Multiple sequence alignment - TraesCS1B01G316100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G316100 chr1B 100.000 4365 0 0 1 4365 540717683 540722047 0.000000e+00 8061.0
1 TraesCS1B01G316100 chr1B 95.812 191 7 1 276 465 301635897 301635707 1.520000e-79 307.0
2 TraesCS1B01G316100 chr1B 95.263 190 8 1 276 464 526342746 526342935 2.550000e-77 300.0
3 TraesCS1B01G316100 chr1B 93.717 191 11 1 276 465 554562057 554561867 7.140000e-73 285.0
4 TraesCS1B01G316100 chr1B 92.746 193 13 1 273 464 122978475 122978667 1.200000e-70 278.0
5 TraesCS1B01G316100 chr1D 94.560 3952 138 45 450 4365 402822191 402826101 0.000000e+00 6035.0
6 TraesCS1B01G316100 chr1D 91.803 122 9 1 1187 1308 344128544 344128664 7.510000e-38 169.0
7 TraesCS1B01G316100 chr1A 90.511 3309 180 68 450 3695 498046488 498049725 0.000000e+00 4248.0
8 TraesCS1B01G316100 chr1A 97.627 632 13 2 3735 4365 498049734 498050364 0.000000e+00 1083.0
9 TraesCS1B01G316100 chr1A 87.926 323 27 7 450 763 498042821 498043140 1.920000e-98 370.0
10 TraesCS1B01G316100 chr1A 87.616 323 28 7 450 763 498017333 498017652 8.920000e-97 364.0
11 TraesCS1B01G316100 chr7B 93.870 261 14 1 19 277 431976781 431976521 4.090000e-105 392.0
12 TraesCS1B01G316100 chr7B 93.130 262 16 1 18 277 677406526 677406265 2.460000e-102 383.0
13 TraesCS1B01G316100 chr7B 95.745 188 7 1 276 462 129963633 129963820 7.090000e-78 302.0
14 TraesCS1B01G316100 chr3B 92.366 262 17 2 18 277 163689836 163689576 1.920000e-98 370.0
15 TraesCS1B01G316100 chr3B 94.764 191 9 1 273 462 778300756 778300946 3.300000e-76 296.0
16 TraesCS1B01G316100 chr3B 81.720 372 43 14 1351 1717 582476916 582476565 1.990000e-73 287.0
17 TraesCS1B01G316100 chr4D 91.954 261 19 2 18 277 476879078 476879337 8.920000e-97 364.0
18 TraesCS1B01G316100 chr7A 91.440 257 20 1 16 270 706368234 706368490 6.950000e-93 351.0
19 TraesCS1B01G316100 chr7D 90.370 270 20 4 18 281 591013267 591012998 2.500000e-92 350.0
20 TraesCS1B01G316100 chr7D 93.264 193 12 1 273 464 412100505 412100697 2.570000e-72 283.0
21 TraesCS1B01G316100 chr6B 90.909 264 19 3 18 277 689978327 689978589 2.500000e-92 350.0
22 TraesCS1B01G316100 chr6B 89.744 273 22 3 12 279 629198082 629198353 1.160000e-90 344.0
23 TraesCS1B01G316100 chr6B 84.426 122 11 4 1193 1314 677765139 677765026 3.570000e-21 113.0
24 TraesCS1B01G316100 chr6B 85.345 116 9 4 1193 1308 677889014 677888907 3.570000e-21 113.0
25 TraesCS1B01G316100 chr6B 85.345 116 9 4 1193 1308 678065756 678065649 3.570000e-21 113.0
26 TraesCS1B01G316100 chr4B 90.566 265 20 3 18 277 395666004 395665740 3.230000e-91 346.0
27 TraesCS1B01G316100 chr4B 95.789 190 7 1 277 465 649583384 649583195 5.480000e-79 305.0
28 TraesCS1B01G316100 chr4B 94.872 195 9 1 273 466 252010600 252010794 1.970000e-78 303.0
29 TraesCS1B01G316100 chr4B 95.263 190 7 2 279 467 660752802 660752614 2.550000e-77 300.0
30 TraesCS1B01G316100 chr3A 76.438 730 108 43 996 1717 585503035 585502362 1.940000e-88 337.0
31 TraesCS1B01G316100 chr3A 94.118 204 9 2 276 476 55256174 55255971 1.520000e-79 307.0
32 TraesCS1B01G316100 chr5B 96.354 192 6 1 274 464 584167048 584166857 9.110000e-82 315.0
33 TraesCS1B01G316100 chr3D 77.817 568 86 27 1155 1717 444682220 444681688 9.110000e-82 315.0
34 TraesCS1B01G316100 chr4A 94.764 191 9 1 273 462 710670671 710670481 3.300000e-76 296.0
35 TraesCS1B01G316100 chr2B 93.122 189 11 2 279 466 321779817 321779630 4.300000e-70 276.0
36 TraesCS1B01G316100 chr2B 91.878 197 14 2 270 465 40336221 40336026 1.550000e-69 274.0
37 TraesCS1B01G316100 chr5A 87.554 233 24 5 238 466 311539478 311539709 9.310000e-67 265.0
38 TraesCS1B01G316100 chr5D 91.667 48 4 0 1002 1049 558186487 558186440 2.820000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G316100 chr1B 540717683 540722047 4364 False 8061.000000 8061 100.000000 1 4365 1 chr1B.!!$F3 4364
1 TraesCS1B01G316100 chr1D 402822191 402826101 3910 False 6035.000000 6035 94.560000 450 4365 1 chr1D.!!$F2 3915
2 TraesCS1B01G316100 chr1A 498042821 498050364 7543 False 1900.333333 4248 92.021333 450 4365 3 chr1A.!!$F2 3915
3 TraesCS1B01G316100 chr3A 585502362 585503035 673 True 337.000000 337 76.438000 996 1717 1 chr3A.!!$R2 721
4 TraesCS1B01G316100 chr3D 444681688 444682220 532 True 315.000000 315 77.817000 1155 1717 1 chr3D.!!$R1 562

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
297 298 0.179001 AGGGGGTGTTTGTTTCGAGG 60.179 55.000 0.00 0.00 0.00 4.63 F
299 300 0.179012 GGGGTGTTTGTTTCGAGGGA 60.179 55.000 0.00 0.00 0.00 4.20 F
353 354 0.634465 AAACCAAACAGGGTGGGACT 59.366 50.000 0.00 0.00 41.32 3.85 F
356 357 1.007842 ACCAAACAGGGTGGGACTTTT 59.992 47.619 0.00 0.00 43.89 2.27 F
785 4505 1.351350 AGGCTCCTTCCGTTAGCTTTT 59.649 47.619 0.00 0.00 36.48 2.27 F
2095 5876 1.270274 TGCTGGTTGAATGATGTGCAC 59.730 47.619 10.75 10.75 0.00 4.57 F
2896 6693 0.689623 CTTCCTGAGGCTGAACTGGT 59.310 55.000 0.00 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1308 5059 0.168788 CGAAGGCCACGTACGAGTAA 59.831 55.000 24.41 0.00 0.00 2.24 R
1723 5489 1.339342 TGGTGTCATCCACTCATGCTG 60.339 52.381 0.00 0.00 43.94 4.41 R
2086 5867 1.445871 GCAGTCATCTGTGCACATCA 58.554 50.000 22.00 10.71 43.05 3.07 R
2095 5876 1.645034 AATTCGTCCGCAGTCATCTG 58.355 50.000 0.00 0.00 43.87 2.90 R
2593 6390 3.592059 TGGTGATTAAACTGCGTAGGTC 58.408 45.455 5.26 0.00 0.00 3.85 R
3054 6851 0.605589 AGAAAGCACTCTCCTGACCG 59.394 55.000 0.00 0.00 0.00 4.79 R
3700 7497 1.006102 ACTCTCGTGCCGACCAAAG 60.006 57.895 0.00 0.00 0.00 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.595190 AACACAAAGACCCTTTAGGCT 57.405 42.857 0.00 0.00 40.58 4.58
22 23 2.863809 ACACAAAGACCCTTTAGGCTG 58.136 47.619 0.00 0.00 40.58 4.85
23 24 2.162681 CACAAAGACCCTTTAGGCTGG 58.837 52.381 0.00 0.00 40.58 4.85
24 25 1.780919 ACAAAGACCCTTTAGGCTGGT 59.219 47.619 0.00 0.00 40.58 4.00
25 26 2.177016 ACAAAGACCCTTTAGGCTGGTT 59.823 45.455 0.00 0.00 40.58 3.67
26 27 2.558359 CAAAGACCCTTTAGGCTGGTTG 59.442 50.000 0.00 0.00 40.58 3.77
27 28 1.446016 AGACCCTTTAGGCTGGTTGT 58.554 50.000 0.00 0.00 40.58 3.32
28 29 2.627933 AGACCCTTTAGGCTGGTTGTA 58.372 47.619 0.00 0.00 40.58 2.41
29 30 2.983898 AGACCCTTTAGGCTGGTTGTAA 59.016 45.455 0.00 0.00 40.58 2.41
30 31 3.591977 AGACCCTTTAGGCTGGTTGTAAT 59.408 43.478 0.00 0.00 40.58 1.89
31 32 3.694566 GACCCTTTAGGCTGGTTGTAATG 59.305 47.826 0.00 0.00 40.58 1.90
32 33 3.023832 CCCTTTAGGCTGGTTGTAATGG 58.976 50.000 0.00 0.00 0.00 3.16
33 34 3.023832 CCTTTAGGCTGGTTGTAATGGG 58.976 50.000 0.00 0.00 0.00 4.00
34 35 2.818751 TTAGGCTGGTTGTAATGGGG 57.181 50.000 0.00 0.00 0.00 4.96
35 36 1.974028 TAGGCTGGTTGTAATGGGGA 58.026 50.000 0.00 0.00 0.00 4.81
36 37 0.625849 AGGCTGGTTGTAATGGGGAG 59.374 55.000 0.00 0.00 0.00 4.30
37 38 0.331616 GGCTGGTTGTAATGGGGAGT 59.668 55.000 0.00 0.00 0.00 3.85
38 39 1.562475 GGCTGGTTGTAATGGGGAGTA 59.438 52.381 0.00 0.00 0.00 2.59
39 40 2.174854 GGCTGGTTGTAATGGGGAGTAT 59.825 50.000 0.00 0.00 0.00 2.12
40 41 3.477530 GCTGGTTGTAATGGGGAGTATC 58.522 50.000 0.00 0.00 0.00 2.24
41 42 3.118038 GCTGGTTGTAATGGGGAGTATCA 60.118 47.826 0.00 0.00 36.25 2.15
42 43 4.446311 GCTGGTTGTAATGGGGAGTATCAT 60.446 45.833 0.00 0.00 36.25 2.45
43 44 5.221843 GCTGGTTGTAATGGGGAGTATCATA 60.222 44.000 0.00 0.00 36.25 2.15
44 45 6.182507 TGGTTGTAATGGGGAGTATCATAC 57.817 41.667 0.00 0.00 36.25 2.39
45 46 5.668080 TGGTTGTAATGGGGAGTATCATACA 59.332 40.000 0.00 0.00 36.25 2.29
46 47 5.995897 GGTTGTAATGGGGAGTATCATACAC 59.004 44.000 0.00 0.00 36.25 2.90
