Multiple sequence alignment - TraesCS1B01G320900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G320900 chr1B 100.000 4324 0 0 1 4324 545071265 545075588 0.000000e+00 7986.0
1 TraesCS1B01G320900 chr1B 82.827 2504 258 88 1126 3535 545162304 545164729 0.000000e+00 2084.0
2 TraesCS1B01G320900 chr1D 90.076 3164 151 71 503 3610 405163744 405166800 0.000000e+00 3952.0
3 TraesCS1B01G320900 chr1D 85.708 2351 190 66 1126 3389 405281044 405283335 0.000000e+00 2346.0
4 TraesCS1B01G320900 chr1D 90.625 224 11 8 228 451 405163456 405163669 5.470000e-74 289.0
5 TraesCS1B01G320900 chr1D 89.109 101 11 0 84 184 201839823 201839923 4.540000e-25 126.0
6 TraesCS1B01G320900 chr1D 90.196 51 1 3 3386 3435 405283349 405283396 3.610000e-06 63.9
7 TraesCS1B01G320900 chr1D 90.909 44 3 1 46 88 54972902 54972859 1.680000e-04 58.4
8 TraesCS1B01G320900 chr1A 89.849 2591 123 52 1098 3610 500663328 500665856 0.000000e+00 3199.0
9 TraesCS1B01G320900 chr1A 83.735 2447 212 92 1126 3494 500818726 500821064 0.000000e+00 2143.0
10 TraesCS1B01G320900 chr1A 90.317 537 23 12 503 1033 500662578 500663091 0.000000e+00 676.0
11 TraesCS1B01G320900 chr1A 82.517 286 35 8 228 503 500662260 500662540 2.010000e-58 237.0
12 TraesCS1B01G320900 chr1A 100.000 32 0 0 3504 3535 500821095 500821126 4.670000e-05 60.2
13 TraesCS1B01G320900 chr3B 81.434 544 75 17 2973 3494 10488021 10487482 5.170000e-114 422.0
14 TraesCS1B01G320900 chr3B 95.556 45 2 0 3 47 174337490 174337534 6.000000e-09 73.1
15 TraesCS1B01G320900 chr3B 90.909 44 3 1 46 88 810713643 810713686 1.680000e-04 58.4
16 TraesCS1B01G320900 chr5A 77.605 643 90 27 1197 1812 400508881 400508266 1.490000e-89 340.0
17 TraesCS1B01G320900 chr5A 74.672 533 84 31 1197 1709 644924425 644924926 5.710000e-44 189.0
18 TraesCS1B01G320900 chr5A 95.050 101 5 0 84 184 369358162 369358062 4.480000e-35 159.0
19 TraesCS1B01G320900 chr7A 77.484 644 89 30 1197 1812 588281828 588282443 6.930000e-88 335.0
20 TraesCS1B01G320900 chr7A 82.784 273 28 9 1368 1639 27668752 27669006 4.350000e-55 226.0
21 TraesCS1B01G320900 chr7A 82.418 273 29 9 1368 1639 27644101 27644355 2.020000e-53 220.0
22 TraesCS1B01G320900 chr7A 80.063 316 43 14 1362 1675 84409024 84409321 2.620000e-52 217.0
23 TraesCS1B01G320900 chr7B 77.329 644 90 30 1197 1812 581398459 581399074 3.220000e-86 329.0
24 TraesCS1B01G320900 chr7B 92.453 53 4 0 177 229 192598621 192598569 4.640000e-10 76.8
25 TraesCS1B01G320900 chr7D 78.100 379 46 19 1347 1709 141466135 141465778 5.670000e-49 206.0
26 TraesCS1B01G320900 chr7D 95.556 45 2 0 183 227 630277766 630277722 6.000000e-09 73.1
27 TraesCS1B01G320900 chr7D 93.617 47 3 0 1 47 265231965 265232011 2.160000e-08 71.3
28 TraesCS1B01G320900 chr6D 80.144 277 31 11 1372 1640 175711021 175710761 7.380000e-43 185.0
29 TraesCS1B01G320900 chr6D 91.209 91 8 0 84 174 257598105 257598195 1.630000e-24 124.0
30 TraesCS1B01G320900 chr6D 77.852 149 20 9 39 184 150433427 150433289 3.580000e-11 80.5
31 TraesCS1B01G320900 chr6D 93.617 47 3 0 183 229 125324560 125324514 2.160000e-08 71.3
32 TraesCS1B01G320900 chr6D 95.455 44 2 0 183 226 434634369 434634326 2.160000e-08 71.3
33 TraesCS1B01G320900 chr6A 79.779 272 29 11 1368 1638 594316939 594316693 1.600000e-39 174.0
34 TraesCS1B01G320900 chr2B 95.098 102 5 0 84 185 633371268 633371167 1.240000e-35 161.0
35 TraesCS1B01G320900 chr2B 89.831 118 9 3 84 199 325359681 325359797 9.690000e-32 148.0
36 TraesCS1B01G320900 chr5B 95.050 101 5 0 84 184 164677730 164677630 4.480000e-35 159.0
37 TraesCS1B01G320900 chr5B 95.050 101 5 0 84 184 711279772 711279672 4.480000e-35 159.0
38 TraesCS1B01G320900 chr5B 95.455 44 2 0 183 226 281200078 281200121 2.160000e-08 71.3
39 TraesCS1B01G320900 chr5B 80.488 82 16 0 1040 1121 185183827 185183746 3.610000e-06 63.9
40 TraesCS1B01G320900 chr2A 95.050 101 5 0 84 184 217468957 217468857 4.480000e-35 159.0
41 TraesCS1B01G320900 chr2A 95.050 101 5 0 84 184 332238565 332238465 4.480000e-35 159.0
42 TraesCS1B01G320900 chr2A 93.617 47 3 0 1 47 288617360 288617314 2.160000e-08 71.3
43 TraesCS1B01G320900 chr4D 93.396 106 7 0 84 189 177892672 177892777 1.610000e-34 158.0
44 TraesCS1B01G320900 chr4D 89.216 102 10 1 83 184 192197178 192197278 4.540000e-25 126.0
45 TraesCS1B01G320900 chr4D 87.000 100 13 0 85 184 36201625 36201724 3.530000e-21 113.0
46 TraesCS1B01G320900 chr4D 86.139 101 14 0 84 184 287971657 287971557 4.570000e-20 110.0
47 TraesCS1B01G320900 chr6B 94.118 102 6 0 84 185 419780938 419780837 5.790000e-34 156.0
48 TraesCS1B01G320900 chr4B 77.907 172 30 5 4013 4176 627630417 627630246 2.750000e-17 100.0
49 TraesCS1B01G320900 chr2D 95.745 47 2 0 1 47 540499620 540499574 4.640000e-10 76.8
50 TraesCS1B01G320900 chr2D 95.455 44 2 0 183 226 320468155 320468112 2.160000e-08 71.3
51 TraesCS1B01G320900 chr2D 95.455 44 2 0 183 226 556902894 556902851 2.160000e-08 71.3
52 TraesCS1B01G320900 chr3D 95.556 45 2 0 183 227 43422938 43422982 6.000000e-09 73.1
53 TraesCS1B01G320900 chr5D 95.455 44 2 0 183 226 440979529 440979572 2.160000e-08 71.3
54 TraesCS1B01G320900 chr5D 91.489 47 4 0 1 47 275818599 275818553 1.000000e-06 65.8
55 TraesCS1B01G320900 chr4A 91.489 47 4 0 1 47 550457390 550457436 1.000000e-06 65.8
56 TraesCS1B01G320900 chr4A 91.111 45 3 1 46 89 377545194 377545238 4.670000e-05 60.2
57 TraesCS1B01G320900 chr3A 97.143 35 1 0 3844 3878 545908620 545908586 4.670000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G320900 chr1B 545071265 545075588 4323 False 7986.000000 7986 100.0000 1 4324 1 chr1B.!!$F1 4323
1 TraesCS1B01G320900 chr1B 545162304 545164729 2425 False 2084.000000 2084 82.8270 1126 3535 1 chr1B.!!$F2 2409
2 TraesCS1B01G320900 chr1D 405163456 405166800 3344 False 2120.500000 3952 90.3505 228 3610 2 chr1D.!!$F2 3382
3 TraesCS1B01G320900 chr1D 405281044 405283396 2352 False 1204.950000 2346 87.9520 1126 3435 2 chr1D.!!$F3 2309
4 TraesCS1B01G320900 chr1A 500662260 500665856 3596 False 1370.666667 3199 87.5610 228 3610 3 chr1A.!!$F1 3382
5 TraesCS1B01G320900 chr1A 500818726 500821126 2400 False 1101.600000 2143 91.8675 1126 3535 2 chr1A.!!$F2 2409
6 TraesCS1B01G320900 chr3B 10487482 10488021 539 True 422.000000 422 81.4340 2973 3494 1 chr3B.!!$R1 521
7 TraesCS1B01G320900 chr5A 400508266 400508881 615 True 340.000000 340 77.6050 1197 1812 1 chr5A.!!$R2 615
8 TraesCS1B01G320900 chr7A 588281828 588282443 615 False 335.000000 335 77.4840 1197 1812 1 chr7A.!!$F4 615
9 TraesCS1B01G320900 chr7B 581398459 581399074 615 False 329.000000 329 77.3290 1197 1812 1 chr7B.!!$F1 615

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
361 362 0.036671 GACACCGACAAACCCCCTAG 60.037 60.0 0.00 0.00 0.00 3.02 F
388 389 0.313672 TGCCAGTTTGCACGAATTCC 59.686 50.0 0.00 0.00 36.04 3.01 F
452 462 1.661463 AGACACCATGGTCCAGACAT 58.339 50.0 16.53 0.00 38.59 3.06 F
1514 1801 0.599204 TTCTCCTGAACGACGTTGCC 60.599 55.0 19.60 5.15 0.00 4.52 F
1877 2202 0.608640 ACGAAATCAGGAAGCCGTCT 59.391 50.0 0.00 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1455 1729 0.102481 AGGACGGGATTCGATCGTTG 59.898 55.0 15.94 2.57 42.43 4.10 R
1456 1730 0.102481 CAGGACGGGATTCGATCGTT 59.898 55.0 15.94 3.86 42.43 3.85 R
2171 2524 0.179059 TTGAACAGGCACGCTGAAGA 60.179 50.0 0.00 0.00 0.00 2.87 R
2506 2874 0.110486 TGCAAAGGGGGTGAGAGAAC 59.890 55.0 0.00 0.00 0.00 3.01 R
3551 4075 0.107410 AACCAAGACAACCGACAGCA 60.107 50.0 0.00 0.00 0.00 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.697507 AATCTGGAAACTTTCAATACTTCTGT 57.302 30.769 3.93 0.00 0.00 3.41
32 33 9.793259 AATCTGGAAACTTTCAATACTTCTGTA 57.207 29.630 3.93 0.00 0.00 2.74
33 34 9.793259 ATCTGGAAACTTTCAATACTTCTGTAA 57.207 29.630 3.93 0.00 31.80 2.41
34 35 9.052759 TCTGGAAACTTTCAATACTTCTGTAAC 57.947 33.333 3.93 0.00 31.80 2.50
35 36 8.974060 TGGAAACTTTCAATACTTCTGTAACT 57.026 30.769 3.93 0.00 31.80 2.24
36 37 9.403583 TGGAAACTTTCAATACTTCTGTAACTT 57.596 29.630 3.93 0.00 31.80 2.66
58 59 8.768501 ACTTTAAAAATTCTCCTTCTGTTCCT 57.231 30.769 0.00 0.00 0.00 3.36
59 60 9.862149 ACTTTAAAAATTCTCCTTCTGTTCCTA 57.138 29.630 0.00 0.00 0.00 2.94
68 69 9.981460 ATTCTCCTTCTGTTCCTAAATATTTGT 57.019 29.630 11.05 0.00 0.00 2.83
69 70 9.449719 TTCTCCTTCTGTTCCTAAATATTTGTC 57.550 33.333 11.05 0.00 0.00 3.18
