Multiple sequence alignment - TraesCS1B01G312900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G312900 chr1B 100.000 4696 0 0 1 4696 536668802 536664107 0.000000e+00 8672.0
1 TraesCS1B01G312900 chr1D 90.376 2556 166 34 2194 4696 399949279 399946751 0.000000e+00 3284.0
2 TraesCS1B01G312900 chr1D 89.161 1513 83 24 652 2126 399950749 399949280 0.000000e+00 1810.0
3 TraesCS1B01G312900 chr1A 90.539 1744 74 30 1700 3372 496314286 496312563 0.000000e+00 2222.0
4 TraesCS1B01G312900 chr1A 91.940 1067 68 15 3636 4696 496312220 496311166 0.000000e+00 1478.0
5 TraesCS1B01G312900 chr1A 88.956 996 43 27 727 1706 496315337 496314393 0.000000e+00 1168.0
6 TraesCS1B01G312900 chr1A 94.904 314 15 1 3370 3682 496312532 496312219 1.520000e-134 490.0
7 TraesCS1B01G312900 chr3B 94.164 377 20 2 4 379 526580233 526579858 1.470000e-159 573.0
8 TraesCS1B01G312900 chr3B 93.931 379 21 2 4 380 202671022 202670644 5.270000e-159 571.0
9 TraesCS1B01G312900 chr7B 93.540 387 20 3 2 383 524743888 524744274 5.270000e-159 571.0
10 TraesCS1B01G312900 chr7B 93.701 381 23 1 1 380 137887160 137887540 1.900000e-158 569.0
11 TraesCS1B01G312900 chr5B 94.133 375 20 2 8 380 419558077 419558451 1.900000e-158 569.0
12 TraesCS1B01G312900 chr2B 92.911 395 22 6 2 392 173006104 173005712 1.900000e-158 569.0
13 TraesCS1B01G312900 chr2B 93.473 383 22 3 1 381 631868147 631868528 2.450000e-157 566.0
14 TraesCS1B01G312900 chr2B 93.668 379 23 1 4 381 635319420 635319798 2.450000e-157 566.0
15 TraesCS1B01G312900 chr4D 93.473 383 22 3 2 382 331502047 331502428 2.450000e-157 566.0
16 TraesCS1B01G312900 chr4B 80.916 131 22 3 492 621 518077258 518077386 2.990000e-17 100.0
17 TraesCS1B01G312900 chr5A 90.909 44 4 0 3303 3346 25886301 25886344 5.070000e-05 60.2
18 TraesCS1B01G312900 chr5A 92.500 40 1 2 3296 3334 454439524 454439486 6.560000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G312900 chr1B 536664107 536668802 4695 True 8672.0 8672 100.00000 1 4696 1 chr1B.!!$R1 4695
1 TraesCS1B01G312900 chr1D 399946751 399950749 3998 True 2547.0 3284 89.76850 652 4696 2 chr1D.!!$R1 4044
2 TraesCS1B01G312900 chr1A 496311166 496315337 4171 True 1339.5 2222 91.58475 727 4696 4 chr1A.!!$R1 3969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
562 563 0.034337 GGTGCGTGTTCCTTGTCCTA 59.966 55.000 0.00 0.0 0.00 2.94 F
581 582 0.037232 ACTCTACTTCGCTGGCAACC 60.037 55.000 0.00 0.0 0.00 3.77 F
630 631 0.316772 CGTCGTACATAGGCTGACGG 60.317 60.000 13.19 0.0 46.19 4.79 F
1115 1124 0.456312 GTTGGTACTCTCGCACGGAG 60.456 60.000 0.00 6.9 44.58 4.63 F
2034 2199 0.534877 CATCGGCGATCATTTGGGGA 60.535 55.000 21.25 0.0 0.00 4.81 F
2041 2206 1.739466 CGATCATTTGGGGACACACTG 59.261 52.381 0.00 0.0 42.67 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1403 1427 0.036306 ACTTCGCCCGGATTGAAAGT 59.964 50.000 0.73 2.27 0.00 2.66 R
2015 2180 0.534877 TCCCCAAATGATCGCCGATG 60.535 55.000 3.34 0.00 0.00 3.84 R
2158 2324 1.684450 ACAAAACGGGGTTAGCAAAGG 59.316 47.619 0.00 0.00 0.00 3.11 R
3025 3225 1.340600 CCCTTAATCAGGTCCCGCAAA 60.341 52.381 0.00 0.00 42.02 3.68 R
3464 3725 1.000955 GGGCTGTAGATGTATGACCCG 59.999 57.143 0.00 0.00 0.00 5.28 R
3752 4058 1.065102 GAGAGCGCACCACTAATACGA 59.935 52.381 11.47 0.00 0.00 3.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.526110 GGGCCCTGGGTCACTTTT 59.474 61.111 20.86 0.00 0.00 2.27
18 19 1.606601 GGGCCCTGGGTCACTTTTC 60.607 63.158 20.86 0.00 0.00 2.29
19 20 1.152830 GGCCCTGGGTCACTTTTCA 59.847 57.895 13.71 0.00 0.00 2.69
20 21 0.251787 GGCCCTGGGTCACTTTTCAT 60.252 55.000 13.71 0.00 0.00 2.57
21 22 1.177401 GCCCTGGGTCACTTTTCATC 58.823 55.000 15.56 0.00 0.00 2.92
22 23 1.547675 GCCCTGGGTCACTTTTCATCA 60.548 52.381 15.56 0.00 0.00 3.07
23 24 2.885554 GCCCTGGGTCACTTTTCATCAT 60.886 50.000 15.56 0.00 0.00 2.45
24 25 3.624707 GCCCTGGGTCACTTTTCATCATA 60.625 47.826 15.56 0.00 0.00 2.15
25 26 4.796606 CCCTGGGTCACTTTTCATCATAT 58.203 43.478 3.97 0.00 0.00 1.78
26 27 5.203528 CCCTGGGTCACTTTTCATCATATT 58.796 41.667 3.97 0.00 0.00 1.28
27 28 5.658190 CCCTGGGTCACTTTTCATCATATTT 59.342 40.000 3.97 0.00 0.00 1.40
28 29 6.406177 CCCTGGGTCACTTTTCATCATATTTG 60.406 42.308 3.97 0.00 0.00 2.32
29 30 5.964758 TGGGTCACTTTTCATCATATTTGC 58.035 37.500 0.00 0.00 0.00 3.68
30 31 5.105392 TGGGTCACTTTTCATCATATTTGCC 60.105 40.000 0.00 0.00 0.00 4.52
31 32 5.127682 GGGTCACTTTTCATCATATTTGCCT 59.872 40.000 0.00 0.00 0.00 4.75
32 33 6.351286 GGGTCACTTTTCATCATATTTGCCTT 60.351 38.462 0.00 0.00 0.00 4.35
33 34 7.099120 GGTCACTTTTCATCATATTTGCCTTT 58.901 34.615 0.00 0.00 0.00 3.11
34 35 7.063780 GGTCACTTTTCATCATATTTGCCTTTG 59.936 37.037 0.00 0.00 0.00 2.77
35 36 6.591062 TCACTTTTCATCATATTTGCCTTTGC 59.409 34.615 0.00 0.00 38.26 3.68
36 37 5.577945 ACTTTTCATCATATTTGCCTTTGCG 59.422 36.000 0.00 0.00 41.78 4.85
37 38 4.979943 TTCATCATATTTGCCTTTGCGA 57.020 36.364 0.00 0.00 41.78 5.10
38 39 5.518848 TTCATCATATTTGCCTTTGCGAT 57.481 34.783 0.00 0.00 41.78 4.58
39 40 5.112220 TCATCATATTTGCCTTTGCGATC 57.888 39.130 0.00 0.00 41.78 3.69
40 41 4.823442 TCATCATATTTGCCTTTGCGATCT 59.177 37.500 0.00 0.00 41.78 2.75
