Multiple sequence alignment - TraesCS1B01G316900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G316900 chr1B 100.000 2369 0 0 1 2369 541403777 541401409 0.000000e+00 4375.0
1 TraesCS1B01G316900 chr1B 88.444 1099 93 11 468 1544 619098057 619096971 0.000000e+00 1295.0
2 TraesCS1B01G316900 chr1B 95.092 163 8 0 1381 1543 346173242 346173404 8.400000e-65 257.0
3 TraesCS1B01G316900 chr1B 84.615 117 16 2 527 642 133823337 133823452 5.350000e-22 115.0
4 TraesCS1B01G316900 chr1B 76.344 186 37 7 246 428 541329042 541328861 2.510000e-15 93.5
5 TraesCS1B01G316900 chr1B 88.406 69 6 1 1536 1604 619096961 619096895 5.430000e-12 82.4
6 TraesCS1B01G316900 chr1B 92.593 54 2 1 1536 1589 346173415 346173466 2.520000e-10 76.8
7 TraesCS1B01G316900 chr1B 100.000 40 0 0 1598 1637 619096797 619096758 9.080000e-10 75.0
8 TraesCS1B01G316900 chr5B 89.946 1104 88 9 462 1543 493288404 493287302 0.000000e+00 1402.0
9 TraesCS1B01G316900 chr5B 86.567 67 6 2 1540 1606 493287287 493287224 1.170000e-08 71.3
10 TraesCS1B01G316900 chr5B 100.000 37 0 0 1601 1637 493287124 493287088 4.220000e-08 69.4
11 TraesCS1B01G316900 chr2D 92.949 624 34 7 990 1606 69242694 69243314 0.000000e+00 900.0
12 TraesCS1B01G316900 chr2D 85.639 571 39 9 461 988 69242020 69242590 5.720000e-156 560.0
13 TraesCS1B01G316900 chr2D 96.610 59 2 0 2088 2146 17957566 17957624 5.390000e-17 99.0
14 TraesCS1B01G316900 chr2D 95.122 41 2 0 1597 1637 69243410 69243450 5.470000e-07 65.8
15 TraesCS1B01G316900 chr2B 96.134 388 15 0 1703 2090 790240413 790240800 3.320000e-178 634.0
16 TraesCS1B01G316900 chr2B 95.262 401 15 3 1694 2092 759258852 759258454 1.190000e-177 632.0
17 TraesCS1B01G316900 chr2B 95.866 387 16 0 1701 2087 588362045 588362431 5.560000e-176 627.0
18 TraesCS1B01G316900 chr2B 95.531 179 8 0 2148 2326 449189132 449188954 1.070000e-73 287.0
19 TraesCS1B01G316900 chr6B 96.114 386 15 0 1702 2087 567613695 567613310 4.300000e-177 630.0
20 TraesCS1B01G316900 chr7A 95.844 385 16 0 1703 2087 536141987 536141603 7.190000e-175 623.0
21 TraesCS1B01G316900 chr7A 92.775 346 25 0 990 1335 459461316 459460971 3.520000e-138 501.0
22 TraesCS1B01G316900 chr5A 95.844 385 16 0 1703 2087 295308037 295308421 7.190000e-175 623.0
23 TraesCS1B01G316900 chr5A 87.006 177 23 0 464 640 576265473 576265297 1.440000e-47 200.0
24 TraesCS1B01G316900 chr5A 87.582 153 15 4 1401 1551 662348416 662348266 8.700000e-40 174.0
25 TraesCS1B01G316900 chr3B 95.844 385 16 0 1703 2087 79089241 79089625 7.190000e-175 623.0
26 TraesCS1B01G316900 chr3B 95.531 179 8 0 2148 2326 92235718 92235540 1.070000e-73 287.0
27 TraesCS1B01G316900 chr3B 95.531 179 8 0 2148 2326 768289639 768289461 1.070000e-73 287.0
28 TraesCS1B01G316900 chr3B 94.444 72 4 0 909 980 673837074 673837003 6.920000e-21 111.0
29 TraesCS1B01G316900 chr3B 95.082 61 3 0 909 969 673849848 673849788 1.940000e-16 97.1
30 TraesCS1B01G316900 chr3B 97.778 45 1 0 1336 1380 673836784 673836740 7.020000e-11 78.7
31 TraesCS1B01G316900 chr6A 94.486 399 22 0 1701 2099 472410088 472409690 1.200000e-172 616.0
32 TraesCS1B01G316900 chr6A 95.531 179 8 0 2148 2326 597228331 597228153 1.070000e-73 287.0
33 TraesCS1B01G316900 chr6A 96.610 59 2 0 2088 2146 338525299 338525241 5.390000e-17 99.0
34 TraesCS1B01G316900 chr7D 87.591 548 45 7 462 988 266893931 266894476 4.330000e-172 614.0
35 TraesCS1B01G316900 chr7D 91.362 301 25 1 990 1290 266894580 266894879 6.090000e-111 411.0
36 TraesCS1B01G316900 chr7D 83.784 185 30 0 458 642 520992673 520992489 2.420000e-40 176.0
37 TraesCS1B01G316900 chr7D 97.561 41 1 0 1597 1637 266895098 266895138 1.170000e-08 71.3
38 TraesCS1B01G316900 chr3A 95.337 386 18 0 1702 2087 192412122 192412507 4.330000e-172 614.0
39 TraesCS1B01G316900 chr3A 86.420 81 8 3 909 988 647700366 647700288 4.200000e-13 86.1
40 TraesCS1B01G316900 chr1D 94.144 222 11 2 1 221 403185178 403184958 1.050000e-88 337.0
41 TraesCS1B01G316900 chr1D 95.706 163 7 0 1381 1543 267376272 267376110 1.810000e-66 263.0
42 TraesCS1B01G316900 chr1D 94.545 165 7 2 221 384 403184917 403184754 1.090000e-63 254.0
43 TraesCS1B01G316900 chr1D 95.294 85 4 0 378 462 403184231 403184147 4.110000e-28 135.0
44 TraesCS1B01G316900 chr1D 92.593 54 2 1 1536 1589 267376099 267376048 2.520000e-10 76.8
45 TraesCS1B01G316900 chrUn 95.531 179 8 0 2148 2326 382047330 382047152 1.070000e-73 287.0
46 TraesCS1B01G316900 chrUn 95.531 179 8 0 2148 2326 385974413 385974235 1.070000e-73 287.0
47 TraesCS1B01G316900 chrUn 95.531 179 8 0 2148 2326 389752522 389752344 1.070000e-73 287.0
48 TraesCS1B01G316900 chrUn 100.000 66 0 0 1637 1702 182468347 182468412 3.200000e-24 122.0
49 TraesCS1B01G316900 chrUn 100.000 66 0 0 1637 1702 434111408 434111473 3.200000e-24 122.0
50 TraesCS1B01G316900 chrUn 100.000 66 0 0 1637 1702 446444517 446444582 3.200000e-24 122.0
51 TraesCS1B01G316900 chrUn 100.000 66 0 0 1637 1702 446906895 446906960 3.200000e-24 122.0
52 TraesCS1B01G316900 chrUn 100.000 66 0 0 1637 1702 454096759 454096694 3.200000e-24 122.0
53 TraesCS1B01G316900 chrUn 96.610 59 2 0 2088 2146 182468405 182468463 5.390000e-17 99.0
54 TraesCS1B01G316900 chrUn 96.610 59 2 0 2088 2146 434111466 434111524 5.390000e-17 99.0
55 TraesCS1B01G316900 chrUn 96.610 59 2 0 2088 2146 446444575 446444633 5.390000e-17 99.0
56 TraesCS1B01G316900 chrUn 96.610 59 2 0 2088 2146 446906953 446907011 5.390000e-17 99.0
57 TraesCS1B01G316900 chrUn 96.610 59 2 0 2088 2146 454096701 454096643 5.390000e-17 99.0
58 TraesCS1B01G316900 chr2A 97.605 167 4 0 2148 2314 721330847 721331013 1.070000e-73 287.0
59 TraesCS1B01G316900 chr6D 97.006 167 5 0 2148 2314 369967452 369967618 4.990000e-72 281.0
60 TraesCS1B01G316900 chr6D 83.929 112 16 2 530 640 11697175 11697065 3.220000e-19 106.0
61 TraesCS1B01G316900 chr6D 82.609 115 18 2 527 640 456644371 456644484 1.500000e-17 100.0
62 TraesCS1B01G316900 chr1A 88.235 238 22 3 227 459 498401730 498401494 1.790000e-71 279.0
63 TraesCS1B01G316900 chr1A 88.789 223 19 5 1 221 498404990 498404772 3.880000e-68 268.0
64 TraesCS1B01G316900 chr1A 95.706 163 7 0 1381 1543 335835618 335835780 1.810000e-66 263.0
65 TraesCS1B01G316900 chr1A 100.000 66 0 0 1637 1702 238146541 238146606 3.200000e-24 122.0
66 TraesCS1B01G316900 chr1A 100.000 66 0 0 1637 1702 334070821 334070886 3.200000e-24 122.0
67 TraesCS1B01G316900 chr1A 96.610 59 2 0 2088 2146 238146599 238146657 5.390000e-17 99.0
68 TraesCS1B01G316900 chr1A 92.593 54 2 1 1536 1589 335835791 335835842 2.520000e-10 76.8
69 TraesCS1B01G316900 chr3D 89.503 181 18 1 462 642 126232679 126232858 6.590000e-56 228.0
70 TraesCS1B01G316900 chr3D 82.857 175 29 1 453 626 574439536 574439710 3.150000e-34 156.0
71 TraesCS1B01G316900 chr3D 81.215 181 34 0 462 642 47170216 47170036 1.900000e-31 147.0
72 TraesCS1B01G316900 chr3D 93.056 72 5 0 909 980 511655584 511655513 3.220000e-19 106.0
73 TraesCS1B01G316900 chr3D 80.292 137 27 0 461 597 537653930 537653794 1.160000e-18 104.0
74 TraesCS1B01G316900 chr4D 87.742 155 15 4 1399 1551 481140957 481141109 6.730000e-41 178.0
75 TraesCS1B01G316900 chr4D 100.000 66 0 0 1637 1702 123377508 123377443 3.200000e-24 122.0
76 TraesCS1B01G316900 chr4D 100.000 66 0 0 1637 1702 123588295 123588230 3.200000e-24 122.0
77 TraesCS1B01G316900 chr4D 85.586 111 14 2 530 639 39337439 39337548 5.350000e-22 115.0
78 TraesCS1B01G316900 chr4D 84.685 111 17 0 530 640 294007819 294007709 6.920000e-21 111.0
79 TraesCS1B01G316900 chr4D 83.333 114 19 0 527 640 401068930 401069043 3.220000e-19 106.0
80 TraesCS1B01G316900 chr4D 96.610 59 2 0 2088 2146 123588237 123588179 5.390000e-17 99.0
81 TraesCS1B01G316900 chr4D 82.301 113 18 2 531 642 460670599 460670488 1.940000e-16 97.1
82 TraesCS1B01G316900 chr4D 85.556 90 11 2 554 642 15240933 15240845 2.510000e-15 93.5
83 TraesCS1B01G316900 chr4D 81.579 114 19 2 530 642 473774792 473774680 2.510000e-15 93.5
84 TraesCS1B01G316900 chr4B 87.742 155 15 4 1399 1551 609490385 609490537 6.730000e-41 178.0
85 TraesCS1B01G316900 chr5D 80.663 181 35 0 462 642 524591156 524590976 8.830000e-30 141.0
86 TraesCS1B01G316900 chr5D 84.211 114 16 2 530 642 347390203 347390091 2.490000e-20 110.0
87 TraesCS1B01G316900 chr5D 84.211 114 16 2 530 642 353956656 353956768 2.490000e-20 110.0
88 TraesCS1B01G316900 chr5D 83.333 114 17 2 530 642 201821618 201821730 1.160000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G316900 chr1B 541401409 541403777 2368 True 4375.000000 4375 100.000000 1 2369 1 chr1B.!!$R2 2368
1 TraesCS1B01G316900 chr1B 619096758 619098057 1299 True 484.133333 1295 92.283333 468 1637 3 chr1B.!!$R3 1169
2 TraesCS1B01G316900 chr5B 493287088 493288404 1316 True 514.233333 1402 92.171000 462 1637 3 chr5B.!!$R1 1175
3 TraesCS1B01G316900 chr2D 69242020 69243450 1430 False 508.600000 900 91.236667 461 1637 3 chr2D.!!$F2 1176
4 TraesCS1B01G316900 chr7D 266893931 266895138 1207 False 365.433333 614 92.171333 462 1637 3 chr7D.!!$F1 1175