70 71 8.826765 TCTCCTTCTGTTCCTAAATATTTGTCT 58.173 33.333 11.05 0.00 0.00 3.41
71 72 9.454859 CTCCTTCTGTTCCTAAATATTTGTCTT 57.545 33.333 11.05 0.00 0.00 3.01
72 73 9.807921 TCCTTCTGTTCCTAAATATTTGTCTTT 57.192 29.630 11.05 0.00 0.00 2.52
113 114 8.764524 AGTGAATCTACACTCTTAAATGTGTC 57.235 34.615 14.05 3.95 46.36 3.67
114 115 8.589338 AGTGAATCTACACTCTTAAATGTGTCT 58.411 33.333 14.05 4.18 46.36 3.41
115 116 9.856488 GTGAATCTACACTCTTAAATGTGTCTA 57.144 33.333 14.05 6.79 44.94 2.59
143 144 7.572523 ACATTCATATGTGGTAGTCCATTTG 57.427 36.000 1.90 0.00 46.20 2.32
144 145 7.345691 ACATTCATATGTGGTAGTCCATTTGA 58.654 34.615 1.90 0.00 46.20 2.69
145 146 7.833682 ACATTCATATGTGGTAGTCCATTTGAA 59.166 33.333 1.90 7.58 46.20 2.69
146 147 8.685427 CATTCATATGTGGTAGTCCATTTGAAA 58.315 33.333 1.90 0.00 46.20 2.69
147 148 8.821686 TTCATATGTGGTAGTCCATTTGAAAT 57.178 30.769 1.90 0.00 46.20 2.17
148 149 9.913310 TTCATATGTGGTAGTCCATTTGAAATA 57.087 29.630 1.90 0.00 46.20 1.40
154 155 9.967451 TGTGGTAGTCCATTTGAAATATCTAAA 57.033 29.630 0.00 0.00 46.20 1.85
188 189 9.950496 ATATTTAGAAACATAGGGAGTAGCATG 57.050 33.333 0.00 0.00 0.00 4.06
189 190 4.696479 AGAAACATAGGGAGTAGCATGG 57.304 45.455 0.00 0.00 0.00 3.66
190 191 4.298626 AGAAACATAGGGAGTAGCATGGA 58.701 43.478 0.00 0.00 0.00 3.41
191 192 4.721776 AGAAACATAGGGAGTAGCATGGAA 59.278 41.667 0.00 0.00 0.00 3.53
192 193 4.423625 AACATAGGGAGTAGCATGGAAC 57.576 45.455 0.00 0.00 0.00 3.62
251 252 1.867919 CTCTGGAGCGACTGACCGTT 61.868 60.000 0.00 0.00 0.00 4.44
335 336 3.952675 GGGCGCATACATGGCACG 61.953 66.667 10.83 0.00 0.00 5.34
341 342 0.461870 GCATACATGGCACGAGTCCA 60.462 55.000 0.00 0.00 38.09 4.02
348 349 2.430921 GCACGAGTCCAGACACCG 60.431 66.667 0.00 5.90 36.33 4.94
359 360 1.768888 AGACACCGACAAACCCCCT 60.769 57.895 0.00 0.00 0.00 4.79
360 361 0.472352 AGACACCGACAAACCCCCTA 60.472 55.000 0.00 0.00 0.00 3.53
361 362 0.036671 GACACCGACAAACCCCCTAG 60.037 60.000 0.00 0.00 0.00 3.02
362 363 0.472352 ACACCGACAAACCCCCTAGA 60.472 55.000 0.00 0.00 0.00 2.43
363 364 0.688487 CACCGACAAACCCCCTAGAA 59.312 55.000 0.00 0.00 0.00 2.10
388 389 0.313672 TGCCAGTTTGCACGAATTCC 59.686 50.000 0.00 0.00 36.04 3.01
446 456 5.615925 AAATAGTCTAGACACCATGGTCC 57.384 43.478 24.44 10.17 38.59 4.46
447 457 2.623418 AGTCTAGACACCATGGTCCA 57.377 50.000 24.44 0.00 38.59 4.02
448 458 2.461695 AGTCTAGACACCATGGTCCAG 58.538 52.381 24.44 6.80 38.59 3.86
449 459 2.043115 AGTCTAGACACCATGGTCCAGA 59.957 50.000 24.44 11.91 38.59 3.86
450 460 2.166664 GTCTAGACACCATGGTCCAGAC 59.833 54.545 16.53 19.18 44.85 3.51
451 461 2.179427 CTAGACACCATGGTCCAGACA 58.821 52.381 16.53 0.00 38.59 3.41
452 462 1.661463 AGACACCATGGTCCAGACAT 58.339 50.000 16.53 0.00 38.59 3.06
453 463 1.988107 AGACACCATGGTCCAGACATT 59.012 47.619 16.53 0.00 38.59 2.71
503 513 5.278957 GCCTTAGAGAGCAAATTTGGTTCAA 60.279 40.000 22.77 13.24 39.30 2.69
504 514 6.738453 GCCTTAGAGAGCAAATTTGGTTCAAA 60.738 38.462 22.77 13.80 39.30 2.69
505 515 6.642540 CCTTAGAGAGCAAATTTGGTTCAAAC 59.357 38.462 22.77 10.55 39.30 2.93
559 607 3.667430 CGAGACGCGTAGAGAGAGTTTTT 60.667 47.826 13.97 0.00 34.64 1.94
620 668 4.540735 CCGCCACCGATACCCACC 62.541 72.222 0.00 0.00 36.29 4.61
621 669 4.884257 CGCCACCGATACCCACCG 62.884 72.222 0.00 0.00 36.29 4.94
622 670 3.463585 GCCACCGATACCCACCGA 61.464 66.667 0.00 0.00 0.00 4.69
623 671 2.803817 GCCACCGATACCCACCGAT 61.804 63.158 0.00 0.00 0.00 4.18
649 705 3.842732 AAAAATTACTGCCGTGCTACC 57.157 42.857 0.00 0.00 0.00 3.18
787 843 3.464207 GGCCGGTCCGAAATAAAGA 57.536 52.632 14.39 0.00 0.00 2.52
876 947 2.524887 AACCCCAACCCGACGAGA 60.525 61.111 0.00 0.00 0.00 4.04
877 948 2.875804 AACCCCAACCCGACGAGAC 61.876 63.158 0.00 0.00 0.00 3.36
996 1067 4.090057 GAGCCGGAACAAGCGCAC 62.090 66.667 11.47 0.00 32.05 5.34
1068 1139 2.743928 GCCAACAGAGGTGAGCCG 60.744 66.667 0.00 0.00 40.50 5.52
1069 1140 2.743928 CCAACAGAGGTGAGCCGC 60.744 66.667 0.00 0.00 40.50 6.53
1243 1488 1.681666 CACCAGGGCAGTCTGATGT 59.318 57.895 3.32 0.00 36.93 3.06
1272 1517 4.690719 TTGCCCGATCCGTGCGTT 62.691 61.111 0.00 0.00 32.04 4.84
1454 1728 4.346129 GGTAAGAAAATCAATCAGCGCAG 58.654 43.478 11.47 0.00 0.00 5.18
1510 1797 2.740452 GTTCTTTCTCCTGAACGACGT 58.260 47.619 0.00 0.00 34.21 4.34
1511 1798 3.121544 GTTCTTTCTCCTGAACGACGTT 58.878 45.455 14.11 14.11 34.21 3.99
1512 1799 2.739292 TCTTTCTCCTGAACGACGTTG 58.261 47.619 19.60 4.41 31.02 4.10
1513 1800 1.192534 CTTTCTCCTGAACGACGTTGC 59.807 52.381 19.60 10.26 31.02 4.17
1514 1801 0.599204 TTCTCCTGAACGACGTTGCC 60.599 55.000 19.60 5.15 0.00 4.52
1612 1899 1.023513 CCCAGCTCTTGAAGAAGGCG 61.024 60.000 0.00 0.00 33.19 5.52
1664 1952 1.448069 GAGCTCCCTTTCCGATCCC 59.552 63.158 0.87 0.00 0.00 3.85
1669 1957 0.988145 TCCCTTTCCGATCCCTGCAT 60.988 55.000 0.00 0.00 0.00 3.96
1736 2058 0.675633 GCTGTGGTGGTTTGCAGAAT 59.324 50.000 0.00 0.00 0.00 2.40
1853 2178 2.264794 GCCAAGATCGTCACCGGT 59.735 61.111 0.00 0.00 33.95 5.28
1864 2189 0.668401 GTCACCGGTTCCGACGAAAT 60.668 55.000 2.97 0.00 0.00 2.17
1874 2199 1.421410 CCGACGAAATCAGGAAGCCG 61.421 60.000 0.00 0.00 0.00 5.52
1877 2202 0.608640 ACGAAATCAGGAAGCCGTCT 59.391 50.000 0.00 0.00 0.00 4.18
1931 2268 2.561956 CGTCCACACCCTCACGACT 61.562 63.158 0.00 0.00 34.06 4.18
1949 2286 1.354337 CTGTGCTCAACCATCGGTCG 61.354 60.000 0.00 0.00 33.12 4.79
1980 2317 2.398554 CCGCTCCATCCAACCAACG 61.399 63.158 0.00 0.00 0.00 4.10
2056 2407 1.817099 GTGAATGCAGGAGGCCTCG 60.817 63.158 26.36 14.76 43.89 4.63
2059 2410 0.681733 GAATGCAGGAGGCCTCGATA 59.318 55.000 26.36 12.86 43.89 2.92
2083 2434 1.079819 CATCGACAAGCTGGACGGT 60.080 57.895 12.97 2.61 0.00 4.83
2095 2446 2.022129 GGACGGTGACAACGAGCTG 61.022 63.158 21.82 0.00 34.93 4.24
2128 2479 5.158101 ACTACATCGACGACATCTACAAG 57.842 43.478 0.00 0.00 0.00 3.16
2134 2485 6.482641 ACATCGACGACATCTACAAGTACTAT 59.517 38.462 0.00 0.00 0.00 2.12
2159 2512 1.064314 AGGCACAGGTAACCACAAACA 60.064 47.619 0.00 0.00 37.17 2.83
2171 2524 2.443255 ACCACAAACATCCCTCTTCAGT 59.557 45.455 0.00 0.00 0.00 3.41
2172 2525 3.077359 CCACAAACATCCCTCTTCAGTC 58.923 50.000 0.00 0.00 0.00 3.51
2173 2526 3.244700 CCACAAACATCCCTCTTCAGTCT 60.245 47.826 0.00 0.00 0.00 3.24
2175 2528 4.453819 CACAAACATCCCTCTTCAGTCTTC 59.546 45.833 0.00 0.00 0.00 2.87
2176 2529 4.103153 ACAAACATCCCTCTTCAGTCTTCA 59.897 41.667 0.00 0.00 0.00 3.02
2177 2530 4.550076 AACATCCCTCTTCAGTCTTCAG 57.450 45.455 0.00 0.00 0.00 3.02
2178 2531 2.235898 ACATCCCTCTTCAGTCTTCAGC 59.764 50.000 0.00 0.00 0.00 4.26
2179 2532 0.891373 TCCCTCTTCAGTCTTCAGCG 59.109 55.000 0.00 0.00 0.00 5.18
2182 2535 1.066914 CTCTTCAGTCTTCAGCGTGC 58.933 55.000 0.00 0.00 0.00 5.34
2186 2539 1.301244 CAGTCTTCAGCGTGCCTGT 60.301 57.895 0.00 0.00 42.38 4.00
2200 2553 1.436195 GCCTGTTCAAGTGACACGCA 61.436 55.000 0.00 0.00 0.00 5.24
2467 2830 1.659622 CCATGCTCATCGCCTGCAAA 61.660 55.000 0.00 0.00 40.24 3.68
2543 2932 1.586422 CATCCATCGATCGCCTGTTT 58.414 50.000 11.09 0.00 0.00 2.83
2629 3052 3.131396 CTGTCTGCAGGTAAACGACTTT 58.869 45.455 15.13 0.00 39.01 2.66
2690 3113 7.513436 AGATCCTGTCAATGGAGAAGAATATCT 59.487 37.037 0.00 0.00 36.99 1.98
2826 3263 6.175471 TGAATATCTGAAGTTGCATGTCAGT 58.825 36.000 16.83 9.96 39.82 3.41
2827 3264 6.093082 TGAATATCTGAAGTTGCATGTCAGTG 59.907 38.462 16.83 0.00 39.82 3.66
2828 3265 1.875514 TCTGAAGTTGCATGTCAGTGC 59.124 47.619 16.83 0.00 45.25 4.40
2829 3266 0.953727 TGAAGTTGCATGTCAGTGCC 59.046 50.000 0.00 0.00 44.43 5.01
2832 3269 1.171308 AGTTGCATGTCAGTGCCATC 58.829 50.000 0.00 0.00 44.43 3.51
2854 3295 1.531058 GCCATGGAATTTGCGTCGTAC 60.531 52.381 18.40 0.00 0.00 3.67
2855 3296 1.267334 CCATGGAATTTGCGTCGTACG 60.267 52.381 5.56 9.53 45.88 3.67
2858 3299 0.094046 GGAATTTGCGTCGTACGTGG 59.906 55.000 16.05 9.43 44.73 4.94
3494 3992 3.055747 AGAGCTGGGTTTACTTACTCTGC 60.056 47.826 0.00 0.00 42.01 4.26
3569 4095 0.108585 ATGCTGTCGGTTGTCTTGGT 59.891 50.000 0.00 0.00 0.00 3.67
3588 4114 7.382759 GTCTTGGTTTCAGTTTGTGTTTGTTAA 59.617 33.333 0.00 0.00 0.00 2.01
3589 4115 8.091449 TCTTGGTTTCAGTTTGTGTTTGTTAAT 58.909 29.630 0.00 0.00 0.00 1.40
3590 4116 7.820044 TGGTTTCAGTTTGTGTTTGTTAATC 57.180 32.000 0.00 0.00 0.00 1.75
3591 4117 6.814146 TGGTTTCAGTTTGTGTTTGTTAATCC 59.186 34.615 0.00 0.00 0.00 3.01
3592 4118 6.814146 GGTTTCAGTTTGTGTTTGTTAATCCA 59.186 34.615 0.00 0.00 0.00 3.41