41 42 5.997129 TCATCATATTTGCCTTTGCGATCTA 59.003 36.000 0.00 0.00 41.78 1.98
42 43 6.656270 TCATCATATTTGCCTTTGCGATCTAT 59.344 34.615 0.00 0.00 41.78 1.98
43 44 6.882610 TCATATTTGCCTTTGCGATCTATT 57.117 33.333 0.00 0.00 41.78 1.73
44 45 7.275888 TCATATTTGCCTTTGCGATCTATTT 57.724 32.000 0.00 0.00 41.78 1.40
45 46 7.715657 TCATATTTGCCTTTGCGATCTATTTT 58.284 30.769 0.00 0.00 41.78 1.82
46 47 8.196771 TCATATTTGCCTTTGCGATCTATTTTT 58.803 29.630 0.00 0.00 41.78 1.94
47 48 6.892310 ATTTGCCTTTGCGATCTATTTTTC 57.108 33.333 0.00 0.00 41.78 2.29
48 49 5.643379 TTGCCTTTGCGATCTATTTTTCT 57.357 34.783 0.00 0.00 41.78 2.52
49 50 5.643379 TGCCTTTGCGATCTATTTTTCTT 57.357 34.783 0.00 0.00 41.78 2.52
50 51 6.024552 TGCCTTTGCGATCTATTTTTCTTT 57.975 33.333 0.00 0.00 41.78 2.52
51 52 6.092748 TGCCTTTGCGATCTATTTTTCTTTC 58.907 36.000 0.00 0.00 41.78 2.62
52 53 5.516696 GCCTTTGCGATCTATTTTTCTTTCC 59.483 40.000 0.00 0.00 0.00 3.13
53 54 6.620678 CCTTTGCGATCTATTTTTCTTTCCA 58.379 36.000 0.00 0.00 0.00 3.53
54 55 7.260603 CCTTTGCGATCTATTTTTCTTTCCAT 58.739 34.615 0.00 0.00 0.00 3.41
55 56 7.761249 CCTTTGCGATCTATTTTTCTTTCCATT 59.239 33.333 0.00 0.00 0.00 3.16
56 57 9.143631 CTTTGCGATCTATTTTTCTTTCCATTT 57.856 29.630 0.00 0.00 0.00 2.32
98 99 8.972458 AACCAAAAATACAAAAATACCTTGCT 57.028 26.923 0.00 0.00 0.00 3.91
99 100 8.376889 ACCAAAAATACAAAAATACCTTGCTG 57.623 30.769 0.00 0.00 0.00 4.41
100 101 7.041440 ACCAAAAATACAAAAATACCTTGCTGC 60.041 33.333 0.00 0.00 0.00 5.25
101 102 7.041508 CCAAAAATACAAAAATACCTTGCTGCA 60.042 33.333 0.00 0.00 0.00 4.41
102 103 8.341173 CAAAAATACAAAAATACCTTGCTGCAA 58.659 29.630 15.16 15.16 0.00 4.08
103 104 8.620116 AAAATACAAAAATACCTTGCTGCAAT 57.380 26.923 16.38 4.53 0.00 3.56
104 105 8.620116 AAATACAAAAATACCTTGCTGCAATT 57.380 26.923 16.38 8.59 0.00 2.32
105 106 8.620116 AATACAAAAATACCTTGCTGCAATTT 57.380 26.923 16.38 10.44 0.00 1.82
106 107 9.717942 AATACAAAAATACCTTGCTGCAATTTA 57.282 25.926 16.38 10.19 0.00 1.40
107 108 9.889128 ATACAAAAATACCTTGCTGCAATTTAT 57.111 25.926 16.38 11.97 0.00 1.40
108 109 8.620116 ACAAAAATACCTTGCTGCAATTTATT 57.380 26.923 16.38 16.64 0.00 1.40
109 110 9.065798 ACAAAAATACCTTGCTGCAATTTATTT 57.934 25.926 22.83 22.83 29.39 1.40
110 111 9.332301 CAAAAATACCTTGCTGCAATTTATTTG 57.668 29.630 25.99 21.29 38.43 2.32
111 112 8.620116 AAAATACCTTGCTGCAATTTATTTGT 57.380 26.923 25.99 18.50 37.65 2.83
112 113 8.620116 AAATACCTTGCTGCAATTTATTTGTT 57.380 26.923 25.32 12.62 37.65 2.83
113 114 7.832503 ATACCTTGCTGCAATTTATTTGTTC 57.167 32.000 16.38 0.00 37.65 3.18
114 115 4.996758 ACCTTGCTGCAATTTATTTGTTCC 59.003 37.500 16.38 0.00 37.65 3.62
115 116 4.091800 CCTTGCTGCAATTTATTTGTTCCG 59.908 41.667 16.38 0.00 37.65 4.30
116 117 4.250116 TGCTGCAATTTATTTGTTCCGT 57.750 36.364 0.00 0.00 37.65 4.69
117 118 3.986572 TGCTGCAATTTATTTGTTCCGTG 59.013 39.130 0.00 0.00 37.65 4.94
118 119 4.233789 GCTGCAATTTATTTGTTCCGTGA 58.766 39.130 0.00 0.00 37.65 4.35
119 120 4.864247 GCTGCAATTTATTTGTTCCGTGAT 59.136 37.500 0.00 0.00 37.65 3.06
120 121 5.004726 GCTGCAATTTATTTGTTCCGTGATC 59.995 40.000 0.00 0.00 37.65 2.92
121 122 6.266168 TGCAATTTATTTGTTCCGTGATCT 57.734 33.333 0.00 0.00 37.65 2.75
122 123 7.384439 TGCAATTTATTTGTTCCGTGATCTA 57.616 32.000 0.00 0.00 37.65 1.98
123 124 7.995289 TGCAATTTATTTGTTCCGTGATCTAT 58.005 30.769 0.00 0.00 37.65 1.98
124 125 8.465999 TGCAATTTATTTGTTCCGTGATCTATT 58.534 29.630 0.00 0.00 37.65 1.73
125 126 9.301153 GCAATTTATTTGTTCCGTGATCTATTT 57.699 29.630 0.00 0.00 37.65 1.40
133 134 9.706691 TTTGTTCCGTGATCTATTTATCCTATC 57.293 33.333 0.00 0.00 0.00 2.08
134 135 8.651589 TGTTCCGTGATCTATTTATCCTATCT 57.348 34.615 0.00 0.00 0.00 1.98
135 136 9.749340 TGTTCCGTGATCTATTTATCCTATCTA 57.251 33.333 0.00 0.00 0.00 1.98
137 138 8.749026 TCCGTGATCTATTTATCCTATCTACC 57.251 38.462 0.00 0.00 0.00 3.18
138 139 8.333984 TCCGTGATCTATTTATCCTATCTACCA 58.666 37.037 0.00 0.00 0.00 3.25
139 140 8.407064 CCGTGATCTATTTATCCTATCTACCAC 58.593 40.741 0.00 0.00 0.00 4.16
140 141 9.179909 CGTGATCTATTTATCCTATCTACCACT 57.820 37.037 0.00 0.00 0.00 4.00
149 150 9.496710 TTTATCCTATCTACCACTTTTACCTCA 57.503 33.333 0.00 0.00 0.00 3.86
150 151 7.989947 ATCCTATCTACCACTTTTACCTCAA 57.010 36.000 0.00 0.00 0.00 3.02
151 152 7.419711 TCCTATCTACCACTTTTACCTCAAG 57.580 40.000 0.00 0.00 0.00 3.02
152 153 6.958192 TCCTATCTACCACTTTTACCTCAAGT 59.042 38.462 0.00 0.00 34.67 3.16
153 154 7.456902 TCCTATCTACCACTTTTACCTCAAGTT 59.543 37.037 0.00 0.00 31.83 2.66
154 155 8.755977 CCTATCTACCACTTTTACCTCAAGTTA 58.244 37.037 0.00 0.00 31.83 2.24
158 159 9.280174 TCTACCACTTTTACCTCAAGTTATTTG 57.720 33.333 0.00 0.00 38.17 2.32
159 160 6.745116 ACCACTTTTACCTCAAGTTATTTGC 58.255 36.000 0.00 0.00 36.70 3.68
160 161 6.156519 CCACTTTTACCTCAAGTTATTTGCC 58.843 40.000 0.00 0.00 36.70 4.52
161 162 6.015434 CCACTTTTACCTCAAGTTATTTGCCT 60.015 38.462 0.00 0.00 36.70 4.75
162 163 7.175990 CCACTTTTACCTCAAGTTATTTGCCTA 59.824 37.037 0.00 0.00 36.70 3.93
163 164 8.739972 CACTTTTACCTCAAGTTATTTGCCTAT 58.260 33.333 0.00 0.00 36.70 2.57
164 165 8.957466 ACTTTTACCTCAAGTTATTTGCCTATC 58.043 33.333 0.00 0.00 36.70 2.08