47 48 6.183361 GGTTGTAATGGGGAGTATCATACACT 60.183 42.308 0.00 0.00 36.25 3.55
48 49 7.015877 GGTTGTAATGGGGAGTATCATACACTA 59.984 40.741 0.00 0.00 36.25 2.74
49 50 7.776618 TGTAATGGGGAGTATCATACACTAG 57.223 40.000 0.00 0.00 36.25 2.57
50 51 7.302948 TGTAATGGGGAGTATCATACACTAGT 58.697 38.462 0.00 0.00 36.25 2.57
51 52 8.450434 TGTAATGGGGAGTATCATACACTAGTA 58.550 37.037 0.00 0.00 36.25 1.82
52 53 9.476928 GTAATGGGGAGTATCATACACTAGTAT 57.523 37.037 0.00 0.00 41.57 2.12
53 54 8.596781 AATGGGGAGTATCATACACTAGTATC 57.403 38.462 0.00 0.00 38.88 2.24
54 55 7.098845 TGGGGAGTATCATACACTAGTATCA 57.901 40.000 0.00 0.00 38.88 2.15
55 56 7.709601 TGGGGAGTATCATACACTAGTATCAT 58.290 38.462 0.00 0.00 38.88 2.45
56 57 7.615757 TGGGGAGTATCATACACTAGTATCATG 59.384 40.741 0.00 0.00 38.88 3.07
57 58 7.416890 GGGGAGTATCATACACTAGTATCATGC 60.417 44.444 0.00 0.00 38.88 4.06
58 59 7.122799 GGGAGTATCATACACTAGTATCATGCA 59.877 40.741 0.00 0.00 38.88 3.96
59 60 8.690884 GGAGTATCATACACTAGTATCATGCAT 58.309 37.037 0.00 0.00 38.88 3.96
86 87 9.908747 ATGATACTAGTGTATGATACTACCTCC 57.091 37.037 5.39 0.00 39.29 4.30
87 88 8.327271 TGATACTAGTGTATGATACTACCTCCC 58.673 40.741 5.39 0.00 39.29 4.30
88 89 6.783517 ACTAGTGTATGATACTACCTCCCT 57.216 41.667 4.03 0.00 0.00 4.20
89 90 7.885209 ACTAGTGTATGATACTACCTCCCTA 57.115 40.000 4.03 0.00 0.00 3.53
90 91 8.285350 ACTAGTGTATGATACTACCTCCCTAA 57.715 38.462 4.03 0.00 0.00 2.69
91 92 8.902881 ACTAGTGTATGATACTACCTCCCTAAT 58.097 37.037 4.03 0.00 0.00 1.73
92 93 9.179909 CTAGTGTATGATACTACCTCCCTAATG 57.820 40.741 4.03 0.00 0.00 1.90
93 94 6.437793 AGTGTATGATACTACCTCCCTAATGC 59.562 42.308 4.03 0.00 0.00 3.56
94 95 6.210784 GTGTATGATACTACCTCCCTAATGCA 59.789 42.308 4.03 0.00 0.00 3.96
95 96 6.959954 TGTATGATACTACCTCCCTAATGCAT 59.040 38.462 4.03 0.00 0.00 3.96
96 97 8.119891 TGTATGATACTACCTCCCTAATGCATA 58.880 37.037 0.00 0.00 0.00 3.14
97 98 7.667575 ATGATACTACCTCCCTAATGCATAG 57.332 40.000 0.00 0.00 0.00 2.23
98 99 6.562228 TGATACTACCTCCCTAATGCATAGT 58.438 40.000 0.00 0.00 0.00 2.12
99 100 7.705700 TGATACTACCTCCCTAATGCATAGTA 58.294 38.462 0.00 0.81 0.00 1.82
100 101 8.344546 TGATACTACCTCCCTAATGCATAGTAT 58.655 37.037 11.08 11.08 37.18 2.12
101 102 8.770010 ATACTACCTCCCTAATGCATAGTATC 57.230 38.462 0.00 0.00 31.76 2.24
102 103 6.562228 ACTACCTCCCTAATGCATAGTATCA 58.438 40.000 0.00 0.00 0.00 2.15
103 104 7.192628 ACTACCTCCCTAATGCATAGTATCAT 58.807 38.462 0.00 0.00 0.00 2.45
104 105 6.305272 ACCTCCCTAATGCATAGTATCATG 57.695 41.667 0.00 0.00 0.00 3.07
105 106 5.787494 ACCTCCCTAATGCATAGTATCATGT 59.213 40.000 0.00 0.00 0.00 3.21
106 107 6.959954 ACCTCCCTAATGCATAGTATCATGTA 59.040 38.462 0.00 0.00 0.00 2.29
107 108 7.124901 ACCTCCCTAATGCATAGTATCATGTAG 59.875 40.741 0.00 0.00 0.00 2.74
108 109 7.124901 CCTCCCTAATGCATAGTATCATGTAGT 59.875 40.741 0.00 0.00 0.00 2.73
109 110 9.190317 CTCCCTAATGCATAGTATCATGTAGTA 57.810 37.037 0.00 0.00 0.00 1.82
110 111 8.967918 TCCCTAATGCATAGTATCATGTAGTAC 58.032 37.037 0.00 0.00 0.00 2.73
111 112 8.972127 CCCTAATGCATAGTATCATGTAGTACT 58.028 37.037 0.00 0.00 35.47 2.73
127 128 9.398170 CATGTAGTACTTTATTTATTGCCATGC 57.602 33.333 0.00 0.00 0.00 4.06
128 129 8.512966 TGTAGTACTTTATTTATTGCCATGCA 57.487 30.769 0.00 0.00 36.47 3.96
129 130 9.130661 TGTAGTACTTTATTTATTGCCATGCAT 57.869 29.630 0.00 0.00 38.76 3.96
130 131 9.398170 GTAGTACTTTATTTATTGCCATGCATG 57.602 33.333 20.19 20.19 38.76 4.06
131 132 8.236585 AGTACTTTATTTATTGCCATGCATGA 57.763 30.769 28.31 8.76 38.76 3.07
132 133 8.137437 AGTACTTTATTTATTGCCATGCATGAC 58.863 33.333 28.31 17.77 38.76 3.06
133 134 6.876155 ACTTTATTTATTGCCATGCATGACA 58.124 32.000 28.31 20.53 38.76 3.58
134 135 6.757947 ACTTTATTTATTGCCATGCATGACAC 59.242 34.615 28.31 16.49 38.76 3.67
135 136 4.739587 ATTTATTGCCATGCATGACACA 57.260 36.364 28.31 18.81 38.76 3.72
136 137 4.532314 TTTATTGCCATGCATGACACAA 57.468 36.364 28.31 25.14 38.76 3.33
137 138 4.532314 TTATTGCCATGCATGACACAAA 57.468 36.364 28.31 15.45 38.76 2.83
138 139 2.442212 TTGCCATGCATGACACAAAG 57.558 45.000 28.31 10.23 38.76 2.77
139 140 1.330234 TGCCATGCATGACACAAAGT 58.670 45.000 28.31 0.00 31.71 2.66
140 141 2.512705 TGCCATGCATGACACAAAGTA 58.487 42.857 28.31 5.91 31.71 2.24
141 142 2.889678 TGCCATGCATGACACAAAGTAA 59.110 40.909 28.31 0.00 31.71 2.24
142 143 3.244976 GCCATGCATGACACAAAGTAAC 58.755 45.455 28.31 0.00 0.00 2.50
143 144 3.305267 GCCATGCATGACACAAAGTAACA 60.305 43.478 28.31 0.00 0.00 2.41
144 145 4.618927 GCCATGCATGACACAAAGTAACAT 60.619 41.667 28.31 0.00 0.00 2.71
145 146 5.392919 GCCATGCATGACACAAAGTAACATA 60.393 40.000 28.31 0.00 0.00 2.29
146 147 6.619744 CCATGCATGACACAAAGTAACATAA 58.380 36.000 28.31 0.00 0.00 1.90
147 148 6.527722 CCATGCATGACACAAAGTAACATAAC 59.472 38.462 28.31 0.00 0.00 1.89
148 149 6.625873 TGCATGACACAAAGTAACATAACA 57.374 33.333 0.00 0.00 0.00 2.41
149 150 7.213216 TGCATGACACAAAGTAACATAACAT 57.787 32.000 0.00 0.00 0.00 2.71
150 151 7.656412 TGCATGACACAAAGTAACATAACATT 58.344 30.769 0.00 0.00 0.00 2.71
151 152 8.140628 TGCATGACACAAAGTAACATAACATTT 58.859 29.630 0.00 0.00 0.00 2.32
152 153 9.619316 GCATGACACAAAGTAACATAACATTTA 57.381 29.630 0.00 0.00 0.00 1.40
187 188 4.204792 TCATGATGATACTCCACCCTCT 57.795 45.455 0.00 0.00 0.00 3.69
188 189 4.155709 TCATGATGATACTCCACCCTCTC 58.844 47.826 0.00 0.00 0.00 3.20
189 190 3.981516 TGATGATACTCCACCCTCTCT 57.018 47.619 0.00 0.00 0.00 3.10
190 191 4.271807 TGATGATACTCCACCCTCTCTT 57.728 45.455 0.00 0.00 0.00 2.85
191 192 4.624913 TGATGATACTCCACCCTCTCTTT 58.375 43.478 0.00 0.00 0.00 2.52
192 193 4.651503 TGATGATACTCCACCCTCTCTTTC 59.348 45.833 0.00 0.00 0.00 2.62
193 194 4.338795 TGATACTCCACCCTCTCTTTCT 57.661 45.455 0.00 0.00 0.00 2.52
194 195 4.689062 TGATACTCCACCCTCTCTTTCTT 58.311 43.478 0.00 0.00 0.00 2.52
195 196 4.712337 TGATACTCCACCCTCTCTTTCTTC 59.288 45.833 0.00 0.00 0.00 2.87
196 197 2.977808 ACTCCACCCTCTCTTTCTTCA 58.022 47.619 0.00 0.00 0.00 3.02
197 198 3.525862 ACTCCACCCTCTCTTTCTTCAT 58.474 45.455 0.00 0.00 0.00 2.57
198 199 3.913163 ACTCCACCCTCTCTTTCTTCATT 59.087 43.478 0.00 0.00 0.00 2.57
199 200 4.352298 ACTCCACCCTCTCTTTCTTCATTT 59.648 41.667 0.00 0.00 0.00 2.32
200 201 5.548056 ACTCCACCCTCTCTTTCTTCATTTA 59.452 40.000 0.00 0.00 0.00 1.40
201 202 6.044404 ACTCCACCCTCTCTTTCTTCATTTAA 59.956 38.462 0.00 0.00 0.00 1.52
202 203 7.032598 TCCACCCTCTCTTTCTTCATTTAAT 57.967 36.000 0.00 0.00 0.00 1.40
203 204 6.886459 TCCACCCTCTCTTTCTTCATTTAATG 59.114 38.462 0.00 0.00 0.00 1.90
204 205 6.405176 CCACCCTCTCTTTCTTCATTTAATGC 60.405 42.308 0.00 0.00 0.00 3.56
205 206 6.376581 CACCCTCTCTTTCTTCATTTAATGCT 59.623 38.462 0.00 0.00 0.00 3.79
206 207 7.554118 CACCCTCTCTTTCTTCATTTAATGCTA 59.446 37.037 0.00 0.00 0.00 3.49
207 208 8.277918 ACCCTCTCTTTCTTCATTTAATGCTAT 58.722 33.333 0.00 0.00 0.00 2.97
208 209 8.566260 CCCTCTCTTTCTTCATTTAATGCTATG 58.434 37.037 0.00 0.00 0.00 2.23
209 210 9.334947 CCTCTCTTTCTTCATTTAATGCTATGA 57.665 33.333 0.00 0.00 0.00 2.15
211 212 9.671279 TCTCTTTCTTCATTTAATGCTATGACA 57.329 29.630 0.00 0.00 30.89 3.58
212 213 9.713740 CTCTTTCTTCATTTAATGCTATGACAC 57.286 33.333 0.00 0.00 30.89 3.67
213 214 8.677300 TCTTTCTTCATTTAATGCTATGACACC 58.323 33.333 0.00 0.00 30.89 4.16
214 215 8.579850 TTTCTTCATTTAATGCTATGACACCT 57.420 30.769 0.00 0.00 30.89 4.00
215 216 7.792374 TCTTCATTTAATGCTATGACACCTC 57.208 36.000 0.00 0.00 30.89 3.85
216 217 7.337938 TCTTCATTTAATGCTATGACACCTCA 58.662 34.615 0.00 0.00 30.89 3.86
217 218 7.994911 TCTTCATTTAATGCTATGACACCTCAT 59.005 33.333 0.00 0.00 40.47 2.90