3593 4119 7.010091 GGTTTCAGTTTGTGTTTGTTAATCCAG 59.990 37.037 0.00 0.00 0.00 3.86
3610 4142 5.717038 ATCCAGTTTTTCTTTTGTTTGCG 57.283 34.783 0.00 0.00 0.00 4.85
3611 4143 3.929610 TCCAGTTTTTCTTTTGTTTGCGG 59.070 39.130 0.00 0.00 0.00 5.69
3612 4144 3.929610 CCAGTTTTTCTTTTGTTTGCGGA 59.070 39.130 0.00 0.00 0.00 5.54
3613 4145 4.032786 CCAGTTTTTCTTTTGTTTGCGGAG 59.967 41.667 0.00 0.00 0.00 4.63
3628 4160 2.995466 CGGAGCTTTTCATTGCTGAA 57.005 45.000 0.00 0.00 39.91 3.02
3629 4161 3.498927 CGGAGCTTTTCATTGCTGAAT 57.501 42.857 0.00 0.00 40.95 2.57
3630 4162 4.621068 CGGAGCTTTTCATTGCTGAATA 57.379 40.909 0.00 0.00 40.95 1.75
3631 4163 4.985413 CGGAGCTTTTCATTGCTGAATAA 58.015 39.130 0.00 0.00 40.95 1.40
3632 4164 5.032863 CGGAGCTTTTCATTGCTGAATAAG 58.967 41.667 0.00 0.00 40.95 1.73
3633 4165 5.392380 CGGAGCTTTTCATTGCTGAATAAGT 60.392 40.000 0.00 2.40 40.95 2.24
3634 4166 5.803967 GGAGCTTTTCATTGCTGAATAAGTG 59.196 40.000 0.00 0.00 40.95 3.16
3635 4167 5.166398 AGCTTTTCATTGCTGAATAAGTGC 58.834 37.500 0.00 0.00 40.95 4.40
3636 4168 4.925054 GCTTTTCATTGCTGAATAAGTGCA 59.075 37.500 0.00 0.00 40.95 4.57
3637 4169 5.061808 GCTTTTCATTGCTGAATAAGTGCAG 59.938 40.000 0.00 0.00 40.95 4.41
3647 4179 4.985413 TGAATAAGTGCAGCAACATTAGC 58.015 39.130 0.00 0.00 0.00 3.09
3648 4180 4.142403 TGAATAAGTGCAGCAACATTAGCC 60.142 41.667 0.00 0.00 0.00 3.93
3649 4181 1.619654 AAGTGCAGCAACATTAGCCA 58.380 45.000 0.00 0.00 0.00 4.75
3650 4182 1.171308 AGTGCAGCAACATTAGCCAG 58.829 50.000 0.00 0.00 0.00 4.85
3651 4183 1.167851 GTGCAGCAACATTAGCCAGA 58.832 50.000 0.00 0.00 0.00 3.86
3652 4184 1.541147 GTGCAGCAACATTAGCCAGAA 59.459 47.619 0.00 0.00 0.00 3.02
3653 4185 2.030007 GTGCAGCAACATTAGCCAGAAA 60.030 45.455 0.00 0.00 0.00 2.52
3654 4186 2.627221 TGCAGCAACATTAGCCAGAAAA 59.373 40.909 0.00 0.00 0.00 2.29
3655 4187 3.069300 TGCAGCAACATTAGCCAGAAAAA 59.931 39.130 0.00 0.00 0.00 1.94
3675 4207 6.509418 AAAAACGATTATAGGAGCAAGCAA 57.491 33.333 0.00 0.00 0.00 3.91
3676 4208 6.509418 AAAACGATTATAGGAGCAAGCAAA 57.491 33.333 0.00 0.00 0.00 3.68
3677 4209 6.509418 AAACGATTATAGGAGCAAGCAAAA 57.491 33.333 0.00 0.00 0.00 2.44
3678 4210 6.509418 AACGATTATAGGAGCAAGCAAAAA 57.491 33.333 0.00 0.00 0.00 1.94
3697 4229 2.814805 AATCCCCATCTCAACAGTGG 57.185 50.000 0.00 0.00 0.00 4.00
3698 4230 1.971149 ATCCCCATCTCAACAGTGGA 58.029 50.000 0.00 0.00 34.94 4.02
3699 4231 1.971149 TCCCCATCTCAACAGTGGAT 58.029 50.000 0.00 0.00 34.94 3.41
3700 4232 1.561076 TCCCCATCTCAACAGTGGATG 59.439 52.381 0.00 0.00 34.94 3.51
3701 4233 1.409241 CCCCATCTCAACAGTGGATGG 60.409 57.143 15.55 15.55 44.32 3.51
3702 4234 1.386533 CCATCTCAACAGTGGATGGC 58.613 55.000 11.69 0.00 41.56 4.40
3703 4235 1.340308 CCATCTCAACAGTGGATGGCA 60.340 52.381 11.69 0.00 41.56 4.92
3704 4236 2.439409 CATCTCAACAGTGGATGGCAA 58.561 47.619 0.00 0.00 32.81 4.52
3705 4237 2.655090 TCTCAACAGTGGATGGCAAA 57.345 45.000 0.00 0.00 0.00 3.68
3706 4238 2.942804 TCTCAACAGTGGATGGCAAAA 58.057 42.857 0.00 0.00 0.00 2.44
3707 4239 3.295093 TCTCAACAGTGGATGGCAAAAA 58.705 40.909 0.00 0.00 0.00 1.94
3729 4261 8.421249 AAAAACATATCTCAAATGTTCCAGGA 57.579 30.769 2.24 0.00 44.66 3.86
3730 4262 8.421249 AAAACATATCTCAAATGTTCCAGGAA 57.579 30.769 0.00 0.00 44.66 3.36
3731 4263 8.421249 AAACATATCTCAAATGTTCCAGGAAA 57.579 30.769 2.45 0.00 44.66 3.13
3732 4264 8.421249 AACATATCTCAAATGTTCCAGGAAAA 57.579 30.769 2.45 0.00 42.45 2.29
3733 4265 8.421249 ACATATCTCAAATGTTCCAGGAAAAA 57.579 30.769 2.45 0.00 33.83 1.94
3734 4266 9.039165 ACATATCTCAAATGTTCCAGGAAAAAT 57.961 29.630 2.45 0.00 33.83 1.82
3735 4267 9.880157 CATATCTCAAATGTTCCAGGAAAAATT 57.120 29.630 2.45 4.54 0.00 1.82
3736 4268 9.880157 ATATCTCAAATGTTCCAGGAAAAATTG 57.120 29.630 12.62 12.62 0.00 2.32
3737 4269 7.358770 TCTCAAATGTTCCAGGAAAAATTGA 57.641 32.000 18.48 18.48 0.00 2.57
3738 4270 7.436118 TCTCAAATGTTCCAGGAAAAATTGAG 58.564 34.615 30.20 30.20 37.57 3.02
3739 4271 7.069826 TCTCAAATGTTCCAGGAAAAATTGAGT 59.930 33.333 32.34 10.88 37.53 3.41
3740 4272 7.563906 TCAAATGTTCCAGGAAAAATTGAGTT 58.436 30.769 16.38 0.00 0.00 3.01
3741 4273 7.710475 TCAAATGTTCCAGGAAAAATTGAGTTC 59.290 33.333 16.38 0.00 0.00 3.01
3742 4274 6.729690 ATGTTCCAGGAAAAATTGAGTTCA 57.270 33.333 2.45 0.00 0.00 3.18
3743 4275 6.729690 TGTTCCAGGAAAAATTGAGTTCAT 57.270 33.333 2.45 0.00 0.00 2.57
3744 4276 6.748132 TGTTCCAGGAAAAATTGAGTTCATC 58.252 36.000 2.45 0.00 0.00 2.92
3745 4277 5.982890 TCCAGGAAAAATTGAGTTCATCC 57.017 39.130 0.00 0.00 0.00 3.51
3746 4278 5.392995 TCCAGGAAAAATTGAGTTCATCCA 58.607 37.500 0.00 0.00 30.63 3.41
3747 4279 5.837979 TCCAGGAAAAATTGAGTTCATCCAA 59.162 36.000 0.00 0.00 30.63 3.53
3748 4280 6.326064 TCCAGGAAAAATTGAGTTCATCCAAA 59.674 34.615 0.00 0.00 30.63 3.28
3749 4281 6.991531 CCAGGAAAAATTGAGTTCATCCAAAA 59.008 34.615 0.00 0.00 30.63 2.44
3750 4282 7.498570 CCAGGAAAAATTGAGTTCATCCAAAAA 59.501 33.333 0.00 0.00 30.63 1.94
3840 4372 9.639563 AAATTTGGAACATTTTATGGGAAAACT 57.360 25.926 0.00 0.00 39.30 2.66
3841 4373 9.639563 AATTTGGAACATTTTATGGGAAAACTT 57.360 25.926 0.00 0.00 39.30 2.66
3844 4376 9.936759 TTGGAACATTTTATGGGAAAACTTATC 57.063 29.630 0.00 0.00 39.30 1.75
3845 4377 9.094578 TGGAACATTTTATGGGAAAACTTATCA 57.905 29.630 0.00 0.00 33.60 2.15
3846 4378 9.936759 GGAACATTTTATGGGAAAACTTATCAA 57.063 29.630 0.00 0.00 33.60 2.57
3921 4453 5.612725 TTTTCCCTGAAGTGCAAAATTCT 57.387 34.783 8.51 0.00 0.00 2.40
3922 4454 6.723298 TTTTCCCTGAAGTGCAAAATTCTA 57.277 33.333 8.51 0.00 0.00 2.10
3923 4455 6.723298 TTTCCCTGAAGTGCAAAATTCTAA 57.277 33.333 8.51 0.00 0.00 2.10
3924 4456 6.723298 TTCCCTGAAGTGCAAAATTCTAAA 57.277 33.333 8.51 0.00 0.00 1.85
3925 4457 6.723298 TCCCTGAAGTGCAAAATTCTAAAA 57.277 33.333 8.51 0.00 0.00 1.52
3926 4458 7.118496 TCCCTGAAGTGCAAAATTCTAAAAA 57.882 32.000 8.51 0.00 0.00 1.94
3952 4484 9.772973 AACTTTTGAACTATTTTGGTATTTCCC 57.227 29.630 0.00 0.00 34.77 3.97
3953 4485 9.154632 ACTTTTGAACTATTTTGGTATTTCCCT 57.845 29.630 0.00 0.00 34.77 4.20
3954 4486 9.996554 CTTTTGAACTATTTTGGTATTTCCCTT 57.003 29.630 0.00 0.00 34.77 3.95
3955 4487 9.771534 TTTTGAACTATTTTGGTATTTCCCTTG 57.228 29.630 0.00 0.00 34.77 3.61
3956 4488 7.475137 TGAACTATTTTGGTATTTCCCTTGG 57.525 36.000 0.00 0.00 34.77 3.61
3957 4489 5.932619 ACTATTTTGGTATTTCCCTTGGC 57.067 39.130 0.00 0.00 34.77 4.52
3958 4490 5.337788 ACTATTTTGGTATTTCCCTTGGCA 58.662 37.500 0.00 0.00 34.77 4.92
3959 4491 4.824479 ATTTTGGTATTTCCCTTGGCAG 57.176 40.909 0.00 0.00 34.77 4.85
3960 4492 1.555967 TTGGTATTTCCCTTGGCAGC 58.444 50.000 0.00 0.00 34.77 5.25
3961 4493 0.679640 TGGTATTTCCCTTGGCAGCG 60.680 55.000 0.00 0.00 34.77 5.18
3962 4494 1.433471 GTATTTCCCTTGGCAGCGC 59.567 57.895 0.00 0.00 0.00 5.92
3963 4495 1.001517 TATTTCCCTTGGCAGCGCA 60.002 52.632 11.47 0.00 0.00 6.09
3964 4496 1.312371 TATTTCCCTTGGCAGCGCAC 61.312 55.000 11.47 0.00 0.00 5.34
3970 4502 4.617520 TTGGCAGCGCACGAGGAA 62.618 61.111 11.47 0.00 0.00 3.36
3973 4505 4.742201 GCAGCGCACGAGGAAGGA 62.742 66.667 11.47 0.00 0.00 3.36
3974 4506 2.048222 CAGCGCACGAGGAAGGAA 60.048 61.111 11.47 0.00 0.00 3.36
3975 4507 2.097038 CAGCGCACGAGGAAGGAAG 61.097 63.158 11.47 0.00 0.00 3.46
3976 4508 3.491652 GCGCACGAGGAAGGAAGC 61.492 66.667 0.30 0.00 0.00 3.86
3977 4509 2.262915 CGCACGAGGAAGGAAGCT 59.737 61.111 0.00 0.00 0.00 3.74
3978 4510 1.511305 CGCACGAGGAAGGAAGCTA 59.489 57.895 0.00 0.00 0.00 3.32
3979 4511 0.526524 CGCACGAGGAAGGAAGCTAG 60.527 60.000 0.00 0.00 0.00 3.42
3980 4512 0.179097 GCACGAGGAAGGAAGCTAGG 60.179 60.000 0.00 0.00 0.00 3.02
3981 4513 0.179097 CACGAGGAAGGAAGCTAGGC 60.179 60.000 0.00 0.00 0.00 3.93
3982 4514 0.614979 ACGAGGAAGGAAGCTAGGCA 60.615 55.000 0.00 0.00 0.00 4.75
3983 4515 0.179097 CGAGGAAGGAAGCTAGGCAC 60.179 60.000 0.00 0.00 0.00 5.01
3984 4516 0.905357 GAGGAAGGAAGCTAGGCACA 59.095 55.000 0.00 0.00 0.00 4.57
3985 4517 0.615850 AGGAAGGAAGCTAGGCACAC 59.384 55.000 0.00 0.00 0.00 3.82
3986 4518 0.324943 GGAAGGAAGCTAGGCACACA 59.675 55.000 0.00 0.00 0.00 3.72
3987 4519 1.065126 GGAAGGAAGCTAGGCACACAT 60.065 52.381 0.00 0.00 0.00 3.21
3988 4520 2.284190 GAAGGAAGCTAGGCACACATC 58.716 52.381 0.00 0.00 0.00 3.06
3989 4521 1.577736 AGGAAGCTAGGCACACATCT 58.422 50.000 0.00 0.00 0.00 2.90
3990 4522 1.484240 AGGAAGCTAGGCACACATCTC 59.516 52.381 0.00 0.00 0.00 2.75
3991 4523 1.208052 GGAAGCTAGGCACACATCTCA 59.792 52.381 0.00 0.00 0.00 3.27