165 166 9.178758 CTTTTACCTCAAGTTATTTGCCTATCT 57.821 33.333 0.00 0.00 36.70 1.98
166 167 9.528489 TTTTACCTCAAGTTATTTGCCTATCTT 57.472 29.630 0.00 0.00 36.70 2.40
167 168 8.506168 TTACCTCAAGTTATTTGCCTATCTTG 57.494 34.615 0.00 0.00 36.70 3.02
168 169 6.721318 ACCTCAAGTTATTTGCCTATCTTGA 58.279 36.000 0.00 0.00 36.10 3.02
169 170 6.825721 ACCTCAAGTTATTTGCCTATCTTGAG 59.174 38.462 19.34 19.34 45.11 3.02
170 171 7.256756 CTCAAGTTATTTGCCTATCTTGAGG 57.743 40.000 18.83 0.00 43.67 3.86
176 177 2.815308 CCTATCTTGAGGCGCCGT 59.185 61.111 23.20 9.79 0.00 5.68
177 178 2.038690 CCTATCTTGAGGCGCCGTA 58.961 57.895 23.20 11.68 0.00 4.02
178 179 0.318784 CCTATCTTGAGGCGCCGTAC 60.319 60.000 23.20 17.08 0.00 3.67
179 180 0.318784 CTATCTTGAGGCGCCGTACC 60.319 60.000 23.20 12.39 0.00 3.34
180 181 1.741327 TATCTTGAGGCGCCGTACCC 61.741 60.000 23.20 9.74 0.00 3.69
184 185 4.440127 GAGGCGCCGTACCCGAAA 62.440 66.667 23.20 0.00 35.63 3.46
185 186 4.446413 AGGCGCCGTACCCGAAAG 62.446 66.667 23.20 0.00 35.63 2.62
198 199 2.928416 CGAAAGGGACTGACAACCC 58.072 57.895 8.79 8.79 45.88 4.11
199 200 0.605589 CGAAAGGGACTGACAACCCC 60.606 60.000 12.18 8.35 46.64 4.95
204 205 2.963599 GGGACTGACAACCCCTTTAA 57.036 50.000 6.19 0.00 40.19 1.52
205 206 2.511659 GGGACTGACAACCCCTTTAAC 58.488 52.381 6.19 0.00 40.19 2.01
206 207 2.158579 GGGACTGACAACCCCTTTAACA 60.159 50.000 6.19 0.00 40.19 2.41
207 208 2.882761 GGACTGACAACCCCTTTAACAC 59.117 50.000 0.00 0.00 0.00 3.32
208 209 2.546789 GACTGACAACCCCTTTAACACG 59.453 50.000 0.00 0.00 0.00 4.49
209 210 2.092807 ACTGACAACCCCTTTAACACGT 60.093 45.455 0.00 0.00 0.00 4.49
210 211 2.546789 CTGACAACCCCTTTAACACGTC 59.453 50.000 0.00 0.00 0.00 4.34
211 212 2.093075 TGACAACCCCTTTAACACGTCA 60.093 45.455 0.00 0.00 0.00 4.35
212 213 2.546789 GACAACCCCTTTAACACGTCAG 59.453 50.000 0.00 0.00 0.00 3.51
213 214 1.877443 CAACCCCTTTAACACGTCAGG 59.123 52.381 0.00 0.00 0.00 3.86
214 215 1.134228 ACCCCTTTAACACGTCAGGT 58.866 50.000 0.00 0.00 0.00 4.00
215 216 1.491754 ACCCCTTTAACACGTCAGGTT 59.508 47.619 0.00 0.00 0.00 3.50
216 217 1.877443 CCCCTTTAACACGTCAGGTTG 59.123 52.381 0.35 0.00 0.00 3.77
217 218 1.265905 CCCTTTAACACGTCAGGTTGC 59.734 52.381 0.35 0.00 0.00 4.17
218 219 1.070175 CCTTTAACACGTCAGGTTGCG 60.070 52.381 0.35 0.00 0.00 4.85
219 220 1.862201 CTTTAACACGTCAGGTTGCGA 59.138 47.619 0.35 0.00 0.00 5.10
220 221 1.493772 TTAACACGTCAGGTTGCGAG 58.506 50.000 0.35 0.00 0.00 5.03
221 222 0.386476 TAACACGTCAGGTTGCGAGT 59.614 50.000 0.35 0.00 33.77 4.18
222 223 0.386476 AACACGTCAGGTTGCGAGTA 59.614 50.000 0.00 0.00 32.25 2.59
223 224 0.601558 ACACGTCAGGTTGCGAGTAT 59.398 50.000 0.00 0.00 30.91 2.12
224 225 1.000506 ACACGTCAGGTTGCGAGTATT 59.999 47.619 0.00 0.00 30.91 1.89
225 226 2.066262 CACGTCAGGTTGCGAGTATTT 58.934 47.619 0.00 0.00 0.00 1.40
226 227 2.066262 ACGTCAGGTTGCGAGTATTTG 58.934 47.619 0.00 0.00 0.00 2.32
227 228 2.066262 CGTCAGGTTGCGAGTATTTGT 58.934 47.619 0.00 0.00 0.00 2.83
228 229 2.478894 CGTCAGGTTGCGAGTATTTGTT 59.521 45.455 0.00 0.00 0.00 2.83
229 230 3.676172 CGTCAGGTTGCGAGTATTTGTTA 59.324 43.478 0.00 0.00 0.00 2.41
230 231 4.328983 CGTCAGGTTGCGAGTATTTGTTAT 59.671 41.667 0.00 0.00 0.00 1.89
231 232 5.163893 CGTCAGGTTGCGAGTATTTGTTATT 60.164 40.000 0.00 0.00 0.00 1.40
232 233 6.608610 GTCAGGTTGCGAGTATTTGTTATTT 58.391 36.000 0.00 0.00 0.00 1.40
233 234 6.523201 GTCAGGTTGCGAGTATTTGTTATTTG 59.477 38.462 0.00 0.00 0.00 2.32
234 235 6.205853 TCAGGTTGCGAGTATTTGTTATTTGT 59.794 34.615 0.00 0.00 0.00 2.83
235 236 6.305399 CAGGTTGCGAGTATTTGTTATTTGTG 59.695 38.462 0.00 0.00 0.00 3.33
236 237 6.016610 AGGTTGCGAGTATTTGTTATTTGTGT 60.017 34.615 0.00 0.00 0.00 3.72
237 238 6.087555 GGTTGCGAGTATTTGTTATTTGTGTG 59.912 38.462 0.00 0.00 0.00 3.82
238 239 5.150683 TGCGAGTATTTGTTATTTGTGTGC 58.849 37.500 0.00 0.00 0.00 4.57
239 240 5.150683 GCGAGTATTTGTTATTTGTGTGCA 58.849 37.500 0.00 0.00 0.00 4.57
240 241 5.283717 GCGAGTATTTGTTATTTGTGTGCAG 59.716 40.000 0.00 0.00 0.00 4.41
241 242 5.794945 CGAGTATTTGTTATTTGTGTGCAGG 59.205 40.000 0.00 0.00 0.00 4.85
242 243 6.567701 CGAGTATTTGTTATTTGTGTGCAGGT 60.568 38.462 0.00 0.00 0.00 4.00
243 244 6.446318 AGTATTTGTTATTTGTGTGCAGGTG 58.554 36.000 0.00 0.00 0.00 4.00
244 245 4.727507 TTTGTTATTTGTGTGCAGGTGT 57.272 36.364 0.00 0.00 0.00 4.16
245 246 4.727507 TTGTTATTTGTGTGCAGGTGTT 57.272 36.364 0.00 0.00 0.00 3.32
246 247 4.039151 TGTTATTTGTGTGCAGGTGTTG 57.961 40.909 0.00 0.00 0.00 3.33
247 248 3.445450 TGTTATTTGTGTGCAGGTGTTGT 59.555 39.130 0.00 0.00 0.00 3.32
248 249 4.081972 TGTTATTTGTGTGCAGGTGTTGTT 60.082 37.500 0.00 0.00 0.00 2.83
249 250 3.608316 ATTTGTGTGCAGGTGTTGTTT 57.392 38.095 0.00 0.00 0.00 2.83
250 251 4.727507 ATTTGTGTGCAGGTGTTGTTTA 57.272 36.364 0.00 0.00 0.00 2.01
251 252 3.495670 TTGTGTGCAGGTGTTGTTTAC 57.504 42.857 0.00 0.00 0.00 2.01
252 253 1.398739 TGTGTGCAGGTGTTGTTTACG 59.601 47.619 0.00 0.00 0.00 3.18
253 254 1.399089 GTGTGCAGGTGTTGTTTACGT 59.601 47.619 0.00 0.00 0.00 3.57
254 255 1.398739 TGTGCAGGTGTTGTTTACGTG 59.601 47.619 0.00 0.00 37.09 4.49