5 TraesCS1B01G316900 chr1D 403184147 403185178 1031 True 242.000000 337 94.661000 1 462 3 chr1D.!!$R2 461
6 TraesCS1B01G316900 chr1A 498401494 498404990 3496 True 273.500000 279 88.512000 1 459 2 chr1A.!!$R1 458

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
356 400 0.035534 TGCATGCCATACACGAAGGT 60.036 50.0 16.68 0.0 0.0 3.5 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2312 5237 0.035317 ATGACGCTCAACTGCCTCAA 59.965 50.0 0.0 0.0 33.28 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 89 4.140900 ACCCTAGCTCCTAGAAATAGCAGA 60.141 45.833 0.00 0.00 38.75 4.26
98 101 2.298158 AATAGCAGAGCCGACACCCG 62.298 60.000 0.00 0.00 38.18 5.28
134 137 3.118592 CCCATTTCTCTCTCCCACTGTAC 60.119 52.174 0.00 0.00 0.00 2.90
137 140 2.110901 TCTCTCTCCCACTGTACGAC 57.889 55.000 0.00 0.00 0.00 4.34
277 321 0.682209 GCAGTCATCCACAAGGGCAT 60.682 55.000 0.00 0.00 36.21 4.40
285 329 3.650950 ACAAGGGCATGCCGGAGT 61.651 61.111 29.90 23.08 36.85 3.85
291 335 1.373497 GGCATGCCGGAGTAGATCG 60.373 63.158 23.48 0.00 0.00 3.69
292 336 2.024319 GCATGCCGGAGTAGATCGC 61.024 63.158 5.05 0.00 0.00 4.58
326 370 0.163788 GCAAACGACATCACCGACTG 59.836 55.000 0.00 0.00 0.00 3.51
343 387 1.703438 CTGCCTTCGACTCTGCATGC 61.703 60.000 11.82 11.82 32.53 4.06
355 399 0.659427 CTGCATGCCATACACGAAGG 59.341 55.000 16.68 0.00 0.00 3.46
356 400 0.035534 TGCATGCCATACACGAAGGT 60.036 50.000 16.68 0.00 0.00 3.50
413 987 2.034221 GACCAGTGCTTCCACCCC 59.966 66.667 0.00 0.00 43.09 4.95
422 996 3.172106 TTCCACCCCCGCTGTTGA 61.172 61.111 0.00 0.00 0.00 3.18
427 1001 2.231380 ACCCCCGCTGTTGAATCCT 61.231 57.895 0.00 0.00 0.00 3.24
448 1022 0.968901 TTGCCGACGAGGTCCATAGT 60.969 55.000 0.00 0.00 43.70 2.12
482 1056 1.008538 CGAGTTTGGTTGCCTGCAC 60.009 57.895 0.00 0.00 0.00 4.57
567 1174 1.268992 TACCGTTGGGCCTGCATAGT 61.269 55.000 4.53 0.00 36.48 2.12
633 1240 3.121944 CGAATCAACAGTTTCTCACGAGG 59.878 47.826 0.00 0.00 0.00 4.63
736 1459 2.437895 TCTGGATCTCGTCGGCGT 60.438 61.111 10.18 0.00 39.49 5.68
740 1463 2.506217 GATCTCGTCGGCGTTGCA 60.506 61.111 10.18 0.00 39.49 4.08
841 1564 2.879233 ATGACCGGCGTCCTTGTGT 61.879 57.895 6.01 0.00 38.32 3.72
1013 2189 1.028330 CATGACATGGTGGCGCTCTT 61.028 55.000 7.64 0.00 0.00 2.85
1107 2283 4.849329 GCCGGATTCGCGTCGTCT 62.849 66.667 5.05 0.00 34.56 4.18
1200 3032 3.317430 ACGACGTCTACTTCAAGGAGTTT 59.683 43.478 14.70 0.00 0.00 2.66
1251 3117 3.891586 GACGCTGTTCGAGTCGCCA 62.892 63.158 7.92 6.12 41.67 5.69
1370 3389 0.461961 AGCTCCGTGCAAGGATAGAC 59.538 55.000 22.12 11.66 45.94 2.59
1420 3439 3.148279 GACGGCGTGGAGGAGGAT 61.148 66.667 21.19 0.00 0.00 3.24
1437 3456 3.529341 ATGCGTGTCCGGACAGCAA 62.529 57.895 39.96 30.23 43.28 3.91
1568 4389 2.683465 GGGGATCCCAAGCAGAGCA 61.683 63.158 32.07 0.00 44.65 4.26
1569 4390 1.452833 GGGATCCCAAGCAGAGCAC 60.453 63.158 26.95 0.00 35.81 4.40
1584 4405 2.281070 CACAGCAGCTTCCACGGT 60.281 61.111 0.00 0.00 0.00 4.83
1591 4412 1.004918 AGCTTCCACGGTCGGAAAG 60.005 57.895 11.41 8.08 44.42 2.62
1595 4416 1.469335 TTCCACGGTCGGAAAGAGCT 61.469 55.000 8.85 0.00 42.16 4.09
1644 4569 3.928070 AGGGGGTCCTCTTTGGTAA 57.072 52.632 0.00 0.00 39.80 2.85
1645 4570 2.378308 AGGGGGTCCTCTTTGGTAAT 57.622 50.000 0.00 0.00 39.80 1.89
1646 4571 3.519370 AGGGGGTCCTCTTTGGTAATA 57.481 47.619 0.00 0.00 39.80 0.98
1647 4572 3.394645 AGGGGGTCCTCTTTGGTAATAG 58.605 50.000 0.00 0.00 39.80 1.73
1648 4573 2.158652 GGGGGTCCTCTTTGGTAATAGC 60.159 54.545 0.00 0.00 37.07 2.97
1649 4574 2.778270 GGGGTCCTCTTTGGTAATAGCT 59.222 50.000 0.00 0.00 37.07 3.32
1650 4575 3.202373 GGGGTCCTCTTTGGTAATAGCTT 59.798 47.826 0.00 0.00 37.07 3.74
1651 4576 4.325109 GGGGTCCTCTTTGGTAATAGCTTT 60.325 45.833 0.00 0.00 37.07 3.51
1652 4577 5.104235 GGGGTCCTCTTTGGTAATAGCTTTA 60.104 44.000 0.00 0.00 37.07 1.85
1653 4578 6.420638 GGGTCCTCTTTGGTAATAGCTTTAA 58.579 40.000 0.00 0.00 37.07 1.52
1654 4579 6.888088 GGGTCCTCTTTGGTAATAGCTTTAAA 59.112 38.462 0.00 0.00 37.07 1.52
1655 4580 7.148120 GGGTCCTCTTTGGTAATAGCTTTAAAC 60.148 40.741 0.00 0.00 37.07 2.01
1656 4581 7.392393 GGTCCTCTTTGGTAATAGCTTTAAACA 59.608 37.037 0.00 0.00 37.07 2.83
1657 4582 8.957466 GTCCTCTTTGGTAATAGCTTTAAACAT 58.043 33.333 0.00 0.00 37.07 2.71
1679 4604 9.474313 AACATAACATTTAGAACACATATGGGT 57.526 29.630 4.28 4.28 0.00 4.51
1680 4605 9.120538 ACATAACATTTAGAACACATATGGGTC 57.879 33.333 11.91 6.11 0.00 4.46
1681 4606 9.342308 CATAACATTTAGAACACATATGGGTCT 57.658 33.333 11.91 13.18 0.00 3.85
1685 4610 9.998106 ACATTTAGAACACATATGGGTCTATAC 57.002 33.333 11.91 1.52 30.74 1.47
1688 4613 8.777578 TTAGAACACATATGGGTCTATACTGT 57.222 34.615 11.91 0.00 30.74 3.55
1689 4614 9.871175 TTAGAACACATATGGGTCTATACTGTA 57.129 33.333 11.91 0.00 30.74 2.74
1690 4615 8.410673 AGAACACATATGGGTCTATACTGTAG 57.589 38.462 11.91 0.00 0.00 2.74
1691 4616 7.451877 AGAACACATATGGGTCTATACTGTAGG 59.548 40.741 11.91 0.00 0.00 3.18
1692 4617 6.860034 ACACATATGGGTCTATACTGTAGGA 58.140 40.000 4.28 0.00 0.00 2.94
1693 4618 7.479579 ACACATATGGGTCTATACTGTAGGAT 58.520 38.462 4.28 0.00 0.00 3.24
1694 4619 8.621073 ACACATATGGGTCTATACTGTAGGATA 58.379 37.037 4.28 0.00 0.00 2.59
1695 4620 8.904834 CACATATGGGTCTATACTGTAGGATAC 58.095 40.741 7.80 0.00 43.42 2.24
1712 4637 4.825422 GGATACTATTAGTAAACCCGGGC 58.175 47.826 24.08 3.45 33.89 6.13
1713 4638 4.284234 GGATACTATTAGTAAACCCGGGCA 59.716 45.833 24.08 2.33 33.89 5.36
1714 4639 5.221702 GGATACTATTAGTAAACCCGGGCAA 60.222 44.000 24.08 2.33 33.89 4.52
1715 4640 4.573021 ACTATTAGTAAACCCGGGCAAA 57.427 40.909 24.08 1.86 0.00 3.68
1716 4641 4.264253 ACTATTAGTAAACCCGGGCAAAC 58.736 43.478 24.08 16.22 0.00 2.93
1717 4642 1.521580 TTAGTAAACCCGGGCAAACG 58.478 50.000 24.08 0.00 0.00 3.60
1718 4643 0.396060 TAGTAAACCCGGGCAAACGT 59.604 50.000 24.08 3.38 0.00 3.99
1719 4644 0.886043 AGTAAACCCGGGCAAACGTC 60.886 55.000 24.08 4.87 0.00 4.34
1720 4645 1.960250 TAAACCCGGGCAAACGTCG 60.960 57.895 24.08 0.00 0.00 5.12
1748 4673 4.413565 GGTTTCGGGCCGGGCTTA 62.414 66.667 28.80 13.48 0.00 3.09
1749 4674 2.124445 GTTTCGGGCCGGGCTTAT 60.124 61.111 28.80 0.00 0.00 1.73
1750 4675 1.146707 GTTTCGGGCCGGGCTTATA 59.853 57.895 28.80 8.63 0.00 0.98
1751 4676 0.464193 GTTTCGGGCCGGGCTTATAA 60.464 55.000 28.80 13.68 0.00 0.98
1752 4677 0.255318 TTTCGGGCCGGGCTTATAAA 59.745 50.000 28.80 18.44 0.00 1.40
1753 4678 0.255318 TTCGGGCCGGGCTTATAAAA 59.745 50.000 28.80 6.44 0.00 1.52
1754 4679 0.179040 TCGGGCCGGGCTTATAAAAG 60.179 55.000 28.80 9.10 35.68 2.27
1769 4694 7.954906 CTTATAAAAGCACGACCTTCATTTC 57.045 36.000 0.00 0.00 0.00 2.17
1770 4695 3.643159 AAAAGCACGACCTTCATTTCC 57.357 42.857 0.00 0.00 0.00 3.13
1771 4696 1.534729 AAGCACGACCTTCATTTCCC 58.465 50.000 0.00 0.00 0.00 3.97
1772 4697 0.400213 AGCACGACCTTCATTTCCCA 59.600 50.000 0.00 0.00 0.00 4.37
1773 4698 1.202879 AGCACGACCTTCATTTCCCAA 60.203 47.619 0.00 0.00 0.00 4.12
1774 4699 1.200020 GCACGACCTTCATTTCCCAAG 59.800 52.381 0.00 0.00 0.00 3.61
1775 4700 1.200020 CACGACCTTCATTTCCCAAGC 59.800 52.381 0.00 0.00 0.00 4.01
1776 4701 0.811281 CGACCTTCATTTCCCAAGCC 59.189 55.000 0.00 0.00 0.00 4.35
1777 4702 1.186200 GACCTTCATTTCCCAAGCCC 58.814 55.000 0.00 0.00 0.00 5.19
1778 4703 0.611896 ACCTTCATTTCCCAAGCCCG 60.612 55.000 0.00 0.00 0.00 6.13
1779 4704 0.323360 CCTTCATTTCCCAAGCCCGA 60.323 55.000 0.00 0.00 0.00 5.14
1780 4705 1.098050 CTTCATTTCCCAAGCCCGAG 58.902 55.000 0.00 0.00 0.00 4.63
1781 4706 0.965363 TTCATTTCCCAAGCCCGAGC 60.965 55.000 0.00 0.00 40.32 5.03
1782 4707 2.043953 ATTTCCCAAGCCCGAGCC 60.044 61.111 0.00 0.00 41.25 4.70
1783 4708 3.662117 ATTTCCCAAGCCCGAGCCC 62.662 63.158 0.00 0.00 41.25 5.19
1802 4727 3.417601 GCCCGAAGCCCGAAATAC 58.582 61.111 0.00 0.00 41.76 1.89
1803 4728 1.153229 GCCCGAAGCCCGAAATACT 60.153 57.895 0.00 0.00 41.76 2.12
1804 4729 1.158484 GCCCGAAGCCCGAAATACTC 61.158 60.000 0.00 0.00 41.76 2.59
1805 4730 0.532196 CCCGAAGCCCGAAATACTCC 60.532 60.000 0.00 0.00 41.76 3.85
1806 4731 0.532196 CCGAAGCCCGAAATACTCCC 60.532 60.000 0.00 0.00 41.76 4.30
1807 4732 0.464452 CGAAGCCCGAAATACTCCCT 59.536 55.000 0.00 0.00 41.76 4.20
1808 4733 1.806623 CGAAGCCCGAAATACTCCCTG 60.807 57.143 0.00 0.00 41.76 4.45
1809 4734 1.209747 GAAGCCCGAAATACTCCCTGT 59.790 52.381 0.00 0.00 0.00 4.00
1810 4735 1.286248 AGCCCGAAATACTCCCTGTT 58.714 50.000 0.00 0.00 0.00 3.16
1811 4736 1.633945 AGCCCGAAATACTCCCTGTTT 59.366 47.619 0.00 0.00 0.00 2.83
1812 4737 2.041216 AGCCCGAAATACTCCCTGTTTT 59.959 45.455 0.00 0.00 0.00 2.43
1813 4738 2.823747 GCCCGAAATACTCCCTGTTTTT 59.176 45.455 0.00 0.00 33.61 1.94
1814 4739 4.011698 GCCCGAAATACTCCCTGTTTTTA 58.988 43.478 0.00 0.00 31.65 1.52
1815 4740 4.460034 GCCCGAAATACTCCCTGTTTTTAA 59.540 41.667 0.00 0.00 31.65 1.52
1816 4741 5.392703 GCCCGAAATACTCCCTGTTTTTAAG 60.393 44.000 0.00 0.00 31.65 1.85
1817 4742 5.392703 CCCGAAATACTCCCTGTTTTTAAGC 60.393 44.000 0.00 0.00 31.65 3.09
1818 4743 5.392703 CCGAAATACTCCCTGTTTTTAAGCC 60.393 44.000 0.00 0.00 31.65 4.35
1819 4744 5.392703 CGAAATACTCCCTGTTTTTAAGCCC 60.393 44.000 0.00 0.00 31.65 5.19