3992 4524 2.355108 GGAAGCTAGGCACACATCTCAA 60.355 50.000 0.00 0.00 0.00 3.02
3993 4525 3.338249 GAAGCTAGGCACACATCTCAAA 58.662 45.455 0.00 0.00 0.00 2.69
3994 4526 3.641434 AGCTAGGCACACATCTCAAAT 57.359 42.857 0.00 0.00 0.00 2.32
3995 4527 3.960571 AGCTAGGCACACATCTCAAATT 58.039 40.909 0.00 0.00 0.00 1.82
3996 4528 3.944015 AGCTAGGCACACATCTCAAATTC 59.056 43.478 0.00 0.00 0.00 2.17
3997 4529 3.944015 GCTAGGCACACATCTCAAATTCT 59.056 43.478 0.00 0.00 0.00 2.40
3998 4530 4.397417 GCTAGGCACACATCTCAAATTCTT 59.603 41.667 0.00 0.00 0.00 2.52
3999 4531 5.105997 GCTAGGCACACATCTCAAATTCTTT 60.106 40.000 0.00 0.00 0.00 2.52
4000 4532 5.796424 AGGCACACATCTCAAATTCTTTT 57.204 34.783 0.00 0.00 0.00 2.27
4001 4533 6.899393 AGGCACACATCTCAAATTCTTTTA 57.101 33.333 0.00 0.00 0.00 1.52
4002 4534 6.681777 AGGCACACATCTCAAATTCTTTTAC 58.318 36.000 0.00 0.00 0.00 2.01
4003 4535 5.863935 GGCACACATCTCAAATTCTTTTACC 59.136 40.000 0.00 0.00 0.00 2.85
4004 4536 5.569059 GCACACATCTCAAATTCTTTTACCG 59.431 40.000 0.00 0.00 0.00 4.02
4005 4537 6.086222 CACACATCTCAAATTCTTTTACCGG 58.914 40.000 0.00 0.00 0.00 5.28
4006 4538 5.095490 CACATCTCAAATTCTTTTACCGGC 58.905 41.667 0.00 0.00 0.00 6.13
4007 4539 4.764823 ACATCTCAAATTCTTTTACCGGCA 59.235 37.500 0.00 0.00 0.00 5.69
4008 4540 5.242838 ACATCTCAAATTCTTTTACCGGCAA 59.757 36.000 0.00 0.00 0.00 4.52
4009 4541 5.776173 TCTCAAATTCTTTTACCGGCAAA 57.224 34.783 0.00 0.00 0.00 3.68
4010 4542 6.339587 TCTCAAATTCTTTTACCGGCAAAT 57.660 33.333 0.00 0.00 0.00 2.32
4011 4543 7.455641 TCTCAAATTCTTTTACCGGCAAATA 57.544 32.000 0.00 0.00 0.00 1.40
4012 4544 8.062065 TCTCAAATTCTTTTACCGGCAAATAT 57.938 30.769 0.00 0.00 0.00 1.28
4013 4545 9.179909 TCTCAAATTCTTTTACCGGCAAATATA 57.820 29.630 0.00 0.00 0.00 0.86
4014 4546 9.965824 CTCAAATTCTTTTACCGGCAAATATAT 57.034 29.630 0.00 0.00 0.00 0.86
4020 4552 7.863666 TCTTTTACCGGCAAATATATAAACCG 58.136 34.615 0.00 11.39 40.30 4.44
4021 4553 7.714377 TCTTTTACCGGCAAATATATAAACCGA 59.286 33.333 17.30 1.40 43.19 4.69
4022 4554 7.798596 TTTACCGGCAAATATATAAACCGAA 57.201 32.000 17.30 6.20 43.19 4.30
4023 4555 7.982761 TTACCGGCAAATATATAAACCGAAT 57.017 32.000 17.30 10.12 43.19 3.34
4024 4556 9.499479 TTTACCGGCAAATATATAAACCGAATA 57.501 29.630 17.30 9.42 43.19 1.75
4025 4557 7.368480 ACCGGCAAATATATAAACCGAATAC 57.632 36.000 17.30 0.00 43.19 1.89
4026 4558 6.372381 ACCGGCAAATATATAAACCGAATACC 59.628 38.462 17.30 0.00 43.19 2.73
4027 4559 6.372103 CCGGCAAATATATAAACCGAATACCA 59.628 38.462 17.30 0.00 43.19 3.25
4028 4560 7.094720 CCGGCAAATATATAAACCGAATACCAA 60.095 37.037 17.30 0.00 43.19 3.67
4029 4561 8.291032 CGGCAAATATATAAACCGAATACCAAA 58.709 33.333 12.52 0.00 43.19 3.28
4030 4562 9.401873 GGCAAATATATAAACCGAATACCAAAC 57.598 33.333 0.00 0.00 0.00 2.93
4031 4563 9.401873 GCAAATATATAAACCGAATACCAAACC 57.598 33.333 0.00 0.00 0.00 3.27
4032 4564 9.601971 CAAATATATAAACCGAATACCAAACCG 57.398 33.333 0.00 0.00 0.00 4.44
4033 4565 9.558396 AAATATATAAACCGAATACCAAACCGA 57.442 29.630 0.00 0.00 0.00 4.69
4034 4566 9.558396 AATATATAAACCGAATACCAAACCGAA 57.442 29.630 0.00 0.00 0.00 4.30
4035 4567 7.862512 ATATAAACCGAATACCAAACCGAAA 57.137 32.000 0.00 0.00 0.00 3.46
4036 4568 3.902261 AACCGAATACCAAACCGAAAC 57.098 42.857 0.00 0.00 0.00 2.78
4037 4569 3.130280 ACCGAATACCAAACCGAAACT 57.870 42.857 0.00 0.00 0.00 2.66
4038 4570 3.069289 ACCGAATACCAAACCGAAACTC 58.931 45.455 0.00 0.00 0.00 3.01
4039 4571 2.093152 CCGAATACCAAACCGAAACTCG 59.907 50.000 0.00 0.00 40.07 4.18
4054 4586 6.815672 CGAAACTCGGTTAACCAAATTTTT 57.184 33.333 24.14 14.16 36.00 1.94
4055 4587 6.632765 CGAAACTCGGTTAACCAAATTTTTG 58.367 36.000 24.14 15.80 36.00 2.44
4113 4645 8.964150 CCAACCTTGTTAGAATTTTAAAAGACG 58.036 33.333 6.79 0.00 0.00 4.18
4114 4646 9.724839 CAACCTTGTTAGAATTTTAAAAGACGA 57.275 29.630 6.79 0.00 0.00 4.20
4127 4659 9.893305 ATTTTAAAAGACGAATGGTAGAAACTG 57.107 29.630 6.79 0.00 0.00 3.16
4128 4660 8.665643 TTTAAAAGACGAATGGTAGAAACTGA 57.334 30.769 0.00 0.00 0.00 3.41
4129 4661 8.665643 TTAAAAGACGAATGGTAGAAACTGAA 57.334 30.769 0.00 0.00 0.00 3.02
4130 4662 7.745620 AAAAGACGAATGGTAGAAACTGAAT 57.254 32.000 0.00 0.00 0.00 2.57
4131 4663 8.842358 AAAAGACGAATGGTAGAAACTGAATA 57.158 30.769 0.00 0.00 0.00 1.75
4132 4664 9.449719 AAAAGACGAATGGTAGAAACTGAATAT 57.550 29.630 0.00 0.00 0.00 1.28
4133 4665 9.449719 AAAGACGAATGGTAGAAACTGAATATT 57.550 29.630 0.00 0.00 0.00 1.28
4134 4666 9.449719 AAGACGAATGGTAGAAACTGAATATTT 57.550 29.630 0.00 0.00 0.00 1.40
4135 4667 9.449719 AGACGAATGGTAGAAACTGAATATTTT 57.550 29.630 0.00 0.00 0.00 1.82
4157 4689 2.420628 TTATACCGAATACCCACGCG 57.579 50.000 3.53 3.53 0.00 6.01
4158 4690 1.317613 TATACCGAATACCCACGCGT 58.682 50.000 5.58 5.58 0.00 6.01
4159 4691 1.317613 ATACCGAATACCCACGCGTA 58.682 50.000 13.44 0.00 0.00 4.42
4160 4692 0.662619 TACCGAATACCCACGCGTAG 59.337 55.000 13.44 9.51 0.00 3.51
4161 4693 1.315257 ACCGAATACCCACGCGTAGT 61.315 55.000 13.44 15.70 0.00 2.73
4169 4701 2.728015 CACGCGTAGTGCACACGA 60.728 61.111 31.74 12.69 46.97 4.35
4170 4702 2.428569 ACGCGTAGTGCACACGAG 60.429 61.111 31.74 30.21 46.97 4.18
4171 4703 2.127003 CGCGTAGTGCACACGAGA 60.127 61.111 31.74 8.27 46.97 4.04
4172 4704 1.514228 CGCGTAGTGCACACGAGAT 60.514 57.895 31.74 11.63 46.97 2.75
4173 4705 1.733416 CGCGTAGTGCACACGAGATG 61.733 60.000 31.74 19.42 46.97 2.90
4174 4706 0.732880 GCGTAGTGCACACGAGATGT 60.733 55.000 31.74 10.34 44.81 3.06
4175 4707 1.698165 CGTAGTGCACACGAGATGTT 58.302 50.000 26.88 5.50 40.64 2.71
4176 4708 2.858839 CGTAGTGCACACGAGATGTTA 58.141 47.619 26.88 4.59 40.64 2.41
4177 4709 3.239254 CGTAGTGCACACGAGATGTTAA 58.761 45.455 26.88 0.00 40.64 2.01
4178 4710 3.059044 CGTAGTGCACACGAGATGTTAAC 59.941 47.826 26.88 0.00 40.64 2.01
4179 4711 2.058798 AGTGCACACGAGATGTTAACG 58.941 47.619 21.04 0.00 40.64 3.18
4180 4712 2.055838 GTGCACACGAGATGTTAACGA 58.944 47.619 13.17 0.00 40.64 3.85
4181 4713 2.055838 TGCACACGAGATGTTAACGAC 58.944 47.619 0.26 0.00 40.64 4.34
4182 4714 2.055838 GCACACGAGATGTTAACGACA 58.944 47.619 0.26 0.00 40.64 4.35
4183 4715 2.473609 GCACACGAGATGTTAACGACAA 59.526 45.455 0.26 0.00 40.64 3.18
4184 4716 3.660904 GCACACGAGATGTTAACGACAAC 60.661 47.826 0.26 0.00 40.64 3.32
4185 4717 3.734231 CACACGAGATGTTAACGACAACT 59.266 43.478 0.26 0.00 43.26 3.16
4191 4723 4.307432 AGATGTTAACGACAACTCTGTGG 58.693 43.478 0.26 0.00 42.62 4.17
4192 4724 3.804786 TGTTAACGACAACTCTGTGGA 57.195 42.857 0.26 0.00 35.30 4.02
4193 4725 4.330944 TGTTAACGACAACTCTGTGGAT 57.669 40.909 0.26 0.00 35.30 3.41
4194 4726 5.456548 TGTTAACGACAACTCTGTGGATA 57.543 39.130 0.26 0.00 35.30 2.59
4195 4727 5.224888 TGTTAACGACAACTCTGTGGATAC 58.775 41.667 0.26 0.00 35.30 2.24
4196 4728 5.010314 TGTTAACGACAACTCTGTGGATACT 59.990 40.000 0.26 0.00 35.30 2.12
4197 4729 3.851976 ACGACAACTCTGTGGATACTC 57.148 47.619 0.00 0.00 35.30 2.59
4198 4730 3.154710 ACGACAACTCTGTGGATACTCA 58.845 45.455 0.00 0.00 35.30 3.41
4199 4731 3.764434 ACGACAACTCTGTGGATACTCAT 59.236 43.478 0.00 0.00 39.74 2.90
4200 4732 4.108336 CGACAACTCTGTGGATACTCATG 58.892 47.826 0.00 0.00 39.74 3.07
4201 4733 3.866651 ACAACTCTGTGGATACTCATGC 58.133 45.455 0.00 0.00 39.74 4.06
4202 4734 3.261643 ACAACTCTGTGGATACTCATGCA 59.738 43.478 0.00 0.00 39.74 3.96
4206 4738 2.992089 GTGGATACTCATGCACCCG 58.008 57.895 0.00 0.00 45.12 5.28
4207 4739 1.146041 TGGATACTCATGCACCCGC 59.854 57.895 0.00 0.00 36.39 6.13
4208 4740 1.598130 GGATACTCATGCACCCGCC 60.598 63.158 0.00 0.00 37.32 6.13
4209 4741 1.598130 GATACTCATGCACCCGCCC 60.598 63.158 0.00 0.00 37.32 6.13
4210 4742 3.120086 ATACTCATGCACCCGCCCC 62.120 63.158 0.00 0.00 37.32 5.80
4228 4760 3.434319 GTGCACGTGGGCCTCATG 61.434 66.667 18.88 7.32 38.32 3.07
4229 4761 3.952508 TGCACGTGGGCCTCATGT 61.953 61.111 18.88 11.92 45.80 3.21
4232 4764 2.665000 ACGTGGGCCTCATGTGAG 59.335 61.111 15.71 3.01 43.44 3.51
4242 4774 2.687700 CTCATGTGAGGAGTCTTGGG 57.312 55.000 2.03 0.00 38.48 4.12
4243 4775 1.209019 CTCATGTGAGGAGTCTTGGGG 59.791 57.143 2.03 0.00 38.48 4.96
4244 4776 1.203300 TCATGTGAGGAGTCTTGGGGA 60.203 52.381 0.00 0.00 0.00 4.81
4245 4777 1.630369 CATGTGAGGAGTCTTGGGGAA 59.370 52.381 0.00 0.00 0.00 3.97
4246 4778 1.814429 TGTGAGGAGTCTTGGGGAAA 58.186 50.000 0.00 0.00 0.00 3.13
4247 4779 2.348472 TGTGAGGAGTCTTGGGGAAAT 58.652 47.619 0.00 0.00 0.00 2.17