255 256 1.018148 TGCAGGTGTTGTTTACGTGG 58.982 50.000 0.00 0.00 35.21 4.94
256 257 1.018910 GCAGGTGTTGTTTACGTGGT 58.981 50.000 0.00 0.00 35.21 4.16
257 258 1.268335 GCAGGTGTTGTTTACGTGGTG 60.268 52.381 0.00 0.00 35.21 4.17
258 259 2.011222 CAGGTGTTGTTTACGTGGTGT 58.989 47.619 0.00 0.00 32.07 4.16
259 260 3.196463 CAGGTGTTGTTTACGTGGTGTA 58.804 45.455 0.00 0.00 32.07 2.90
260 261 3.622163 CAGGTGTTGTTTACGTGGTGTAA 59.378 43.478 0.00 0.00 41.25 2.41
261 262 3.872771 AGGTGTTGTTTACGTGGTGTAAG 59.127 43.478 0.00 0.00 43.63 2.34
262 263 3.002553 GGTGTTGTTTACGTGGTGTAAGG 59.997 47.826 0.00 0.00 43.63 2.69
263 264 3.870419 GTGTTGTTTACGTGGTGTAAGGA 59.130 43.478 0.00 0.00 43.63 3.36
264 265 4.025480 GTGTTGTTTACGTGGTGTAAGGAG 60.025 45.833 0.00 0.00 43.63 3.69
265 266 3.389925 TGTTTACGTGGTGTAAGGAGG 57.610 47.619 0.00 0.00 43.63 4.30
266 267 2.699846 TGTTTACGTGGTGTAAGGAGGT 59.300 45.455 0.00 0.00 43.63 3.85
267 268 3.134442 TGTTTACGTGGTGTAAGGAGGTT 59.866 43.478 0.00 0.00 43.63 3.50
268 269 3.665745 TTACGTGGTGTAAGGAGGTTC 57.334 47.619 0.00 0.00 38.12 3.62
269 270 1.713297 ACGTGGTGTAAGGAGGTTCT 58.287 50.000 0.00 0.00 0.00 3.01
270 271 1.617357 ACGTGGTGTAAGGAGGTTCTC 59.383 52.381 0.00 0.00 0.00 2.87
281 282 3.336138 GGAGGTTCTCCTACTGGTTTG 57.664 52.381 6.70 0.00 46.41 2.93
282 283 2.904434 GGAGGTTCTCCTACTGGTTTGA 59.096 50.000 6.70 0.00 46.41 2.69
283 284 3.519913 GGAGGTTCTCCTACTGGTTTGAT 59.480 47.826 6.70 0.00 46.41 2.57
284 285 4.715297 GGAGGTTCTCCTACTGGTTTGATA 59.285 45.833 6.70 0.00 46.41 2.15
285 286 5.189145 GGAGGTTCTCCTACTGGTTTGATAA 59.811 44.000 6.70 0.00 46.41 1.75
286 287 6.051179 AGGTTCTCCTACTGGTTTGATAAC 57.949 41.667 0.00 0.00 43.12 1.89
287 288 5.045797 AGGTTCTCCTACTGGTTTGATAACC 60.046 44.000 0.13 0.13 46.80 2.85
288 289 7.213227 AGGTTCTCCTACTGGTTTGATAACCT 61.213 42.308 8.39 0.00 46.77 3.50
289 290 8.633672 AGGTTCTCCTACTGGTTTGATAACCTT 61.634 40.741 8.39 0.00 46.77 3.50
300 301 6.183309 GTTTGATAACCTTGGTCTCATCAC 57.817 41.667 9.67 5.79 0.00 3.06
301 302 5.762179 TTGATAACCTTGGTCTCATCACT 57.238 39.130 9.67 0.00 0.00 3.41
302 303 5.089970 TGATAACCTTGGTCTCATCACTG 57.910 43.478 0.00 0.00 0.00 3.66
303 304 4.777366 TGATAACCTTGGTCTCATCACTGA 59.223 41.667 0.00 0.00 0.00 3.41
318 319 7.827819 TCATCACTGAGAAAAATACTTACCG 57.172 36.000 0.00 0.00 0.00 4.02
319 320 7.383687 TCATCACTGAGAAAAATACTTACCGT 58.616 34.615 0.00 0.00 0.00 4.83
320 321 7.544566 TCATCACTGAGAAAAATACTTACCGTC 59.455 37.037 0.00 0.00 0.00 4.79
321 322 5.860182 TCACTGAGAAAAATACTTACCGTCG 59.140 40.000 0.00 0.00 0.00 5.12
322 323 4.624452 ACTGAGAAAAATACTTACCGTCGC 59.376 41.667 0.00 0.00 0.00 5.19
323 324 4.813027 TGAGAAAAATACTTACCGTCGCT 58.187 39.130 0.00 0.00 0.00 4.93
324 325 5.953183 TGAGAAAAATACTTACCGTCGCTA 58.047 37.500 0.00 0.00 0.00 4.26
325 326 6.567050 TGAGAAAAATACTTACCGTCGCTAT 58.433 36.000 0.00 0.00 0.00 2.97
326 327 7.706159 TGAGAAAAATACTTACCGTCGCTATA 58.294 34.615 0.00 0.00 0.00 1.31
327 328 7.645340 TGAGAAAAATACTTACCGTCGCTATAC 59.355 37.037 0.00 0.00 0.00 1.47
328 329 7.710896 AGAAAAATACTTACCGTCGCTATACT 58.289 34.615 0.00 0.00 0.00 2.12
329 330 7.646922 AGAAAAATACTTACCGTCGCTATACTG 59.353 37.037 0.00 0.00 0.00 2.74
330 331 2.770699 ACTTACCGTCGCTATACTGC 57.229 50.000 0.00 0.00 0.00 4.40
331 332 2.019249 ACTTACCGTCGCTATACTGCA 58.981 47.619 0.00 0.00 0.00 4.41
332 333 2.621998 ACTTACCGTCGCTATACTGCAT 59.378 45.455 0.00 0.00 0.00 3.96
333 334 2.983402 TACCGTCGCTATACTGCATC 57.017 50.000 0.00 0.00 0.00 3.91
334 335 1.029681 ACCGTCGCTATACTGCATCA 58.970 50.000 0.00 0.00 0.00 3.07
335 336 1.613925 ACCGTCGCTATACTGCATCAT 59.386 47.619 0.00 0.00 0.00 2.45
336 337 2.254459 CCGTCGCTATACTGCATCATC 58.746 52.381 0.00 0.00 0.00 2.92
337 338 2.254459 CGTCGCTATACTGCATCATCC 58.746 52.381 0.00 0.00 0.00 3.51
338 339 2.611518 GTCGCTATACTGCATCATCCC 58.388 52.381 0.00 0.00 0.00 3.85
339 340 2.232452 GTCGCTATACTGCATCATCCCT 59.768 50.000 0.00 0.00 0.00 4.20
340 341 2.899900 TCGCTATACTGCATCATCCCTT 59.100 45.455 0.00 0.00 0.00 3.95
341 342 3.324846 TCGCTATACTGCATCATCCCTTT 59.675 43.478 0.00 0.00 0.00 3.11
342 343 4.067896 CGCTATACTGCATCATCCCTTTT 58.932 43.478 0.00 0.00 0.00 2.27
343 344 4.153117 CGCTATACTGCATCATCCCTTTTC 59.847 45.833 0.00 0.00 0.00 2.29
344 345 5.312079 GCTATACTGCATCATCCCTTTTCT 58.688 41.667 0.00 0.00 0.00 2.52
345 346 5.767168 GCTATACTGCATCATCCCTTTTCTT 59.233 40.000 0.00 0.00 0.00 2.52
346 347 6.264067 GCTATACTGCATCATCCCTTTTCTTT 59.736 38.462 0.00 0.00 0.00 2.52
347 348 4.796038 ACTGCATCATCCCTTTTCTTTG 57.204 40.909 0.00 0.00 0.00 2.77
348 349 3.512724 ACTGCATCATCCCTTTTCTTTGG 59.487 43.478 0.00 0.00 0.00 3.28
349 350 3.765511 CTGCATCATCCCTTTTCTTTGGA 59.234 43.478 0.00 0.00 0.00 3.53
350 351 4.158786 TGCATCATCCCTTTTCTTTGGAA 58.841 39.130 0.00 0.00 0.00 3.53
351 352 4.592351 TGCATCATCCCTTTTCTTTGGAAA 59.408 37.500 0.00 0.00 39.38 3.13
352 353 5.071519 TGCATCATCCCTTTTCTTTGGAAAA 59.928 36.000 4.28 4.28 45.62 2.29
353 354 5.997129 GCATCATCCCTTTTCTTTGGAAAAA 59.003 36.000 5.61 0.00 46.57 1.94
354 355 6.656270 GCATCATCCCTTTTCTTTGGAAAAAT 59.344 34.615 5.61 0.00 46.57 1.82