1820 4745 1.905637 ACTCCCTGTTTTTAAGCCCG 58.094 50.000 0.00 0.00 0.00 6.13
1821 4746 1.422402 ACTCCCTGTTTTTAAGCCCGA 59.578 47.619 0.00 0.00 0.00 5.14
1822 4747 2.084546 CTCCCTGTTTTTAAGCCCGAG 58.915 52.381 0.00 0.00 0.00 4.63
1823 4748 0.526211 CCCTGTTTTTAAGCCCGAGC 59.474 55.000 0.00 0.00 40.32 5.03
1824 4749 0.526211 CCTGTTTTTAAGCCCGAGCC 59.474 55.000 0.00 0.00 41.25 4.70
1825 4750 1.534729 CTGTTTTTAAGCCCGAGCCT 58.465 50.000 0.00 0.00 41.25 4.58
1826 4751 1.200020 CTGTTTTTAAGCCCGAGCCTG 59.800 52.381 0.00 0.00 41.25 4.85
1827 4752 0.526211 GTTTTTAAGCCCGAGCCTGG 59.474 55.000 0.00 0.00 41.25 4.45
1834 4759 4.479993 CCCGAGCCTGGCCTGAAG 62.480 72.222 16.57 2.26 0.00 3.02
1835 4760 3.710722 CCGAGCCTGGCCTGAAGT 61.711 66.667 16.57 0.00 0.00 3.01
1836 4761 2.125350 CGAGCCTGGCCTGAAGTC 60.125 66.667 16.57 4.03 0.00 3.01
1837 4762 2.947532 CGAGCCTGGCCTGAAGTCA 61.948 63.158 16.57 0.00 0.00 3.41
1838 4763 1.376466 GAGCCTGGCCTGAAGTCAA 59.624 57.895 16.57 0.00 0.00 3.18
1839 4764 0.676151 GAGCCTGGCCTGAAGTCAAG 60.676 60.000 16.57 0.00 0.00 3.02
1840 4765 2.338785 GCCTGGCCTGAAGTCAAGC 61.339 63.158 11.88 0.00 32.73 4.01
1843 4768 2.747855 GGCCTGAAGTCAAGCCCG 60.748 66.667 9.44 0.00 45.44 6.13
1844 4769 2.347490 GCCTGAAGTCAAGCCCGA 59.653 61.111 0.00 0.00 0.00 5.14
1845 4770 1.302511 GCCTGAAGTCAAGCCCGAA 60.303 57.895 0.00 0.00 0.00 4.30
1846 4771 1.301677 GCCTGAAGTCAAGCCCGAAG 61.302 60.000 0.00 0.00 0.00 3.79
1847 4772 1.301677 CCTGAAGTCAAGCCCGAAGC 61.302 60.000 0.00 0.00 44.25 3.86
1848 4773 1.301677 CTGAAGTCAAGCCCGAAGCC 61.302 60.000 0.00 0.00 45.47 4.35
1849 4774 2.034221 AAGTCAAGCCCGAAGCCC 59.966 61.111 0.00 0.00 45.47 5.19
1850 4775 3.901797 AAGTCAAGCCCGAAGCCCG 62.902 63.158 0.00 0.00 45.47 6.13
1851 4776 4.388499 GTCAAGCCCGAAGCCCGA 62.388 66.667 0.00 0.00 45.47 5.14
1852 4777 3.632080 TCAAGCCCGAAGCCCGAA 61.632 61.111 0.00 0.00 45.47 4.30
1853 4778 2.671619 CAAGCCCGAAGCCCGAAA 60.672 61.111 0.00 0.00 45.47 3.46
1854 4779 2.359975 AAGCCCGAAGCCCGAAAG 60.360 61.111 0.00 0.00 45.47 2.62
1858 4783 4.715523 CCGAAGCCCGAAAGCCCA 62.716 66.667 0.00 0.00 41.76 5.36
1859 4784 3.127533 CGAAGCCCGAAAGCCCAG 61.128 66.667 0.00 0.00 41.76 4.45
1860 4785 3.443925 GAAGCCCGAAAGCCCAGC 61.444 66.667 0.00 0.00 0.00 4.85
1865 4790 4.715523 CCGAAAGCCCAGCCCGAA 62.716 66.667 0.00 0.00 0.00 4.30
1866 4791 3.431725 CGAAAGCCCAGCCCGAAC 61.432 66.667 0.00 0.00 0.00 3.95
1867 4792 3.431725 GAAAGCCCAGCCCGAACG 61.432 66.667 0.00 0.00 0.00 3.95
1875 4800 3.836151 AGCCCGAACGCTGTTTTT 58.164 50.000 0.00 0.00 37.82 1.94
1896 4821 4.424430 CGTACGCACGTGCAAGCC 62.424 66.667 37.03 21.00 43.31 4.35
1897 4822 4.084888 GTACGCACGTGCAAGCCC 62.085 66.667 37.03 17.44 42.21 5.19
1916 4841 4.069232 GCCCGAAGCCCAAAAGCC 62.069 66.667 0.00 0.00 34.35 4.35
1917 4842 3.381983 CCCGAAGCCCAAAAGCCC 61.382 66.667 0.00 0.00 0.00 5.19
1918 4843 3.747976 CCGAAGCCCAAAAGCCCG 61.748 66.667 0.00 0.00 0.00 6.13
1919 4844 2.983592 CGAAGCCCAAAAGCCCGT 60.984 61.111 0.00 0.00 0.00 5.28
1920 4845 2.962569 GAAGCCCAAAAGCCCGTC 59.037 61.111 0.00 0.00 0.00 4.79
1921 4846 2.600470 AAGCCCAAAAGCCCGTCC 60.600 61.111 0.00 0.00 0.00 4.79
1922 4847 4.678743 AGCCCAAAAGCCCGTCCC 62.679 66.667 0.00 0.00 0.00 4.46
1924 4849 4.338710 CCCAAAAGCCCGTCCCGA 62.339 66.667 0.00 0.00 0.00 5.14
1925 4850 2.281900 CCAAAAGCCCGTCCCGAA 60.282 61.111 0.00 0.00 0.00 4.30
1926 4851 1.899534 CCAAAAGCCCGTCCCGAAA 60.900 57.895 0.00 0.00 0.00 3.46
1927 4852 1.248101 CCAAAAGCCCGTCCCGAAAT 61.248 55.000 0.00 0.00 0.00 2.17
1928 4853 1.455248 CAAAAGCCCGTCCCGAAATA 58.545 50.000 0.00 0.00 0.00 1.40
1929 4854 1.131693 CAAAAGCCCGTCCCGAAATAC 59.868 52.381 0.00 0.00 0.00 1.89
1930 4855 0.325602 AAAGCCCGTCCCGAAATACA 59.674 50.000 0.00 0.00 0.00 2.29
1931 4856 0.544697 AAGCCCGTCCCGAAATACAT 59.455 50.000 0.00 0.00 0.00 2.29
1932 4857 1.416243 AGCCCGTCCCGAAATACATA 58.584 50.000 0.00 0.00 0.00 2.29
1933 4858 1.764134 AGCCCGTCCCGAAATACATAA 59.236 47.619 0.00 0.00 0.00 1.90
1934 4859 2.171027 AGCCCGTCCCGAAATACATAAA 59.829 45.455 0.00 0.00 0.00 1.40
1935 4860 2.944349 GCCCGTCCCGAAATACATAAAA 59.056 45.455 0.00 0.00 0.00 1.52
1936 4861 3.377798 GCCCGTCCCGAAATACATAAAAA 59.622 43.478 0.00 0.00 0.00 1.94
1951 4876 2.276869 AAAAATGAAGCCCGAGCCC 58.723 52.632 0.00 0.00 41.25 5.19
1952 4877 1.595093 AAAAATGAAGCCCGAGCCCG 61.595 55.000 0.00 0.00 41.25 6.13
1962 4887 3.458163 CGAGCCCGGCCTGAACTA 61.458 66.667 5.55 0.00 0.00 2.24
1963 4888 2.797278 CGAGCCCGGCCTGAACTAT 61.797 63.158 5.55 0.00 0.00 2.12
1964 4889 1.069935 GAGCCCGGCCTGAACTATC 59.930 63.158 5.55 0.00 0.00 2.08
1965 4890 1.383248 AGCCCGGCCTGAACTATCT 60.383 57.895 5.55 0.00 0.00 1.98
1966 4891 0.983378 AGCCCGGCCTGAACTATCTT 60.983 55.000 5.55 0.00 0.00 2.40
1967 4892 0.533085 GCCCGGCCTGAACTATCTTC 60.533 60.000 0.00 0.00 0.00 2.87
1968 4893 0.106894 CCCGGCCTGAACTATCTTCC 59.893 60.000 0.00 0.00 0.00 3.46
1969 4894 0.249489 CCGGCCTGAACTATCTTCCG 60.249 60.000 0.00 0.00 34.52 4.30
1970 4895 0.249489 CGGCCTGAACTATCTTCCGG 60.249 60.000 0.00 0.00 32.65 5.14
1971 4896 0.106894 GGCCTGAACTATCTTCCGGG 59.893 60.000 0.00 0.00 0.00 5.73
1972 4897 0.533085 GCCTGAACTATCTTCCGGGC 60.533 60.000 0.00 0.00 32.44 6.13
1973 4898 1.123928 CCTGAACTATCTTCCGGGCT 58.876 55.000 0.00 0.00 0.00 5.19
1974 4899 1.202580 CCTGAACTATCTTCCGGGCTG 60.203 57.143 0.00 0.00 0.00 4.85
1975 4900 0.178068 TGAACTATCTTCCGGGCTGC 59.822 55.000 0.00 0.00 0.00 5.25
1976 4901 0.178068 GAACTATCTTCCGGGCTGCA 59.822 55.000 0.00 0.00 0.00 4.41
1977 4902 0.618458 AACTATCTTCCGGGCTGCAA 59.382 50.000 0.00 0.00 0.00 4.08
1978 4903 0.618458 ACTATCTTCCGGGCTGCAAA 59.382 50.000 0.00 0.00 0.00 3.68
1979 4904 1.004277 ACTATCTTCCGGGCTGCAAAA 59.996 47.619 0.00 0.00 0.00 2.44
1980 4905 1.672881 CTATCTTCCGGGCTGCAAAAG 59.327 52.381 0.00 0.00 0.00 2.27
1981 4906 0.251341 ATCTTCCGGGCTGCAAAAGT 60.251 50.000 0.00 0.00 0.00 2.66
1982 4907 0.398696 TCTTCCGGGCTGCAAAAGTA 59.601 50.000 0.00 0.00 0.00 2.24
1983 4908 0.804989 CTTCCGGGCTGCAAAAGTAG 59.195 55.000 0.00 0.00 0.00 2.57
1984 4909 0.608035 TTCCGGGCTGCAAAAGTAGG 60.608 55.000 0.00 0.00 0.00 3.18
1985 4910 2.700773 CCGGGCTGCAAAAGTAGGC 61.701 63.158 0.50 0.00 38.62 3.93
1987 4912 3.288484 GGCTGCAAAAGTAGGCCC 58.712 61.111 0.00 0.00 37.12 5.80
1988 4913 2.700773 GGCTGCAAAAGTAGGCCCG 61.701 63.158 0.00 0.00 37.12 6.13
1989 4914 1.674322 GCTGCAAAAGTAGGCCCGA 60.674 57.895 0.00 0.00 0.00 5.14
1990 4915 1.648467 GCTGCAAAAGTAGGCCCGAG 61.648 60.000 0.00 0.00 0.00 4.63
1991 4916 1.648467 CTGCAAAAGTAGGCCCGAGC 61.648 60.000 0.00 0.00 38.76 5.03
2086 5011 4.724501 TGCCCATGCCCGCGTTTA 62.725 61.111 4.92 0.00 36.33 2.01
2087 5012 3.444805 GCCCATGCCCGCGTTTAA 61.445 61.111 4.92 0.00 0.00 1.52
2088 5013 2.487892 CCCATGCCCGCGTTTAAC 59.512 61.111 4.92 0.00 0.00 2.01
2089 5014 2.043980 CCCATGCCCGCGTTTAACT 61.044 57.895 4.92 0.00 0.00 2.24
2090 5015 0.745128 CCCATGCCCGCGTTTAACTA 60.745 55.000 4.92 0.00 0.00 2.24
2091 5016 1.305201 CCATGCCCGCGTTTAACTAT 58.695 50.000 4.92 0.00 0.00 2.12
2092 5017 1.673920 CCATGCCCGCGTTTAACTATT 59.326 47.619 4.92 0.00 0.00 1.73
2093 5018 2.873472 CCATGCCCGCGTTTAACTATTA 59.127 45.455 4.92 0.00 0.00 0.98
2094 5019 3.059188 CCATGCCCGCGTTTAACTATTAG 60.059 47.826 4.92 0.00 0.00 1.73
2095 5020 1.935199 TGCCCGCGTTTAACTATTAGC 59.065 47.619 4.92 0.00 0.00 3.09
2096 5021 1.935199 GCCCGCGTTTAACTATTAGCA 59.065 47.619 4.92 0.00 0.00 3.49
2097 5022 2.546789 GCCCGCGTTTAACTATTAGCAT 59.453 45.455 4.92 0.00 0.00 3.79
2098 5023 3.742369 GCCCGCGTTTAACTATTAGCATA 59.258 43.478 4.92 0.00 0.00 3.14
2099 5024 4.376717 GCCCGCGTTTAACTATTAGCATAC 60.377 45.833 4.92 0.00 0.00 2.39
2100 5025 4.986659 CCCGCGTTTAACTATTAGCATACT 59.013 41.667 4.92 0.00 0.00 2.12
2101 5026 5.464389 CCCGCGTTTAACTATTAGCATACTT 59.536 40.000 4.92 0.00 0.00 2.24
2102 5027 6.642131 CCCGCGTTTAACTATTAGCATACTTA 59.358 38.462 4.92 0.00 0.00 2.24
2103 5028 7.169645 CCCGCGTTTAACTATTAGCATACTTAA 59.830 37.037 4.92 0.00 0.00 1.85
2104 5029 8.706035 CCGCGTTTAACTATTAGCATACTTAAT 58.294 33.333 4.92 0.00 0.00 1.40
2105 5030 9.723299 CGCGTTTAACTATTAGCATACTTAATC 57.277 33.333 0.00 0.00 0.00 1.75
2112 5037 9.627123 AACTATTAGCATACTTAATCTTTGGCA 57.373 29.630 0.00 0.00 0.00 4.92
2113 5038 9.277783 ACTATTAGCATACTTAATCTTTGGCAG 57.722 33.333 0.00 0.00 0.00 4.85
2114 5039 9.277783 CTATTAGCATACTTAATCTTTGGCAGT 57.722 33.333 0.00 0.00 0.00 4.40
2116 5041 8.662781 TTAGCATACTTAATCTTTGGCAGTAG 57.337 34.615 0.00 0.00 0.00 2.57
2117 5042 6.889198 AGCATACTTAATCTTTGGCAGTAGA 58.111 36.000 4.21 4.21 0.00 2.59
2118 5043 6.989169 AGCATACTTAATCTTTGGCAGTAGAG 59.011 38.462 7.36 0.00 0.00 2.43
2119 5044 6.986817 GCATACTTAATCTTTGGCAGTAGAGA 59.013 38.462 7.36 2.01 0.00 3.10
2120 5045 7.495934 GCATACTTAATCTTTGGCAGTAGAGAA 59.504 37.037 7.36 4.13 0.00 2.87
2121 5046 9.383519 CATACTTAATCTTTGGCAGTAGAGAAA 57.616 33.333 7.36 4.03 0.00 2.52
2123 5048 8.273780 ACTTAATCTTTGGCAGTAGAGAAATG 57.726 34.615 7.36 2.07 0.00 2.32
2124 5049 8.103305 ACTTAATCTTTGGCAGTAGAGAAATGA 58.897 33.333 7.36 0.00 0.00 2.57