218 219 7.734924 TCATTTAATGCTATGACACCTCATC 57.265 36.000 0.00 0.00 38.21 2.92
219 220 7.281841 TCATTTAATGCTATGACACCTCATCA 58.718 34.615 0.00 0.00 38.21 3.07
220 221 7.774625 TCATTTAATGCTATGACACCTCATCAA 59.225 33.333 0.00 0.00 38.21 2.57
221 222 7.936496 TTTAATGCTATGACACCTCATCAAA 57.064 32.000 0.00 0.00 38.21 2.69
222 223 7.936496 TTAATGCTATGACACCTCATCAAAA 57.064 32.000 0.00 0.00 38.21 2.44
223 224 8.523915 TTAATGCTATGACACCTCATCAAAAT 57.476 30.769 0.00 0.00 38.21 1.82
224 225 7.414222 AATGCTATGACACCTCATCAAAATT 57.586 32.000 0.00 0.00 38.21 1.82
225 226 6.198650 TGCTATGACACCTCATCAAAATTG 57.801 37.500 0.00 0.00 38.21 2.32
226 227 5.711506 TGCTATGACACCTCATCAAAATTGT 59.288 36.000 0.00 0.00 38.21 2.71
227 228 6.127925 TGCTATGACACCTCATCAAAATTGTC 60.128 38.462 0.00 0.00 38.21 3.18
228 229 6.094603 GCTATGACACCTCATCAAAATTGTCT 59.905 38.462 0.00 0.00 38.21 3.41
229 230 7.280876 GCTATGACACCTCATCAAAATTGTCTA 59.719 37.037 0.00 0.00 38.21 2.59
230 231 9.166173 CTATGACACCTCATCAAAATTGTCTAA 57.834 33.333 0.00 0.00 38.21 2.10
231 232 8.585471 ATGACACCTCATCAAAATTGTCTAAT 57.415 30.769 0.00 0.00 30.64 1.73
232 233 8.408043 TGACACCTCATCAAAATTGTCTAATT 57.592 30.769 0.00 0.00 38.11 1.40
233 234 8.298854 TGACACCTCATCAAAATTGTCTAATTG 58.701 33.333 0.00 0.00 36.65 2.32
234 235 7.605449 ACACCTCATCAAAATTGTCTAATTGG 58.395 34.615 0.00 0.00 36.65 3.16
235 236 6.532657 CACCTCATCAAAATTGTCTAATTGGC 59.467 38.462 0.00 0.00 36.65 4.52
236 237 6.211184 ACCTCATCAAAATTGTCTAATTGGCA 59.789 34.615 0.00 0.00 36.65 4.92
237 238 7.093201 ACCTCATCAAAATTGTCTAATTGGCAT 60.093 33.333 0.00 0.00 36.65 4.40
238 239 7.223971 CCTCATCAAAATTGTCTAATTGGCATG 59.776 37.037 0.00 0.00 36.65 4.06
239 240 6.535865 TCATCAAAATTGTCTAATTGGCATGC 59.464 34.615 9.90 9.90 36.65 4.06
240 241 5.791666 TCAAAATTGTCTAATTGGCATGCA 58.208 33.333 21.36 0.00 36.65 3.96
241 242 6.408035 TCAAAATTGTCTAATTGGCATGCAT 58.592 32.000 21.36 1.70 36.65 3.96
242 243 6.314152 TCAAAATTGTCTAATTGGCATGCATG 59.686 34.615 22.70 22.70 36.65 4.06
243 244 5.601583 AATTGTCTAATTGGCATGCATGA 57.398 34.783 30.64 10.12 35.26 3.07
244 245 5.801531 ATTGTCTAATTGGCATGCATGAT 57.198 34.783 30.64 12.15 0.00 2.45
245 246 6.904463 ATTGTCTAATTGGCATGCATGATA 57.096 33.333 30.64 14.66 0.00 2.15
246 247 5.694231 TGTCTAATTGGCATGCATGATAC 57.306 39.130 30.64 18.45 0.00 2.24
247 248 5.379187 TGTCTAATTGGCATGCATGATACT 58.621 37.500 30.64 11.76 0.00 2.12
248 249 6.532826 TGTCTAATTGGCATGCATGATACTA 58.467 36.000 30.64 15.48 0.00 1.82
249 250 6.652062 TGTCTAATTGGCATGCATGATACTAG 59.348 38.462 30.64 19.88 0.00 2.57
250 251 4.778534 AATTGGCATGCATGATACTAGC 57.221 40.909 30.64 12.56 0.00 3.42
251 252 3.497103 TTGGCATGCATGATACTAGCT 57.503 42.857 30.64 0.00 0.00 3.32
252 253 4.622260 TTGGCATGCATGATACTAGCTA 57.378 40.909 30.64 7.90 0.00 3.32
253 254 4.831674 TGGCATGCATGATACTAGCTAT 57.168 40.909 30.64 0.00 0.00 2.97
254 255 4.510571 TGGCATGCATGATACTAGCTATG 58.489 43.478 30.64 0.23 0.00 2.23
255 256 4.223477 TGGCATGCATGATACTAGCTATGA 59.777 41.667 30.64 0.00 0.00 2.15
256 257 5.104652 TGGCATGCATGATACTAGCTATGAT 60.105 40.000 30.64 0.00 0.00 2.45
257 258 6.098695 TGGCATGCATGATACTAGCTATGATA 59.901 38.462 30.64 0.00 0.00 2.15
258 259 6.423302 GGCATGCATGATACTAGCTATGATAC 59.577 42.308 30.64 5.71 0.00 2.24
259 260 7.208777 GCATGCATGATACTAGCTATGATACT 58.791 38.462 30.64 0.00 0.00 2.12
260 261 8.355913 GCATGCATGATACTAGCTATGATACTA 58.644 37.037 30.64 0.00 0.00 1.82
261 262 9.676195 CATGCATGATACTAGCTATGATACTAC 57.324 37.037 22.59 0.00 0.00 2.73
262 263 8.226819 TGCATGATACTAGCTATGATACTACC 57.773 38.462 0.00 0.00 0.00 3.18
263 264 7.834181 TGCATGATACTAGCTATGATACTACCA 59.166 37.037 0.00 0.00 0.00 3.25
264 265 8.855110 GCATGATACTAGCTATGATACTACCAT 58.145 37.037 0.00 0.00 0.00 3.55
271 272 9.111613 ACTAGCTATGATACTACCATTACGATC 57.888 37.037 0.00 0.00 0.00 3.69
272 273 7.939784 AGCTATGATACTACCATTACGATCA 57.060 36.000 0.00 0.00 0.00 2.92
273 274 7.990917 AGCTATGATACTACCATTACGATCAG 58.009 38.462 0.00 0.00 0.00 2.90
274 275 6.693545 GCTATGATACTACCATTACGATCAGC 59.306 42.308 0.00 0.00 0.00 4.26
275 276 5.386958 TGATACTACCATTACGATCAGCC 57.613 43.478 0.00 0.00 0.00 4.85
276 277 5.077564 TGATACTACCATTACGATCAGCCT 58.922 41.667 0.00 0.00 0.00 4.58
277 278 5.538813 TGATACTACCATTACGATCAGCCTT 59.461 40.000 0.00 0.00 0.00 4.35
278 279 6.717997 TGATACTACCATTACGATCAGCCTTA 59.282 38.462 0.00 0.00 0.00 2.69
279 280 5.455056 ACTACCATTACGATCAGCCTTAG 57.545 43.478 0.00 0.00 0.00 2.18
280 281 3.753294 ACCATTACGATCAGCCTTAGG 57.247 47.619 0.00 0.00 0.00 2.69
281 282 2.368875 ACCATTACGATCAGCCTTAGGG 59.631 50.000 0.00 0.00 0.00 3.53
282 283 2.289694 CCATTACGATCAGCCTTAGGGG 60.290 54.545 0.00 0.00 38.36 4.79
283 284 1.420430 TTACGATCAGCCTTAGGGGG 58.580 55.000 0.00 0.00 35.12 5.40
290 291 2.564179 AGCCTTAGGGGGTGTTTGT 58.436 52.632 0.00 0.00 45.16 2.83
291 292 0.857675 AGCCTTAGGGGGTGTTTGTT 59.142 50.000 0.00 0.00 45.16 2.83
292 293 1.219469 AGCCTTAGGGGGTGTTTGTTT 59.781 47.619 0.00 0.00 45.16 2.83
293 294 1.616865 GCCTTAGGGGGTGTTTGTTTC 59.383 52.381 0.00 0.00 35.12 2.78
294 295 1.883926 CCTTAGGGGGTGTTTGTTTCG 59.116 52.381 0.00 0.00 0.00 3.46
295 296 2.487625 CCTTAGGGGGTGTTTGTTTCGA 60.488 50.000 0.00 0.00 0.00 3.71
296 297 2.554370 TAGGGGGTGTTTGTTTCGAG 57.446 50.000 0.00 0.00 0.00 4.04
297 298 0.179001 AGGGGGTGTTTGTTTCGAGG 60.179 55.000 0.00 0.00 0.00 4.63
298 299 1.176619 GGGGGTGTTTGTTTCGAGGG 61.177 60.000 0.00 0.00 0.00 4.30
299 300 0.179012 GGGGTGTTTGTTTCGAGGGA 60.179 55.000 0.00 0.00 0.00 4.20
300 301 0.949397 GGGTGTTTGTTTCGAGGGAC 59.051 55.000 0.00 0.00 0.00 4.46
302 303 2.294979 GGTGTTTGTTTCGAGGGACTT 58.705 47.619 0.00 0.00 41.55 3.01
303 304 2.686405 GGTGTTTGTTTCGAGGGACTTT 59.314 45.455 0.00 0.00 41.55 2.66
304 305 3.129813 GGTGTTTGTTTCGAGGGACTTTT 59.870 43.478 0.00 0.00 41.55 2.27
305 306 4.381185 GGTGTTTGTTTCGAGGGACTTTTT 60.381 41.667 0.00 0.00 41.55 1.94
306 307 4.561213 GTGTTTGTTTCGAGGGACTTTTTG 59.439 41.667 0.00 0.00 41.55 2.44
307 308 4.109766 GTTTGTTTCGAGGGACTTTTTGG 58.890 43.478 0.00 0.00 41.55 3.28
308 309 3.007473 TGTTTCGAGGGACTTTTTGGT 57.993 42.857 0.00 0.00 41.55 3.67
309 310 2.685897 TGTTTCGAGGGACTTTTTGGTG 59.314 45.455 0.00 0.00 41.55 4.17
310 311 2.686405 GTTTCGAGGGACTTTTTGGTGT 59.314 45.455 0.00 0.00 41.55 4.16
311 312 3.842007 TTCGAGGGACTTTTTGGTGTA 57.158 42.857 0.00 0.00 41.55 2.90
312 313 3.396260 TCGAGGGACTTTTTGGTGTAG 57.604 47.619 0.00 0.00 41.55 2.74
313 314 2.038033 TCGAGGGACTTTTTGGTGTAGG 59.962 50.000 0.00 0.00 41.55 3.18
314 315 2.791655 GAGGGACTTTTTGGTGTAGGG 58.208 52.381 0.00 0.00 41.55 3.53
315 316 2.374170 GAGGGACTTTTTGGTGTAGGGA 59.626 50.000 0.00 0.00 41.55 4.20
316 317 2.107726 AGGGACTTTTTGGTGTAGGGAC 59.892 50.000 0.00 0.00 27.25 4.46
317 318 2.107726 GGGACTTTTTGGTGTAGGGACT 59.892 50.000 0.00 0.00 46.37 3.85
318 319 3.328637 GGGACTTTTTGGTGTAGGGACTA 59.671 47.826 0.00 0.00 41.75 2.59
319 320 4.565028 GGGACTTTTTGGTGTAGGGACTAG 60.565 50.000 0.00 0.00 44.14 2.57
320 321 4.285260 GGACTTTTTGGTGTAGGGACTAGA 59.715 45.833 0.00 0.00 44.14 2.43
321 322 5.221783 GGACTTTTTGGTGTAGGGACTAGAA 60.222 44.000 0.00 0.00 44.14 2.10
322 323 6.256643 ACTTTTTGGTGTAGGGACTAGAAA 57.743 37.500 0.00 0.00 44.14 2.52
323 324 6.665695 ACTTTTTGGTGTAGGGACTAGAAAA 58.334 36.000 0.00 0.00 44.14 2.29
324 325 7.120716 ACTTTTTGGTGTAGGGACTAGAAAAA 58.879 34.615 0.00 0.00 44.14 1.94
325 326 7.284716 ACTTTTTGGTGTAGGGACTAGAAAAAG 59.715 37.037 0.00 0.00 44.14 2.27
326 327 5.899631 TTGGTGTAGGGACTAGAAAAAGT 57.100 39.130 0.00 0.00 44.14 2.66