4248 4780 3.526899 TGTGAGGAGTCTTGGGGAAATA 58.473 45.455 0.00 0.00 0.00 1.40
4249 4781 4.111577 TGTGAGGAGTCTTGGGGAAATAT 58.888 43.478 0.00 0.00 0.00 1.28
4250 4782 4.164221 TGTGAGGAGTCTTGGGGAAATATC 59.836 45.833 0.00 0.00 0.00 1.63
4251 4783 3.716872 TGAGGAGTCTTGGGGAAATATCC 59.283 47.826 0.00 0.00 45.77 2.59
4263 4795 4.004196 GGAAATATCCCTTGTACCCTCG 57.996 50.000 0.00 0.00 40.10 4.63
4264 4796 3.390311 GGAAATATCCCTTGTACCCTCGT 59.610 47.826 0.00 0.00 40.10 4.18
4265 4797 4.590222 GGAAATATCCCTTGTACCCTCGTA 59.410 45.833 0.00 0.00 40.10 3.43
4266 4798 5.510349 GGAAATATCCCTTGTACCCTCGTAC 60.510 48.000 0.00 0.00 41.38 3.67
4267 4799 7.869417 GGAAATATCCCTTGTACCCTCGTACA 61.869 46.154 0.00 0.00 44.91 2.90
4268 4800 9.101595 GGAAATATCCCTTGTACCCTCGTACAT 62.102 44.444 4.09 0.00 45.35 2.29
4277 4809 2.083628 CCCTCGTACATTCTAGGGGT 57.916 55.000 0.00 0.00 44.32 4.95
4278 4810 2.395619 CCCTCGTACATTCTAGGGGTT 58.604 52.381 0.00 0.00 44.32 4.11
4279 4811 3.569491 CCCTCGTACATTCTAGGGGTTA 58.431 50.000 0.00 0.00 44.32 2.85
4280 4812 3.573110 CCCTCGTACATTCTAGGGGTTAG 59.427 52.174 0.00 0.00 44.32 2.34
4281 4813 3.005578 CCTCGTACATTCTAGGGGTTAGC 59.994 52.174 0.00 0.00 0.00 3.09
4282 4814 3.634504 TCGTACATTCTAGGGGTTAGCA 58.365 45.455 0.00 0.00 0.00 3.49
4283 4815 4.025360 TCGTACATTCTAGGGGTTAGCAA 58.975 43.478 0.00 0.00 0.00 3.91
4284 4816 4.467082 TCGTACATTCTAGGGGTTAGCAAA 59.533 41.667 0.00 0.00 0.00 3.68
4285 4817 5.129815 TCGTACATTCTAGGGGTTAGCAAAT 59.870 40.000 0.00 0.00 0.00 2.32
4286 4818 5.465724 CGTACATTCTAGGGGTTAGCAAATC 59.534 44.000 0.00 0.00 0.00 2.17
4287 4819 5.450818 ACATTCTAGGGGTTAGCAAATCA 57.549 39.130 0.00 0.00 0.00 2.57
4288 4820 6.018433 ACATTCTAGGGGTTAGCAAATCAT 57.982 37.500 0.00 0.00 0.00 2.45
4289 4821 7.149202 ACATTCTAGGGGTTAGCAAATCATA 57.851 36.000 0.00 0.00 0.00 2.15
4290 4822 7.582719 ACATTCTAGGGGTTAGCAAATCATAA 58.417 34.615 0.00 0.00 0.00 1.90
4291 4823 8.227507 ACATTCTAGGGGTTAGCAAATCATAAT 58.772 33.333 0.00 0.00 0.00 1.28
4292 4824 9.082313 CATTCTAGGGGTTAGCAAATCATAATT 57.918 33.333 0.00 0.00 0.00 1.40
4294 4826 9.793259 TTCTAGGGGTTAGCAAATCATAATTAG 57.207 33.333 0.00 0.00 0.00 1.73
4295 4827 9.166222 TCTAGGGGTTAGCAAATCATAATTAGA 57.834 33.333 0.00 0.00 0.00 2.10
4296 4828 9.220767 CTAGGGGTTAGCAAATCATAATTAGAC 57.779 37.037 0.00 0.00 0.00 2.59
4297 4829 7.816411 AGGGGTTAGCAAATCATAATTAGACT 58.184 34.615 0.00 0.00 0.00 3.24
4298 4830 8.945193 AGGGGTTAGCAAATCATAATTAGACTA 58.055 33.333 0.00 0.00 0.00 2.59
4299 4831 9.000486 GGGGTTAGCAAATCATAATTAGACTAC 58.000 37.037 0.00 0.00 0.00 2.73
4300 4832 9.780186 GGGTTAGCAAATCATAATTAGACTACT 57.220 33.333 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.793259 ACAGAAGTATTGAAAGTTTCCAGATTA 57.207 29.630 13.01 0.00 0.00 1.75
6 7 8.697507 ACAGAAGTATTGAAAGTTTCCAGATT 57.302 30.769 13.01 2.14 0.00 2.40
7 8 9.793259 TTACAGAAGTATTGAAAGTTTCCAGAT 57.207 29.630 13.01 7.18 0.00 2.90
8 9 9.052759 GTTACAGAAGTATTGAAAGTTTCCAGA 57.947 33.333 13.01 0.00 0.00 3.86
9 10 9.057089 AGTTACAGAAGTATTGAAAGTTTCCAG 57.943 33.333 13.01 0.00 0.00 3.86
10 11 8.974060 AGTTACAGAAGTATTGAAAGTTTCCA 57.026 30.769 13.01 2.30 0.00 3.53
32 33 9.201989 AGGAACAGAAGGAGAATTTTTAAAGTT 57.798 29.630 0.00 0.00 0.00 2.66
33 34 8.768501 AGGAACAGAAGGAGAATTTTTAAAGT 57.231 30.769 0.00 0.00 0.00 2.66
42 43 9.981460 ACAAATATTTAGGAACAGAAGGAGAAT 57.019 29.630 0.00 0.00 0.00 2.40
43 44 9.449719 GACAAATATTTAGGAACAGAAGGAGAA 57.550 33.333 0.00 0.00 0.00 2.87
44 45 8.826765 AGACAAATATTTAGGAACAGAAGGAGA 58.173 33.333 0.00 0.00 0.00 3.71
45 46 9.454859 AAGACAAATATTTAGGAACAGAAGGAG 57.545 33.333 0.00 0.00 0.00 3.69
46 47 9.807921 AAAGACAAATATTTAGGAACAGAAGGA 57.192 29.630 0.00 0.00 0.00 3.36
64 65 9.832445 ACTCATTTAAGAGTGTAGAAAGACAAA 57.168 29.630 0.00 0.00 46.58 2.83
162 163 9.950496 CATGCTACTCCCTATGTTTCTAAATAT 57.050 33.333 0.00 0.00 0.00 1.28
163 164 8.375506 CCATGCTACTCCCTATGTTTCTAAATA 58.624 37.037 0.00 0.00 0.00 1.40
164 165 7.072454 TCCATGCTACTCCCTATGTTTCTAAAT 59.928 37.037 0.00 0.00 0.00 1.40
165 166 6.385759 TCCATGCTACTCCCTATGTTTCTAAA 59.614 38.462 0.00 0.00 0.00 1.85
166 167 5.903010 TCCATGCTACTCCCTATGTTTCTAA 59.097 40.000 0.00 0.00 0.00 2.10
167 168 5.464069 TCCATGCTACTCCCTATGTTTCTA 58.536 41.667 0.00 0.00 0.00 2.10
168 169 4.298626 TCCATGCTACTCCCTATGTTTCT 58.701 43.478 0.00 0.00 0.00 2.52
169 170 4.689612 TCCATGCTACTCCCTATGTTTC 57.310 45.455 0.00 0.00 0.00 2.78
170 171 4.227300 TGTTCCATGCTACTCCCTATGTTT 59.773 41.667 0.00 0.00 0.00 2.83
171 172 3.780294 TGTTCCATGCTACTCCCTATGTT 59.220 43.478 0.00 0.00 0.00 2.71
172 173 3.384168 TGTTCCATGCTACTCCCTATGT 58.616 45.455 0.00 0.00 0.00 2.29
173 174 4.422073 TTGTTCCATGCTACTCCCTATG 57.578 45.455 0.00 0.00 0.00 2.23
174 175 4.660303 TGATTGTTCCATGCTACTCCCTAT 59.340 41.667 0.00 0.00 0.00 2.57
175 176 4.037222 TGATTGTTCCATGCTACTCCCTA 58.963 43.478 0.00 0.00 0.00 3.53
176 177 2.846206 TGATTGTTCCATGCTACTCCCT 59.154 45.455 0.00 0.00 0.00 4.20
177 178 3.281727 TGATTGTTCCATGCTACTCCC 57.718 47.619 0.00 0.00 0.00 4.30
178 179 5.643379 TTTTGATTGTTCCATGCTACTCC 57.357 39.130 0.00 0.00 0.00 3.85
211 212 3.124636 AGCGGATTTGATACGTCAACAAC 59.875 43.478 0.00 0.00 43.72 3.32
212 213 3.331150 AGCGGATTTGATACGTCAACAA 58.669 40.909 0.00 0.00 43.72 2.83
213 214 2.927477 GAGCGGATTTGATACGTCAACA 59.073 45.455 0.00 0.00 43.72 3.33
214 215 3.000322 CAGAGCGGATTTGATACGTCAAC 60.000 47.826 0.00 0.00 43.72 3.18
215 216 3.186909 CAGAGCGGATTTGATACGTCAA 58.813 45.455 0.00 0.00 42.41 3.18
216 217 2.481276 CCAGAGCGGATTTGATACGTCA 60.481 50.000 0.00 0.00 39.30 4.35
217 218 2.128035 CCAGAGCGGATTTGATACGTC 58.872 52.381 0.00 0.00 39.30 4.34
218 219 1.754803 TCCAGAGCGGATTTGATACGT 59.245 47.619 0.00 0.00 39.64 3.57
219 220 2.398498 CTCCAGAGCGGATTTGATACG 58.602 52.381 0.00 0.00 45.19 3.06
220 221 2.139118 GCTCCAGAGCGGATTTGATAC 58.861 52.381 3.49 0.00 45.19 2.24
221 222 2.533266 GCTCCAGAGCGGATTTGATA 57.467 50.000 3.49 0.00 45.19 2.15
222 223 3.393472 GCTCCAGAGCGGATTTGAT 57.607 52.632 3.49 0.00 45.19 2.57
223 224 4.941609 GCTCCAGAGCGGATTTGA 57.058 55.556 3.49 0.00 45.19 2.69
242 243 1.999735 CGCACATTCATAACGGTCAGT 59.000 47.619 0.00 0.00 0.00 3.41
251 252 2.087501 ACGTTCACCGCACATTCATA 57.912 45.000 0.00 0.00 41.42 2.15
324 325 1.137086 GTCTGGACTCGTGCCATGTAT 59.863 52.381 0.00 0.00 34.33 2.29
335 336 1.499049 GTTTGTCGGTGTCTGGACTC 58.501 55.000 2.38 0.00 34.31 3.36
341 342 0.472352 TAGGGGGTTTGTCGGTGTCT 60.472 55.000 0.00 0.00 0.00 3.41
388 389 2.112522 GCATATGTCTGTCGACTGTCG 58.887 52.381 23.33 23.33 40.86 4.35
446 456 3.436704 ACCGTCTGCAAATGTAATGTCTG 59.563 43.478 0.00 0.00 0.00 3.51
447 457 3.436704 CACCGTCTGCAAATGTAATGTCT 59.563 43.478 0.00 0.00 0.00 3.41
448 458 3.188460 ACACCGTCTGCAAATGTAATGTC 59.812 43.478 0.00 0.00 0.00 3.06
449 459 3.058293 CACACCGTCTGCAAATGTAATGT 60.058 43.478 0.00 0.00 0.00 2.71
450 460 3.491356 CACACCGTCTGCAAATGTAATG 58.509 45.455 0.00 0.00 0.00 1.90
451 461 2.095263 GCACACCGTCTGCAAATGTAAT 60.095 45.455 0.00 0.00 34.56 1.89
452 462 1.265635 GCACACCGTCTGCAAATGTAA 59.734 47.619 0.00 0.00 34.56 2.41
453 463 0.871722 GCACACCGTCTGCAAATGTA 59.128 50.000 0.00 0.00 34.56 2.29
503 513 4.322273 GCCTAAAACAGAGTACTACCGGTT 60.322 45.833 15.04 0.00 0.00 4.44
504 514 3.194329 GCCTAAAACAGAGTACTACCGGT 59.806 47.826 13.98 13.98 0.00 5.28
505 515 3.446516 AGCCTAAAACAGAGTACTACCGG 59.553 47.826 0.00 0.00 0.00 5.28
506 516 4.715527 AGCCTAAAACAGAGTACTACCG 57.284 45.455 0.00 0.00 0.00 4.02
507 517 5.046807 TGGAAGCCTAAAACAGAGTACTACC 60.047 44.000 0.00 0.00 0.00 3.18
551 599 6.183360 CGGAAAGGAAAGGAAAGAAAAACTCT 60.183 38.462 0.00 0.00 35.13 3.24
649 705 1.121407 TGGATCCGAGGGTGGCATAG 61.121 60.000 7.39 0.00 0.00 2.23
729 785 4.008933 GGCTGGGATCGATCGGGG 62.009 72.222 18.81 11.58 0.00 5.73
963 1034 1.741770 CTCCGTTCAAAGGCCCGAG 60.742 63.158 0.00 0.00 0.00 4.63
964 1035 2.345991 CTCCGTTCAAAGGCCCGA 59.654 61.111 0.00 0.00 0.00 5.14
965 1036 3.431725 GCTCCGTTCAAAGGCCCG 61.432 66.667 0.00 0.00 0.00 6.13
969 1040 1.302192 TTCCGGCTCCGTTCAAAGG 60.302 57.895 7.59 0.00 37.81 3.11
1085 1156 0.530870 GGCGAGAAAGGGAGATTCGG 60.531 60.000 0.00 0.00 32.04 4.30
1090 1161 4.129737 CGCGGCGAGAAAGGGAGA 62.130 66.667 19.16 0.00 0.00 3.71
1243 1488 2.250939 CGGGCAAGAAACTCGCACA 61.251 57.895 0.00 0.00 0.00 4.57