2125 5050 6.749923 AATCTTTGGCAGTAGAGAAATGAC 57.250 37.500 7.36 0.00 0.00 3.06
2126 5051 5.227569 TCTTTGGCAGTAGAGAAATGACA 57.772 39.130 0.00 0.00 0.00 3.58
2127 5052 4.997395 TCTTTGGCAGTAGAGAAATGACAC 59.003 41.667 0.00 0.00 29.85 3.67
2128 5053 3.334583 TGGCAGTAGAGAAATGACACC 57.665 47.619 0.00 0.00 0.00 4.16
2129 5054 2.637382 TGGCAGTAGAGAAATGACACCA 59.363 45.455 0.00 0.00 0.00 4.17
2130 5055 3.264193 TGGCAGTAGAGAAATGACACCAT 59.736 43.478 0.00 0.00 33.66 3.55
2131 5056 4.469586 TGGCAGTAGAGAAATGACACCATA 59.530 41.667 0.00 0.00 31.59 2.74
2132 5057 5.053145 GGCAGTAGAGAAATGACACCATAG 58.947 45.833 0.00 0.00 31.59 2.23
2133 5058 5.395768 GGCAGTAGAGAAATGACACCATAGT 60.396 44.000 0.00 0.00 31.59 2.12
2134 5059 6.109359 GCAGTAGAGAAATGACACCATAGTT 58.891 40.000 0.00 0.00 31.59 2.24
2135 5060 6.595716 GCAGTAGAGAAATGACACCATAGTTT 59.404 38.462 0.00 0.00 31.59 2.66
2136 5061 7.764443 GCAGTAGAGAAATGACACCATAGTTTA 59.236 37.037 0.00 0.00 31.59 2.01
2137 5062 9.307121 CAGTAGAGAAATGACACCATAGTTTAG 57.693 37.037 0.00 0.00 31.59 1.85
2138 5063 7.982354 AGTAGAGAAATGACACCATAGTTTAGC 59.018 37.037 0.00 0.00 31.59 3.09
2139 5064 6.116126 AGAGAAATGACACCATAGTTTAGCC 58.884 40.000 0.00 0.00 31.59 3.93
2140 5065 6.067217 AGAAATGACACCATAGTTTAGCCT 57.933 37.500 0.00 0.00 31.59 4.58
2141 5066 5.882557 AGAAATGACACCATAGTTTAGCCTG 59.117 40.000 0.00 0.00 31.59 4.85
2142 5067 3.627395 TGACACCATAGTTTAGCCTGG 57.373 47.619 0.00 0.00 34.84 4.45
2143 5068 3.178046 TGACACCATAGTTTAGCCTGGA 58.822 45.455 0.00 0.00 32.92 3.86
2144 5069 3.055385 TGACACCATAGTTTAGCCTGGAC 60.055 47.826 0.00 0.00 32.92 4.02
2145 5070 2.910319 ACACCATAGTTTAGCCTGGACA 59.090 45.455 0.00 0.00 32.92 4.02
2146 5071 3.523564 ACACCATAGTTTAGCCTGGACAT 59.476 43.478 0.00 0.00 32.92 3.06
2147 5072 4.719773 ACACCATAGTTTAGCCTGGACATA 59.280 41.667 0.00 0.00 32.92 2.29
2148 5073 5.190925 ACACCATAGTTTAGCCTGGACATAA 59.809 40.000 0.00 0.00 32.92 1.90
2149 5074 6.126478 ACACCATAGTTTAGCCTGGACATAAT 60.126 38.462 0.00 0.00 32.92 1.28
2150 5075 6.428159 CACCATAGTTTAGCCTGGACATAATC 59.572 42.308 0.00 0.00 32.92 1.75
2165 5090 7.506328 GGACATAATCCTTACCATTGGTAAC 57.494 40.000 21.76 10.36 45.22 2.50
2166 5091 7.287810 GGACATAATCCTTACCATTGGTAACT 58.712 38.462 21.76 10.71 45.22 2.24
2167 5092 7.228706 GGACATAATCCTTACCATTGGTAACTG 59.771 40.741 21.76 16.06 45.22 3.16
2168 5093 7.639378 ACATAATCCTTACCATTGGTAACTGT 58.361 34.615 21.76 14.87 42.44 3.55
2169 5094 8.774183 ACATAATCCTTACCATTGGTAACTGTA 58.226 33.333 21.76 12.77 42.44 2.74
2170 5095 9.621629 CATAATCCTTACCATTGGTAACTGTAA 57.378 33.333 21.76 9.95 42.44 2.41
2175 5100 9.841295 TCCTTACCATTGGTAACTGTAATTATC 57.159 33.333 21.76 0.00 42.44 1.75
2176 5101 9.621629 CCTTACCATTGGTAACTGTAATTATCA 57.378 33.333 21.76 0.31 42.44 2.15
2179 5104 7.996385 ACCATTGGTAACTGTAATTATCAAGC 58.004 34.615 6.54 0.00 38.29 4.01
2180 5105 7.068226 ACCATTGGTAACTGTAATTATCAAGCC 59.932 37.037 6.54 0.00 38.29 4.35
2181 5106 7.285401 CCATTGGTAACTGTAATTATCAAGCCT 59.715 37.037 0.00 0.00 38.29 4.58
2182 5107 9.337396 CATTGGTAACTGTAATTATCAAGCCTA 57.663 33.333 0.00 0.00 38.29 3.93
2183 5108 9.914834 ATTGGTAACTGTAATTATCAAGCCTAA 57.085 29.630 0.00 0.00 38.29 2.69
2184 5109 9.914834 TTGGTAACTGTAATTATCAAGCCTAAT 57.085 29.630 0.00 0.00 31.62 1.73
2185 5110 9.914834 TGGTAACTGTAATTATCAAGCCTAATT 57.085 29.630 0.00 0.00 33.76 1.40
2199 5124 7.826690 TCAAGCCTAATTTTTCACTGAATACC 58.173 34.615 0.00 0.00 0.00 2.73
2200 5125 6.436843 AGCCTAATTTTTCACTGAATACCG 57.563 37.500 0.00 0.00 0.00 4.02
2201 5126 6.177610 AGCCTAATTTTTCACTGAATACCGA 58.822 36.000 0.00 0.00 0.00 4.69
2202 5127 6.316390 AGCCTAATTTTTCACTGAATACCGAG 59.684 38.462 0.00 0.00 0.00 4.63
2203 5128 6.093633 GCCTAATTTTTCACTGAATACCGAGT 59.906 38.462 0.00 0.00 0.00 4.18
2204 5129 7.279313 GCCTAATTTTTCACTGAATACCGAGTA 59.721 37.037 0.00 0.00 0.00 2.59
2205 5130 9.158233 CCTAATTTTTCACTGAATACCGAGTAA 57.842 33.333 0.00 0.00 0.00 2.24
2208 5133 6.476243 TTTTCACTGAATACCGAGTAAAGC 57.524 37.500 0.00 0.00 0.00 3.51
2209 5134 4.794278 TCACTGAATACCGAGTAAAGCA 57.206 40.909 0.00 0.00 0.00 3.91
2210 5135 5.142061 TCACTGAATACCGAGTAAAGCAA 57.858 39.130 0.00 0.00 0.00 3.91
2211 5136 5.168569 TCACTGAATACCGAGTAAAGCAAG 58.831 41.667 0.00 0.00 0.00 4.01
2212 5137 3.933332 ACTGAATACCGAGTAAAGCAAGC 59.067 43.478 0.00 0.00 0.00 4.01
2213 5138 3.932710 CTGAATACCGAGTAAAGCAAGCA 59.067 43.478 0.00 0.00 0.00 3.91
2214 5139 4.320023 TGAATACCGAGTAAAGCAAGCAA 58.680 39.130 0.00 0.00 0.00 3.91
2215 5140 4.391830 TGAATACCGAGTAAAGCAAGCAAG 59.608 41.667 0.00 0.00 0.00 4.01
2216 5141 2.543777 ACCGAGTAAAGCAAGCAAGA 57.456 45.000 0.00 0.00 0.00 3.02
2217 5142 2.846193 ACCGAGTAAAGCAAGCAAGAA 58.154 42.857 0.00 0.00 0.00 2.52
2218 5143 3.211045 ACCGAGTAAAGCAAGCAAGAAA 58.789 40.909 0.00 0.00 0.00 2.52
2219 5144 3.251004 ACCGAGTAAAGCAAGCAAGAAAG 59.749 43.478 0.00 0.00 0.00 2.62
2220 5145 3.498397 CCGAGTAAAGCAAGCAAGAAAGA 59.502 43.478 0.00 0.00 0.00 2.52
2221 5146 4.377841 CCGAGTAAAGCAAGCAAGAAAGAG 60.378 45.833 0.00 0.00 0.00 2.85
2222 5147 4.377841 CGAGTAAAGCAAGCAAGAAAGAGG 60.378 45.833 0.00 0.00 0.00 3.69
2223 5148 3.823304 AGTAAAGCAAGCAAGAAAGAGGG 59.177 43.478 0.00 0.00 0.00 4.30
2224 5149 2.664402 AAGCAAGCAAGAAAGAGGGA 57.336 45.000 0.00 0.00 0.00 4.20
2225 5150 2.664402 AGCAAGCAAGAAAGAGGGAA 57.336 45.000 0.00 0.00 0.00 3.97
2226 5151 2.512705 AGCAAGCAAGAAAGAGGGAAG 58.487 47.619 0.00 0.00 0.00 3.46
2227 5152 1.543358 GCAAGCAAGAAAGAGGGAAGG 59.457 52.381 0.00 0.00 0.00 3.46
2228 5153 2.165998 CAAGCAAGAAAGAGGGAAGGG 58.834 52.381 0.00 0.00 0.00 3.95
2229 5154 0.701147 AGCAAGAAAGAGGGAAGGGG 59.299 55.000 0.00 0.00 0.00 4.79
2230 5155 0.967887 GCAAGAAAGAGGGAAGGGGC 60.968 60.000 0.00 0.00 0.00 5.80
2231 5156 0.405585 CAAGAAAGAGGGAAGGGGCA 59.594 55.000 0.00 0.00 0.00 5.36
2232 5157 0.701147 AAGAAAGAGGGAAGGGGCAG 59.299 55.000 0.00 0.00 0.00 4.85
2233 5158 1.379176 GAAAGAGGGAAGGGGCAGC 60.379 63.158 0.00 0.00 0.00 5.25
2234 5159 1.854507 AAAGAGGGAAGGGGCAGCT 60.855 57.895 0.00 0.00 0.00 4.24
2235 5160 2.147433 AAAGAGGGAAGGGGCAGCTG 62.147 60.000 10.11 10.11 0.00 4.24
2236 5161 3.334054 GAGGGAAGGGGCAGCTGT 61.334 66.667 16.64 0.00 0.00 4.40
2237 5162 2.860971 AGGGAAGGGGCAGCTGTT 60.861 61.111 16.64 0.51 0.00 3.16
2238 5163 2.118294 GGGAAGGGGCAGCTGTTT 59.882 61.111 16.64 5.14 0.00 2.83
2239 5164 1.533994 GGGAAGGGGCAGCTGTTTT 60.534 57.895 16.64 4.77 0.00 2.43
2240 5165 1.536073 GGGAAGGGGCAGCTGTTTTC 61.536 60.000 16.64 13.07 0.00 2.29
2241 5166 1.581447 GAAGGGGCAGCTGTTTTCG 59.419 57.895 16.64 0.00 0.00 3.46
2242 5167 0.889186 GAAGGGGCAGCTGTTTTCGA 60.889 55.000 16.64 0.00 0.00 3.71
2243 5168 0.890996 AAGGGGCAGCTGTTTTCGAG 60.891 55.000 16.64 0.00 0.00 4.04
2244 5169 2.563427 GGGCAGCTGTTTTCGAGC 59.437 61.111 16.64 0.00 36.65 5.03
2246 5171 0.673644 GGGCAGCTGTTTTCGAGCTA 60.674 55.000 16.64 0.00 45.24 3.32
2247 5172 0.723981 GGCAGCTGTTTTCGAGCTAG 59.276 55.000 16.64 0.00 45.24 3.42
2248 5173 0.723981 GCAGCTGTTTTCGAGCTAGG 59.276 55.000 16.64 0.00 45.24 3.02
2249 5174 0.723981 CAGCTGTTTTCGAGCTAGGC 59.276 55.000 5.25 0.00 45.24 3.93
2250 5175 0.610687 AGCTGTTTTCGAGCTAGGCT 59.389 50.000 0.00 0.00 45.17 4.58
2258 5183 4.511838 GAGCTAGGCTCGATCCCT 57.488 61.111 0.62 5.85 45.85 4.20
2259 5184 2.740121 GAGCTAGGCTCGATCCCTT 58.260 57.895 9.73 0.00 45.85 3.95
2260 5185 1.044611 GAGCTAGGCTCGATCCCTTT 58.955 55.000 9.73 0.00 45.85 3.11
2261 5186 2.240279 GAGCTAGGCTCGATCCCTTTA 58.760 52.381 9.73 0.00 45.85 1.85
2262 5187 2.829120 GAGCTAGGCTCGATCCCTTTAT 59.171 50.000 9.73 0.00 45.85 1.40
2263 5188 2.829120 AGCTAGGCTCGATCCCTTTATC 59.171 50.000 9.73 0.00 30.62 1.75
2264 5189 2.563179 GCTAGGCTCGATCCCTTTATCA 59.437 50.000 9.73 0.00 33.88 2.15
2265 5190 3.196685 GCTAGGCTCGATCCCTTTATCAT 59.803 47.826 9.73 0.00 33.88 2.45
2266 5191 3.971245 AGGCTCGATCCCTTTATCATC 57.029 47.619 0.62 0.00 0.00 2.92
2267 5192 2.569404 AGGCTCGATCCCTTTATCATCC 59.431 50.000 0.62 0.00 0.00 3.51
2268 5193 2.303022 GGCTCGATCCCTTTATCATCCA 59.697 50.000 0.00 0.00 0.00 3.41
2269 5194 3.330267 GCTCGATCCCTTTATCATCCAC 58.670 50.000 0.00 0.00 0.00 4.02
2270 5195 3.007398 GCTCGATCCCTTTATCATCCACT 59.993 47.826 0.00 0.00 0.00 4.00
2271 5196 4.503991 GCTCGATCCCTTTATCATCCACTT 60.504 45.833 0.00 0.00 0.00 3.16
2272 5197 5.215252 TCGATCCCTTTATCATCCACTTC 57.785 43.478 0.00 0.00 0.00 3.01
2273 5198 4.901849 TCGATCCCTTTATCATCCACTTCT 59.098 41.667 0.00 0.00 0.00 2.85
2274 5199 5.011125 TCGATCCCTTTATCATCCACTTCTC 59.989 44.000 0.00 0.00 0.00 2.87
2275 5200 4.672587 TCCCTTTATCATCCACTTCTCG 57.327 45.455 0.00 0.00 0.00 4.04
2276 5201 3.134458 CCCTTTATCATCCACTTCTCGC 58.866 50.000 0.00 0.00 0.00 5.03
2277 5202 3.181461 CCCTTTATCATCCACTTCTCGCT 60.181 47.826 0.00 0.00 0.00 4.93
2278 5203 4.039245 CCCTTTATCATCCACTTCTCGCTA 59.961 45.833 0.00 0.00 0.00 4.26
2279 5204 5.279708 CCCTTTATCATCCACTTCTCGCTAT 60.280 44.000 0.00 0.00 0.00 2.97
2280 5205 6.226787 CCTTTATCATCCACTTCTCGCTATT 58.773 40.000 0.00 0.00 0.00 1.73