327 328 5.479124 TGGTGTAGGGACTAGAAAAAGTC 57.521 43.478 0.00 0.00 44.14 3.01
337 338 6.483385 GACTAGAAAAAGTCCCTAGCAAAC 57.517 41.667 0.00 0.00 40.06 2.93
338 339 5.314529 ACTAGAAAAAGTCCCTAGCAAACC 58.685 41.667 0.00 0.00 34.70 3.27
339 340 4.178956 AGAAAAAGTCCCTAGCAAACCA 57.821 40.909 0.00 0.00 0.00 3.67
340 341 4.542697 AGAAAAAGTCCCTAGCAAACCAA 58.457 39.130 0.00 0.00 0.00 3.67
341 342 4.959839 AGAAAAAGTCCCTAGCAAACCAAA 59.040 37.500 0.00 0.00 0.00 3.28
342 343 4.665833 AAAAGTCCCTAGCAAACCAAAC 57.334 40.909 0.00 0.00 0.00 2.93
343 344 3.306472 AAGTCCCTAGCAAACCAAACA 57.694 42.857 0.00 0.00 0.00 2.83
344 345 2.863809 AGTCCCTAGCAAACCAAACAG 58.136 47.619 0.00 0.00 0.00 3.16
345 346 1.886542 GTCCCTAGCAAACCAAACAGG 59.113 52.381 0.00 0.00 45.67 4.00
346 347 1.203001 TCCCTAGCAAACCAAACAGGG 60.203 52.381 0.00 0.00 43.52 4.45
347 348 1.480498 CCCTAGCAAACCAAACAGGGT 60.480 52.381 0.00 0.00 45.04 4.34
348 349 1.613437 CCTAGCAAACCAAACAGGGTG 59.387 52.381 0.00 0.00 41.32 4.61
349 350 1.613437 CTAGCAAACCAAACAGGGTGG 59.387 52.381 0.00 0.00 41.32 4.61
350 351 1.048160 AGCAAACCAAACAGGGTGGG 61.048 55.000 0.00 0.00 41.32 4.61
351 352 1.045911 GCAAACCAAACAGGGTGGGA 61.046 55.000 0.00 0.00 41.32 4.37
352 353 0.750249 CAAACCAAACAGGGTGGGAC 59.250 55.000 0.00 0.00 41.32 4.46
353 354 0.634465 AAACCAAACAGGGTGGGACT 59.366 50.000 0.00 0.00 41.32 3.85
354 355 0.634465 AACCAAACAGGGTGGGACTT 59.366 50.000 0.00 0.00 41.32 3.01
355 356 0.634465 ACCAAACAGGGTGGGACTTT 59.366 50.000 0.00 0.00 43.89 2.66
356 357 1.007842 ACCAAACAGGGTGGGACTTTT 59.992 47.619 0.00 0.00 43.89 2.27
357 358 2.115427 CCAAACAGGGTGGGACTTTTT 58.885 47.619 0.00 0.00 32.03 1.94
389 390 8.920509 TTTTTGTTAAAAGTCCTTAGAAGCAC 57.079 30.769 0.00 0.00 0.00 4.40
390 391 6.628919 TTGTTAAAAGTCCTTAGAAGCACC 57.371 37.500 0.00 0.00 0.00 5.01
391 392 5.937111 TGTTAAAAGTCCTTAGAAGCACCT 58.063 37.500 0.00 0.00 0.00 4.00
392 393 5.995897 TGTTAAAAGTCCTTAGAAGCACCTC 59.004 40.000 0.00 0.00 0.00 3.85
393 394 4.984146 AAAAGTCCTTAGAAGCACCTCT 57.016 40.909 0.00 0.00 0.00 3.69
394 395 4.984146 AAAGTCCTTAGAAGCACCTCTT 57.016 40.909 0.00 0.00 37.83 2.85
395 396 4.984146 AAGTCCTTAGAAGCACCTCTTT 57.016 40.909 0.00 0.00 34.56 2.52
396 397 4.278975 AGTCCTTAGAAGCACCTCTTTG 57.721 45.455 0.00 0.00 34.56 2.77
397 398 3.904339 AGTCCTTAGAAGCACCTCTTTGA 59.096 43.478 0.00 0.00 34.56 2.69
398 399 4.020662 AGTCCTTAGAAGCACCTCTTTGAG 60.021 45.833 0.00 0.00 34.56 3.02
399 400 4.021016 GTCCTTAGAAGCACCTCTTTGAGA 60.021 45.833 0.00 0.00 34.56 3.27
400 401 4.221703 TCCTTAGAAGCACCTCTTTGAGAG 59.778 45.833 0.00 0.00 41.96 3.20
401 402 4.020662 CCTTAGAAGCACCTCTTTGAGAGT 60.021 45.833 4.43 0.00 40.72 3.24
402 403 3.676291 AGAAGCACCTCTTTGAGAGTC 57.324 47.619 4.43 0.00 40.72 3.36
403 404 3.238597 AGAAGCACCTCTTTGAGAGTCT 58.761 45.455 0.00 0.00 40.72 3.24
404 405 3.645687 AGAAGCACCTCTTTGAGAGTCTT 59.354 43.478 0.00 4.72 40.72 3.01
405 406 4.102367 AGAAGCACCTCTTTGAGAGTCTTT 59.898 41.667 0.00 0.00 40.72 2.52
406 407 4.429854 AGCACCTCTTTGAGAGTCTTTT 57.570 40.909 0.00 0.00 40.72 2.27
407 408 4.786425 AGCACCTCTTTGAGAGTCTTTTT 58.214 39.130 0.00 0.00 40.72 1.94
432 433 5.977489 AAAAATCCCGGGACTAGAAAAAG 57.023 39.130 29.69 0.00 0.00 2.27
433 434 4.652679 AAATCCCGGGACTAGAAAAAGT 57.347 40.909 29.69 1.73 0.00 2.66
434 435 3.908643 ATCCCGGGACTAGAAAAAGTC 57.091 47.619 29.69 0.00 44.31 3.01
455 456 6.342338 GTCCTAGGACTAGAGAAACAAACA 57.658 41.667 31.12 0.00 41.57 2.83
456 457 6.157904 GTCCTAGGACTAGAGAAACAAACAC 58.842 44.000 31.12 2.21 41.57 3.32
457 458 5.245526 TCCTAGGACTAGAGAAACAAACACC 59.754 44.000 7.62 0.00 35.21 4.16
458 459 5.011738 CCTAGGACTAGAGAAACAAACACCA 59.988 44.000 1.05 0.00 35.21 4.17
459 460 4.704965 AGGACTAGAGAAACAAACACCAC 58.295 43.478 0.00 0.00 0.00 4.16
460 461 3.813724 GGACTAGAGAAACAAACACCACC 59.186 47.826 0.00 0.00 0.00 4.61
469 470 2.380941 ACAAACACCACCTTAACCCAC 58.619 47.619 0.00 0.00 0.00 4.61
507 511 8.184192 CCGTAAAGAAGAAGAATATGCAACAAT 58.816 33.333 0.00 0.00 0.00 2.71
555 560 4.518970 TGCAAGGTCTCCAATTGAACTTAC 59.481 41.667 7.12 0.00 39.20 2.34
582 587 3.139077 GACATTGTTCTCCGGTTGAACT 58.861 45.455 28.72 17.19 42.86 3.01
678 4378 1.398692 AAAGCAAGCGGGTGAAAAGA 58.601 45.000 0.00 0.00 0.00 2.52
765 4485 5.343307 AAGAAAAAGAGAAAGCAAGCCAA 57.657 34.783 0.00 0.00 0.00 4.52
785 4505 1.351350 AGGCTCCTTCCGTTAGCTTTT 59.649 47.619 0.00 0.00 36.48 2.27
871 4596 3.609703 AAAAACACCACAGGCGCA 58.390 50.000 10.83 0.00 0.00 6.09
988 4739 3.040844 GATACCTCGACCTCGCCC 58.959 66.667 0.00 0.00 39.60 6.13
1723 5489 4.557097 GCCGGATCAAGAAGTAGTAGTAGC 60.557 50.000 5.05 0.00 0.00 3.58
1749 5527 1.672356 GTGGATGACACCAGCGCTT 60.672 57.895 7.50 0.00 44.49 4.68
1769 5547 5.986135 CGCTTACTGCTCTCCATAATAAACT 59.014 40.000 0.00 0.00 40.11 2.66
1770 5548 7.145985 CGCTTACTGCTCTCCATAATAAACTA 58.854 38.462 0.00 0.00 40.11 2.24
1771 5549 7.115095 CGCTTACTGCTCTCCATAATAAACTAC 59.885 40.741 0.00 0.00 40.11 2.73
1772 5550 7.926555 GCTTACTGCTCTCCATAATAAACTACA 59.073 37.037 0.00 0.00 38.95 2.74
1773 5551 9.469807 CTTACTGCTCTCCATAATAAACTACAG 57.530 37.037 0.00 0.00 0.00 2.74
1871 5649 6.245890 AGGAGAGGAACAAAGGAATAGATG 57.754 41.667 0.00 0.00 0.00 2.90
2019 5800 5.236478 GGTATACAAATAAGTGCTGCGATGT 59.764 40.000 5.01 0.00 0.00 3.06
2027 5808 3.594603 AGTGCTGCGATGTACTTTACT 57.405 42.857 0.00 0.00 28.71 2.24
2034 5815 5.564127 GCTGCGATGTACTTTACTTCAAAAC 59.436 40.000 0.00 0.00 33.77 2.43
2053 5834 4.806342 AACTCGTTTATGTTGTGTGGAC 57.194 40.909 0.00 0.00 0.00 4.02
2057 5838 3.245754 TCGTTTATGTTGTGTGGACGAAC 59.754 43.478 0.00 0.00 35.45 3.95
2068 5849 3.612860 GTGTGGACGAACAGATACATCAC 59.387 47.826 0.00 0.00 0.00 3.06
2086 5867 7.886629 ACATCACTTTATATGCTGGTTGAAT 57.113 32.000 0.00 0.00 0.00 2.57
2095 5876 1.270274 TGCTGGTTGAATGATGTGCAC 59.730 47.619 10.75 10.75 0.00 4.57
2151 5932 4.514401 TCTACACACGCTTCTCTGAGATA 58.486 43.478 8.42 0.00 0.00 1.98
2171 5952 7.328493 TGAGATATTAGTTGTGTTCGTGAAGTG 59.672 37.037 0.00 0.00 0.00 3.16
2207 5988 6.931243 TGAACTGTTCGGTTTTGTTTTAAC 57.069 33.333 15.18 0.00 0.00 2.01
2208 5989 6.679843 TGAACTGTTCGGTTTTGTTTTAACT 58.320 32.000 15.18 0.00 0.00 2.24
2209 5990 7.146648 TGAACTGTTCGGTTTTGTTTTAACTT 58.853 30.769 15.18 0.00 0.00 2.66
2210 5991 7.652507 TGAACTGTTCGGTTTTGTTTTAACTTT 59.347 29.630 15.18 0.00 0.00 2.66
2211 5992 7.949903 ACTGTTCGGTTTTGTTTTAACTTTT 57.050 28.000 0.00 0.00 0.00 2.27
2212 5993 9.473640 AACTGTTCGGTTTTGTTTTAACTTTTA 57.526 25.926 0.00 0.00 0.00 1.52
2213 5994 9.473640 ACTGTTCGGTTTTGTTTTAACTTTTAA 57.526 25.926 0.00 0.00 0.00 1.52
2313 6108 6.022107 TGGTAGTCCCTGCTATTCTTACTA 57.978 41.667 0.00 0.00 0.00 1.82
2458 6254 5.975988 TCCTATATTGCATCCCTATTCCC 57.024 43.478 0.00 0.00 0.00 3.97
2738 6535 7.598493 CCATTTAAATCAAAATGCCTATACCCG 59.402 37.037 0.00 0.00 42.81 5.28
2820 6617 4.441356 GCTCAAAACCTGAATGTTCAACCA 60.441 41.667 0.00 0.00 36.64 3.67
2821 6618 5.659463 CTCAAAACCTGAATGTTCAACCAA 58.341 37.500 0.00 0.00 36.64 3.67
2861 6658 7.113658 TGGTTCTTCAAGATATAGTCTGTCC 57.886 40.000 0.00 0.00 37.23 4.02
2888 6685 2.107204 TCTTTCTTTGCTTCCTGAGGCT 59.893 45.455 0.00 0.00 34.20 4.58
2896 6693 0.689623 CTTCCTGAGGCTGAACTGGT 59.310 55.000 0.00 0.00 0.00 4.00
3047 6844 5.510430 AGGCTTCTATTAAGGGAAAACTGG 58.490 41.667 0.00 0.00 0.00 4.00
3054 6851 7.618137 TCTATTAAGGGAAAACTGGTACTCAC 58.382 38.462 0.00 0.00 0.00 3.51
3137 6934 4.649218 TGGCTGTGTAGTCTATGCTCATTA 59.351 41.667 0.00 0.00 0.00 1.90
3167 6964 0.317269 CGGCTGCAGTCAAACAGTTG 60.317 55.000 20.11 0.00 36.26 3.16