1272 1517 3.942829 AGATCAAGGAATCGCTTGTTCA 58.057 40.909 16.97 2.00 33.90 3.18
1273 1518 4.954092 AAGATCAAGGAATCGCTTGTTC 57.046 40.909 9.96 10.69 32.49 3.18
1430 1704 3.128589 GCGCTGATTGATTTTCTTACCCA 59.871 43.478 0.00 0.00 0.00 4.51
1454 1728 1.488261 GGACGGGATTCGATCGTTGC 61.488 60.000 15.94 9.22 42.43 4.17
1455 1729 0.102481 AGGACGGGATTCGATCGTTG 59.898 55.000 15.94 2.57 42.43 4.10
1456 1730 0.102481 CAGGACGGGATTCGATCGTT 59.898 55.000 15.94 3.86 42.43 3.85
1457 1731 1.734137 CAGGACGGGATTCGATCGT 59.266 57.895 15.94 0.00 42.43 3.73
1458 1732 1.661821 GCAGGACGGGATTCGATCG 60.662 63.158 9.36 9.36 42.43 3.69
1509 1796 0.872388 AACAAGAACGGATCGGCAAC 59.128 50.000 0.00 0.00 0.00 4.17
1510 1797 1.153353 GAACAAGAACGGATCGGCAA 58.847 50.000 0.00 0.00 0.00 4.52
1511 1798 1.011968 CGAACAAGAACGGATCGGCA 61.012 55.000 0.00 0.00 0.00 5.69
1512 1799 1.708027 CGAACAAGAACGGATCGGC 59.292 57.895 0.00 0.00 0.00 5.54
1513 1800 0.736325 AGCGAACAAGAACGGATCGG 60.736 55.000 0.00 0.00 34.29 4.18
1514 1801 0.366871 CAGCGAACAAGAACGGATCG 59.633 55.000 0.00 0.00 36.64 3.69
1650 1938 0.988145 ATGCAGGGATCGGAAAGGGA 60.988 55.000 0.00 0.00 0.00 4.20
1736 2058 1.888436 CTGGAGGAACAGCTACGGCA 61.888 60.000 0.00 0.00 41.70 5.69
1853 2178 1.674817 GGCTTCCTGATTTCGTCGGAA 60.675 52.381 0.00 0.00 37.26 4.30
1864 2189 1.228894 ACCTCAGACGGCTTCCTGA 60.229 57.895 0.00 0.00 37.77 3.86
1874 2199 2.363172 GGGGGCAGAGACCTCAGAC 61.363 68.421 0.00 0.00 26.34 3.51
1877 2202 1.920325 CTTGGGGGCAGAGACCTCA 60.920 63.158 0.00 0.00 41.04 3.86
1931 2268 1.374125 CGACCGATGGTTGAGCACA 60.374 57.895 0.00 0.00 39.36 4.57
1961 2298 2.361104 TTGGTTGGATGGAGCGGC 60.361 61.111 0.00 0.00 0.00 6.53
1965 2302 1.002134 AGGCGTTGGTTGGATGGAG 60.002 57.895 0.00 0.00 0.00 3.86
1966 2303 1.002624 GAGGCGTTGGTTGGATGGA 60.003 57.895 0.00 0.00 0.00 3.41
1980 2317 3.304726 GCAAAGTTTAGGACAACAGAGGC 60.305 47.826 0.00 0.00 0.00 4.70
2056 2407 3.986572 CCAGCTTGTCGATGTCATCTATC 59.013 47.826 11.04 2.35 0.00 2.08
2059 2410 1.827344 TCCAGCTTGTCGATGTCATCT 59.173 47.619 11.04 0.00 0.00 2.90
2083 2434 3.858868 GACGGCCAGCTCGTTGTCA 62.859 63.158 2.24 0.00 41.22 3.58
2095 2446 1.226888 GATGTAGTCCACGACGGCC 60.227 63.158 0.00 0.00 37.67 6.13
2104 2455 3.558829 TGTAGATGTCGTCGATGTAGTCC 59.441 47.826 4.21 0.00 0.00 3.85
2128 2479 5.221402 GGTTACCTGTGCCTCCTTATAGTAC 60.221 48.000 0.00 0.00 0.00 2.73
2134 2485 1.626825 GTGGTTACCTGTGCCTCCTTA 59.373 52.381 2.07 0.00 0.00 2.69
2159 2512 1.480137 CGCTGAAGACTGAAGAGGGAT 59.520 52.381 0.00 0.00 0.00 3.85
2171 2524 0.179059 TTGAACAGGCACGCTGAAGA 60.179 50.000 0.00 0.00 0.00 2.87
2172 2525 0.236711 CTTGAACAGGCACGCTGAAG 59.763 55.000 0.00 0.00 0.00 3.02
2173 2526 0.463654 ACTTGAACAGGCACGCTGAA 60.464 50.000 0.00 0.00 0.00 3.02
2175 2528 1.159713 TCACTTGAACAGGCACGCTG 61.160 55.000 0.00 0.00 0.00 5.18
2176 2529 1.146041 TCACTTGAACAGGCACGCT 59.854 52.632 0.00 0.00 0.00 5.07
2177 2530 1.279840 GTCACTTGAACAGGCACGC 59.720 57.895 0.00 0.00 0.00 5.34
2178 2531 0.304705 GTGTCACTTGAACAGGCACG 59.695 55.000 0.00 0.00 0.00 5.34
2179 2532 0.304705 CGTGTCACTTGAACAGGCAC 59.695 55.000 0.65 0.00 0.00 5.01
2182 2535 0.583438 CTGCGTGTCACTTGAACAGG 59.417 55.000 0.65 0.00 0.00 4.00
2186 2539 0.657312 CTTGCTGCGTGTCACTTGAA 59.343 50.000 0.65 0.00 0.00 2.69
2200 2553 0.940126 CGTCAGAACAGTTGCTTGCT 59.060 50.000 0.00 0.00 0.00 3.91
2467 2830 0.901124 GCGCCCAGATCTCCTCATAT 59.099 55.000 0.00 0.00 0.00 1.78
2505 2873 0.402121 GCAAAGGGGGTGAGAGAACT 59.598 55.000 0.00 0.00 0.00 3.01
2506 2874 0.110486 TGCAAAGGGGGTGAGAGAAC 59.890 55.000 0.00 0.00 0.00 3.01
2543 2932 0.966179 TTGAGGCAGCTACTCGAACA 59.034 50.000 11.62 0.00 37.79 3.18
2629 3052 4.533815 AGGAGTTATCGGCGATGGATATA 58.466 43.478 31.08 8.24 0.00 0.86
2690 3113 0.821301 TTCCACGCCATGCTGTTCAA 60.821 50.000 0.00 0.00 0.00 2.69
2827 3264 1.808891 GCAAATTCCATGGCAGATGGC 60.809 52.381 6.96 2.52 39.01 4.40
2828 3265 1.537348 CGCAAATTCCATGGCAGATGG 60.537 52.381 6.96 7.53 40.48 3.51
2829 3266 1.135527 ACGCAAATTCCATGGCAGATG 59.864 47.619 6.96 4.99 0.00 2.90
2832 3269 0.523968 CGACGCAAATTCCATGGCAG 60.524 55.000 6.96 0.00 0.00 4.85
2854 3295 2.307049 GAAACGAAATTCAGCACCACG 58.693 47.619 0.00 0.00 0.00 4.94
2855 3296 2.293399 AGGAAACGAAATTCAGCACCAC 59.707 45.455 0.00 0.00 0.00 4.16
2858 3299 2.814336 AGGAGGAAACGAAATTCAGCAC 59.186 45.455 0.00 0.00 0.00 4.40
3153 3626 7.596248 CCTGAAAACCAACAAACAGATAGAATG 59.404 37.037 0.00 0.00 0.00 2.67
3355 3830 7.422878 ACAGTAAGTAACTAAGCTTTCAAGC 57.577 36.000 3.20 3.13 44.18 4.01
3549 4073 0.518636 CCAAGACAACCGACAGCATG 59.481 55.000 0.00 0.00 46.00 4.06
3550 4074 0.108585 ACCAAGACAACCGACAGCAT 59.891 50.000 0.00 0.00 0.00 3.79
3551 4075 0.107410 AACCAAGACAACCGACAGCA 60.107 50.000 0.00 0.00 0.00 4.41
3555 4081 2.285977 ACTGAAACCAAGACAACCGAC 58.714 47.619 0.00 0.00 0.00 4.79
3561 4087 5.221342 ACAAACACAAACTGAAACCAAGACA 60.221 36.000 0.00 0.00 0.00 3.41
3569 4095 7.607250 ACTGGATTAACAAACACAAACTGAAA 58.393 30.769 0.00 0.00 0.00 2.69
3588 4114 4.570369 CCGCAAACAAAAGAAAAACTGGAT 59.430 37.500 0.00 0.00 0.00 3.41
3589 4115 3.929610 CCGCAAACAAAAGAAAAACTGGA 59.070 39.130 0.00 0.00 0.00 3.86
3590 4116 3.929610 TCCGCAAACAAAAGAAAAACTGG 59.070 39.130 0.00 0.00 0.00 4.00
3591 4117 4.492409 GCTCCGCAAACAAAAGAAAAACTG 60.492 41.667 0.00 0.00 0.00 3.16
3592 4118 3.616821 GCTCCGCAAACAAAAGAAAAACT 59.383 39.130 0.00 0.00 0.00 2.66
3593 4119 3.616821 AGCTCCGCAAACAAAAGAAAAAC 59.383 39.130 0.00 0.00 0.00 2.43
3610 4142 5.803967 CACTTATTCAGCAATGAAAAGCTCC 59.196 40.000 0.00 0.00 39.50 4.70
3611 4143 5.287992 GCACTTATTCAGCAATGAAAAGCTC 59.712 40.000 0.00 0.00 39.50 4.09
3612 4144 5.166398 GCACTTATTCAGCAATGAAAAGCT 58.834 37.500 0.00 0.00 42.94 3.74
3613 4145 4.925054 TGCACTTATTCAGCAATGAAAAGC 59.075 37.500 0.00 0.00 34.97 3.51
3614 4146 6.627690 CTGCACTTATTCAGCAATGAAAAG 57.372 37.500 0.00 3.89 37.89 2.27
3624 4156 5.032863 GCTAATGTTGCTGCACTTATTCAG 58.967 41.667 0.00 4.08 0.00 3.02
3625 4157 4.142403 GGCTAATGTTGCTGCACTTATTCA 60.142 41.667 0.00 0.00 0.00 2.57
3626 4158 4.142403 TGGCTAATGTTGCTGCACTTATTC 60.142 41.667 0.00 0.00 0.00 1.75
3627 4159 3.763360 TGGCTAATGTTGCTGCACTTATT 59.237 39.130 0.00 6.16 0.00 1.40
3628 4160 3.355378 TGGCTAATGTTGCTGCACTTAT 58.645 40.909 0.00 0.00 0.00 1.73
3629 4161 2.749076 CTGGCTAATGTTGCTGCACTTA 59.251 45.455 0.00 0.16 0.00 2.24
3630 4162 1.542915 CTGGCTAATGTTGCTGCACTT 59.457 47.619 0.00 0.00 0.00 3.16
3631 4163 1.171308 CTGGCTAATGTTGCTGCACT 58.829 50.000 0.00 0.00 0.00 4.40
3632 4164 1.167851 TCTGGCTAATGTTGCTGCAC 58.832 50.000 0.00 0.00 0.00 4.57
3633 4165 1.908344 TTCTGGCTAATGTTGCTGCA 58.092 45.000 0.00 0.00 0.00 4.41
3634 4166 3.302365 TTTTCTGGCTAATGTTGCTGC 57.698 42.857 0.00 0.00 0.00 5.25
3652 4184 6.509418 TTGCTTGCTCCTATAATCGTTTTT 57.491 33.333 0.00 0.00 0.00 1.94
3653 4185 6.509418 TTTGCTTGCTCCTATAATCGTTTT 57.491 33.333 0.00 0.00 0.00 2.43
3654 4186 6.509418 TTTTGCTTGCTCCTATAATCGTTT 57.491 33.333 0.00 0.00 0.00 3.60
3655 4187 6.509418 TTTTTGCTTGCTCCTATAATCGTT 57.491 33.333 0.00 0.00 0.00 3.85
3675 4207 3.834231 CCACTGTTGAGATGGGGATTTTT 59.166 43.478 0.00 0.00 0.00 1.94
3676 4208 3.075882 TCCACTGTTGAGATGGGGATTTT 59.924 43.478 0.00 0.00 34.03 1.82
3677 4209 2.649312 TCCACTGTTGAGATGGGGATTT 59.351 45.455 0.00 0.00 34.03 2.17
3678 4210 2.278245 TCCACTGTTGAGATGGGGATT 58.722 47.619 0.00 0.00 34.03 3.01
3679 4211 1.971149 TCCACTGTTGAGATGGGGAT 58.029 50.000 0.00 0.00 34.03 3.85
3680 4212 1.561076 CATCCACTGTTGAGATGGGGA 59.439 52.381 0.00 0.00 34.94 4.81
3681 4213 2.048444 CATCCACTGTTGAGATGGGG 57.952 55.000 4.93 0.00 34.94 4.96
3684 4216 2.118313 TGCCATCCACTGTTGAGATG 57.882 50.000 5.61 5.61 37.69 2.90
3685 4217 2.885135 TTGCCATCCACTGTTGAGAT 57.115 45.000 0.00 0.00 0.00 2.75
3686 4218 2.655090 TTTGCCATCCACTGTTGAGA 57.345 45.000 0.00 0.00 0.00 3.27
3687 4219 3.731652 TTTTTGCCATCCACTGTTGAG 57.268 42.857 0.00 0.00 0.00 3.02
3704 4236 8.421249 TCCTGGAACATTTGAGATATGTTTTT 57.579 30.769 0.00 0.00 44.05 1.94
3705 4237 8.421249 TTCCTGGAACATTTGAGATATGTTTT 57.579 30.769 4.68 0.00 44.05 2.43
3706 4238 8.421249 TTTCCTGGAACATTTGAGATATGTTT 57.579 30.769 9.04 0.00 44.05 2.83
3707 4239 8.421249 TTTTCCTGGAACATTTGAGATATGTT 57.579 30.769 9.04 0.00 46.03 2.71
3708 4240 8.421249 TTTTTCCTGGAACATTTGAGATATGT 57.579 30.769 9.04 0.00 38.20 2.29