2281 5206 6.708054 CCTTTATCATCCACTTCTCGCTATTT 59.292 38.462 0.00 0.00 0.00 1.40
2282 5207 7.307632 CCTTTATCATCCACTTCTCGCTATTTG 60.308 40.741 0.00 0.00 0.00 2.32
2283 5208 4.471904 TCATCCACTTCTCGCTATTTGT 57.528 40.909 0.00 0.00 0.00 2.83
2284 5209 5.592104 TCATCCACTTCTCGCTATTTGTA 57.408 39.130 0.00 0.00 0.00 2.41
2285 5210 5.972935 TCATCCACTTCTCGCTATTTGTAA 58.027 37.500 0.00 0.00 0.00 2.41
2286 5211 6.582636 TCATCCACTTCTCGCTATTTGTAAT 58.417 36.000 0.00 0.00 0.00 1.89
2287 5212 7.047891 TCATCCACTTCTCGCTATTTGTAATT 58.952 34.615 0.00 0.00 0.00 1.40
2288 5213 6.903883 TCCACTTCTCGCTATTTGTAATTC 57.096 37.500 0.00 0.00 0.00 2.17
2289 5214 6.640518 TCCACTTCTCGCTATTTGTAATTCT 58.359 36.000 0.00 0.00 0.00 2.40
2290 5215 7.778083 TCCACTTCTCGCTATTTGTAATTCTA 58.222 34.615 0.00 0.00 0.00 2.10
2291 5216 7.705325 TCCACTTCTCGCTATTTGTAATTCTAC 59.295 37.037 0.00 0.00 0.00 2.59
2292 5217 7.707035 CCACTTCTCGCTATTTGTAATTCTACT 59.293 37.037 0.00 0.00 0.00 2.57
2293 5218 9.088512 CACTTCTCGCTATTTGTAATTCTACTT 57.911 33.333 0.00 0.00 0.00 2.24
2294 5219 9.088512 ACTTCTCGCTATTTGTAATTCTACTTG 57.911 33.333 0.00 0.00 0.00 3.16
2295 5220 9.302345 CTTCTCGCTATTTGTAATTCTACTTGA 57.698 33.333 0.00 0.00 0.00 3.02
2296 5221 9.647797 TTCTCGCTATTTGTAATTCTACTTGAA 57.352 29.630 0.00 0.00 39.24 2.69
2297 5222 9.817809 TCTCGCTATTTGTAATTCTACTTGAAT 57.182 29.630 0.00 0.00 46.49 2.57
2316 5241 9.495572 ACTTGAATTAGTTCTTCCTAAGTTGAG 57.504 33.333 0.00 0.00 35.33 3.02
2317 5242 8.848474 TTGAATTAGTTCTTCCTAAGTTGAGG 57.152 34.615 0.00 0.00 35.23 3.86
2318 5243 6.879458 TGAATTAGTTCTTCCTAAGTTGAGGC 59.121 38.462 0.00 0.00 34.55 4.70
2319 5244 5.818678 TTAGTTCTTCCTAAGTTGAGGCA 57.181 39.130 0.00 0.00 36.45 4.75
2320 5245 4.278975 AGTTCTTCCTAAGTTGAGGCAG 57.721 45.455 0.00 0.00 36.45 4.85
2321 5246 3.648545 AGTTCTTCCTAAGTTGAGGCAGT 59.351 43.478 0.00 0.00 36.45 4.40
2322 5247 4.103311 AGTTCTTCCTAAGTTGAGGCAGTT 59.897 41.667 0.00 0.00 36.45 3.16
2323 5248 4.008074 TCTTCCTAAGTTGAGGCAGTTG 57.992 45.455 0.00 0.00 36.45 3.16
2324 5249 3.646162 TCTTCCTAAGTTGAGGCAGTTGA 59.354 43.478 0.00 0.00 36.45 3.18
2325 5250 3.685139 TCCTAAGTTGAGGCAGTTGAG 57.315 47.619 0.00 0.00 36.45 3.02
2326 5251 2.079925 CCTAAGTTGAGGCAGTTGAGC 58.920 52.381 0.00 0.00 0.00 4.26
2327 5252 1.728971 CTAAGTTGAGGCAGTTGAGCG 59.271 52.381 0.00 0.00 34.64 5.03
2328 5253 0.179045 AAGTTGAGGCAGTTGAGCGT 60.179 50.000 0.00 0.00 34.64 5.07
2329 5254 0.601311 AGTTGAGGCAGTTGAGCGTC 60.601 55.000 0.00 0.00 46.50 5.19
2331 5256 4.606071 GAGGCAGTTGAGCGTCAT 57.394 55.556 4.03 0.00 45.83 3.06
2332 5257 2.378028 GAGGCAGTTGAGCGTCATC 58.622 57.895 4.03 0.00 45.83 2.92
2333 5258 0.390340 GAGGCAGTTGAGCGTCATCA 60.390 55.000 4.03 0.00 45.83 3.07
2334 5259 0.251354 AGGCAGTTGAGCGTCATCAT 59.749 50.000 0.00 0.00 34.64 2.45
2335 5260 0.654683 GGCAGTTGAGCGTCATCATC 59.345 55.000 0.00 0.00 34.64 2.92
2336 5261 0.299895 GCAGTTGAGCGTCATCATCG 59.700 55.000 0.00 0.00 0.00 3.84
2337 5262 0.926155 CAGTTGAGCGTCATCATCGG 59.074 55.000 0.00 0.00 0.00 4.18
2338 5263 0.532573 AGTTGAGCGTCATCATCGGT 59.467 50.000 0.00 0.00 41.60 4.69
2339 5264 1.066858 AGTTGAGCGTCATCATCGGTT 60.067 47.619 0.00 0.00 39.08 4.44
2340 5265 2.165641 AGTTGAGCGTCATCATCGGTTA 59.834 45.455 0.00 0.00 39.08 2.85
2341 5266 2.927477 GTTGAGCGTCATCATCGGTTAA 59.073 45.455 0.00 0.00 39.08 2.01
2342 5267 2.809446 TGAGCGTCATCATCGGTTAAG 58.191 47.619 0.00 0.00 39.08 1.85
2343 5268 2.128035 GAGCGTCATCATCGGTTAAGG 58.872 52.381 0.00 0.00 39.08 2.69
2344 5269 1.754803 AGCGTCATCATCGGTTAAGGA 59.245 47.619 0.00 0.00 35.53 3.36
2345 5270 1.859080 GCGTCATCATCGGTTAAGGAC 59.141 52.381 0.00 0.00 0.00 3.85
2346 5271 2.737359 GCGTCATCATCGGTTAAGGACA 60.737 50.000 0.00 0.00 0.00 4.02
2347 5272 3.717707 CGTCATCATCGGTTAAGGACAT 58.282 45.455 0.00 0.00 0.00 3.06
2348 5273 3.490896 CGTCATCATCGGTTAAGGACATG 59.509 47.826 0.00 0.00 0.00 3.21
2349 5274 4.693283 GTCATCATCGGTTAAGGACATGA 58.307 43.478 0.00 0.00 0.00 3.07
2350 5275 5.300752 GTCATCATCGGTTAAGGACATGAT 58.699 41.667 0.00 0.00 33.82 2.45
2351 5276 5.178252 GTCATCATCGGTTAAGGACATGATG 59.822 44.000 12.14 12.14 43.61 3.07
2352 5277 5.070313 TCATCATCGGTTAAGGACATGATGA 59.930 40.000 15.60 15.60 45.88 2.92
2353 5278 4.948847 TCATCGGTTAAGGACATGATGAG 58.051 43.478 0.00 0.00 42.15 2.90
2354 5279 4.405680 TCATCGGTTAAGGACATGATGAGT 59.594 41.667 0.00 0.00 42.15 3.41
2355 5280 5.596772 TCATCGGTTAAGGACATGATGAGTA 59.403 40.000 0.00 0.00 42.15 2.59
2356 5281 5.515797 TCGGTTAAGGACATGATGAGTAG 57.484 43.478 0.00 0.00 0.00 2.57
2357 5282 5.198207 TCGGTTAAGGACATGATGAGTAGA 58.802 41.667 0.00 0.00 0.00 2.59
2358 5283 5.299531 TCGGTTAAGGACATGATGAGTAGAG 59.700 44.000 0.00 0.00 0.00 2.43
2359 5284 5.508153 CGGTTAAGGACATGATGAGTAGAGG 60.508 48.000 0.00 0.00 0.00 3.69
2360 5285 5.598830 GGTTAAGGACATGATGAGTAGAGGA 59.401 44.000 0.00 0.00 0.00 3.71
2361 5286 6.268847 GGTTAAGGACATGATGAGTAGAGGAT 59.731 42.308 0.00 0.00 0.00 3.24
2362 5287 5.804944 AAGGACATGATGAGTAGAGGATG 57.195 43.478 0.00 0.00 0.00 3.51
2363 5288 3.577848 AGGACATGATGAGTAGAGGATGC 59.422 47.826 0.00 0.00 0.00 3.91
2364 5289 3.577848 GGACATGATGAGTAGAGGATGCT 59.422 47.826 0.00 0.00 0.00 3.79
2365 5290 4.321899 GGACATGATGAGTAGAGGATGCTC 60.322 50.000 6.03 6.03 40.79 4.26
2366 5291 3.577848 ACATGATGAGTAGAGGATGCTCC 59.422 47.826 11.06 0.00 39.73 4.70
2367 5292 2.234143 TGATGAGTAGAGGATGCTCCG 58.766 52.381 11.06 0.00 42.75 4.63
2368 5293 1.543802 GATGAGTAGAGGATGCTCCGG 59.456 57.143 11.06 0.00 42.75 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 53 1.739067 CTAGGGTTTTCCTTGAGGCG 58.261 55.000 0.00 0.00 45.47 5.52
57 59 4.076175 TCTAGGAGCTAGGGTTTTCCTT 57.924 45.455 0.00 0.00 45.47 3.36
137 140 1.375396 TTGGACGACATGAAGGCCG 60.375 57.895 0.00 0.00 0.00 6.13
203 206 7.893124 AACTATCTAAATACCTTCCAGTCGA 57.107 36.000 0.00 0.00 0.00 4.20
285 329 0.106708 GATTGTGCCTGGGCGATCTA 59.893 55.000 7.14 0.00 45.51 1.98
326 370 2.467826 GGCATGCAGAGTCGAAGGC 61.468 63.158 21.36 0.00 0.00 4.35
343 387 0.616371 TTCCCCACCTTCGTGTATGG 59.384 55.000 0.00 0.00 38.41 2.74
364 409 1.541233 GCTACTTGGGATCATCGGTGG 60.541 57.143 0.00 0.00 0.00 4.61
413 987 0.109597 GCAACAGGATTCAACAGCGG 60.110 55.000 0.00 0.00 0.00 5.52
422 996 1.079127 CCTCGTCGGCAACAGGATT 60.079 57.895 0.00 0.00 31.50 3.01
427 1001 1.252215 TATGGACCTCGTCGGCAACA 61.252 55.000 0.00 0.00 35.61 3.33
482 1056 2.901042 GGGTCTGGTTAGGCTCGG 59.099 66.667 0.00 0.00 0.00 4.63
510 1084 3.330701 ACAGCCCACCTCTAAAAAGATGA 59.669 43.478 0.00 0.00 0.00 2.92
610 1217 3.972403 TCGTGAGAAACTGTTGATTCGA 58.028 40.909 0.00 0.00 37.03 3.71
617 1224 1.541233 CCTGCCTCGTGAGAAACTGTT 60.541 52.381 0.00 0.00 41.32 3.16
633 1240 2.030262 CATCTCTAGCGGGCCTGC 59.970 66.667 30.15 30.15 0.00 4.85
736 1459 4.269523 AGCCAGGCGTCCTTGCAA 62.270 61.111 19.11 0.00 43.67 4.08
841 1564 2.359850 GTCGCATCCACTTGGCCA 60.360 61.111 0.00 0.00 34.44 5.36
996 2172 1.375908 GAAGAGCGCCACCATGTCA 60.376 57.895 2.29 0.00 0.00 3.58
1251 3117 1.956170 CACAAGCCGTTGCGTCTCT 60.956 57.895 0.00 0.00 44.33 3.10
1370 3389 2.678934 TTCCGTCCTCCACCTCCG 60.679 66.667 0.00 0.00 0.00 4.63
1420 3439 4.228567 TTGCTGTCCGGACACGCA 62.229 61.111 36.59 36.59 40.74 5.24
1464 3734 4.760047 ACACGGTCATGGCGCTCC 62.760 66.667 7.64 1.72 0.00 4.70
1568 4389 2.031163 GACCGTGGAAGCTGCTGT 59.969 61.111 1.35 0.00 0.00 4.40
1569 4390 3.114616 CGACCGTGGAAGCTGCTG 61.115 66.667 1.35 0.00 0.00 4.41
1653 4578 9.474313 ACCCATATGTGTTCTAAATGTTATGTT 57.526 29.630 1.24 0.00 0.00 2.71
1654 4579 9.120538 GACCCATATGTGTTCTAAATGTTATGT 57.879 33.333 1.24 0.00 0.00 2.29
1655 4580 9.342308 AGACCCATATGTGTTCTAAATGTTATG 57.658 33.333 1.24 0.00 0.00 1.90
1659 4584 9.998106 GTATAGACCCATATGTGTTCTAAATGT 57.002 33.333 1.24 0.00 0.00 2.71
1662 4587 9.209048 ACAGTATAGACCCATATGTGTTCTAAA 57.791 33.333 1.24 0.00 0.00 1.85
1663 4588 8.777578 ACAGTATAGACCCATATGTGTTCTAA 57.222 34.615 1.24 0.00 0.00 2.10
1664 4589 9.516546 CTACAGTATAGACCCATATGTGTTCTA 57.483 37.037 1.24 5.03 0.00 2.10
1665 4590 7.451877 CCTACAGTATAGACCCATATGTGTTCT 59.548 40.741 1.24 2.96 0.00 3.01
1666 4591 7.450634 TCCTACAGTATAGACCCATATGTGTTC 59.549 40.741 1.24 0.00 0.00 3.18
1667 4592 7.302948 TCCTACAGTATAGACCCATATGTGTT 58.697 38.462 1.24 0.00 0.00 3.32
1668 4593 6.860034 TCCTACAGTATAGACCCATATGTGT 58.140 40.000 1.24 0.00 0.00 3.72
1669 4594 7.962995 ATCCTACAGTATAGACCCATATGTG 57.037 40.000 1.24 0.00 0.00 3.21
1670 4595 8.847816 AGTATCCTACAGTATAGACCCATATGT 58.152 37.037 1.24 0.00 0.00 2.29
1683 4608 9.507329 CGGGTTTACTAATAGTATCCTACAGTA 57.493 37.037 16.04 0.00 29.64 2.74
1684 4609 7.449704 CCGGGTTTACTAATAGTATCCTACAGT 59.550 40.741 16.04 0.00 29.64 3.55
1685 4610 7.094032 CCCGGGTTTACTAATAGTATCCTACAG 60.094 44.444 14.18 9.23 29.64 2.74
1686 4611 6.721208 CCCGGGTTTACTAATAGTATCCTACA 59.279 42.308 14.18 0.00 29.64 2.74
1687 4612 6.350528 GCCCGGGTTTACTAATAGTATCCTAC 60.351 46.154 24.63 0.00 29.64 3.18
1688 4613 5.716703 GCCCGGGTTTACTAATAGTATCCTA 59.283 44.000 24.63 0.00 29.64 2.94