355 356 7.823799 GCATCATCCCTTTTCTTTGGAAAAATA 59.176 33.333 5.61 0.00 46.57 1.40
356 357 9.895138 CATCATCCCTTTTCTTTGGAAAAATAT 57.105 29.630 5.61 0.00 46.57 1.28
358 359 8.250332 TCATCCCTTTTCTTTGGAAAAATATCG 58.750 33.333 5.61 0.00 46.57 2.92
359 360 7.768807 TCCCTTTTCTTTGGAAAAATATCGA 57.231 32.000 5.61 0.00 46.57 3.59
360 361 7.599171 TCCCTTTTCTTTGGAAAAATATCGAC 58.401 34.615 0.00 0.00 46.57 4.20
361 362 7.231722 TCCCTTTTCTTTGGAAAAATATCGACA 59.768 33.333 0.00 0.00 46.57 4.35
362 363 8.034804 CCCTTTTCTTTGGAAAAATATCGACAT 58.965 33.333 0.00 0.00 46.57 3.06
368 369 9.667107 TCTTTGGAAAAATATCGACATAGTTCT 57.333 29.630 0.00 0.00 0.00 3.01
371 372 8.589335 TGGAAAAATATCGACATAGTTCTAGC 57.411 34.615 0.00 0.00 0.00 3.42
372 373 8.201464 TGGAAAAATATCGACATAGTTCTAGCA 58.799 33.333 0.00 0.00 0.00 3.49
373 374 8.704234 GGAAAAATATCGACATAGTTCTAGCAG 58.296 37.037 0.00 0.00 0.00 4.24
374 375 9.464714 GAAAAATATCGACATAGTTCTAGCAGA 57.535 33.333 0.00 0.00 0.00 4.26
375 376 8.804688 AAAATATCGACATAGTTCTAGCAGAC 57.195 34.615 0.00 0.00 0.00 3.51
376 377 7.511959 AATATCGACATAGTTCTAGCAGACA 57.488 36.000 0.00 0.00 0.00 3.41
377 378 7.695480 ATATCGACATAGTTCTAGCAGACAT 57.305 36.000 0.00 0.00 0.00 3.06
378 379 5.425577 TCGACATAGTTCTAGCAGACATC 57.574 43.478 0.00 0.00 0.00 3.06
379 380 4.881850 TCGACATAGTTCTAGCAGACATCA 59.118 41.667 0.00 0.00 0.00 3.07
380 381 5.008118 TCGACATAGTTCTAGCAGACATCAG 59.992 44.000 0.00 0.00 0.00 2.90
381 382 4.942852 ACATAGTTCTAGCAGACATCAGC 58.057 43.478 0.00 0.00 0.00 4.26
382 383 2.575694 AGTTCTAGCAGACATCAGCG 57.424 50.000 0.00 0.00 33.30 5.18
383 384 0.926846 GTTCTAGCAGACATCAGCGC 59.073 55.000 0.00 0.00 33.30 5.92
384 385 0.179100 TTCTAGCAGACATCAGCGCC 60.179 55.000 2.29 0.00 33.30 6.53
385 386 1.593750 CTAGCAGACATCAGCGCCC 60.594 63.158 2.29 0.00 33.30 6.13
386 387 2.025767 CTAGCAGACATCAGCGCCCT 62.026 60.000 2.29 0.00 33.30 5.19
387 388 2.021068 TAGCAGACATCAGCGCCCTC 62.021 60.000 2.29 0.00 33.30 4.30
388 389 2.898738 CAGACATCAGCGCCCTCT 59.101 61.111 2.29 0.00 0.00 3.69
389 390 1.521010 CAGACATCAGCGCCCTCTG 60.521 63.158 2.29 3.31 35.46 3.35
390 391 2.202987 GACATCAGCGCCCTCTGG 60.203 66.667 2.29 0.00 34.91 3.86
412 413 4.006357 GGTACGGGTGGCCGACAA 62.006 66.667 0.00 0.00 36.94 3.18
413 414 2.739671 GTACGGGTGGCCGACAAC 60.740 66.667 0.00 0.00 36.94 3.32
474 475 2.602267 ACCACGACGGGTCCATCA 60.602 61.111 0.00 0.00 35.96 3.07
475 476 1.987855 ACCACGACGGGTCCATCAT 60.988 57.895 0.00 0.00 35.96 2.45
476 477 1.227263 CCACGACGGGTCCATCATC 60.227 63.158 0.00 0.00 0.00 2.92
477 478 1.588932 CACGACGGGTCCATCATCG 60.589 63.158 0.00 0.00 38.71 3.84
478 479 1.751544 ACGACGGGTCCATCATCGA 60.752 57.895 0.00 0.00 36.64 3.59
479 480 1.299165 CGACGGGTCCATCATCGAC 60.299 63.158 0.00 0.00 34.77 4.20
484 485 3.669354 GGTCCATCATCGACCTCAC 57.331 57.895 0.00 0.00 45.41 3.51
485 486 1.115467 GGTCCATCATCGACCTCACT 58.885 55.000 0.00 0.00 45.41 3.41
486 487 1.482593 GGTCCATCATCGACCTCACTT 59.517 52.381 0.00 0.00 45.41 3.16
487 488 2.482142 GGTCCATCATCGACCTCACTTC 60.482 54.545 0.00 0.00 45.41 3.01
488 489 1.405463 TCCATCATCGACCTCACTTCG 59.595 52.381 0.00 0.00 37.85 3.79
492 493 3.260931 TCGACCTCACTTCGACCG 58.739 61.111 0.00 0.00 40.51 4.79
493 494 1.301953 TCGACCTCACTTCGACCGA 60.302 57.895 0.00 0.00 40.51 4.69
494 495 1.154263 CGACCTCACTTCGACCGAC 60.154 63.158 0.00 0.00 38.85 4.79
495 496 1.154263 GACCTCACTTCGACCGACG 60.154 63.158 0.00 0.00 44.09 5.12
503 504 4.631773 TCGACCGACGAGGAAGAT 57.368 55.556 8.56 0.00 46.45 2.40
504 505 3.766644 TCGACCGACGAGGAAGATA 57.233 52.632 8.56 0.00 46.45 1.98
505 506 1.579698 TCGACCGACGAGGAAGATAG 58.420 55.000 8.56 0.00 46.45 2.08
506 507 0.587285 CGACCGACGAGGAAGATAGG 59.413 60.000 8.56 0.00 45.00 2.57
507 508 0.953003 GACCGACGAGGAAGATAGGG 59.047 60.000 8.56 0.00 45.00 3.53
508 509 1.108132 ACCGACGAGGAAGATAGGGC 61.108 60.000 8.56 0.00 45.00 5.19
509 510 1.107538 CCGACGAGGAAGATAGGGCA 61.108 60.000 0.00 0.00 45.00 5.36
510 511 0.962489 CGACGAGGAAGATAGGGCAT 59.038 55.000 0.00 0.00 0.00 4.40
511 512 1.336332 CGACGAGGAAGATAGGGCATG 60.336 57.143 0.00 0.00 0.00 4.06
512 513 1.001406 GACGAGGAAGATAGGGCATGG 59.999 57.143 0.00 0.00 0.00 3.66
513 514 0.322975 CGAGGAAGATAGGGCATGGG 59.677 60.000 0.00 0.00 0.00 4.00
514 515 1.734655 GAGGAAGATAGGGCATGGGA 58.265 55.000 0.00 0.00 0.00 4.37
515 516 1.627834 GAGGAAGATAGGGCATGGGAG 59.372 57.143 0.00 0.00 0.00 4.30
516 517 1.224120 AGGAAGATAGGGCATGGGAGA 59.776 52.381 0.00 0.00 0.00 3.71
517 518 1.349357 GGAAGATAGGGCATGGGAGAC 59.651 57.143 0.00 0.00 0.00 3.36
518 519 1.001406 GAAGATAGGGCATGGGAGACG 59.999 57.143 0.00 0.00 0.00 4.18
519 520 0.188587 AGATAGGGCATGGGAGACGA 59.811 55.000 0.00 0.00 0.00 4.20
520 521 0.318762 GATAGGGCATGGGAGACGAC 59.681 60.000 0.00 0.00 0.00 4.34
521 522 1.122019 ATAGGGCATGGGAGACGACC 61.122 60.000 0.00 0.00 0.00 4.79
522 523 4.530857 GGGCATGGGAGACGACCG 62.531 72.222 0.00 0.00 0.00 4.79
530 531 4.415332 GAGACGACCGCGCCTTGA 62.415 66.667 0.00 0.00 42.48 3.02
531 532 4.421479 AGACGACCGCGCCTTGAG 62.421 66.667 0.00 0.00 42.48 3.02
532 533 4.719369 GACGACCGCGCCTTGAGT 62.719 66.667 0.00 0.00 42.48 3.41