3249 7046 8.854614 ACTTTCTTTTATCTCTGTAACTGCAT 57.145 30.769 0.00 0.00 0.00 3.96
3253 7050 6.881065 TCTTTTATCTCTGTAACTGCATTGCT 59.119 34.615 10.49 0.00 0.00 3.91
3263 7060 2.937591 ACTGCATTGCTGAAACATTCG 58.062 42.857 20.66 0.00 0.00 3.34
3327 7124 1.650242 TTCCAGGTTTGCAGGACCCA 61.650 55.000 15.45 0.84 37.93 4.51
3472 7269 5.674525 ACCACTGTACTGATGGATATGTTG 58.325 41.667 20.26 2.11 36.94 3.33
3523 7320 4.610945 AGCTGGAATTTGACAAAAGTTCG 58.389 39.130 4.41 0.00 0.00 3.95
3554 7351 8.910351 ACATTAGAAGAAGGTATTAAGCATCC 57.090 34.615 0.00 0.00 0.00 3.51
3562 7359 8.608844 AGAAGGTATTAAGCATCCGAATTTAG 57.391 34.615 0.00 0.00 0.00 1.85
3587 7384 3.118298 AGTGGTGCCAAATTGCTTTTTCT 60.118 39.130 0.00 0.00 0.00 2.52
3613 7410 9.520515 TCTCTTTTGGTTCTTTAATTGCTAGAT 57.479 29.630 0.00 0.00 0.00 1.98
3785 7582 6.093219 ACTGTGTGCATCTAATGAATTGTCTC 59.907 38.462 0.00 0.00 0.00 3.36
3807 7604 6.810182 TCTCGGTTAAGAGCTTATTACACAAC 59.190 38.462 0.00 0.00 38.12 3.32
4041 7839 2.111669 CGGGCATGCCATCAGCTA 59.888 61.111 36.56 0.00 44.23 3.32
4095 7893 3.263170 TGGCCTGTGTGTCATTATACAGT 59.737 43.478 3.32 0.00 37.89 3.55
4097 7895 4.700213 GGCCTGTGTGTCATTATACAGTTT 59.300 41.667 0.00 0.00 37.89 2.66
4161 7959 3.630312 GCTTACTGTTCTTGTTTGTCCCA 59.370 43.478 0.00 0.00 0.00 4.37
4244 8042 2.371841 TGACTTGACTGCAGTTATGGGT 59.628 45.455 22.65 15.20 0.00 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.222603 CAGCCTAAAGGGTCTTTGTGTT 58.777 45.455 0.00 0.00 45.47 3.32
3 4 2.162681 CCAGCCTAAAGGGTCTTTGTG 58.837 52.381 0.00 0.00 45.47 3.33
5 6 2.558359 CAACCAGCCTAAAGGGTCTTTG 59.442 50.000 0.00 1.35 45.47 2.77
7 8 1.780919 ACAACCAGCCTAAAGGGTCTT 59.219 47.619 0.00 0.00 45.47 3.01
8 9 1.446016 ACAACCAGCCTAAAGGGTCT 58.554 50.000 0.00 0.00 45.47 3.85
9 10 3.428413 TTACAACCAGCCTAAAGGGTC 57.572 47.619 0.00 0.00 45.47 4.46
11 12 3.023832 CCATTACAACCAGCCTAAAGGG 58.976 50.000 0.00 0.00 35.18 3.95
12 13 3.023832 CCCATTACAACCAGCCTAAAGG 58.976 50.000 0.00 0.00 38.53 3.11
13 14 3.023832 CCCCATTACAACCAGCCTAAAG 58.976 50.000 0.00 0.00 0.00 1.85
14 15 2.650322 TCCCCATTACAACCAGCCTAAA 59.350 45.455 0.00 0.00 0.00 1.85
15 16 2.241176 CTCCCCATTACAACCAGCCTAA 59.759 50.000 0.00 0.00 0.00 2.69
16 17 1.843851 CTCCCCATTACAACCAGCCTA 59.156 52.381 0.00 0.00 0.00 3.93
17 18 0.625849 CTCCCCATTACAACCAGCCT 59.374 55.000 0.00 0.00 0.00 4.58
18 19 0.331616 ACTCCCCATTACAACCAGCC 59.668 55.000 0.00 0.00 0.00 4.85
19 20 3.118038 TGATACTCCCCATTACAACCAGC 60.118 47.826 0.00 0.00 0.00 4.85
20 21 4.771114 TGATACTCCCCATTACAACCAG 57.229 45.455 0.00 0.00 0.00 4.00
21 22 5.668080 TGTATGATACTCCCCATTACAACCA 59.332 40.000 4.03 0.00 0.00 3.67
22 23 5.995897 GTGTATGATACTCCCCATTACAACC 59.004 44.000 4.03 0.00 0.00 3.77
23 24 6.827727 AGTGTATGATACTCCCCATTACAAC 58.172 40.000 4.03 0.00 0.00 3.32
24 25 7.787904 ACTAGTGTATGATACTCCCCATTACAA 59.212 37.037 4.03 0.00 0.00 2.41
25 26 7.302948 ACTAGTGTATGATACTCCCCATTACA 58.697 38.462 4.03 0.00 0.00 2.41
26 27 7.778185 ACTAGTGTATGATACTCCCCATTAC 57.222 40.000 4.03 0.00 0.00 1.89
27 28 9.696572 GATACTAGTGTATGATACTCCCCATTA 57.303 37.037 5.39 0.00 39.29 1.90
28 29 8.177456 TGATACTAGTGTATGATACTCCCCATT 58.823 37.037 5.39 0.00 39.29 3.16
29 30 7.709601 TGATACTAGTGTATGATACTCCCCAT 58.290 38.462 5.39 0.00 39.29 4.00
30 31 7.098845 TGATACTAGTGTATGATACTCCCCA 57.901 40.000 5.39 0.00 39.29 4.96
31 32 7.416890 GCATGATACTAGTGTATGATACTCCCC 60.417 44.444 5.39 0.00 39.29 4.81
32 33 7.122799 TGCATGATACTAGTGTATGATACTCCC 59.877 40.741 5.39 0.00 39.29 4.30
33 34 8.056407 TGCATGATACTAGTGTATGATACTCC 57.944 38.462 5.39 0.00 39.29 3.85
60 61 9.908747 GGAGGTAGTATCATACACTAGTATCAT 57.091 37.037 0.00 0.00 38.88 2.45
61 62 8.327271 GGGAGGTAGTATCATACACTAGTATCA 58.673 40.741 0.00 0.00 38.88 2.15
62 63 8.550585 AGGGAGGTAGTATCATACACTAGTATC 58.449 40.741 0.00 0.00 38.88 2.24
63 64 8.465798 AGGGAGGTAGTATCATACACTAGTAT 57.534 38.462 0.00 0.00 41.57 2.12
64 65 7.885209 AGGGAGGTAGTATCATACACTAGTA 57.115 40.000 0.00 0.00 34.10 1.82
65 66 6.783517 AGGGAGGTAGTATCATACACTAGT 57.216 41.667 0.00 0.00 0.00 2.57
66 67 9.179909 CATTAGGGAGGTAGTATCATACACTAG 57.820 40.741 0.00 0.00 0.00 2.57
67 68 7.614583 GCATTAGGGAGGTAGTATCATACACTA 59.385 40.741 0.00 0.00 0.00 2.74
68 69 6.437793 GCATTAGGGAGGTAGTATCATACACT 59.562 42.308 0.00 0.00 0.00 3.55
69 70 6.210784 TGCATTAGGGAGGTAGTATCATACAC 59.789 42.308 0.00 0.00 0.00 2.90
70 71 6.319715 TGCATTAGGGAGGTAGTATCATACA 58.680 40.000 0.00 0.00 0.00 2.29
71 72 6.852420 TGCATTAGGGAGGTAGTATCATAC 57.148 41.667 0.00 0.00 0.00 2.39
72 73 8.344546 ACTATGCATTAGGGAGGTAGTATCATA 58.655 37.037 3.54 0.00 31.68 2.15
73 74 7.192628 ACTATGCATTAGGGAGGTAGTATCAT 58.807 38.462 3.54 0.00 31.68 2.45
74 75 6.562228 ACTATGCATTAGGGAGGTAGTATCA 58.438 40.000 3.54 0.00 31.68 2.15
75 76 8.770010 ATACTATGCATTAGGGAGGTAGTATC 57.230 38.462 3.54 0.00 31.70 2.24
76 77 8.344546 TGATACTATGCATTAGGGAGGTAGTAT 58.655 37.037 3.54 8.56 36.89 2.12
77 78 7.705700 TGATACTATGCATTAGGGAGGTAGTA 58.294 38.462 3.54 3.44 31.68 1.82
78 79 6.562228 TGATACTATGCATTAGGGAGGTAGT 58.438 40.000 3.54 0.88 31.68 2.73
79 80 7.124901 ACATGATACTATGCATTAGGGAGGTAG 59.875 40.741 3.54 0.00 31.68 3.18
80 81 6.959954 ACATGATACTATGCATTAGGGAGGTA 59.040 38.462 3.54 0.00 31.68 3.08
81 82 5.787494 ACATGATACTATGCATTAGGGAGGT 59.213 40.000 3.54 0.00 31.68 3.85
82 83 6.305272 ACATGATACTATGCATTAGGGAGG 57.695 41.667 3.54 0.00 31.68 4.30
83 84 8.072321 ACTACATGATACTATGCATTAGGGAG 57.928 38.462 3.54 0.00 31.68 4.30
84 85 8.967918 GTACTACATGATACTATGCATTAGGGA 58.032 37.037 3.54 0.00 31.68 4.20
85 86 8.972127 AGTACTACATGATACTATGCATTAGGG 58.028 37.037 3.54 0.00 29.70 3.53
101 102 9.398170 GCATGGCAATAAATAAAGTACTACATG 57.602 33.333 0.00 0.00 34.30 3.21
102 103 9.130661 TGCATGGCAATAAATAAAGTACTACAT 57.869 29.630 0.00 0.00 34.76 2.29
103 104 8.512966 TGCATGGCAATAAATAAAGTACTACA 57.487 30.769 0.00 0.00 34.76 2.74
104 105 9.398170 CATGCATGGCAATAAATAAAGTACTAC 57.602 33.333 19.40 0.00 43.62 2.73
105 106 9.348476 TCATGCATGGCAATAAATAAAGTACTA 57.652 29.630 25.97 0.00 43.62 1.82
106 107 8.137437 GTCATGCATGGCAATAAATAAAGTACT 58.863 33.333 26.04 0.00 43.62 2.73
107 108 7.920151 TGTCATGCATGGCAATAAATAAAGTAC 59.080 33.333 30.82 13.36 43.62 2.73
108 109 7.920151 GTGTCATGCATGGCAATAAATAAAGTA 59.080 33.333 34.01 5.25 44.94 2.24
109 110 6.757947 GTGTCATGCATGGCAATAAATAAAGT 59.242 34.615 34.01 0.00 44.94 2.66
110 111 6.757478 TGTGTCATGCATGGCAATAAATAAAG 59.243 34.615 34.01 0.00 44.94 1.85
111 112 6.637657 TGTGTCATGCATGGCAATAAATAAA 58.362 32.000 34.01 6.82 44.94 1.40
112 113 6.218108 TGTGTCATGCATGGCAATAAATAA 57.782 33.333 34.01 7.61 44.94 1.40
113 114 5.848833 TGTGTCATGCATGGCAATAAATA 57.151 34.783 34.01 14.13 44.94 1.40
114 115 4.739587 TGTGTCATGCATGGCAATAAAT 57.260 36.364 34.01 0.00 44.94 1.40
115 116 4.532314 TTGTGTCATGCATGGCAATAAA 57.468 36.364 34.01 24.20 44.94 1.40
116 117 4.021280 ACTTTGTGTCATGCATGGCAATAA 60.021 37.500 34.01 26.82 44.94 1.40
117 118 3.510753 ACTTTGTGTCATGCATGGCAATA 59.489 39.130 34.01 22.99 44.94 1.90
118 119 2.300723 ACTTTGTGTCATGCATGGCAAT 59.699 40.909 34.01 15.19 44.94 3.56
119 120 1.687660 ACTTTGTGTCATGCATGGCAA 59.312 42.857 34.01 25.74 44.94 4.52
120 121 1.330234 ACTTTGTGTCATGCATGGCA 58.670 45.000 29.45 29.45 44.86 4.92
121 122 3.244976 GTTACTTTGTGTCATGCATGGC 58.755 45.455 24.40 24.40 0.00 4.40
122 123 4.502171 TGTTACTTTGTGTCATGCATGG 57.498 40.909 25.97 10.76 0.00 3.66
123 124 7.083230 TGTTATGTTACTTTGTGTCATGCATG 58.917 34.615 21.07 21.07 0.00 4.06