1689 4614 4.529769 GCCCGGGTTTACTAATAGTATCCT 59.470 45.833 24.63 0.00 29.64 3.24
1690 4615 4.284234 TGCCCGGGTTTACTAATAGTATCC 59.716 45.833 24.63 7.18 29.64 2.59
1691 4616 5.473066 TGCCCGGGTTTACTAATAGTATC 57.527 43.478 24.63 0.00 29.64 2.24
1692 4617 5.892524 TTGCCCGGGTTTACTAATAGTAT 57.107 39.130 24.63 0.00 29.64 2.12
1693 4618 5.427378 GTTTGCCCGGGTTTACTAATAGTA 58.573 41.667 24.63 0.00 0.00 1.82
1694 4619 4.264253 GTTTGCCCGGGTTTACTAATAGT 58.736 43.478 24.63 0.00 0.00 2.12
1695 4620 3.310501 CGTTTGCCCGGGTTTACTAATAG 59.689 47.826 24.63 3.61 0.00 1.73
1696 4621 3.269178 CGTTTGCCCGGGTTTACTAATA 58.731 45.455 24.63 0.00 0.00 0.98
1697 4622 2.086094 CGTTTGCCCGGGTTTACTAAT 58.914 47.619 24.63 0.00 0.00 1.73
1698 4623 1.202746 ACGTTTGCCCGGGTTTACTAA 60.203 47.619 24.63 5.42 0.00 2.24
1699 4624 0.396060 ACGTTTGCCCGGGTTTACTA 59.604 50.000 24.63 0.00 0.00 1.82
1700 4625 0.886043 GACGTTTGCCCGGGTTTACT 60.886 55.000 24.63 7.40 0.00 2.24
1701 4626 1.575922 GACGTTTGCCCGGGTTTAC 59.424 57.895 24.63 15.94 0.00 2.01
1702 4627 1.960250 CGACGTTTGCCCGGGTTTA 60.960 57.895 24.63 6.20 0.00 2.01
1703 4628 3.281395 CGACGTTTGCCCGGGTTT 61.281 61.111 24.63 0.00 0.00 3.27
1731 4656 2.328155 TATAAGCCCGGCCCGAAACC 62.328 60.000 3.71 0.00 0.00 3.27
1732 4657 0.464193 TTATAAGCCCGGCCCGAAAC 60.464 55.000 3.71 0.00 0.00 2.78
1733 4658 0.255318 TTTATAAGCCCGGCCCGAAA 59.745 50.000 3.71 0.00 0.00 3.46
1734 4659 0.255318 TTTTATAAGCCCGGCCCGAA 59.745 50.000 3.71 0.00 0.00 4.30
1735 4660 0.179040 CTTTTATAAGCCCGGCCCGA 60.179 55.000 3.71 0.00 0.00 5.14
1736 4661 2.327228 CTTTTATAAGCCCGGCCCG 58.673 57.895 5.55 0.00 0.00 6.13
1745 4670 6.967199 GGAAATGAAGGTCGTGCTTTTATAAG 59.033 38.462 0.00 0.00 34.36 1.73
1746 4671 6.127842 GGGAAATGAAGGTCGTGCTTTTATAA 60.128 38.462 0.00 0.00 0.00 0.98
1747 4672 5.355910 GGGAAATGAAGGTCGTGCTTTTATA 59.644 40.000 0.00 0.00 0.00 0.98
1748 4673 4.157840 GGGAAATGAAGGTCGTGCTTTTAT 59.842 41.667 0.00 0.00 0.00 1.40
1749 4674 3.504520 GGGAAATGAAGGTCGTGCTTTTA 59.495 43.478 0.00 0.00 0.00 1.52
1750 4675 2.296190 GGGAAATGAAGGTCGTGCTTTT 59.704 45.455 0.00 0.00 0.00 2.27
1751 4676 1.886542 GGGAAATGAAGGTCGTGCTTT 59.113 47.619 0.00 0.00 0.00 3.51
1752 4677 1.202879 TGGGAAATGAAGGTCGTGCTT 60.203 47.619 0.00 0.00 0.00 3.91
1753 4678 0.400213 TGGGAAATGAAGGTCGTGCT 59.600 50.000 0.00 0.00 0.00 4.40
1754 4679 1.200020 CTTGGGAAATGAAGGTCGTGC 59.800 52.381 0.00 0.00 0.00 5.34
1755 4680 1.200020 GCTTGGGAAATGAAGGTCGTG 59.800 52.381 0.00 0.00 0.00 4.35
1756 4681 1.534729 GCTTGGGAAATGAAGGTCGT 58.465 50.000 0.00 0.00 0.00 4.34
1757 4682 0.811281 GGCTTGGGAAATGAAGGTCG 59.189 55.000 0.00 0.00 0.00 4.79
1758 4683 1.186200 GGGCTTGGGAAATGAAGGTC 58.814 55.000 0.00 0.00 0.00 3.85
1759 4684 0.611896 CGGGCTTGGGAAATGAAGGT 60.612 55.000 0.00 0.00 0.00 3.50
1760 4685 0.323360 TCGGGCTTGGGAAATGAAGG 60.323 55.000 0.00 0.00 0.00 3.46
1761 4686 1.098050 CTCGGGCTTGGGAAATGAAG 58.902 55.000 0.00 0.00 0.00 3.02
1762 4687 0.965363 GCTCGGGCTTGGGAAATGAA 60.965 55.000 0.00 0.00 35.22 2.57
1763 4688 1.378514 GCTCGGGCTTGGGAAATGA 60.379 57.895 0.00 0.00 35.22 2.57
1764 4689 2.418083 GGCTCGGGCTTGGGAAATG 61.418 63.158 7.48 0.00 38.73 2.32
1765 4690 2.043953 GGCTCGGGCTTGGGAAAT 60.044 61.111 7.48 0.00 38.73 2.17
1766 4691 4.360405 GGGCTCGGGCTTGGGAAA 62.360 66.667 7.48 0.00 38.73 3.13
1785 4710 1.153229 AGTATTTCGGGCTTCGGGC 60.153 57.895 0.75 0.00 39.77 6.13
1786 4711 0.532196 GGAGTATTTCGGGCTTCGGG 60.532 60.000 0.75 0.00 39.77 5.14
1787 4712 0.532196 GGGAGTATTTCGGGCTTCGG 60.532 60.000 0.75 0.00 39.77 4.30
1788 4713 0.464452 AGGGAGTATTTCGGGCTTCG 59.536 55.000 0.00 0.00 40.90 3.79
1789 4714 1.209747 ACAGGGAGTATTTCGGGCTTC 59.790 52.381 0.00 0.00 0.00 3.86
1790 4715 1.286248 ACAGGGAGTATTTCGGGCTT 58.714 50.000 0.00 0.00 0.00 4.35
1791 4716 1.286248 AACAGGGAGTATTTCGGGCT 58.714 50.000 0.00 0.00 0.00 5.19
1792 4717 2.124277 AAACAGGGAGTATTTCGGGC 57.876 50.000 0.00 0.00 0.00 6.13
1793 4718 5.392703 GCTTAAAAACAGGGAGTATTTCGGG 60.393 44.000 0.00 0.00 0.00 5.14
1794 4719 5.392703 GGCTTAAAAACAGGGAGTATTTCGG 60.393 44.000 0.00 0.00 0.00 4.30
1795 4720 5.392703 GGGCTTAAAAACAGGGAGTATTTCG 60.393 44.000 0.00 0.00 0.00 3.46
1796 4721 5.392703 CGGGCTTAAAAACAGGGAGTATTTC 60.393 44.000 0.00 0.00 0.00 2.17
1797 4722 4.461431 CGGGCTTAAAAACAGGGAGTATTT 59.539 41.667 0.00 0.00 0.00 1.40
1798 4723 4.014406 CGGGCTTAAAAACAGGGAGTATT 58.986 43.478 0.00 0.00 0.00 1.89
1799 4724 3.264964 TCGGGCTTAAAAACAGGGAGTAT 59.735 43.478 0.00 0.00 0.00 2.12
1800 4725 2.638855 TCGGGCTTAAAAACAGGGAGTA 59.361 45.455 0.00 0.00 0.00 2.59
1801 4726 1.422402 TCGGGCTTAAAAACAGGGAGT 59.578 47.619 0.00 0.00 0.00 3.85
1802 4727 2.084546 CTCGGGCTTAAAAACAGGGAG 58.915 52.381 0.00 0.00 0.00 4.30
1803 4728 1.884928 GCTCGGGCTTAAAAACAGGGA 60.885 52.381 0.00 0.00 35.22 4.20
1804 4729 0.526211 GCTCGGGCTTAAAAACAGGG 59.474 55.000 0.00 0.00 35.22 4.45
1805 4730 0.526211 GGCTCGGGCTTAAAAACAGG 59.474 55.000 7.48 0.00 38.73 4.00
1806 4731 1.200020 CAGGCTCGGGCTTAAAAACAG 59.800 52.381 7.48 0.00 35.88 3.16
1807 4732 1.243902 CAGGCTCGGGCTTAAAAACA 58.756 50.000 7.48 0.00 35.88 2.83
1808 4733 0.526211 CCAGGCTCGGGCTTAAAAAC 59.474 55.000 7.48 0.00 35.88 2.43
1809 4734 2.955609 CCAGGCTCGGGCTTAAAAA 58.044 52.632 7.48 0.00 35.88 1.94
1810 4735 4.734652 CCAGGCTCGGGCTTAAAA 57.265 55.556 7.48 0.00 35.88 1.52
1817 4742 4.479993 CTTCAGGCCAGGCTCGGG 62.480 72.222 12.43 0.00 0.00 5.14
1818 4743 3.672295 GACTTCAGGCCAGGCTCGG 62.672 68.421 12.43 2.43 0.00 4.63
1819 4744 2.125350 GACTTCAGGCCAGGCTCG 60.125 66.667 12.43 2.50 0.00 5.03
1820 4745 0.676151 CTTGACTTCAGGCCAGGCTC 60.676 60.000 12.43 1.02 0.00 4.70
1821 4746 1.377994 CTTGACTTCAGGCCAGGCT 59.622 57.895 12.43 0.00 0.00 4.58
1822 4747 2.338785 GCTTGACTTCAGGCCAGGC 61.339 63.158 5.01 1.26 42.31 4.85
1823 4748 3.993535 GCTTGACTTCAGGCCAGG 58.006 61.111 5.01 0.00 42.31 4.45
1827 4752 1.301677 CTTCGGGCTTGACTTCAGGC 61.302 60.000 4.80 4.80 46.64 4.85
1828 4753 1.301677 GCTTCGGGCTTGACTTCAGG 61.302 60.000 0.00 0.00 38.06 3.86
1829 4754 1.301677 GGCTTCGGGCTTGACTTCAG 61.302 60.000 1.83 0.00 41.46 3.02
1830 4755 1.302511 GGCTTCGGGCTTGACTTCA 60.303 57.895 1.83 0.00 41.46 3.02
1831 4756 2.041115 GGGCTTCGGGCTTGACTTC 61.041 63.158 1.83 0.00 41.46 3.01
1832 4757 2.034221 GGGCTTCGGGCTTGACTT 59.966 61.111 1.83 0.00 41.46 3.01
1833 4758 4.394712 CGGGCTTCGGGCTTGACT 62.395 66.667 1.83 0.00 41.46 3.41
1834 4759 3.894547 TTCGGGCTTCGGGCTTGAC 62.895 63.158 1.83 0.00 41.46 3.18
1835 4760 3.185299 TTTCGGGCTTCGGGCTTGA 62.185 57.895 1.83 0.00 41.46 3.02
1836 4761 2.671619 TTTCGGGCTTCGGGCTTG 60.672 61.111 1.83 0.00 41.46 4.01
1837 4762 2.359975 CTTTCGGGCTTCGGGCTT 60.360 61.111 1.83 0.00 41.46 4.35
1841 4766 4.715523 TGGGCTTTCGGGCTTCGG 62.716 66.667 0.75 0.00 40.65 4.30
1842 4767 3.127533 CTGGGCTTTCGGGCTTCG 61.128 66.667 0.00 0.00 40.65 3.79
1843 4768 3.443925 GCTGGGCTTTCGGGCTTC 61.444 66.667 0.00 0.00 40.65 3.86
1848 4773 4.715523 TTCGGGCTGGGCTTTCGG 62.716 66.667 0.00 0.00 0.00 4.30
1849 4774 3.431725 GTTCGGGCTGGGCTTTCG 61.432 66.667 0.00 0.00 0.00 3.46
1850 4775 3.431725 CGTTCGGGCTGGGCTTTC 61.432 66.667 0.00 0.00 0.00 2.62
1858 4783 3.836151 AAAAACAGCGTTCGGGCT 58.164 50.000 0.00 0.00 46.13 5.19
1880 4805 4.084888 GGGCTTGCACGTGCGTAC 62.085 66.667 33.22 23.87 45.83 3.67
1899 4824 4.069232 GGCTTTTGGGCTTCGGGC 62.069 66.667 0.00 0.00 40.90 6.13
1900 4825 3.381983 GGGCTTTTGGGCTTCGGG 61.382 66.667 0.00 0.00 40.65 5.14
1901 4826 3.747976 CGGGCTTTTGGGCTTCGG 61.748 66.667 0.00 0.00 40.65 4.30
1902 4827 2.978018 GACGGGCTTTTGGGCTTCG 61.978 63.158 0.00 0.00 40.65 3.79
1903 4828 2.636412 GGACGGGCTTTTGGGCTTC 61.636 63.158 0.00 0.00 40.65 3.86
1904 4829 2.600470 GGACGGGCTTTTGGGCTT 60.600 61.111 0.00 0.00 40.65 4.35
1905 4830 4.678743 GGGACGGGCTTTTGGGCT 62.679 66.667 0.00 0.00 40.65 5.19
1933 4858 1.595093 CGGGCTCGGGCTTCATTTTT 61.595 55.000 7.48 0.00 38.73 1.94
1934 4859 2.046285 CGGGCTCGGGCTTCATTTT 61.046 57.895 7.48 0.00 38.73 1.82
1935 4860 2.438434 CGGGCTCGGGCTTCATTT 60.438 61.111 7.48 0.00 38.73 2.32
1945 4870 2.701163 GATAGTTCAGGCCGGGCTCG 62.701 65.000 30.43 22.69 0.00 5.03
1946 4871 1.069935 GATAGTTCAGGCCGGGCTC 59.930 63.158 30.43 17.76 0.00 4.70
1947 4872 0.983378 AAGATAGTTCAGGCCGGGCT 60.983 55.000 27.45 27.45 0.00 5.19
1948 4873 0.533085 GAAGATAGTTCAGGCCGGGC 60.533 60.000 22.67 22.67 0.00 6.13
1949 4874 0.106894 GGAAGATAGTTCAGGCCGGG 59.893 60.000 2.18 0.00 0.00 5.73
1950 4875 0.249489 CGGAAGATAGTTCAGGCCGG 60.249 60.000 0.00 0.00 32.12 6.13
1951 4876 0.249489 CCGGAAGATAGTTCAGGCCG 60.249 60.000 0.00 0.00 34.13 6.13
1952 4877 0.106894 CCCGGAAGATAGTTCAGGCC 59.893 60.000 0.73 0.00 33.32 5.19
1953 4878 0.533085 GCCCGGAAGATAGTTCAGGC 60.533 60.000 0.73 1.27 33.32 4.85
1954 4879 1.123928 AGCCCGGAAGATAGTTCAGG 58.876 55.000 0.73 0.00 34.24 3.86
1955 4880 1.808133 GCAGCCCGGAAGATAGTTCAG 60.808 57.143 0.73 0.00 0.00 3.02
1956 4881 0.178068 GCAGCCCGGAAGATAGTTCA 59.822 55.000 0.73 0.00 0.00 3.18
