAAATCTGGAACTTTGCTAGA 60.203 41.667 0.00 0.00 46.92 2.43
5272 5706 4.079253 GACCCAAATCTGGAACTTTGCTA 58.921 43.478 0.00 0.00 46.92 3.49
5294 5728 5.089970 TCATCAACACTAGAATCAGGTGG 57.910 43.478 0.00 0.00 35.53 4.61
6108 6556 0.375454 TTGACGACAACGCAAACTGG 59.625 50.000 0.00 0.00 43.96 4.00
6118 6566 6.153851 TCCTCTAATCTATGGTTTGACGACAA 59.846 38.462 0.00 0.00 0.00 3.18
6232 6702 6.656693 AGAATTGCTACTACATTGTCAAGCTT 59.343 34.615 15.01 0.00 0.00 3.74
6393 6863 2.490115 GCAACCATGATTTACAACCGGA 59.510 45.455 9.46 0.00 0.00 5.14
6458 6928 0.247736 CCTGGAAGAGTGGAACCTCG 59.752 60.000 0.00 0.00 37.80 4.63
6513 6986 8.690884 TGGAAGAGAAAATTCACAAATAACACA 58.309 29.630 0.00 0.00 0.00 3.72
6540 7013 7.839680 AACACAAGATTAGAAAAATCCCACT 57.160 32.000 0.00 0.00 0.00 4.00
6634 7190 4.260170 CCACCTGGAAGAGAGAAATTCAG 58.740 47.826 0.00 0.00 37.39 3.02
6665 7221 8.850156 ACAAGATTGTTAATCACTAAAGCAAGT 58.150 29.630 4.56 0.00 38.47 3.16
6692 7248 9.817809 ATAACTCGAAAGCTTGATGTCTTAATA 57.182 29.630 0.00 0.00 0.00 0.98
6693 7249 8.607459 CATAACTCGAAAGCTTGATGTCTTAAT 58.393 33.333 0.00 0.00 0.00 1.40
6695 7251 7.063426 CACATAACTCGAAAGCTTGATGTCTTA 59.937 37.037 0.00 0.00 0.00 2.10
6711 7310 2.233922 ACTTCACCTCCCACATAACTCG 59.766 50.000 0.00 0.00 0.00 4.18
6715 7314 1.702401 TGCACTTCACCTCCCACATAA 59.298 47.619 0.00 0.00 0.00 1.90
6762 7361 3.746751 GCTTCCTGCCTGATGTGTATGAT 60.747 47.826 0.00 0.00 35.15 2.45
6763 7362 2.420547 GCTTCCTGCCTGATGTGTATGA 60.421 50.000 0.00 0.00 35.15 2.15
6764 7363 1.945394 GCTTCCTGCCTGATGTGTATG 59.055 52.381 0.00 0.00 35.15 2.39
6765 7364 1.561076 TGCTTCCTGCCTGATGTGTAT 59.439 47.619 0.00 0.00 42.00 2.29
6833 7432 4.517285 CTTGTAGCTGGAGCCTATCAAAA 58.483 43.478 0.00 0.00 43.38 2.44
6834 7433 3.682718 GCTTGTAGCTGGAGCCTATCAAA 60.683 47.826 0.00 0.00 43.38 2.69
6835 7434 2.158900 GCTTGTAGCTGGAGCCTATCAA 60.159 50.000 0.00 0.00 43.38 2.57
6836 7435 1.414181 GCTTGTAGCTGGAGCCTATCA 59.586 52.381 0.00 0.00 43.38 2.15
6850 7449 1.795768 CTGAACCGCTGAAGCTTGTA 58.204 50.000 2.10 0.00 39.32 2.41
6916 7515 0.324285 ACTTCAAGCAGCTCCAGGAG 59.676 55.000 12.81 12.81 0.00 3.69
7084 7683 7.734942 ATTAACCTGATGGTGAATTTTGTTGT 58.265 30.769 0.00 0.00 43.30 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.