533 534 3.332493 GACGACCGCGCCTTGAGTA 62.332 63.158 0.00 0.00 42.48 2.59
534 535 2.879462 CGACCGCGCCTTGAGTAC 60.879 66.667 0.00 0.00 0.00 2.73
535 536 2.508663 GACCGCGCCTTGAGTACC 60.509 66.667 0.00 0.00 0.00 3.34
536 537 3.291101 GACCGCGCCTTGAGTACCA 62.291 63.158 0.00 0.00 0.00 3.25
537 538 2.186903 CCGCGCCTTGAGTACCAT 59.813 61.111 0.00 0.00 0.00 3.55
538 539 2.173669 CCGCGCCTTGAGTACCATG 61.174 63.158 0.00 0.00 0.00 3.66
539 540 1.153647 CGCGCCTTGAGTACCATGA 60.154 57.895 0.00 0.00 0.00 3.07
540 541 1.148157 CGCGCCTTGAGTACCATGAG 61.148 60.000 0.00 0.00 0.00 2.90
541 542 1.432270 GCGCCTTGAGTACCATGAGC 61.432 60.000 0.00 0.00 0.00 4.26
542 543 0.811616 CGCCTTGAGTACCATGAGCC 60.812 60.000 0.00 0.00 0.00 4.70
543 544 0.811616 GCCTTGAGTACCATGAGCCG 60.812 60.000 0.00 0.00 0.00 5.52
544 545 0.179073 CCTTGAGTACCATGAGCCGG 60.179 60.000 0.00 0.00 0.00 6.13
545 546 0.537188 CTTGAGTACCATGAGCCGGT 59.463 55.000 1.90 0.00 40.73 5.28
546 547 0.249120 TTGAGTACCATGAGCCGGTG 59.751 55.000 1.90 0.00 37.33 4.94
547 548 1.521681 GAGTACCATGAGCCGGTGC 60.522 63.158 1.90 0.00 39.24 5.01
548 549 2.890474 GTACCATGAGCCGGTGCG 60.890 66.667 1.90 0.00 44.33 5.34
549 550 3.387091 TACCATGAGCCGGTGCGT 61.387 61.111 1.90 0.00 44.33 5.24
550 551 3.657448 TACCATGAGCCGGTGCGTG 62.657 63.158 1.90 7.12 44.33 5.34
552 553 3.049674 CATGAGCCGGTGCGTGTT 61.050 61.111 1.90 0.00 44.33 3.32
553 554 2.742372 ATGAGCCGGTGCGTGTTC 60.742 61.111 1.90 0.00 44.33 3.18
554 555 4.980805 TGAGCCGGTGCGTGTTCC 62.981 66.667 1.90 0.00 44.33 3.62
555 556 4.681978 GAGCCGGTGCGTGTTCCT 62.682 66.667 1.90 0.00 44.33 3.36
556 557 4.250305 AGCCGGTGCGTGTTCCTT 62.250 61.111 1.90 0.00 44.33 3.36
557 558 4.025401 GCCGGTGCGTGTTCCTTG 62.025 66.667 1.90 0.00 0.00 3.61
558 559 2.590575 CCGGTGCGTGTTCCTTGT 60.591 61.111 0.00 0.00 0.00 3.16
559 560 2.604174 CCGGTGCGTGTTCCTTGTC 61.604 63.158 0.00 0.00 0.00 3.18
560 561 2.604174 CGGTGCGTGTTCCTTGTCC 61.604 63.158 0.00 0.00 0.00 4.02
561 562 1.227853 GGTGCGTGTTCCTTGTCCT 60.228 57.895 0.00 0.00 0.00 3.85
562 563 0.034337 GGTGCGTGTTCCTTGTCCTA 59.966 55.000 0.00 0.00 0.00 2.94
563 564 1.145803 GTGCGTGTTCCTTGTCCTAC 58.854 55.000 0.00 0.00 0.00 3.18
564 565 1.045407 TGCGTGTTCCTTGTCCTACT 58.955 50.000 0.00 0.00 0.00 2.57
565 566 1.000506 TGCGTGTTCCTTGTCCTACTC 59.999 52.381 0.00 0.00 0.00 2.59
566 567 1.272769 GCGTGTTCCTTGTCCTACTCT 59.727 52.381 0.00 0.00 0.00 3.24
567 568 2.490903 GCGTGTTCCTTGTCCTACTCTA 59.509 50.000 0.00 0.00 0.00 2.43
568 569 3.672781 GCGTGTTCCTTGTCCTACTCTAC 60.673 52.174 0.00 0.00 0.00 2.59
569 570 3.757493 CGTGTTCCTTGTCCTACTCTACT 59.243 47.826 0.00 0.00 0.00 2.57
570 571 4.217983 CGTGTTCCTTGTCCTACTCTACTT 59.782 45.833 0.00 0.00 0.00 2.24
571 572 5.619533 CGTGTTCCTTGTCCTACTCTACTTC 60.620 48.000 0.00 0.00 0.00 3.01
572 573 4.458295 TGTTCCTTGTCCTACTCTACTTCG 59.542 45.833 0.00 0.00 0.00 3.79
573 574 3.015327 TCCTTGTCCTACTCTACTTCGC 58.985 50.000 0.00 0.00 0.00 4.70
574 575 3.018149 CCTTGTCCTACTCTACTTCGCT 58.982 50.000 0.00 0.00 0.00 4.93
575 576 3.181495 CCTTGTCCTACTCTACTTCGCTG 60.181 52.174 0.00 0.00 0.00 5.18
576 577 2.366533 TGTCCTACTCTACTTCGCTGG 58.633 52.381 0.00 0.00 0.00 4.85
577 578 1.065851 GTCCTACTCTACTTCGCTGGC 59.934 57.143 0.00 0.00 0.00 4.85
578 579 1.103803 CCTACTCTACTTCGCTGGCA 58.896 55.000 0.00 0.00 0.00 4.92
579 580 1.476891 CCTACTCTACTTCGCTGGCAA 59.523 52.381 0.00 0.00 0.00 4.52
580 581 2.531206 CTACTCTACTTCGCTGGCAAC 58.469 52.381 0.00 0.00 0.00 4.17
581 582 0.037232 ACTCTACTTCGCTGGCAACC 60.037 55.000 0.00 0.00 0.00 3.77
582 583 1.078759 CTCTACTTCGCTGGCAACCG 61.079 60.000 1.23 1.23 0.00 4.44
583 584 2.740714 CTACTTCGCTGGCAACCGC 61.741 63.158 2.68 0.00 37.44 5.68
584 585 3.523087 TACTTCGCTGGCAACCGCA 62.523 57.895 2.68 0.00 41.24 5.69
585 586 4.389576 CTTCGCTGGCAACCGCAC 62.390 66.667 2.68 0.00 41.24 5.34
589 590 4.645921 GCTGGCAACCGCACCAAC 62.646 66.667 0.00 0.00 41.24 3.77
590 591 3.215568 CTGGCAACCGCACCAACA 61.216 61.111 0.00 0.00 41.24 3.33
591 592 3.483235 CTGGCAACCGCACCAACAC 62.483 63.158 0.00 0.00 41.24 3.32
592 593 3.216292 GGCAACCGCACCAACACT 61.216 61.111 0.00 0.00 41.24 3.55
593 594 2.781158 GGCAACCGCACCAACACTT 61.781 57.895 0.00 0.00 41.24 3.16
594 595 1.588667 GCAACCGCACCAACACTTG 60.589 57.895 0.00 0.00 38.36 3.16
605 606 2.185004 CAACACTTGGAGGGGTGTAG 57.815 55.000 0.00 0.00 44.54 2.74
606 607 0.400594 AACACTTGGAGGGGTGTAGC 59.599 55.000 0.00 0.00 44.54 3.58
607 608 1.299976 CACTTGGAGGGGTGTAGCC 59.700 63.158 0.00 0.00 0.00 3.93
608 609 1.151899 ACTTGGAGGGGTGTAGCCA 60.152 57.895 2.20 0.00 39.65 4.75
609 610 1.201429 ACTTGGAGGGGTGTAGCCAG 61.201 60.000 2.20 0.00 39.65 4.85
610 611 2.543067 CTTGGAGGGGTGTAGCCAGC 62.543 65.000 2.20 0.00 39.65 4.85
616 617 4.065281 GGTGTAGCCAGCCGTCGT 62.065 66.667 0.00 0.00 37.17 4.34
617 618 2.703798 GGTGTAGCCAGCCGTCGTA 61.704 63.158 0.00 0.00 37.17 3.43
618 619 1.515736 GTGTAGCCAGCCGTCGTAC 60.516 63.158 0.00 0.00 0.00 3.67
619 620 1.972752 TGTAGCCAGCCGTCGTACA 60.973 57.895 0.00 0.00 0.00 2.90
620 621 1.317431 TGTAGCCAGCCGTCGTACAT 61.317 55.000 0.00 0.00 0.00 2.29