3709 4241 9.880157 AATTTTTCCTGGAACATTTGAGATATG 57.120 29.630 9.04 0.00 38.20 1.78
3710 4242 9.880157 CAATTTTTCCTGGAACATTTGAGATAT 57.120 29.630 18.55 0.00 38.20 1.63
3711 4243 9.087871 TCAATTTTTCCTGGAACATTTGAGATA 57.912 29.630 20.58 6.88 38.20 1.98
3712 4244 7.965718 TCAATTTTTCCTGGAACATTTGAGAT 58.034 30.769 20.58 2.53 38.20 2.75
3713 4245 7.069826 ACTCAATTTTTCCTGGAACATTTGAGA 59.930 33.333 36.77 21.06 39.45 3.27
3714 4246 7.212274 ACTCAATTTTTCCTGGAACATTTGAG 58.788 34.615 32.95 32.95 40.96 3.02
3715 4247 7.123355 ACTCAATTTTTCCTGGAACATTTGA 57.877 32.000 21.98 21.98 38.20 2.69
3716 4248 7.495279 TGAACTCAATTTTTCCTGGAACATTTG 59.505 33.333 17.77 17.77 38.20 2.32
3717 4249 7.563906 TGAACTCAATTTTTCCTGGAACATTT 58.436 30.769 9.04 2.82 38.20 2.32
3718 4250 7.123355 TGAACTCAATTTTTCCTGGAACATT 57.877 32.000 9.04 7.83 38.20 2.71
3719 4251 6.729690 TGAACTCAATTTTTCCTGGAACAT 57.270 33.333 9.04 1.43 38.20 2.71
3720 4252 6.239289 GGATGAACTCAATTTTTCCTGGAACA 60.239 38.462 9.04 0.00 0.00 3.18
3721 4253 6.159293 GGATGAACTCAATTTTTCCTGGAAC 58.841 40.000 9.04 0.00 0.00 3.62
3722 4254 5.837979 TGGATGAACTCAATTTTTCCTGGAA 59.162 36.000 4.68 4.68 0.00 3.53
3723 4255 5.392995 TGGATGAACTCAATTTTTCCTGGA 58.607 37.500 0.00 0.00 0.00 3.86
3724 4256 5.726980 TGGATGAACTCAATTTTTCCTGG 57.273 39.130 0.00 0.00 0.00 4.45
3725 4257 8.436046 TTTTTGGATGAACTCAATTTTTCCTG 57.564 30.769 0.00 0.00 0.00 3.86
3814 4346 9.639563 AGTTTTCCCATAAAATGTTCCAAATTT 57.360 25.926 0.00 0.00 0.00 1.82
3815 4347 9.639563 AAGTTTTCCCATAAAATGTTCCAAATT 57.360 25.926 0.00 0.00 0.00 1.82
3818 4350 9.936759 GATAAGTTTTCCCATAAAATGTTCCAA 57.063 29.630 0.00 0.00 0.00 3.53
3819 4351 9.094578 TGATAAGTTTTCCCATAAAATGTTCCA 57.905 29.630 0.00 0.00 0.00 3.53
3820 4352 9.936759 TTGATAAGTTTTCCCATAAAATGTTCC 57.063 29.630 0.00 0.00 0.00 3.62
3898 4430 5.988287 AGAATTTTGCACTTCAGGGAAAAA 58.012 33.333 0.00 0.00 38.69 1.94
3899 4431 5.612725 AGAATTTTGCACTTCAGGGAAAA 57.387 34.783 0.00 0.00 39.36 2.29
3900 4432 6.723298 TTAGAATTTTGCACTTCAGGGAAA 57.277 33.333 0.00 0.00 0.00 3.13
3901 4433 6.723298 TTTAGAATTTTGCACTTCAGGGAA 57.277 33.333 0.00 0.00 0.00 3.97
3902 4434 6.723298 TTTTAGAATTTTGCACTTCAGGGA 57.277 33.333 0.00 0.00 0.00 4.20
3926 4458 9.772973 GGGAAATACCAAAATAGTTCAAAAGTT 57.227 29.630 0.00 0.00 41.20 2.66
3927 4459 9.154632 AGGGAAATACCAAAATAGTTCAAAAGT 57.845 29.630 0.00 0.00 41.20 2.66
3928 4460 9.996554 AAGGGAAATACCAAAATAGTTCAAAAG 57.003 29.630 0.00 0.00 41.20 2.27
3929 4461 9.771534 CAAGGGAAATACCAAAATAGTTCAAAA 57.228 29.630 0.00 0.00 41.20 2.44
3930 4462 8.371699 CCAAGGGAAATACCAAAATAGTTCAAA 58.628 33.333 0.00 0.00 41.20 2.69
3931 4463 7.526359 GCCAAGGGAAATACCAAAATAGTTCAA 60.526 37.037 0.00 0.00 41.20 2.69
3932 4464 6.071051 GCCAAGGGAAATACCAAAATAGTTCA 60.071 38.462 0.00 0.00 41.20 3.18
3933 4465 6.071051 TGCCAAGGGAAATACCAAAATAGTTC 60.071 38.462 0.00 0.00 41.20 3.01
3934 4466 5.782845 TGCCAAGGGAAATACCAAAATAGTT 59.217 36.000 0.00 0.00 41.20 2.24
3935 4467 5.337788 TGCCAAGGGAAATACCAAAATAGT 58.662 37.500 0.00 0.00 41.20 2.12
3936 4468 5.682212 GCTGCCAAGGGAAATACCAAAATAG 60.682 44.000 0.00 0.00 41.20 1.73
3937 4469 4.161377 GCTGCCAAGGGAAATACCAAAATA 59.839 41.667 0.00 0.00 41.20 1.40
3938 4470 3.055167 GCTGCCAAGGGAAATACCAAAAT 60.055 43.478 0.00 0.00 41.20 1.82
3939 4471 2.301583 GCTGCCAAGGGAAATACCAAAA 59.698 45.455 0.00 0.00 41.20 2.44
3940 4472 1.899142 GCTGCCAAGGGAAATACCAAA 59.101 47.619 0.00 0.00 41.20 3.28
3941 4473 1.555967 GCTGCCAAGGGAAATACCAA 58.444 50.000 0.00 0.00 41.20 3.67
3942 4474 0.679640 CGCTGCCAAGGGAAATACCA 60.680 55.000 0.00 0.00 41.20 3.25
3943 4475 2.004808 GCGCTGCCAAGGGAAATACC 62.005 60.000 0.00 0.00 38.63 2.73
3944 4476 1.312371 TGCGCTGCCAAGGGAAATAC 61.312 55.000 9.73 0.00 38.63 1.89
3945 4477 1.001517 TGCGCTGCCAAGGGAAATA 60.002 52.632 9.73 0.00 38.63 1.40
3946 4478 2.283101 TGCGCTGCCAAGGGAAAT 60.283 55.556 9.73 0.00 38.63 2.17
3947 4479 3.294493 GTGCGCTGCCAAGGGAAA 61.294 61.111 9.73 0.00 38.63 3.13
3953 4485 4.617520 TTCCTCGTGCGCTGCCAA 62.618 61.111 9.73 0.00 0.00 4.52
3956 4488 4.742201 TCCTTCCTCGTGCGCTGC 62.742 66.667 9.73 0.00 0.00 5.25
3957 4489 2.048222 TTCCTTCCTCGTGCGCTG 60.048 61.111 9.73 0.40 0.00 5.18
3958 4490 2.262915 CTTCCTTCCTCGTGCGCT 59.737 61.111 9.73 0.00 0.00 5.92
3959 4491 2.558554 TAGCTTCCTTCCTCGTGCGC 62.559 60.000 0.00 0.00 0.00 6.09
3960 4492 0.526524 CTAGCTTCCTTCCTCGTGCG 60.527 60.000 0.00 0.00 0.00 5.34
3961 4493 0.179097 CCTAGCTTCCTTCCTCGTGC 60.179 60.000 0.00 0.00 0.00 5.34
3962 4494 0.179097 GCCTAGCTTCCTTCCTCGTG 60.179 60.000 0.00 0.00 0.00 4.35
3963 4495 0.614979 TGCCTAGCTTCCTTCCTCGT 60.615 55.000 0.00 0.00 0.00 4.18
3964 4496 0.179097 GTGCCTAGCTTCCTTCCTCG 60.179 60.000 0.00 0.00 0.00 4.63
3965 4497 0.905357 TGTGCCTAGCTTCCTTCCTC 59.095 55.000 0.00 0.00 0.00 3.71
3966 4498 0.615850 GTGTGCCTAGCTTCCTTCCT 59.384 55.000 0.00 0.00 0.00 3.36
3967 4499 0.324943 TGTGTGCCTAGCTTCCTTCC 59.675 55.000 0.00 0.00 0.00 3.46
3968 4500 2.093235 AGATGTGTGCCTAGCTTCCTTC 60.093 50.000 0.00 0.00 0.00 3.46
3969 4501 1.912043 AGATGTGTGCCTAGCTTCCTT 59.088 47.619 0.00 0.00 0.00 3.36
3970 4502 1.484240 GAGATGTGTGCCTAGCTTCCT 59.516 52.381 0.00 0.00 0.00 3.36
3971 4503 1.208052 TGAGATGTGTGCCTAGCTTCC 59.792 52.381 0.00 0.00 0.00 3.46
3972 4504 2.680312 TGAGATGTGTGCCTAGCTTC 57.320 50.000 0.00 0.00 0.00 3.86
3973 4505 3.423539 TTTGAGATGTGTGCCTAGCTT 57.576 42.857 0.00 0.00 0.00 3.74
3974 4506 3.641434 ATTTGAGATGTGTGCCTAGCT 57.359 42.857 0.00 0.00 0.00 3.32
3975 4507 3.944015 AGAATTTGAGATGTGTGCCTAGC 59.056 43.478 0.00 0.00 0.00 3.42
3976 4508 6.506500 AAAGAATTTGAGATGTGTGCCTAG 57.493 37.500 0.00 0.00 36.60 3.02
3977 4509 6.899393 AAAAGAATTTGAGATGTGTGCCTA 57.101 33.333 0.00 0.00 39.02 3.93
3978 4510 5.796424 AAAAGAATTTGAGATGTGTGCCT 57.204 34.783 0.00 0.00 39.02 4.75
3979 4511 5.863935 GGTAAAAGAATTTGAGATGTGTGCC 59.136 40.000 0.00 0.00 39.02 5.01
3980 4512 5.569059 CGGTAAAAGAATTTGAGATGTGTGC 59.431 40.000 0.00 0.00 39.02 4.57
3981 4513 6.086222 CCGGTAAAAGAATTTGAGATGTGTG 58.914 40.000 0.00 0.00 39.02 3.82
3982 4514 5.335661 GCCGGTAAAAGAATTTGAGATGTGT 60.336 40.000 1.90 0.00 39.02 3.72
3983 4515 5.095490 GCCGGTAAAAGAATTTGAGATGTG 58.905 41.667 1.90 0.00 39.02 3.21
3984 4516 4.764823 TGCCGGTAAAAGAATTTGAGATGT 59.235 37.500 1.90 0.00 39.02 3.06
3985 4517 5.309323 TGCCGGTAAAAGAATTTGAGATG 57.691 39.130 1.90 0.00 39.02 2.90
3986 4518 5.975693 TTGCCGGTAAAAGAATTTGAGAT 57.024 34.783 1.06 0.00 39.02 2.75
3987 4519 5.776173 TTTGCCGGTAAAAGAATTTGAGA 57.224 34.783 15.87 0.00 39.02 3.27
3988 4520 9.965824 ATATATTTGCCGGTAAAAGAATTTGAG 57.034 29.630 21.85 0.00 39.02 3.02
3994 4526 8.344098 CGGTTTATATATTTGCCGGTAAAAGAA 58.656 33.333 21.85 10.71 36.05 2.52
3995 4527 7.714377 TCGGTTTATATATTTGCCGGTAAAAGA 59.286 33.333 21.85 13.01 39.64 2.52
3996 4528 7.863666 TCGGTTTATATATTTGCCGGTAAAAG 58.136 34.615 21.85 4.94 39.64 2.27
3997 4529 7.798596 TCGGTTTATATATTTGCCGGTAAAA 57.201 32.000 21.85 13.83 39.64 1.52
3998 4530 7.798596 TTCGGTTTATATATTTGCCGGTAAA 57.201 32.000 20.35 20.35 39.64 2.01
3999 4531 7.982761 ATTCGGTTTATATATTTGCCGGTAA 57.017 32.000 0.00 0.00 39.64 2.85
4000 4532 7.548780 GGTATTCGGTTTATATATTTGCCGGTA 59.451 37.037 1.90 0.00 39.64 4.02
4001 4533 6.372381 GGTATTCGGTTTATATATTTGCCGGT 59.628 38.462 1.90 10.78 39.64 5.28
4002 4534 6.372103 TGGTATTCGGTTTATATATTTGCCGG 59.628 38.462 16.24 0.00 39.64 6.13
4003 4535 7.367159 TGGTATTCGGTTTATATATTTGCCG 57.633 36.000 12.45 12.45 40.43 5.69
4004 4536 9.401873 GTTTGGTATTCGGTTTATATATTTGCC 57.598 33.333 0.00 0.00 0.00 4.52
4005 4537 9.401873 GGTTTGGTATTCGGTTTATATATTTGC 57.598 33.333 0.00 0.00 0.00 3.68
4006 4538 9.601971 CGGTTTGGTATTCGGTTTATATATTTG 57.398 33.333 0.00 0.00 0.00 2.32
4007 4539 9.558396 TCGGTTTGGTATTCGGTTTATATATTT 57.442 29.630 0.00 0.00 0.00 1.40
4008 4540 9.558396 TTCGGTTTGGTATTCGGTTTATATATT 57.442 29.630 0.00 0.00 0.00 1.28
4009 4541 9.558396 TTTCGGTTTGGTATTCGGTTTATATAT 57.442 29.630 0.00 0.00 0.00 0.86
4010 4542 8.825745 GTTTCGGTTTGGTATTCGGTTTATATA 58.174 33.333 0.00 0.00 0.00 0.86
4011 4543 7.553760 AGTTTCGGTTTGGTATTCGGTTTATAT 59.446 33.333 0.00 0.00 0.00 0.86
4012 4544 6.878389 AGTTTCGGTTTGGTATTCGGTTTATA 59.122 34.615 0.00 0.00 0.00 0.98
4013 4545 5.706833 AGTTTCGGTTTGGTATTCGGTTTAT 59.293 36.000 0.00 0.00 0.00 1.40