1957 4882 0.178068 TGCAGCCCGGAAGATAGTTC 59.822 55.000 0.73 0.00 0.00 3.01
1958 4883 0.618458 TTGCAGCCCGGAAGATAGTT 59.382 50.000 0.73 0.00 0.00 2.24
1959 4884 0.618458 TTTGCAGCCCGGAAGATAGT 59.382 50.000 0.73 0.00 0.00 2.12
1960 4885 1.672881 CTTTTGCAGCCCGGAAGATAG 59.327 52.381 0.73 0.00 0.00 2.08
1961 4886 1.004277 ACTTTTGCAGCCCGGAAGATA 59.996 47.619 0.73 0.00 0.00 1.98
1962 4887 0.251341 ACTTTTGCAGCCCGGAAGAT 60.251 50.000 0.73 0.00 0.00 2.40
1963 4888 0.398696 TACTTTTGCAGCCCGGAAGA 59.601 50.000 0.73 0.00 0.00 2.87
1964 4889 0.804989 CTACTTTTGCAGCCCGGAAG 59.195 55.000 0.73 0.00 0.00 3.46
1965 4890 0.608035 CCTACTTTTGCAGCCCGGAA 60.608 55.000 0.73 0.00 0.00 4.30
1966 4891 1.002624 CCTACTTTTGCAGCCCGGA 60.003 57.895 0.73 0.00 0.00 5.14
1967 4892 2.700773 GCCTACTTTTGCAGCCCGG 61.701 63.158 0.00 0.00 0.00 5.73
1968 4893 2.700773 GGCCTACTTTTGCAGCCCG 61.701 63.158 0.00 0.00 37.66 6.13
1969 4894 3.288484 GGCCTACTTTTGCAGCCC 58.712 61.111 0.00 0.00 37.66 5.19
1970 4895 2.700773 CGGGCCTACTTTTGCAGCC 61.701 63.158 0.84 2.37 43.09 4.85
1971 4896 1.648467 CTCGGGCCTACTTTTGCAGC 61.648 60.000 0.84 0.00 0.00 5.25
1972 4897 1.648467 GCTCGGGCCTACTTTTGCAG 61.648 60.000 0.84 0.00 0.00 4.41
1973 4898 1.674322 GCTCGGGCCTACTTTTGCA 60.674 57.895 0.84 0.00 0.00 4.08
1974 4899 3.188011 GCTCGGGCCTACTTTTGC 58.812 61.111 0.84 0.00 0.00 3.68
1991 4916 4.778143 CTTGACCTTCGGGCCGGG 62.778 72.222 27.98 22.57 39.10 5.73
1996 4921 3.702048 TCGGGCTTGACCTTCGGG 61.702 66.667 0.00 0.00 39.10 5.14
1997 4922 2.434359 GTCGGGCTTGACCTTCGG 60.434 66.667 0.00 0.00 39.10 4.30
2069 4994 4.724501 TAAACGCGGGCATGGGCA 62.725 61.111 12.47 0.00 43.71 5.36
2070 4995 3.444805 TTAAACGCGGGCATGGGC 61.445 61.111 12.47 0.00 40.13 5.36
2071 4996 0.745128 TAGTTAAACGCGGGCATGGG 60.745 55.000 12.47 0.00 0.00 4.00
2072 4997 1.305201 ATAGTTAAACGCGGGCATGG 58.695 50.000 12.47 0.00 0.00 3.66
2073 4998 3.606153 GCTAATAGTTAAACGCGGGCATG 60.606 47.826 12.47 0.00 0.00 4.06
2074 4999 2.546789 GCTAATAGTTAAACGCGGGCAT 59.453 45.455 12.47 0.00 0.00 4.40
2075 5000 1.935199 GCTAATAGTTAAACGCGGGCA 59.065 47.619 12.47 0.00 0.00 5.36
2076 5001 1.935199 TGCTAATAGTTAAACGCGGGC 59.065 47.619 12.47 0.00 0.00 6.13
2077 5002 4.986659 AGTATGCTAATAGTTAAACGCGGG 59.013 41.667 12.47 0.00 0.00 6.13
2078 5003 6.520792 AAGTATGCTAATAGTTAAACGCGG 57.479 37.500 12.47 0.00 31.38 6.46
2079 5004 9.723299 GATTAAGTATGCTAATAGTTAAACGCG 57.277 33.333 3.53 3.53 42.94 6.01
2086 5011 9.627123 TGCCAAAGATTAAGTATGCTAATAGTT 57.373 29.630 0.00 0.00 36.21 2.24
2087 5012 9.277783 CTGCCAAAGATTAAGTATGCTAATAGT 57.722 33.333 0.00 0.00 0.00 2.12
2088 5013 9.277783 ACTGCCAAAGATTAAGTATGCTAATAG 57.722 33.333 0.00 0.00 0.00 1.73
2090 5015 9.277783 CTACTGCCAAAGATTAAGTATGCTAAT 57.722 33.333 0.00 0.00 0.00 1.73
2091 5016 8.482943 TCTACTGCCAAAGATTAAGTATGCTAA 58.517 33.333 0.00 0.00 0.00 3.09
2092 5017 8.018537 TCTACTGCCAAAGATTAAGTATGCTA 57.981 34.615 0.00 0.00 0.00 3.49
2093 5018 6.889198 TCTACTGCCAAAGATTAAGTATGCT 58.111 36.000 0.00 0.00 0.00 3.79
2094 5019 6.986817 TCTCTACTGCCAAAGATTAAGTATGC 59.013 38.462 0.00 0.00 0.00 3.14
2095 5020 8.948631 TTCTCTACTGCCAAAGATTAAGTATG 57.051 34.615 0.00 0.00 0.00 2.39
2097 5022 9.383519 CATTTCTCTACTGCCAAAGATTAAGTA 57.616 33.333 0.00 0.00 0.00 2.24
2098 5023 8.103305 TCATTTCTCTACTGCCAAAGATTAAGT 58.897 33.333 0.00 0.00 0.00 2.24
2099 5024 8.394121 GTCATTTCTCTACTGCCAAAGATTAAG 58.606 37.037 0.00 0.00 0.00 1.85
2100 5025 7.882791 TGTCATTTCTCTACTGCCAAAGATTAA 59.117 33.333 0.00 0.00 0.00 1.40
2101 5026 7.334421 GTGTCATTTCTCTACTGCCAAAGATTA 59.666 37.037 0.00 0.00 0.00 1.75
2102 5027 6.150140 GTGTCATTTCTCTACTGCCAAAGATT 59.850 38.462 0.00 0.00 0.00 2.40
2103 5028 5.645497 GTGTCATTTCTCTACTGCCAAAGAT 59.355 40.000 0.00 0.00 0.00 2.40
2104 5029 4.997395 GTGTCATTTCTCTACTGCCAAAGA 59.003 41.667 0.00 0.00 0.00 2.52
2105 5030 4.154918 GGTGTCATTTCTCTACTGCCAAAG 59.845 45.833 0.00 0.00 0.00 2.77
2106 5031 4.072131 GGTGTCATTTCTCTACTGCCAAA 58.928 43.478 0.00 0.00 0.00 3.28
2107 5032 3.072330 TGGTGTCATTTCTCTACTGCCAA 59.928 43.478 0.00 0.00 0.00 4.52
2108 5033 2.637382 TGGTGTCATTTCTCTACTGCCA 59.363 45.455 0.00 0.00 0.00 4.92
2109 5034 3.334583 TGGTGTCATTTCTCTACTGCC 57.665 47.619 0.00 0.00 0.00 4.85
2110 5035 5.665459 ACTATGGTGTCATTTCTCTACTGC 58.335 41.667 0.00 0.00 34.96 4.40
2111 5036 9.307121 CTAAACTATGGTGTCATTTCTCTACTG 57.693 37.037 0.00 0.00 34.96 2.74
2112 5037 7.982354 GCTAAACTATGGTGTCATTTCTCTACT 59.018 37.037 0.00 0.00 34.96 2.57
2113 5038 7.224949 GGCTAAACTATGGTGTCATTTCTCTAC 59.775 40.741 0.00 0.00 34.96 2.59
2114 5039 7.125811 AGGCTAAACTATGGTGTCATTTCTCTA 59.874 37.037 0.00 0.00 34.96 2.43
2115 5040 6.069963 AGGCTAAACTATGGTGTCATTTCTCT 60.070 38.462 0.00 0.00 34.96 3.10
2116 5041 6.037610 CAGGCTAAACTATGGTGTCATTTCTC 59.962 42.308 0.00 0.00 34.96 2.87
2117 5042 5.882557 CAGGCTAAACTATGGTGTCATTTCT 59.117 40.000 0.00 0.00 34.96 2.52
2118 5043 5.066505 CCAGGCTAAACTATGGTGTCATTTC 59.933 44.000 0.00 0.00 34.96 2.17
2119 5044 4.949856 CCAGGCTAAACTATGGTGTCATTT 59.050 41.667 0.00 0.00 34.96 2.32
2120 5045 4.227300 TCCAGGCTAAACTATGGTGTCATT 59.773 41.667 0.00 0.00 34.96 2.57
2121 5046 3.780294 TCCAGGCTAAACTATGGTGTCAT 59.220 43.478 0.00 0.00 37.40 3.06
2122 5047 3.055385 GTCCAGGCTAAACTATGGTGTCA 60.055 47.826 0.00 0.00 34.32 3.58
2123 5048 3.055385 TGTCCAGGCTAAACTATGGTGTC 60.055 47.826 0.00 0.00 34.32 3.67
2124 5049 2.910319 TGTCCAGGCTAAACTATGGTGT 59.090 45.455 0.00 0.00 34.32 4.16
2125 5050 3.627395 TGTCCAGGCTAAACTATGGTG 57.373 47.619 0.00 0.00 34.32 4.17
2126 5051 5.968676 TTATGTCCAGGCTAAACTATGGT 57.031 39.130 0.00 0.00 34.32 3.55
2127 5052 5.940470 GGATTATGTCCAGGCTAAACTATGG 59.060 44.000 0.00 0.00 46.96 2.74
2137 5062 8.837828 ACCAATGGTAAGGATTATGTCCAGGC 62.838 46.154 1.52 0.00 41.45 4.85
2138 5063 5.399038 ACCAATGGTAAGGATTATGTCCAGG 60.399 44.000 1.52 0.00 41.45 4.45
2139 5064 5.694995 ACCAATGGTAAGGATTATGTCCAG 58.305 41.667 1.52 0.00 41.45 3.86
2140 5065 5.725551 ACCAATGGTAAGGATTATGTCCA 57.274 39.130 1.52 0.00 41.45 4.02
2153 5078 9.116067 GCTTGATAATTACAGTTACCAATGGTA 57.884 33.333 8.27 8.27 37.09 3.25
2154 5079 7.068226 GGCTTGATAATTACAGTTACCAATGGT 59.932 37.037 10.81 10.81 40.16 3.55
2155 5080 7.285401 AGGCTTGATAATTACAGTTACCAATGG 59.715 37.037 0.00 0.00 0.00 3.16
2156 5081 8.225603 AGGCTTGATAATTACAGTTACCAATG 57.774 34.615 0.00 0.00 0.00 2.82
2157 5082 9.914834 TTAGGCTTGATAATTACAGTTACCAAT 57.085 29.630 0.00 0.00 0.00 3.16
2158 5083 9.914834 ATTAGGCTTGATAATTACAGTTACCAA 57.085 29.630 0.00 0.00 0.00 3.67
2159 5084 9.914834 AATTAGGCTTGATAATTACAGTTACCA 57.085 29.630 0.00 0.00 32.42 3.25
2173 5098 8.470002 GGTATTCAGTGAAAAATTAGGCTTGAT 58.530 33.333 10.14 0.00 0.00 2.57
2174 5099 7.361713 CGGTATTCAGTGAAAAATTAGGCTTGA 60.362 37.037 10.14 0.00 0.00 3.02
2175 5100 6.747280 CGGTATTCAGTGAAAAATTAGGCTTG 59.253 38.462 10.14 0.00 0.00 4.01
2176 5101 6.657541 TCGGTATTCAGTGAAAAATTAGGCTT 59.342 34.615 10.14 0.00 0.00 4.35
2177 5102 6.177610 TCGGTATTCAGTGAAAAATTAGGCT 58.822 36.000 10.14 0.00 0.00 4.58
2178 5103 6.093633 ACTCGGTATTCAGTGAAAAATTAGGC 59.906 38.462 10.14 0.00 0.00 3.93
2179 5104 7.611213 ACTCGGTATTCAGTGAAAAATTAGG 57.389 36.000 10.14 1.19 0.00 2.69
2182 5107 8.021396 GCTTTACTCGGTATTCAGTGAAAAATT 58.979 33.333 10.14 0.00 0.00 1.82
2183 5108 7.174253 TGCTTTACTCGGTATTCAGTGAAAAAT 59.826 33.333 10.14 0.00 0.00 1.82
2184 5109 6.483974 TGCTTTACTCGGTATTCAGTGAAAAA 59.516 34.615 10.14 2.57 0.00 1.94
2185 5110 5.992829 TGCTTTACTCGGTATTCAGTGAAAA 59.007 36.000 10.14 0.00 0.00 2.29
2186 5111 5.543714 TGCTTTACTCGGTATTCAGTGAAA 58.456 37.500 10.14 0.00 0.00 2.69
2187 5112 5.142061 TGCTTTACTCGGTATTCAGTGAA 57.858 39.130 8.27 8.27 0.00 3.18
2188 5113 4.794278 TGCTTTACTCGGTATTCAGTGA 57.206 40.909 0.00 0.00 0.00 3.41
2189 5114 4.201724 GCTTGCTTTACTCGGTATTCAGTG 60.202 45.833 0.00 0.00 0.00 3.66
2190 5115 3.933332 GCTTGCTTTACTCGGTATTCAGT 59.067 43.478 0.00 0.00 0.00 3.41
2191 5116 3.932710 TGCTTGCTTTACTCGGTATTCAG 59.067 43.478 0.00 0.00 0.00 3.02
2192 5117 3.932822 TGCTTGCTTTACTCGGTATTCA 58.067 40.909 0.00 0.00 0.00 2.57
2193 5118 4.630069 TCTTGCTTGCTTTACTCGGTATTC 59.370 41.667 0.00 0.00 0.00 1.75
2194 5119 4.575885 TCTTGCTTGCTTTACTCGGTATT 58.424 39.130 0.00 0.00 0.00 1.89
2195 5120 4.202245 TCTTGCTTGCTTTACTCGGTAT 57.798 40.909 0.00 0.00 0.00 2.73
2196 5121 3.671008 TCTTGCTTGCTTTACTCGGTA 57.329 42.857 0.00 0.00 0.00 4.02
2197 5122 2.543777 TCTTGCTTGCTTTACTCGGT 57.456 45.000 0.00 0.00 0.00 4.69
2198 5123 3.498397 TCTTTCTTGCTTGCTTTACTCGG 59.502 43.478 0.00 0.00 0.00 4.63
2199 5124 4.377841 CCTCTTTCTTGCTTGCTTTACTCG 60.378 45.833 0.00 0.00 0.00 4.18
2200 5125 4.083057 CCCTCTTTCTTGCTTGCTTTACTC 60.083 45.833 0.00 0.00 0.00 2.59
2201 5126 3.823304 CCCTCTTTCTTGCTTGCTTTACT 59.177 43.478 0.00 0.00 0.00 2.24
2202 5127 3.821033 TCCCTCTTTCTTGCTTGCTTTAC 59.179 43.478 0.00 0.00 0.00 2.01
2203 5128 4.098914 TCCCTCTTTCTTGCTTGCTTTA 57.901 40.909 0.00 0.00 0.00 1.85