124 125 7.213216 TGTTATGTTACTTTGTGTCATGCAT 57.787 32.000 0.00 0.00 0.00 3.96
125 126 6.625873 TGTTATGTTACTTTGTGTCATGCA 57.374 33.333 0.00 0.00 0.00 3.96
126 127 8.519492 AAATGTTATGTTACTTTGTGTCATGC 57.481 30.769 0.00 0.00 0.00 4.06
164 165 5.908590 AGAGGGTGGAGTATCATCATGATA 58.091 41.667 8.15 2.95 38.26 2.15
165 166 4.761086 AGAGGGTGGAGTATCATCATGAT 58.239 43.478 5.24 5.24 40.72 2.45
166 167 4.140829 AGAGAGGGTGGAGTATCATCATGA 60.141 45.833 0.00 0.00 36.25 3.07
167 168 4.158786 AGAGAGGGTGGAGTATCATCATG 58.841 47.826 0.00 0.00 36.25 3.07
168 169 4.484026 AGAGAGGGTGGAGTATCATCAT 57.516 45.455 0.00 0.00 36.25 2.45
169 170 3.981516 AGAGAGGGTGGAGTATCATCA 57.018 47.619 0.00 0.00 36.25 3.07
170 171 4.898861 AGAAAGAGAGGGTGGAGTATCATC 59.101 45.833 0.00 0.00 36.25 2.92
171 172 4.889780 AGAAAGAGAGGGTGGAGTATCAT 58.110 43.478 0.00 0.00 36.25 2.45
172 173 4.338795 AGAAAGAGAGGGTGGAGTATCA 57.661 45.455 0.00 0.00 36.25 2.15
173 174 4.712337 TGAAGAAAGAGAGGGTGGAGTATC 59.288 45.833 0.00 0.00 0.00 2.24
174 175 4.689062 TGAAGAAAGAGAGGGTGGAGTAT 58.311 43.478 0.00 0.00 0.00 2.12
175 176 4.127918 TGAAGAAAGAGAGGGTGGAGTA 57.872 45.455 0.00 0.00 0.00 2.59
176 177 2.977808 TGAAGAAAGAGAGGGTGGAGT 58.022 47.619 0.00 0.00 0.00 3.85
177 178 4.566426 AATGAAGAAAGAGAGGGTGGAG 57.434 45.455 0.00 0.00 0.00 3.86
178 179 6.448369 TTAAATGAAGAAAGAGAGGGTGGA 57.552 37.500 0.00 0.00 0.00 4.02
179 180 6.405176 GCATTAAATGAAGAAAGAGAGGGTGG 60.405 42.308 0.00 0.00 0.00 4.61
180 181 6.376581 AGCATTAAATGAAGAAAGAGAGGGTG 59.623 38.462 0.00 0.00 0.00 4.61
181 182 6.488715 AGCATTAAATGAAGAAAGAGAGGGT 58.511 36.000 0.00 0.00 0.00 4.34
182 183 8.566260 CATAGCATTAAATGAAGAAAGAGAGGG 58.434 37.037 0.00 0.00 0.00 4.30
183 184 9.334947 TCATAGCATTAAATGAAGAAAGAGAGG 57.665 33.333 0.00 0.00 0.00 3.69
185 186 9.671279 TGTCATAGCATTAAATGAAGAAAGAGA 57.329 29.630 0.00 0.00 34.06 3.10
186 187 9.713740 GTGTCATAGCATTAAATGAAGAAAGAG 57.286 33.333 0.00 0.00 34.06 2.85
187 188 8.677300 GGTGTCATAGCATTAAATGAAGAAAGA 58.323 33.333 0.00 0.00 34.06 2.52
188 189 8.680903 AGGTGTCATAGCATTAAATGAAGAAAG 58.319 33.333 0.00 0.00 34.06 2.62
189 190 8.579850 AGGTGTCATAGCATTAAATGAAGAAA 57.420 30.769 0.00 0.00 34.06 2.52
190 191 7.828717 TGAGGTGTCATAGCATTAAATGAAGAA 59.171 33.333 0.00 0.00 34.06 2.52
191 192 7.337938 TGAGGTGTCATAGCATTAAATGAAGA 58.662 34.615 0.00 0.00 34.06 2.87
192 193 7.558161 TGAGGTGTCATAGCATTAAATGAAG 57.442 36.000 0.00 0.00 34.06 3.02
193 194 7.774625 TGATGAGGTGTCATAGCATTAAATGAA 59.225 33.333 0.00 0.00 43.92 2.57
194 195 7.281841 TGATGAGGTGTCATAGCATTAAATGA 58.718 34.615 0.00 0.00 43.92 2.57
195 196 7.500720 TGATGAGGTGTCATAGCATTAAATG 57.499 36.000 0.00 0.00 43.92 2.32
196 197 8.523915 TTTGATGAGGTGTCATAGCATTAAAT 57.476 30.769 0.00 0.00 43.92 1.40
197 198 7.936496 TTTGATGAGGTGTCATAGCATTAAA 57.064 32.000 0.00 0.00 43.92 1.52
198 199 7.936496 TTTTGATGAGGTGTCATAGCATTAA 57.064 32.000 0.00 0.00 43.92 1.40
199 200 8.407832 CAATTTTGATGAGGTGTCATAGCATTA 58.592 33.333 0.00 0.00 43.92 1.90
200 201 7.093640 ACAATTTTGATGAGGTGTCATAGCATT 60.094 33.333 0.00 0.00 43.92 3.56
201 202 6.379133 ACAATTTTGATGAGGTGTCATAGCAT 59.621 34.615 0.00 0.00 43.92 3.79
202 203 5.711506 ACAATTTTGATGAGGTGTCATAGCA 59.288 36.000 0.00 0.00 43.92 3.49
203 204 6.094603 AGACAATTTTGATGAGGTGTCATAGC 59.905 38.462 4.60 0.00 43.92 2.97
204 205 7.621428 AGACAATTTTGATGAGGTGTCATAG 57.379 36.000 4.60 0.00 43.92 2.23
205 206 9.685276 ATTAGACAATTTTGATGAGGTGTCATA 57.315 29.630 4.60 0.00 43.92 2.15
206 207 8.585471 ATTAGACAATTTTGATGAGGTGTCAT 57.415 30.769 4.60 0.00 46.75 3.06
207 208 8.298854 CAATTAGACAATTTTGATGAGGTGTCA 58.701 33.333 4.60 0.00 38.24 3.58
208 209 7.756722 CCAATTAGACAATTTTGATGAGGTGTC 59.243 37.037 0.00 0.00 36.48 3.67
209 210 7.605449 CCAATTAGACAATTTTGATGAGGTGT 58.395 34.615 0.00 0.00 31.82 4.16
210 211 6.532657 GCCAATTAGACAATTTTGATGAGGTG 59.467 38.462 0.00 0.00 31.82 4.00
211 212 6.211184 TGCCAATTAGACAATTTTGATGAGGT 59.789 34.615 0.00 0.00 31.82 3.85
212 213 6.632909 TGCCAATTAGACAATTTTGATGAGG 58.367 36.000 0.00 0.00 31.82 3.86
213 214 7.254319 GCATGCCAATTAGACAATTTTGATGAG 60.254 37.037 6.36 0.00 31.82 2.90
214 215 6.535865 GCATGCCAATTAGACAATTTTGATGA 59.464 34.615 6.36 0.00 31.82 2.92
215 216 6.314152 TGCATGCCAATTAGACAATTTTGATG 59.686 34.615 16.68 0.00 31.82 3.07
216 217 6.408035 TGCATGCCAATTAGACAATTTTGAT 58.592 32.000 16.68 0.00 31.82 2.57
217 218 5.791666 TGCATGCCAATTAGACAATTTTGA 58.208 33.333 16.68 0.00 31.82 2.69
218 219 6.314152 TCATGCATGCCAATTAGACAATTTTG 59.686 34.615 22.25 0.00 31.82 2.44
219 220 6.408035 TCATGCATGCCAATTAGACAATTTT 58.592 32.000 22.25 0.00 31.82 1.82
220 221 5.979993 TCATGCATGCCAATTAGACAATTT 58.020 33.333 22.25 0.00 31.82 1.82
221 222 5.601583 TCATGCATGCCAATTAGACAATT 57.398 34.783 22.25 0.00 34.60 2.32
222 223 5.801531 ATCATGCATGCCAATTAGACAAT 57.198 34.783 22.25 2.58 0.00 2.71
223 224 5.829391 AGTATCATGCATGCCAATTAGACAA 59.171 36.000 22.25 0.00 0.00 3.18
224 225 5.379187 AGTATCATGCATGCCAATTAGACA 58.621 37.500 22.25 0.53 0.00 3.41
225 226 5.954296 AGTATCATGCATGCCAATTAGAC 57.046 39.130 22.25 10.78 0.00 2.59
226 227 5.645067 GCTAGTATCATGCATGCCAATTAGA 59.355 40.000 22.25 2.12 0.00 2.10
227 228 5.646793 AGCTAGTATCATGCATGCCAATTAG 59.353 40.000 22.25 17.63 0.00 1.73
228 229 5.563592 AGCTAGTATCATGCATGCCAATTA 58.436 37.500 22.25 3.72 0.00 1.40
229 230 4.404640 AGCTAGTATCATGCATGCCAATT 58.595 39.130 22.25 8.61 0.00 2.32
230 231 4.030314 AGCTAGTATCATGCATGCCAAT 57.970 40.909 22.25 12.74 0.00 3.16
231 232 3.497103 AGCTAGTATCATGCATGCCAA 57.503 42.857 22.25 5.34 0.00 4.52
232 233 4.223477 TCATAGCTAGTATCATGCATGCCA 59.777 41.667 22.25 8.84 0.00 4.92
233 234 4.763073 TCATAGCTAGTATCATGCATGCC 58.237 43.478 22.25 11.72 0.00 4.40
234 235 7.208777 AGTATCATAGCTAGTATCATGCATGC 58.791 38.462 22.25 11.82 0.00 4.06
235 236 9.676195 GTAGTATCATAGCTAGTATCATGCATG 57.324 37.037 21.07 21.07 0.00 4.06
236 237 8.855110 GGTAGTATCATAGCTAGTATCATGCAT 58.145 37.037 0.00 0.00 0.00 3.96
237 238 7.834181 TGGTAGTATCATAGCTAGTATCATGCA 59.166 37.037 0.00 0.00 0.00 3.96
238 239 8.226819 TGGTAGTATCATAGCTAGTATCATGC 57.773 38.462 0.00 0.00 0.00 4.06
245 246 9.111613 GATCGTAATGGTAGTATCATAGCTAGT 57.888 37.037 0.00 0.00 0.00 2.57
246 247 9.110502 TGATCGTAATGGTAGTATCATAGCTAG 57.889 37.037 0.00 0.00 0.00 3.42
247 248 9.110502 CTGATCGTAATGGTAGTATCATAGCTA 57.889 37.037 0.00 0.00 0.00 3.32
248 249 7.415765 GCTGATCGTAATGGTAGTATCATAGCT 60.416 40.741 0.00 0.00 0.00 3.32
249 250 6.693545 GCTGATCGTAATGGTAGTATCATAGC 59.306 42.308 0.00 0.00 0.00 2.97
250 251 7.067615 AGGCTGATCGTAATGGTAGTATCATAG 59.932 40.741 0.00 0.00 0.00 2.23
251 252 6.890268 AGGCTGATCGTAATGGTAGTATCATA 59.110 38.462 0.00 0.00 0.00 2.15
252 253 5.717178 AGGCTGATCGTAATGGTAGTATCAT 59.283 40.000 0.00 0.00 0.00 2.45
253 254 5.077564 AGGCTGATCGTAATGGTAGTATCA 58.922 41.667 0.00 0.00 0.00 2.15
254 255 5.646577 AGGCTGATCGTAATGGTAGTATC 57.353 43.478 0.00 0.00 0.00 2.24
255 256 6.153000 CCTAAGGCTGATCGTAATGGTAGTAT 59.847 42.308 0.00 0.00 0.00 2.12
256 257 5.475909 CCTAAGGCTGATCGTAATGGTAGTA 59.524 44.000 0.00 0.00 0.00 1.82
257 258 4.281182 CCTAAGGCTGATCGTAATGGTAGT 59.719 45.833 0.00 0.00 0.00 2.73
258 259 4.322049 CCCTAAGGCTGATCGTAATGGTAG 60.322 50.000 0.00 0.00 0.00 3.18
259 260 3.576982 CCCTAAGGCTGATCGTAATGGTA 59.423 47.826 0.00 0.00 0.00 3.25
260 261 2.368875 CCCTAAGGCTGATCGTAATGGT 59.631 50.000 0.00 0.00 0.00 3.55
261 262 2.289694 CCCCTAAGGCTGATCGTAATGG 60.290 54.545 0.00 0.00 0.00 3.16