4014 4546 5.062528 AGTTTCGGTTTGGTATTCGGTTTA 58.937 37.500 0.00 0.00 0.00 2.01
4015 4547 3.884693 AGTTTCGGTTTGGTATTCGGTTT 59.115 39.130 0.00 0.00 0.00 3.27
4016 4548 3.479489 AGTTTCGGTTTGGTATTCGGTT 58.521 40.909 0.00 0.00 0.00 4.44
4017 4549 3.069289 GAGTTTCGGTTTGGTATTCGGT 58.931 45.455 0.00 0.00 0.00 4.69
4018 4550 2.093152 CGAGTTTCGGTTTGGTATTCGG 59.907 50.000 0.00 0.00 36.00 4.30
4019 4551 3.363788 CGAGTTTCGGTTTGGTATTCG 57.636 47.619 0.00 0.00 36.00 3.34
4031 4563 6.632765 CAAAAATTTGGTTAACCGAGTTTCG 58.367 36.000 26.90 19.70 38.08 3.46
4087 4619 8.964150 CGTCTTTTAAAATTCTAACAAGGTTGG 58.036 33.333 0.09 0.00 0.00 3.77
4088 4620 9.724839 TCGTCTTTTAAAATTCTAACAAGGTTG 57.275 29.630 0.09 0.00 0.00 3.77
4101 4633 9.893305 CAGTTTCTACCATTCGTCTTTTAAAAT 57.107 29.630 0.09 0.00 0.00 1.82
4102 4634 9.111613 TCAGTTTCTACCATTCGTCTTTTAAAA 57.888 29.630 0.00 0.00 0.00 1.52
4103 4635 8.665643 TCAGTTTCTACCATTCGTCTTTTAAA 57.334 30.769 0.00 0.00 0.00 1.52
4104 4636 8.665643 TTCAGTTTCTACCATTCGTCTTTTAA 57.334 30.769 0.00 0.00 0.00 1.52
4105 4637 8.842358 ATTCAGTTTCTACCATTCGTCTTTTA 57.158 30.769 0.00 0.00 0.00 1.52
4106 4638 7.745620 ATTCAGTTTCTACCATTCGTCTTTT 57.254 32.000 0.00 0.00 0.00 2.27
4107 4639 9.449719 AATATTCAGTTTCTACCATTCGTCTTT 57.550 29.630 0.00 0.00 0.00 2.52
4108 4640 9.449719 AAATATTCAGTTTCTACCATTCGTCTT 57.550 29.630 0.00 0.00 0.00 3.01
4109 4641 9.449719 AAAATATTCAGTTTCTACCATTCGTCT 57.550 29.630 0.00 0.00 0.00 4.18
4135 4667 3.555139 CGCGTGGGTATTCGGTATAAAAA 59.445 43.478 0.00 0.00 0.00 1.94
4136 4668 3.122297 CGCGTGGGTATTCGGTATAAAA 58.878 45.455 0.00 0.00 0.00 1.52
4137 4669 2.100584 ACGCGTGGGTATTCGGTATAAA 59.899 45.455 12.93 0.00 0.00 1.40
4138 4670 1.680735 ACGCGTGGGTATTCGGTATAA 59.319 47.619 12.93 0.00 0.00 0.98
4139 4671 1.317613 ACGCGTGGGTATTCGGTATA 58.682 50.000 12.93 0.00 0.00 1.47
4140 4672 1.267806 CTACGCGTGGGTATTCGGTAT 59.732 52.381 24.59 0.00 0.00 2.73
4141 4673 0.662619 CTACGCGTGGGTATTCGGTA 59.337 55.000 24.59 0.00 0.00 4.02
4142 4674 1.315257 ACTACGCGTGGGTATTCGGT 61.315 55.000 26.70 0.00 0.00 4.69
4143 4675 0.868602 CACTACGCGTGGGTATTCGG 60.869 60.000 26.70 7.21 40.02 4.30
4144 4676 1.477030 GCACTACGCGTGGGTATTCG 61.477 60.000 26.70 11.59 43.97 3.34
4145 4677 0.458889 TGCACTACGCGTGGGTATTC 60.459 55.000 26.70 14.25 46.97 1.75
4146 4678 0.738412 GTGCACTACGCGTGGGTATT 60.738 55.000 26.70 2.20 46.97 1.89
4147 4679 1.153706 GTGCACTACGCGTGGGTAT 60.154 57.895 26.70 2.61 46.97 2.73
4148 4680 2.259204 GTGCACTACGCGTGGGTA 59.741 61.111 26.70 12.23 46.97 3.69
4149 4681 3.918977 TGTGCACTACGCGTGGGT 61.919 61.111 26.70 19.19 46.97 4.51
4150 4682 3.411351 GTGTGCACTACGCGTGGG 61.411 66.667 26.70 18.53 46.97 4.61
4155 4687 0.732880 ACATCTCGTGTGCACTACGC 60.733 55.000 26.44 12.09 40.28 4.42
4156 4688 1.698165 AACATCTCGTGTGCACTACG 58.302 50.000 25.76 25.76 41.14 3.51
4157 4689 3.059044 CGTTAACATCTCGTGTGCACTAC 59.941 47.826 19.41 13.21 41.14 2.73
4158 4690 3.058085 TCGTTAACATCTCGTGTGCACTA 60.058 43.478 19.41 1.23 41.14 2.74
4159 4691 2.058798 CGTTAACATCTCGTGTGCACT 58.941 47.619 19.41 0.00 41.14 4.40
4160 4692 2.055838 TCGTTAACATCTCGTGTGCAC 58.944 47.619 10.75 10.75 41.14 4.57
4161 4693 2.055838 GTCGTTAACATCTCGTGTGCA 58.944 47.619 6.39 0.00 41.14 4.57
4162 4694 2.055838 TGTCGTTAACATCTCGTGTGC 58.944 47.619 6.39 0.00 41.14 4.57
4163 4695 3.734231 AGTTGTCGTTAACATCTCGTGTG 59.266 43.478 6.39 0.00 41.14 3.82
4164 4696 3.973657 AGTTGTCGTTAACATCTCGTGT 58.026 40.909 6.39 0.00 44.84 4.49
4165 4697 4.547956 GAGTTGTCGTTAACATCTCGTG 57.452 45.455 6.39 0.00 42.10 4.35
4169 4701 4.038763 TCCACAGAGTTGTCGTTAACATCT 59.961 41.667 6.39 0.00 39.99 2.90
4170 4702 4.304110 TCCACAGAGTTGTCGTTAACATC 58.696 43.478 6.39 0.00 37.82 3.06
4171 4703 4.330944 TCCACAGAGTTGTCGTTAACAT 57.669 40.909 6.39 0.00 37.82 2.71
4172 4704 3.804786 TCCACAGAGTTGTCGTTAACA 57.195 42.857 6.39 0.00 34.62 2.41
4173 4705 5.467705 AGTATCCACAGAGTTGTCGTTAAC 58.532 41.667 0.00 0.00 34.62 2.01
4174 4706 5.242171 TGAGTATCCACAGAGTTGTCGTTAA 59.758 40.000 0.00 0.00 34.62 2.01
4175 4707 4.763279 TGAGTATCCACAGAGTTGTCGTTA 59.237 41.667 0.00 0.00 34.62 3.18
4176 4708 3.572682 TGAGTATCCACAGAGTTGTCGTT 59.427 43.478 0.00 0.00 34.62 3.85
4177 4709 3.154710 TGAGTATCCACAGAGTTGTCGT 58.845 45.455 0.00 0.00 34.62 4.34
4178 4710 3.850122 TGAGTATCCACAGAGTTGTCG 57.150 47.619 0.00 0.00 34.62 4.35
4179 4711 3.868077 GCATGAGTATCCACAGAGTTGTC 59.132 47.826 0.00 0.00 34.62 3.18
4180 4712 3.261643 TGCATGAGTATCCACAGAGTTGT 59.738 43.478 0.00 0.00 38.31 3.32
4181 4713 3.620374 GTGCATGAGTATCCACAGAGTTG 59.380 47.826 0.00 0.00 0.00 3.16
4182 4714 3.369892 GGTGCATGAGTATCCACAGAGTT 60.370 47.826 0.00 0.00 0.00 3.01
4183 4715 2.169352 GGTGCATGAGTATCCACAGAGT 59.831 50.000 0.00 0.00 0.00 3.24
4184 4716 2.484417 GGGTGCATGAGTATCCACAGAG 60.484 54.545 0.00 0.00 29.85 3.35
4185 4717 1.486310 GGGTGCATGAGTATCCACAGA 59.514 52.381 0.00 0.00 29.85 3.41
4186 4718 1.807755 CGGGTGCATGAGTATCCACAG 60.808 57.143 0.00 0.00 28.42 3.66
4187 4719 0.177836 CGGGTGCATGAGTATCCACA 59.822 55.000 0.00 0.00 28.42 4.17
4188 4720 1.160329 GCGGGTGCATGAGTATCCAC 61.160 60.000 0.00 0.00 42.15 4.02
4189 4721 1.146041 GCGGGTGCATGAGTATCCA 59.854 57.895 0.00 0.00 42.15 3.41
4190 4722 1.598130 GGCGGGTGCATGAGTATCC 60.598 63.158 0.00 0.00 45.35 2.59
4191 4723 1.598130 GGGCGGGTGCATGAGTATC 60.598 63.158 0.00 0.00 45.35 2.24
4192 4724 2.510906 GGGCGGGTGCATGAGTAT 59.489 61.111 0.00 0.00 45.35 2.12
4193 4725 3.792736 GGGGCGGGTGCATGAGTA 61.793 66.667 0.00 0.00 45.35 2.59
4211 4743 3.434319 CATGAGGCCCACGTGCAC 61.434 66.667 10.91 6.82 0.00 4.57
4212 4744 3.952508 ACATGAGGCCCACGTGCA 61.953 61.111 10.91 2.17 0.00 4.57
4213 4745 3.434319 CACATGAGGCCCACGTGC 61.434 66.667 10.91 0.00 31.92 5.34
4214 4746 1.742880 CTCACATGAGGCCCACGTG 60.743 63.158 9.08 9.08 40.08 4.49
4215 4747 2.665000 CTCACATGAGGCCCACGT 59.335 61.111 0.00 0.00 38.48 4.49
4223 4755 1.209019 CCCCAAGACTCCTCACATGAG 59.791 57.143 0.00 1.63 41.71 2.90
4224 4756 1.203300 TCCCCAAGACTCCTCACATGA 60.203 52.381 0.00 0.00 0.00 3.07
4225 4757 1.279496 TCCCCAAGACTCCTCACATG 58.721 55.000 0.00 0.00 0.00 3.21
4226 4758 2.044793 TTCCCCAAGACTCCTCACAT 57.955 50.000 0.00 0.00 0.00 3.21
4227 4759 1.814429 TTTCCCCAAGACTCCTCACA 58.186 50.000 0.00 0.00 0.00 3.58
4228 4760 4.445019 GGATATTTCCCCAAGACTCCTCAC 60.445 50.000 0.00 0.00 35.84 3.51
4229 4761 3.716872 GGATATTTCCCCAAGACTCCTCA 59.283 47.826 0.00 0.00 35.84 3.86
4230 4762 4.359434 GGATATTTCCCCAAGACTCCTC 57.641 50.000 0.00 0.00 35.84 3.71
4242 4774 3.390311 ACGAGGGTACAAGGGATATTTCC 59.610 47.826 0.00 0.00 41.77 3.13
4243 4775 4.684484 ACGAGGGTACAAGGGATATTTC 57.316 45.455 0.00 0.00 0.00 2.17
4244 4776 5.541953 GTACGAGGGTACAAGGGATATTT 57.458 43.478 0.00 0.00 46.65 1.40
4255 4787 2.889678 CCCCTAGAATGTACGAGGGTAC 59.110 54.545 11.62 0.00 46.61 3.34
4256 4788 2.515429 ACCCCTAGAATGTACGAGGGTA 59.485 50.000 11.62 0.00 46.61 3.69
4257 4789 1.290130 ACCCCTAGAATGTACGAGGGT 59.710 52.381 11.62 0.00 46.61 4.34
4259 4791 3.005578 GCTAACCCCTAGAATGTACGAGG 59.994 52.174 0.00 0.00 33.50 4.63
4260 4792 3.635373 TGCTAACCCCTAGAATGTACGAG 59.365 47.826 0.00 0.00 0.00 4.18
4261 4793 3.634504 TGCTAACCCCTAGAATGTACGA 58.365 45.455 0.00 0.00 0.00 3.43
4262 4794 4.395959 TTGCTAACCCCTAGAATGTACG 57.604 45.455 0.00 0.00 0.00 3.67
4263 4795 6.354130 TGATTTGCTAACCCCTAGAATGTAC 58.646 40.000 0.00 0.00 0.00 2.90
4264 4796 6.569127 TGATTTGCTAACCCCTAGAATGTA 57.431 37.500 0.00 0.00 0.00 2.29
4265 4797 5.450818 TGATTTGCTAACCCCTAGAATGT 57.549 39.130 0.00 0.00 0.00 2.71
4266 4798 8.641498 ATTATGATTTGCTAACCCCTAGAATG 57.359 34.615 0.00 0.00 0.00 2.67
4268 4800 9.793259 CTAATTATGATTTGCTAACCCCTAGAA 57.207 33.333 0.00 0.00 0.00 2.10
4269 4801 9.166222 TCTAATTATGATTTGCTAACCCCTAGA 57.834 33.333 0.00 0.00 0.00 2.43
4270 4802 9.220767 GTCTAATTATGATTTGCTAACCCCTAG 57.779 37.037 0.00 0.00 0.00 3.02
4271 4803 8.945193 AGTCTAATTATGATTTGCTAACCCCTA 58.055 33.333 0.00 0.00 0.00 3.53
4272 4804 7.816411 AGTCTAATTATGATTTGCTAACCCCT 58.184 34.615 0.00 0.00 0.00 4.79
4273 4805 9.000486 GTAGTCTAATTATGATTTGCTAACCCC 58.000 37.037 0.00 0.00 0.00 4.95
4274 4806 9.780186 AGTAGTCTAATTATGATTTGCTAACCC 57.220 33.333 0.00 0.00 0.00 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.