2204 5129 2.949447 TCCCTCTTTCTTGCTTGCTTT 58.051 42.857 0.00 0.00 0.00 3.51
2205 5130 2.664402 TCCCTCTTTCTTGCTTGCTT 57.336 45.000 0.00 0.00 0.00 3.91
2206 5131 2.512705 CTTCCCTCTTTCTTGCTTGCT 58.487 47.619 0.00 0.00 0.00 3.91
2207 5132 1.543358 CCTTCCCTCTTTCTTGCTTGC 59.457 52.381 0.00 0.00 0.00 4.01
2208 5133 2.165998 CCCTTCCCTCTTTCTTGCTTG 58.834 52.381 0.00 0.00 0.00 4.01
2209 5134 1.076187 CCCCTTCCCTCTTTCTTGCTT 59.924 52.381 0.00 0.00 0.00 3.91
2210 5135 0.701147 CCCCTTCCCTCTTTCTTGCT 59.299 55.000 0.00 0.00 0.00 3.91
2211 5136 0.967887 GCCCCTTCCCTCTTTCTTGC 60.968 60.000 0.00 0.00 0.00 4.01
2212 5137 0.405585 TGCCCCTTCCCTCTTTCTTG 59.594 55.000 0.00 0.00 0.00 3.02
2213 5138 0.701147 CTGCCCCTTCCCTCTTTCTT 59.299 55.000 0.00 0.00 0.00 2.52
2214 5139 1.857638 GCTGCCCCTTCCCTCTTTCT 61.858 60.000 0.00 0.00 0.00 2.52
2215 5140 1.379176 GCTGCCCCTTCCCTCTTTC 60.379 63.158 0.00 0.00 0.00 2.62
2216 5141 1.854507 AGCTGCCCCTTCCCTCTTT 60.855 57.895 0.00 0.00 0.00 2.52
2217 5142 2.204213 AGCTGCCCCTTCCCTCTT 60.204 61.111 0.00 0.00 0.00 2.85
2218 5143 3.013932 CAGCTGCCCCTTCCCTCT 61.014 66.667 0.00 0.00 0.00 3.69
2219 5144 2.432174 AAACAGCTGCCCCTTCCCTC 62.432 60.000 15.27 0.00 0.00 4.30
2220 5145 2.023760 AAAACAGCTGCCCCTTCCCT 62.024 55.000 15.27 0.00 0.00 4.20
2221 5146 1.533994 AAAACAGCTGCCCCTTCCC 60.534 57.895 15.27 0.00 0.00 3.97
2222 5147 1.866853 CGAAAACAGCTGCCCCTTCC 61.867 60.000 15.27 0.00 0.00 3.46
2223 5148 0.889186 TCGAAAACAGCTGCCCCTTC 60.889 55.000 15.27 10.25 0.00 3.46
2224 5149 0.890996 CTCGAAAACAGCTGCCCCTT 60.891 55.000 15.27 1.39 0.00 3.95
2225 5150 1.302832 CTCGAAAACAGCTGCCCCT 60.303 57.895 15.27 0.00 0.00 4.79
2226 5151 2.982744 GCTCGAAAACAGCTGCCCC 61.983 63.158 15.27 0.00 33.75 5.80
2227 5152 0.673644 TAGCTCGAAAACAGCTGCCC 60.674 55.000 15.27 0.00 46.99 5.36
2228 5153 0.723981 CTAGCTCGAAAACAGCTGCC 59.276 55.000 15.27 0.00 46.99 4.85
2229 5154 0.723981 CCTAGCTCGAAAACAGCTGC 59.276 55.000 15.27 0.00 46.99 5.25
2230 5155 0.723981 GCCTAGCTCGAAAACAGCTG 59.276 55.000 13.48 13.48 46.99 4.24
2231 5156 1.404851 GAGCCTAGCTCGAAAACAGCT 60.405 52.381 0.06 1.52 45.85 4.24
2232 5157 1.003108 GAGCCTAGCTCGAAAACAGC 58.997 55.000 0.06 0.00 45.85 4.40
2242 5167 2.383442 TAAAGGGATCGAGCCTAGCT 57.617 50.000 20.86 5.29 43.88 3.32
2243 5168 2.563179 TGATAAAGGGATCGAGCCTAGC 59.437 50.000 20.86 7.73 0.00 3.42
2244 5169 4.142049 GGATGATAAAGGGATCGAGCCTAG 60.142 50.000 20.86 0.00 0.00 3.02
2245 5170 3.769844 GGATGATAAAGGGATCGAGCCTA 59.230 47.826 20.86 4.47 0.00 3.93
2246 5171 2.569404 GGATGATAAAGGGATCGAGCCT 59.431 50.000 20.86 1.84 0.00 4.58
2247 5172 2.303022 TGGATGATAAAGGGATCGAGCC 59.697 50.000 12.38 12.38 0.00 4.70
2248 5173 3.007398 AGTGGATGATAAAGGGATCGAGC 59.993 47.826 0.00 0.00 0.00 5.03
2249 5174 4.881019 AGTGGATGATAAAGGGATCGAG 57.119 45.455 0.00 0.00 0.00 4.04
2250 5175 4.901849 AGAAGTGGATGATAAAGGGATCGA 59.098 41.667 0.00 0.00 0.00 3.59
2251 5176 5.220710 AGAAGTGGATGATAAAGGGATCG 57.779 43.478 0.00 0.00 0.00 3.69
2252 5177 5.233988 CGAGAAGTGGATGATAAAGGGATC 58.766 45.833 0.00 0.00 0.00 3.36
2253 5178 4.503991 GCGAGAAGTGGATGATAAAGGGAT 60.504 45.833 0.00 0.00 0.00 3.85
2254 5179 3.181465 GCGAGAAGTGGATGATAAAGGGA 60.181 47.826 0.00 0.00 0.00 4.20
2255 5180 3.134458 GCGAGAAGTGGATGATAAAGGG 58.866 50.000 0.00 0.00 0.00 3.95
2256 5181 4.065321 AGCGAGAAGTGGATGATAAAGG 57.935 45.455 0.00 0.00 0.00 3.11
2257 5182 7.225538 ACAAATAGCGAGAAGTGGATGATAAAG 59.774 37.037 0.00 0.00 0.00 1.85
2258 5183 7.047891 ACAAATAGCGAGAAGTGGATGATAAA 58.952 34.615 0.00 0.00 0.00 1.40
2259 5184 6.582636 ACAAATAGCGAGAAGTGGATGATAA 58.417 36.000 0.00 0.00 0.00 1.75
2260 5185 6.161855 ACAAATAGCGAGAAGTGGATGATA 57.838 37.500 0.00 0.00 0.00 2.15
2261 5186 5.028549 ACAAATAGCGAGAAGTGGATGAT 57.971 39.130 0.00 0.00 0.00 2.45
2262 5187 4.471904 ACAAATAGCGAGAAGTGGATGA 57.528 40.909 0.00 0.00 0.00 2.92
2263 5188 6.851222 ATTACAAATAGCGAGAAGTGGATG 57.149 37.500 0.00 0.00 0.00 3.51
2264 5189 7.275920 AGAATTACAAATAGCGAGAAGTGGAT 58.724 34.615 0.00 0.00 0.00 3.41
2265 5190 6.640518 AGAATTACAAATAGCGAGAAGTGGA 58.359 36.000 0.00 0.00 0.00 4.02
2266 5191 6.910536 AGAATTACAAATAGCGAGAAGTGG 57.089 37.500 0.00 0.00 0.00 4.00
2267 5192 8.635877 AGTAGAATTACAAATAGCGAGAAGTG 57.364 34.615 0.00 0.00 31.96 3.16
2268 5193 9.088512 CAAGTAGAATTACAAATAGCGAGAAGT 57.911 33.333 0.00 0.00 31.96 3.01
2269 5194 9.302345 TCAAGTAGAATTACAAATAGCGAGAAG 57.698 33.333 0.00 0.00 31.96 2.85
2270 5195 9.647797 TTCAAGTAGAATTACAAATAGCGAGAA 57.352 29.630 0.00 0.00 31.96 2.87
2271 5196 9.817809 ATTCAAGTAGAATTACAAATAGCGAGA 57.182 29.630 0.00 0.00 44.48 4.04
2290 5215 9.495572 CTCAACTTAGGAAGAACTAATTCAAGT 57.504 33.333 0.00 0.00 37.29 3.16
2291 5216 8.940952 CCTCAACTTAGGAAGAACTAATTCAAG 58.059 37.037 0.00 0.00 39.15 3.02
2292 5217 7.390718 GCCTCAACTTAGGAAGAACTAATTCAA 59.609 37.037 0.00 0.00 39.15 2.69
2293 5218 6.879458 GCCTCAACTTAGGAAGAACTAATTCA 59.121 38.462 0.00 0.00 39.15 2.57
2294 5219 6.879458 TGCCTCAACTTAGGAAGAACTAATTC 59.121 38.462 0.00 0.00 39.15 2.17
2295 5220 6.779860 TGCCTCAACTTAGGAAGAACTAATT 58.220 36.000 0.00 0.00 39.15 1.40
2296 5221 6.013293 ACTGCCTCAACTTAGGAAGAACTAAT 60.013 38.462 4.85 0.00 44.38 1.73
2297 5222 5.307196 ACTGCCTCAACTTAGGAAGAACTAA 59.693 40.000 4.85 0.00 44.38 2.24
2298 5223 4.838986 ACTGCCTCAACTTAGGAAGAACTA 59.161 41.667 4.85 0.00 44.38 2.24
2299 5224 3.648545 ACTGCCTCAACTTAGGAAGAACT 59.351 43.478 4.85 0.00 44.38 3.01
2300 5225 4.009370 ACTGCCTCAACTTAGGAAGAAC 57.991 45.455 4.85 0.00 44.38 3.01
2301 5226 4.102524 TCAACTGCCTCAACTTAGGAAGAA 59.897 41.667 4.85 0.00 44.38 2.52
2302 5227 3.646162 TCAACTGCCTCAACTTAGGAAGA 59.354 43.478 4.85 0.00 44.38 2.87
2303 5228 3.999663 CTCAACTGCCTCAACTTAGGAAG 59.000 47.826 0.00 0.00 46.72 3.46
2304 5229 3.807209 GCTCAACTGCCTCAACTTAGGAA 60.807 47.826 0.00 0.00 39.15 3.36
2305 5230 2.289694 GCTCAACTGCCTCAACTTAGGA 60.290 50.000 0.00 0.00 39.15 2.94
2306 5231 2.079925 GCTCAACTGCCTCAACTTAGG 58.920 52.381 0.00 0.00 39.87 2.69
2307 5232 1.728971 CGCTCAACTGCCTCAACTTAG 59.271 52.381 0.00 0.00 0.00 2.18
2308 5233 1.070134 ACGCTCAACTGCCTCAACTTA 59.930 47.619 0.00 0.00 0.00 2.24
2309 5234 0.179045 ACGCTCAACTGCCTCAACTT 60.179 50.000 0.00 0.00 0.00 2.66
2310 5235 0.601311 GACGCTCAACTGCCTCAACT 60.601 55.000 0.00 0.00 0.00 3.16
2311 5236 0.880278 TGACGCTCAACTGCCTCAAC 60.880 55.000 0.00 0.00 0.00 3.18
2312 5237 0.035317 ATGACGCTCAACTGCCTCAA 59.965 50.000 0.00 0.00 33.28 3.02
2313 5238 0.390340 GATGACGCTCAACTGCCTCA 60.390 55.000 0.00 0.00 33.85 3.86
2314 5239 0.390340 TGATGACGCTCAACTGCCTC 60.390 55.000 0.00 0.00 0.00 4.70
2315 5240 0.251354 ATGATGACGCTCAACTGCCT 59.749 50.000 0.00 0.00 0.00 4.75
2316 5241 0.654683 GATGATGACGCTCAACTGCC 59.345 55.000 0.00 0.00 0.00 4.85
2317 5242 0.299895 CGATGATGACGCTCAACTGC 59.700 55.000 0.00 0.00 0.00 4.40
2318 5243 0.926155 CCGATGATGACGCTCAACTG 59.074 55.000 0.00 0.00 0.00 3.16
2319 5244 0.532573 ACCGATGATGACGCTCAACT 59.467 50.000 0.00 0.00 0.00 3.16
2320 5245 1.359848 AACCGATGATGACGCTCAAC 58.640 50.000 0.00 0.00 0.00 3.18
2321 5246 2.951457 TAACCGATGATGACGCTCAA 57.049 45.000 0.00 0.00 0.00 3.02
2322 5247 2.481276 CCTTAACCGATGATGACGCTCA 60.481 50.000 0.00 0.00 0.00 4.26
2323 5248 2.128035 CCTTAACCGATGATGACGCTC 58.872 52.381 0.00 0.00 0.00 5.03
2324 5249 1.754803 TCCTTAACCGATGATGACGCT 59.245 47.619 0.00 0.00 0.00 5.07
2325 5250 1.859080 GTCCTTAACCGATGATGACGC 59.141 52.381 0.00 0.00 0.00 5.19
2326 5251 3.159353 TGTCCTTAACCGATGATGACG 57.841 47.619 0.00 0.00 0.00 4.35
2327 5252 4.693283 TCATGTCCTTAACCGATGATGAC 58.307 43.478 0.00 0.00 0.00 3.06
2328 5253 5.070313 TCATCATGTCCTTAACCGATGATGA 59.930 40.000 15.58 15.58 45.84 2.92
2329 5254 5.299949 TCATCATGTCCTTAACCGATGATG 58.700 41.667 12.14 12.14 43.53 3.07
2330 5255 5.070981 ACTCATCATGTCCTTAACCGATGAT 59.929 40.000 0.00 0.00 41.37 2.45
2331 5256 4.405680 ACTCATCATGTCCTTAACCGATGA 59.594 41.667 0.00 0.00 40.64 2.92
2332 5257 4.697514 ACTCATCATGTCCTTAACCGATG 58.302 43.478 0.00 0.00 37.79 3.84
2333 5258 5.833667 TCTACTCATCATGTCCTTAACCGAT 59.166 40.000 0.00 0.00 0.00 4.18
2334 5259 5.198207 TCTACTCATCATGTCCTTAACCGA 58.802 41.667 0.00 0.00 0.00 4.69
2335 5260 5.508153 CCTCTACTCATCATGTCCTTAACCG 60.508 48.000 0.00 0.00 0.00 4.44
2336 5261 5.598830 TCCTCTACTCATCATGTCCTTAACC 59.401 44.000 0.00 0.00 0.00 2.85
2337 5262 6.716934 TCCTCTACTCATCATGTCCTTAAC 57.283 41.667 0.00 0.00 0.00 2.01
2338 5263 6.239430 GCATCCTCTACTCATCATGTCCTTAA 60.239 42.308 0.00 0.00 0.00 1.85
2339 5264 5.244851 GCATCCTCTACTCATCATGTCCTTA 59.755 44.000 0.00 0.00 0.00 2.69
2340 5265 4.040217 GCATCCTCTACTCATCATGTCCTT 59.960 45.833 0.00 0.00 0.00 3.36
2341 5266 3.577848 GCATCCTCTACTCATCATGTCCT 59.422 47.826 0.00 0.00 0.00 3.85
2342 5267 3.577848 AGCATCCTCTACTCATCATGTCC 59.422 47.826 0.00 0.00 0.00 4.02
2343 5268 4.808558 GAGCATCCTCTACTCATCATGTC 58.191 47.826 0.00 0.00 35.16 3.06
2344 5269 4.870123 GAGCATCCTCTACTCATCATGT 57.130 45.455 0.00 0.00 35.16 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.