621 622 0.664761 GTAGCCAGCCGTCGTACATA 59.335 55.000 0.00 0.00 0.00 2.29
622 623 0.949397 TAGCCAGCCGTCGTACATAG 59.051 55.000 0.00 0.00 0.00 2.23
623 624 1.299926 GCCAGCCGTCGTACATAGG 60.300 63.158 0.00 0.00 0.00 2.57
626 627 4.320971 GCCGTCGTACATAGGCTG 57.679 61.111 13.30 0.00 45.67 4.85
627 628 1.731700 GCCGTCGTACATAGGCTGA 59.268 57.895 13.30 0.00 45.67 4.26
628 629 0.594284 GCCGTCGTACATAGGCTGAC 60.594 60.000 13.30 0.00 45.67 3.51
629 630 3.144300 CGTCGTACATAGGCTGACG 57.856 57.895 8.16 8.16 45.06 4.35
630 631 0.316772 CGTCGTACATAGGCTGACGG 60.317 60.000 13.19 0.00 46.19 4.79
631 632 0.594284 GTCGTACATAGGCTGACGGC 60.594 60.000 0.00 0.00 40.90 5.68
632 633 1.657487 CGTACATAGGCTGACGGCG 60.657 63.158 4.80 4.80 42.94 6.46
633 634 1.949631 GTACATAGGCTGACGGCGC 60.950 63.158 6.90 0.00 42.94 6.53
634 635 2.125326 TACATAGGCTGACGGCGCT 61.125 57.895 6.90 0.00 42.94 5.92
635 636 2.349969 TACATAGGCTGACGGCGCTG 62.350 60.000 16.39 16.39 42.94 5.18
636 637 3.461773 ATAGGCTGACGGCGCTGT 61.462 61.111 24.62 24.62 42.94 4.40
637 638 2.125326 ATAGGCTGACGGCGCTGTA 61.125 57.895 24.40 5.66 42.94 2.74
638 639 1.464376 ATAGGCTGACGGCGCTGTAT 61.464 55.000 24.40 8.17 42.94 2.29
639 640 0.820482 TAGGCTGACGGCGCTGTATA 60.820 55.000 24.40 13.69 42.94 1.47
640 641 1.661821 GGCTGACGGCGCTGTATAG 60.662 63.158 24.40 23.11 42.94 1.31
641 642 2.303676 GCTGACGGCGCTGTATAGC 61.304 63.158 30.40 30.40 46.62 2.97
675 676 2.543861 CCATGCTCTGCTGATGAATTGC 60.544 50.000 0.00 0.00 0.00 3.56
692 695 1.668826 TGCCTCCCATATGATACCCC 58.331 55.000 3.65 0.00 0.00 4.95
696 699 0.981183 TCCCATATGATACCCCGTGC 59.019 55.000 3.65 0.00 0.00 5.34
699 702 2.771943 CCCATATGATACCCCGTGCTAT 59.228 50.000 3.65 0.00 0.00 2.97
712 715 1.341209 CGTGCTATGAGGAGTGCCATA 59.659 52.381 0.00 0.00 36.29 2.74
713 716 2.760374 GTGCTATGAGGAGTGCCATAC 58.240 52.381 0.00 0.00 36.29 2.39
714 717 2.366916 GTGCTATGAGGAGTGCCATACT 59.633 50.000 0.00 0.00 44.02 2.12
715 718 3.574396 GTGCTATGAGGAGTGCCATACTA 59.426 47.826 0.00 0.00 40.53 1.82
716 719 4.039245 GTGCTATGAGGAGTGCCATACTAA 59.961 45.833 0.00 0.00 40.53 2.24
717 720 4.653801 TGCTATGAGGAGTGCCATACTAAA 59.346 41.667 0.00 0.00 40.53 1.85
718 721 5.130311 TGCTATGAGGAGTGCCATACTAAAA 59.870 40.000 0.00 0.00 40.53 1.52
719 722 5.698545 GCTATGAGGAGTGCCATACTAAAAG 59.301 44.000 0.00 0.00 40.53 2.27
720 723 5.957771 ATGAGGAGTGCCATACTAAAAGA 57.042 39.130 0.00 0.00 40.53 2.52
721 724 5.755409 TGAGGAGTGCCATACTAAAAGAA 57.245 39.130 0.00 0.00 40.53 2.52
722 725 6.121776 TGAGGAGTGCCATACTAAAAGAAA 57.878 37.500 0.00 0.00 40.53 2.52
723 726 6.539173 TGAGGAGTGCCATACTAAAAGAAAA 58.461 36.000 0.00 0.00 40.53 2.29
724 727 7.001674 TGAGGAGTGCCATACTAAAAGAAAAA 58.998 34.615 0.00 0.00 40.53 1.94
725 728 7.040686 TGAGGAGTGCCATACTAAAAGAAAAAC 60.041 37.037 0.00 0.00 40.53 2.43
726 729 6.208797 AGGAGTGCCATACTAAAAGAAAAACC 59.791 38.462 0.00 0.00 40.53 3.27
727 730 6.009115 AGTGCCATACTAAAAGAAAAACCG 57.991 37.500 0.00 0.00 38.04 4.44
728 731 5.533528 AGTGCCATACTAAAAGAAAAACCGT 59.466 36.000 0.00 0.00 38.04 4.83
729 732 6.711645 AGTGCCATACTAAAAGAAAAACCGTA 59.288 34.615 0.00 0.00 38.04 4.02
869 873 3.819877 AACCCGTGTGCGTCTTCCC 62.820 63.158 0.00 0.00 36.15 3.97
880 887 1.247567 CGTCTTCCCAACAAAGGCAT 58.752 50.000 0.00 0.00 0.00 4.40
915 922 2.780693 CCTCCCACTCCTCTCCCA 59.219 66.667 0.00 0.00 0.00 4.37
943 952 2.291346 CCCGAAAATACTTTGACCCCCT 60.291 50.000 0.00 0.00 0.00 4.79
975 984 2.357034 GCTCTCCGCGTGGACAAA 60.357 61.111 15.21 1.51 40.17 2.83
976 985 2.383527 GCTCTCCGCGTGGACAAAG 61.384 63.158 15.21 12.75 40.17 2.77
977 986 1.289066 CTCTCCGCGTGGACAAAGA 59.711 57.895 15.21 9.10 40.17 2.52
978 987 0.734253 CTCTCCGCGTGGACAAAGAG 60.734 60.000 15.21 15.18 40.17 2.85
1115 1124 0.456312 GTTGGTACTCTCGCACGGAG 60.456 60.000 0.00 6.90 44.58 4.63
1124 1133 2.280524 CGCACGGAGAACACCCAA 60.281 61.111 0.00 0.00 0.00 4.12
1132 1141 1.077357 AGAACACCCAACGCACCAA 60.077 52.632 0.00 0.00 0.00 3.67
1155 1164 2.671070 CAGCACGGACCAATCCCT 59.329 61.111 0.00 0.00 42.83 4.20
1161 1170 0.618981 ACGGACCAATCCCTTTCCTC 59.381 55.000 0.00 0.00 42.83 3.71
1162 1171 0.912486 CGGACCAATCCCTTTCCTCT 59.088 55.000 0.00 0.00 42.83 3.69
1163 1172 1.134371 CGGACCAATCCCTTTCCTCTC 60.134 57.143 0.00 0.00 42.83 3.20
1169 1178 1.031112 ATCCCTTTCCTCTCCTCCCT 58.969 55.000 0.00 0.00 0.00 4.20
1175 1184 3.054728 CCTTTCCTCTCCTCCCTTTTCTC 60.055 52.174 0.00 0.00 0.00 2.87
1176 1185 3.275848 TTCCTCTCCTCCCTTTTCTCA 57.724 47.619 0.00 0.00 0.00 3.27
1177 1186 2.541466 TCCTCTCCTCCCTTTTCTCAC 58.459 52.381 0.00 0.00 0.00 3.51
1178 1187 1.205893 CCTCTCCTCCCTTTTCTCACG 59.794 57.143 0.00 0.00 0.00 4.35
1200 1223 1.517257 AGATGCGCGAAAGACGAGG 60.517 57.895 12.10 0.00 45.77 4.63
1224 1247 2.183300 GCGACGATACCCACTGCA 59.817 61.111 0.00 0.00 0.00 4.41
1266 1289 2.989422 CGTGGCTTCGGAATTTTCTT 57.011 45.000 0.00 0.00 0.00 2.52
1267 1290 3.282831 CGTGGCTTCGGAATTTTCTTT 57.717 42.857 0.00 0.00 0.00 2.52
1268 1291 3.234386 CGTGGCTTCGGAATTTTCTTTC 58.766 45.455 0.00 0.00 0.00 2.62
1269 1292 3.058224 CGTGGCTTCGGAATTTTCTTTCT 60.058 43.478 0.00 0.00 0.00 2.52