262 263 2.289694 CCCCCTAAGGCTGATCGTAATG 60.290 54.545 0.00 0.00 0.00 1.90
263 264 1.978580 CCCCCTAAGGCTGATCGTAAT 59.021 52.381 0.00 0.00 0.00 1.89
264 265 1.343681 ACCCCCTAAGGCTGATCGTAA 60.344 52.381 0.00 0.00 0.00 3.18
265 266 0.263765 ACCCCCTAAGGCTGATCGTA 59.736 55.000 0.00 0.00 0.00 3.43
266 267 1.003051 ACCCCCTAAGGCTGATCGT 59.997 57.895 0.00 0.00 0.00 3.73
267 268 1.338136 ACACCCCCTAAGGCTGATCG 61.338 60.000 0.00 0.00 0.00 3.69
268 269 0.919710 AACACCCCCTAAGGCTGATC 59.080 55.000 0.00 0.00 0.00 2.92
269 270 1.005924 CAAACACCCCCTAAGGCTGAT 59.994 52.381 0.00 0.00 0.00 2.90
270 271 0.404040 CAAACACCCCCTAAGGCTGA 59.596 55.000 0.00 0.00 0.00 4.26
271 272 0.112412 ACAAACACCCCCTAAGGCTG 59.888 55.000 0.00 0.00 0.00 4.85
272 273 0.857675 AACAAACACCCCCTAAGGCT 59.142 50.000 0.00 0.00 0.00 4.58
273 274 1.616865 GAAACAAACACCCCCTAAGGC 59.383 52.381 0.00 0.00 0.00 4.35
274 275 1.883926 CGAAACAAACACCCCCTAAGG 59.116 52.381 0.00 0.00 0.00 2.69
275 276 2.812011 CTCGAAACAAACACCCCCTAAG 59.188 50.000 0.00 0.00 0.00 2.18
276 277 2.487625 CCTCGAAACAAACACCCCCTAA 60.488 50.000 0.00 0.00 0.00 2.69
277 278 1.072648 CCTCGAAACAAACACCCCCTA 59.927 52.381 0.00 0.00 0.00 3.53
278 279 0.179001 CCTCGAAACAAACACCCCCT 60.179 55.000 0.00 0.00 0.00 4.79
279 280 1.176619 CCCTCGAAACAAACACCCCC 61.177 60.000 0.00 0.00 0.00 5.40
280 281 0.179012 TCCCTCGAAACAAACACCCC 60.179 55.000 0.00 0.00 0.00 4.95
281 282 0.949397 GTCCCTCGAAACAAACACCC 59.051 55.000 0.00 0.00 0.00 4.61
282 283 1.963172 AGTCCCTCGAAACAAACACC 58.037 50.000 0.00 0.00 0.00 4.16
283 284 4.365899 AAAAGTCCCTCGAAACAAACAC 57.634 40.909 0.00 0.00 0.00 3.32
284 285 4.381079 CCAAAAAGTCCCTCGAAACAAACA 60.381 41.667 0.00 0.00 0.00 2.83
285 286 4.109766 CCAAAAAGTCCCTCGAAACAAAC 58.890 43.478 0.00 0.00 0.00 2.93
286 287 3.764972 ACCAAAAAGTCCCTCGAAACAAA 59.235 39.130 0.00 0.00 0.00 2.83
287 288 3.129638 CACCAAAAAGTCCCTCGAAACAA 59.870 43.478 0.00 0.00 0.00 2.83
288 289 2.685897 CACCAAAAAGTCCCTCGAAACA 59.314 45.455 0.00 0.00 0.00 2.83
289 290 2.686405 ACACCAAAAAGTCCCTCGAAAC 59.314 45.455 0.00 0.00 0.00 2.78
290 291 3.007473 ACACCAAAAAGTCCCTCGAAA 57.993 42.857 0.00 0.00 0.00 3.46
291 292 2.721425 ACACCAAAAAGTCCCTCGAA 57.279 45.000 0.00 0.00 0.00 3.71
292 293 2.038033 CCTACACCAAAAAGTCCCTCGA 59.962 50.000 0.00 0.00 0.00 4.04
293 294 2.423577 CCTACACCAAAAAGTCCCTCG 58.576 52.381 0.00 0.00 0.00 4.63
294 295 2.374170 TCCCTACACCAAAAAGTCCCTC 59.626 50.000 0.00 0.00 0.00 4.30
295 296 2.107726 GTCCCTACACCAAAAAGTCCCT 59.892 50.000 0.00 0.00 0.00 4.20
296 297 2.107726 AGTCCCTACACCAAAAAGTCCC 59.892 50.000 0.00 0.00 0.00 4.46
297 298 3.503800 AGTCCCTACACCAAAAAGTCC 57.496 47.619 0.00 0.00 0.00 3.85
298 299 5.479124 TCTAGTCCCTACACCAAAAAGTC 57.521 43.478 0.00 0.00 0.00 3.01
299 300 5.899631 TTCTAGTCCCTACACCAAAAAGT 57.100 39.130 0.00 0.00 0.00 2.66
300 301 7.284716 ACTTTTTCTAGTCCCTACACCAAAAAG 59.715 37.037 13.11 13.11 39.45 2.27
301 302 7.120716 ACTTTTTCTAGTCCCTACACCAAAAA 58.879 34.615 0.00 0.00 0.00 1.94
302 303 6.665695 ACTTTTTCTAGTCCCTACACCAAAA 58.334 36.000 0.00 0.00 0.00 2.44
303 304 6.256643 ACTTTTTCTAGTCCCTACACCAAA 57.743 37.500 0.00 0.00 0.00 3.28
304 305 5.861727 GACTTTTTCTAGTCCCTACACCAA 58.138 41.667 0.00 0.00 38.88 3.67
305 306 5.479124 GACTTTTTCTAGTCCCTACACCA 57.521 43.478 0.00 0.00 38.88 4.17
314 315 5.411977 GGTTTGCTAGGGACTTTTTCTAGTC 59.588 44.000 0.00 0.00 43.05 2.59
315 316 5.163131 TGGTTTGCTAGGGACTTTTTCTAGT 60.163 40.000 0.00 0.00 41.75 2.57
316 317 5.313712 TGGTTTGCTAGGGACTTTTTCTAG 58.686 41.667 0.00 0.00 41.75 2.43
317 318 5.313280 TGGTTTGCTAGGGACTTTTTCTA 57.687 39.130 0.00 0.00 41.75 2.10
318 319 4.178956 TGGTTTGCTAGGGACTTTTTCT 57.821 40.909 0.00 0.00 41.75 2.52
319 320 4.929819 TTGGTTTGCTAGGGACTTTTTC 57.070 40.909 0.00 0.00 41.75 2.29
320 321 4.468153 TGTTTGGTTTGCTAGGGACTTTTT 59.532 37.500 0.00 0.00 41.75 1.94
321 322 4.027437 TGTTTGGTTTGCTAGGGACTTTT 58.973 39.130 0.00 0.00 41.75 2.27
322 323 3.636764 CTGTTTGGTTTGCTAGGGACTTT 59.363 43.478 0.00 0.00 41.75 2.66
323 324 3.222603 CTGTTTGGTTTGCTAGGGACTT 58.777 45.455 0.00 0.00 41.75 3.01
324 325 2.489073 CCTGTTTGGTTTGCTAGGGACT 60.489 50.000 0.00 0.00 46.37 3.85
325 326 1.886542 CCTGTTTGGTTTGCTAGGGAC 59.113 52.381 0.00 0.00 0.00 4.46
326 327 1.203001 CCCTGTTTGGTTTGCTAGGGA 60.203 52.381 0.00 0.00 46.19 4.20
327 328 1.256812 CCCTGTTTGGTTTGCTAGGG 58.743 55.000 0.00 0.00 38.96 3.53
328 329 1.613437 CACCCTGTTTGGTTTGCTAGG 59.387 52.381 0.00 0.00 36.12 3.02
329 330 1.613437 CCACCCTGTTTGGTTTGCTAG 59.387 52.381 0.00 0.00 36.12 3.42
330 331 1.698506 CCACCCTGTTTGGTTTGCTA 58.301 50.000 0.00 0.00 36.12 3.49
331 332 1.048160 CCCACCCTGTTTGGTTTGCT 61.048 55.000 0.00 0.00 36.12 3.91
332 333 1.045911 TCCCACCCTGTTTGGTTTGC 61.046 55.000 0.00 0.00 36.12 3.68
333 334 0.750249 GTCCCACCCTGTTTGGTTTG 59.250 55.000 0.00 0.00 36.12 2.93
334 335 0.634465 AGTCCCACCCTGTTTGGTTT 59.366 50.000 0.00 0.00 36.12 3.27
335 336 0.634465 AAGTCCCACCCTGTTTGGTT 59.366 50.000 0.00 0.00 36.12 3.67
336 337 0.634465 AAAGTCCCACCCTGTTTGGT 59.366 50.000 0.00 0.00 39.96 3.67
337 338 1.788229 AAAAGTCCCACCCTGTTTGG 58.212 50.000 0.00 0.00 0.00 3.28
363 364 9.020813 GTGCTTCTAAGGACTTTTAACAAAAAG 57.979 33.333 7.07 8.64 43.15 2.27
364 365 7.977293 GGTGCTTCTAAGGACTTTTAACAAAAA 59.023 33.333 13.12 0.00 45.42 1.94
365 366 7.340999 AGGTGCTTCTAAGGACTTTTAACAAAA 59.659 33.333 13.12 0.00 45.42 2.44
366 367 6.831868 AGGTGCTTCTAAGGACTTTTAACAAA 59.168 34.615 13.12 0.00 45.42 2.83
367 368 6.362248 AGGTGCTTCTAAGGACTTTTAACAA 58.638 36.000 13.12 0.00 45.42 2.83
368 369 5.937111 AGGTGCTTCTAAGGACTTTTAACA 58.063 37.500 13.12 0.00 45.42 2.41
369 370 6.231951 AGAGGTGCTTCTAAGGACTTTTAAC 58.768 40.000 13.12 0.00 45.42 2.01
370 371 6.435292 AGAGGTGCTTCTAAGGACTTTTAA 57.565 37.500 13.12 0.00 45.42 1.52
371 372 6.435292 AAGAGGTGCTTCTAAGGACTTTTA 57.565 37.500 13.12 0.00 45.42 1.52
372 373 4.984146 AGAGGTGCTTCTAAGGACTTTT 57.016 40.909 13.12 0.00 45.42 2.27
373 374 4.984146 AAGAGGTGCTTCTAAGGACTTT 57.016 40.909 13.12 3.63 45.42 2.66
374 375 4.348168 TCAAAGAGGTGCTTCTAAGGACTT 59.652 41.667 13.12 6.52 45.42 3.01
375 376 3.904339 TCAAAGAGGTGCTTCTAAGGACT 59.096 43.478 13.12 1.24 45.42 3.85
376 377 4.021016 TCTCAAAGAGGTGCTTCTAAGGAC 60.021 45.833 5.86 5.86 45.39 3.85
377 378 4.160329 TCTCAAAGAGGTGCTTCTAAGGA 58.840 43.478 0.00 0.00 35.24 3.36
378 379 4.020662 ACTCTCAAAGAGGTGCTTCTAAGG 60.021 45.833 8.71 0.00 46.45 2.69
379 380 5.047377 AGACTCTCAAAGAGGTGCTTCTAAG 60.047 44.000 8.71 0.00 46.45 2.18
380 381 4.835615 AGACTCTCAAAGAGGTGCTTCTAA 59.164 41.667 8.71 0.00 46.45 2.10
381 382 4.411927 AGACTCTCAAAGAGGTGCTTCTA 58.588 43.478 8.71 0.00 46.45 2.10
382 383 3.238597 AGACTCTCAAAGAGGTGCTTCT 58.761 45.455 8.71 0.00 46.45 2.85
383 384 3.676291 AGACTCTCAAAGAGGTGCTTC 57.324 47.619 8.71 0.00 46.45 3.86
384 385 4.429854 AAAGACTCTCAAAGAGGTGCTT 57.570 40.909 8.71 6.18 46.45 3.91
385 386 4.429854 AAAAGACTCTCAAAGAGGTGCT 57.570 40.909 8.71 0.83 46.45 4.40
410 411 5.391256 ACTTTTTCTAGTCCCGGGATTTTT 58.609 37.500 29.73 15.30 0.00 1.94
411 412 4.994282 ACTTTTTCTAGTCCCGGGATTTT 58.006 39.130 29.73 17.95 0.00 1.82
412 413 4.586884 GACTTTTTCTAGTCCCGGGATTT 58.413 43.478 29.73 20.65 38.88 2.17
413 414 4.217836 GACTTTTTCTAGTCCCGGGATT 57.782 45.455 29.73 26.33 38.88 3.01
414 415 3.908643 GACTTTTTCTAGTCCCGGGAT 57.091 47.619 29.73 18.02 38.88 3.85
432 433 6.157904 GTGTTTGTTTCTCTAGTCCTAGGAC 58.842 44.000 31.29 31.29 44.86 3.85
433 434 5.245526 GGTGTTTGTTTCTCTAGTCCTAGGA 59.754 44.000 7.62 7.62 34.06 2.94
434 435 5.011738 TGGTGTTTGTTTCTCTAGTCCTAGG 59.988 44.000 0.82 0.82 34.06 3.02
435 436 5.927115 GTGGTGTTTGTTTCTCTAGTCCTAG 59.073 44.000 0.00 0.00 34.56 3.02
436 437 5.221581 GGTGGTGTTTGTTTCTCTAGTCCTA 60.222 44.000 0.00 0.00 0.00 2.94
437 438 4.444449 GGTGGTGTTTGTTTCTCTAGTCCT 60.444 45.833 0.00 0.00 0.00 3.85
438 439 3.813724 GGTGGTGTTTGTTTCTCTAGTCC 59.186 47.826 0.00 0.00 0.00 3.85
439 440 4.704965 AGGTGGTGTTTGTTTCTCTAGTC 58.295 43.478 0.00 0.00 0.00 2.59
440 441 4.772886 AGGTGGTGTTTGTTTCTCTAGT 57.227 40.909 0.00 0.00 0.00 2.57
441 442 6.017357 GGTTAAGGTGGTGTTTGTTTCTCTAG 60.017 42.308 0.00 0.00 0.00 2.43
442 443 5.824097 GGTTAAGGTGGTGTTTGTTTCTCTA 59.176 40.000 0.00 0.00 0.00 2.43
443 444 4.643334 GGTTAAGGTGGTGTTTGTTTCTCT 59.357 41.667 0.00 0.00 0.00 3.10
444 445 4.202080 GGGTTAAGGTGGTGTTTGTTTCTC 60.202 45.833 0.00 0.00 0.00 2.87
445 446 3.702548 GGGTTAAGGTGGTGTTTGTTTCT 59.297 43.478 0.00 0.00 0.00 2.52
446 447 3.447944 TGGGTTAAGGTGGTGTTTGTTTC 59.552 43.478 0.00 0.00 0.00 2.78
447 448 3.196039 GTGGGTTAAGGTGGTGTTTGTTT 59.804 43.478 0.00 0.00 0.00 2.83
448 449 2.761767 GTGGGTTAAGGTGGTGTTTGTT 59.238 45.455 0.00 0.00 0.00 2.83
449 450 2.380941 GTGGGTTAAGGTGGTGTTTGT 58.619 47.619 0.00 0.00 0.00 2.83
450 451 1.684450 GGTGGGTTAAGGTGGTGTTTG 59.316 52.381 0.00 0.00 0.00 2.93
451 452 1.288335 TGGTGGGTTAAGGTGGTGTTT 59.712 47.619 0.00 0.00 0.00 2.83
452 453 0.927767 TGGTGGGTTAAGGTGGTGTT 59.072 50.000 0.00 0.00 0.00 3.32
453 454 0.927767 TTGGTGGGTTAAGGTGGTGT 59.072 50.000 0.00 0.00 0.00 4.16
454 455 1.960689 CTTTGGTGGGTTAAGGTGGTG 59.039 52.381 0.00 0.00 0.00 4.17
455 456 1.133294 CCTTTGGTGGGTTAAGGTGGT 60.133 52.381 0.00 0.00 34.93 4.16
456 457 1.627864 CCTTTGGTGGGTTAAGGTGG 58.372 55.000 0.00 0.00 34.93 4.61
459 460 2.952116 TGAACCTTTGGTGGGTTAAGG 58.048 47.619 0.00 0.00 45.78 2.69
460 461 3.069016 GGTTGAACCTTTGGTGGGTTAAG 59.931 47.826 7.20 0.00 45.78 1.85
469 470 4.577283 TCTTCTTTACGGTTGAACCTTTGG 59.423 41.667 13.18 0.00 35.66 3.28
477 478 6.876789 TGCATATTCTTCTTCTTTACGGTTGA 59.123 34.615 0.00 0.00 0.00 3.18
507 511 9.967346 CAATATTCTAAGATAACTCGACCTTCA 57.033 33.333 0.00 0.00 0.00 3.02
555 560 4.568152 ACCGGAGAACAATGTCAAAAAG 57.432 40.909 9.46 0.00 0.00 2.27
569 574 2.168496 CTAGACCAGTTCAACCGGAGA 58.832 52.381 9.46 2.03 0.00 3.71
582 587 9.031537 TGTTGAATCATCTTTACTACTAGACCA 57.968 33.333 0.00 0.00 0.00 4.02
678 4378 6.863126 CACACGGCATTCTTTTCTTATCTTTT 59.137 34.615 0.00 0.00 0.00 2.27
695 4400 1.227793 TCACATGCTTCACACGGCA 60.228 52.632 0.00 0.00 42.80 5.69
750 4455 0.112025 AGCCTTGGCTTGCTTTCTCT 59.888 50.000 8.56 0.00 32.94 3.10
751 4456 0.525311 GAGCCTTGGCTTGCTTTCTC 59.475 55.000 15.92 0.00 38.11 2.87
752 4457 0.897401 GGAGCCTTGGCTTGCTTTCT 60.897 55.000 15.92 0.00 38.11 2.52
757 4462 2.346541 GGAAGGAGCCTTGGCTTGC 61.347 63.158 15.92 3.75 36.26 4.01
758 4463 2.042831 CGGAAGGAGCCTTGGCTTG 61.043 63.158 15.92 0.00 36.26 4.01
762 4467 0.744771 GCTAACGGAAGGAGCCTTGG 60.745 60.000 6.49 1.17 37.99 3.61
765 4485 0.984995 AAAGCTAACGGAAGGAGCCT 59.015 50.000 0.00 0.00 42.97 4.58
871 4596 3.620785 GCGGGATCTGATCGGCCT 61.621 66.667 16.80 0.00 0.00 5.19
1110 4861 1.303423 ATGAGGAGGAGGAGGAGGCT 61.303 60.000 0.00 0.00 0.00 4.58
1308 5059 0.168788 CGAAGGCCACGTACGAGTAA 59.831 55.000 24.41 0.00 0.00 2.24
1723 5489 1.339342 TGGTGTCATCCACTCATGCTG 60.339 52.381 0.00 0.00 43.94 4.41
1749 5527 8.534954 ACTGTAGTTTATTATGGAGAGCAGTA 57.465 34.615 0.00 0.00 31.64 2.74
1795 5573 8.784994 GCAAGAGCACTGTATTATAGAGTACTA 58.215 37.037 1.63 0.00 41.58 1.82
1796 5574 7.653647 GCAAGAGCACTGTATTATAGAGTACT 58.346 38.462 2.40 2.40 41.58 2.73
1797 5575 7.861176 GCAAGAGCACTGTATTATAGAGTAC 57.139 40.000 1.63 0.00 41.58 2.73
1822 5600 5.483685 TCTCAACTATACTTGCCACAAGT 57.516 39.130 16.42 16.42 0.00 3.16
1871 5649 7.776933 TCACAAGTGATATAAGAAGACATGC 57.223 36.000 0.00 0.00 34.14 4.06
2027 5808 6.030849 CCACACAACATAAACGAGTTTTGAA 58.969 36.000 6.53 0.00 34.23 2.69
2034 5815 3.054166 TCGTCCACACAACATAAACGAG 58.946 45.455 0.00 0.00 33.28 4.18
2041 5822 2.613026 TCTGTTCGTCCACACAACAT 57.387 45.000 0.00 0.00 29.82 2.71
2053 5834 8.430828 CAGCATATAAAGTGATGTATCTGTTCG 58.569 37.037 0.00 0.00 0.00 3.95
2057 5838 8.501580 CAACCAGCATATAAAGTGATGTATCTG 58.498 37.037 0.00 0.00 31.38 2.90
2068 5849 6.639686 GCACATCATTCAACCAGCATATAAAG 59.360 38.462 0.00 0.00 0.00 1.85
2086 5867 1.445871 GCAGTCATCTGTGCACATCA 58.554 50.000 22.00 10.71 43.05 3.07
2095 5876 1.645034 AATTCGTCCGCAGTCATCTG 58.355 50.000 0.00 0.00 43.87 2.90
2137 5918 6.269315 ACACAACTAATATCTCAGAGAAGCG 58.731 40.000 3.63 0.00 0.00 4.68
2151 5932 4.260620 GCACACTTCACGAACACAACTAAT 60.261 41.667 0.00 0.00 0.00 1.73
2193 5974 7.895767 CACAGCTTAAAAGTTAAAACAAAACCG 59.104 33.333 0.00 0.00 0.00 4.44
2265 6060 4.867086 ACCTTACCCTCCCAAATAACATG 58.133 43.478 0.00 0.00 0.00 3.21
2266 6061 5.255443 AGAACCTTACCCTCCCAAATAACAT 59.745 40.000 0.00 0.00 0.00 2.71
2434 6230 6.069381 AGGGAATAGGGATGCAATATAGGAAC 60.069 42.308 0.00 0.00 0.00 3.62
2593 6390 3.592059 TGGTGATTAAACTGCGTAGGTC 58.408 45.455 5.26 0.00 0.00 3.85
2738 6535 5.181811 TCAAAACACTGATGATGGTGATCAC 59.818 40.000 17.91 17.91 41.52 3.06
2820 6617 4.646492 AGAACCAAACTGCAAGAGACAATT 59.354 37.500 0.00 0.00 37.43 2.32
2821 6618 4.210331 AGAACCAAACTGCAAGAGACAAT 58.790 39.130 0.00 0.00 37.43 2.71
2861 6658 2.746362 AGGAAGCAAAGAAAGAGATGCG 59.254 45.455 0.00 0.00 43.39 4.73
2888 6685 2.203337 GGCAGCACCACCAGTTCA 60.203 61.111 0.00 0.00 38.86 3.18
2896 6693 3.214190 AATGGCAGAGGCAGCACCA 62.214 57.895 0.00 0.00 42.43 4.17
3047 6844 1.469308 CACTCTCCTGACCGTGAGTAC 59.531 57.143 0.00 0.00 37.64 2.73
3054 6851 0.605589 AGAAAGCACTCTCCTGACCG 59.394 55.000 0.00 0.00 0.00 4.79
3167 6964 5.043248 CAGTTCATGGAAAGTTCAACCAAC 58.957 41.667 0.00 0.00 37.24 3.77
3249 7046 6.312399 AGTATCAAACGAATGTTTCAGCAA 57.688 33.333 0.00 0.00 44.94 3.91
3253 7050 7.225734 TCTCACAAGTATCAAACGAATGTTTCA 59.774 33.333 0.00 0.00 44.94 2.69
3263 7060 8.082852 TCAGAACTAGTCTCACAAGTATCAAAC 58.917 37.037 0.00 0.00 32.70 2.93
3327 7124 5.143369 AGAGAGCCTTGGAAAACAGAATTT 58.857 37.500 0.00 0.00 0.00 1.82
3456 7253 7.684428 GCAGTGACTACAACATATCCATCAGTA 60.684 40.741 0.00 0.00 0.00 2.74
3472 7269 1.399440 CACCATGCATGCAGTGACTAC 59.601 52.381 27.41 0.00 31.79 2.73
3554 7351 2.422597 TGGCACCACTCACTAAATTCG 58.577 47.619 0.00 0.00 0.00 3.34
3562 7359 0.675633 AGCAATTTGGCACCACTCAC 59.324 50.000 0.00 0.00 35.83 3.51
3587 7384 8.918202 TCTAGCAATTAAAGAACCAAAAGAGA 57.082 30.769 0.00 0.00 0.00 3.10
3613 7410 5.712917 GGATGGCCCCATAAAACGAATATAA 59.287 40.000 0.00 0.00 36.70 0.98
3615 7412 4.086457 GGATGGCCCCATAAAACGAATAT 58.914 43.478 0.00 0.00 36.70 1.28
3700 7497 1.006102 ACTCTCGTGCCGACCAAAG 60.006 57.895 0.00 0.00 0.00 2.77
3707 7504 2.202623 GCTACCACTCTCGTGCCG 60.203 66.667 0.00 0.00 39.86 5.69
3733 7530 6.925610 TGGAAATCAAGATAACCTGAATCG 57.074 37.500 0.00 0.00 0.00 3.34
3785 7582 6.963049 AGTTGTGTAATAAGCTCTTAACCG 57.037 37.500 0.00 0.00 0.00 4.44
3807 7604 4.008330 TCGAGGTGAGGTACTGAAACTAG 58.992 47.826 0.00 0.00 41.55 2.57
3947 7744 2.633967 AGGAAACTGGCATGCAATTCAA 59.366 40.909 21.36 0.00 41.13 2.69
4041 7839 2.691526 CAGCCATAGGATGTGCAATTGT 59.308 45.455 7.40 0.00 34.00 2.71
4116 7914 7.919151 AGCCCAAGTTTAACTTCTATAGTTCT 58.081 34.615 7.45 0.00 43.67 3.01
4161 7959 3.139077 CCTCCAAGCTCAAGTTAACGTT 58.861 45.455 5.88 5.88 0.00 3.99
4285 8083 4.922206 TGTATCATCTGAAAAGCCACCTT 58.078 39.130 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.