1270 1293 4.556699 CGTGGCTTCGGAATTTTCTTTCTT 60.557 41.667 0.00 0.00 0.00 2.52
1271 1294 5.289595 GTGGCTTCGGAATTTTCTTTCTTT 58.710 37.500 0.00 0.00 0.00 2.52
1272 1295 5.402568 GTGGCTTCGGAATTTTCTTTCTTTC 59.597 40.000 0.00 0.00 0.00 2.62
1273 1296 5.301805 TGGCTTCGGAATTTTCTTTCTTTCT 59.698 36.000 0.00 0.00 0.00 2.52
1274 1297 6.183360 TGGCTTCGGAATTTTCTTTCTTTCTT 60.183 34.615 0.00 0.00 0.00 2.52
1275 1298 6.701841 GGCTTCGGAATTTTCTTTCTTTCTTT 59.298 34.615 0.00 0.00 0.00 2.52
1276 1299 7.096023 GGCTTCGGAATTTTCTTTCTTTCTTTC 60.096 37.037 0.00 0.00 0.00 2.62
1305 1328 8.257306 TCACAAAACTAATTTCTTTGCCTCTTT 58.743 29.630 6.53 0.00 34.15 2.52
1309 1332 5.645201 ACTAATTTCTTTGCCTCTTTCCCT 58.355 37.500 0.00 0.00 0.00 4.20
1311 1334 2.586648 TTCTTTGCCTCTTTCCCTCC 57.413 50.000 0.00 0.00 0.00 4.30
1403 1427 3.473669 CGCATCGCAGCAACTGTA 58.526 55.556 0.00 0.00 33.43 2.74
1419 1443 0.609151 TGTACTTTCAATCCGGGCGA 59.391 50.000 0.00 0.00 0.00 5.54
1420 1444 1.002201 TGTACTTTCAATCCGGGCGAA 59.998 47.619 0.00 0.00 0.00 4.70
1433 1457 0.896226 GGGCGAAGTTCTAGTGAGGT 59.104 55.000 0.56 0.00 0.00 3.85
1446 1470 2.032681 GAGGTGCGGGCTTCAACT 59.967 61.111 0.00 0.00 33.51 3.16
1447 1471 2.032681 AGGTGCGGGCTTCAACTC 59.967 61.111 0.00 0.00 0.00 3.01
1453 1477 3.423154 GGGCTTCAACTCGTGCGG 61.423 66.667 0.00 0.00 0.00 5.69
1473 1497 1.231958 TTGCCGTGGGTTGATTCGAC 61.232 55.000 0.00 0.00 0.00 4.20
1488 1512 3.984018 TTCGACCGATTTCGTTGATTC 57.016 42.857 0.00 0.00 40.07 2.52
1496 1520 3.369147 CGATTTCGTTGATTCTGCAGACT 59.631 43.478 18.03 11.94 34.11 3.24
1535 1559 0.610687 CCAGGAAGAAGTTCGAGGCT 59.389 55.000 0.00 0.00 32.92 4.58
1541 1565 0.896226 AGAAGTTCGAGGCTACCACC 59.104 55.000 0.00 0.00 0.00 4.61
1614 1638 4.894784 TGTGAGTCCTCGCTCTTTTTAAT 58.105 39.130 9.10 0.00 40.54 1.40
1642 1666 4.574828 TCTTATGGCTTCGTTAGATTTGCC 59.425 41.667 0.00 0.00 37.78 4.52
1746 1883 7.743104 AGATATTGTTGTTCTGCTTCTAAACG 58.257 34.615 0.00 0.00 0.00 3.60
1825 1970 4.214310 CATGGCAACCTCAAATGGGTATA 58.786 43.478 0.00 0.00 35.83 1.47
1829 1974 6.619464 TGGCAACCTCAAATGGGTATATTAT 58.381 36.000 0.00 0.00 35.83 1.28
1830 1975 7.760607 TGGCAACCTCAAATGGGTATATTATA 58.239 34.615 0.00 0.00 35.83 0.98
1851 1996 4.600692 ACAAAAATGGGTTCCTTAGTGC 57.399 40.909 0.00 0.00 0.00 4.40
1878 2024 5.710099 TGATTTGTCCCCAGATGTAGTTTTC 59.290 40.000 0.00 0.00 0.00 2.29
2015 2180 4.810345 TGGGATGGGGTTTGTATATTTCC 58.190 43.478 0.00 0.00 0.00 3.13
2034 2199 0.534877 CATCGGCGATCATTTGGGGA 60.535 55.000 21.25 0.00 0.00 4.81
2041 2206 1.739466 CGATCATTTGGGGACACACTG 59.261 52.381 0.00 0.00 42.67 3.66
2055 2221 2.435586 ACTGCTCTGCCGTGATGC 60.436 61.111 0.00 0.00 0.00 3.91
2056 2222 3.200593 CTGCTCTGCCGTGATGCC 61.201 66.667 0.00 0.00 0.00 4.40
2080 2246 5.408604 CCCTGCTAACACGGATATGAAATAC 59.591 44.000 0.00 0.00 0.00 1.89
2158 2324 4.194381 TGCAAATTCGAAAAAGCAAAGC 57.806 36.364 16.17 7.28 0.00 3.51
2240 2406 1.827245 GCCTTGGTTTGTCCCCAGATT 60.827 52.381 0.00 0.00 32.49 2.40
2647 2847 7.947282 TGTTCCCTGGATTTTTGTTTAACTAG 58.053 34.615 0.00 0.00 0.00 2.57
2686 2886 6.755141 GCAAGATCAACTAATAGTCACGGTTA 59.245 38.462 0.00 0.00 0.00 2.85
2778 2978 3.588842 AGATGGTGTTGGAGGATGAAGAA 59.411 43.478 0.00 0.00 0.00 2.52
2796 2996 5.302568 TGAAGAAGGTGTTGAATTTGATGCT 59.697 36.000 0.00 0.00 0.00 3.79
2874 3074 2.648059 CATGACTTGGAAGATGGGGAC 58.352 52.381 0.00 0.00 0.00 4.46
2966 3166 9.586435 CATTAATCTGGAACAAATAAACTTCCC 57.414 33.333 0.00 0.00 38.70 3.97
3004 3204 2.154462 CTCGCAATCTTGTCCCAACTT 58.846 47.619 0.00 0.00 0.00 2.66
3016 3216 5.269554 TGTCCCAACTTCCAATTAAGGAT 57.730 39.130 0.00 0.00 37.56 3.24
3054 3255 2.856222 CCTGATTAAGGGGCTCATGAC 58.144 52.381 0.00 0.00 43.15 3.06
3068 3291 5.221126 GGGCTCATGACCATAAATTTCTGAC 60.221 44.000 13.95 0.83 42.34 3.51
3125 3348 6.177310 TGTATATATAACGCAAACAGGGGT 57.823 37.500 0.00 0.00 35.20 4.95
3127 3350 7.380536 TGTATATATAACGCAAACAGGGGTAG 58.619 38.462 0.00 0.00 35.64 3.18
3128 3351 4.765813 ATATAACGCAAACAGGGGTAGT 57.234 40.909 0.00 0.00 35.64 2.73
3129 3352 5.874897 ATATAACGCAAACAGGGGTAGTA 57.125 39.130 0.00 0.00 35.64 1.82
3130 3353 2.934886 AACGCAAACAGGGGTAGTAA 57.065 45.000 0.00 0.00 33.15 2.24
3132 3355 2.497138 ACGCAAACAGGGGTAGTAAAC 58.503 47.619 0.00 0.00 31.53 2.01
3134 3357 2.482721 CGCAAACAGGGGTAGTAAACTG 59.517 50.000 0.00 0.00 37.01 3.16
3135 3358 2.817844 GCAAACAGGGGTAGTAAACTGG 59.182 50.000 0.00 0.00 35.34 4.00
3136 3359 3.749632 GCAAACAGGGGTAGTAAACTGGT 60.750 47.826 0.00 0.00 35.34 4.00
3139 3362 2.224695 ACAGGGGTAGTAAACTGGTTGC 60.225 50.000 0.00 0.00 35.34 4.17
3175 3398 9.074576 GTTCTTCCCTCCTTTTCTTTATACAAA 57.925 33.333 0.00 0.00 0.00 2.83
3200 3423 6.543831 AGCCACCTCATATTTTGTGTCTTATC 59.456 38.462 0.00 0.00 0.00 1.75
3222 3445 7.645058 ATCTTTAACCATCGATTTGACCAAT 57.355 32.000 0.00 0.00 0.00 3.16
3223 3446 8.746052 ATCTTTAACCATCGATTTGACCAATA 57.254 30.769 0.00 0.00 0.00 1.90
3224 3447 7.981142 TCTTTAACCATCGATTTGACCAATAC 58.019 34.615 0.00 0.00 0.00 1.89
3225 3448 7.608376 TCTTTAACCATCGATTTGACCAATACA 59.392 33.333 0.00 0.00 0.00 2.29
3226 3449 7.689446 TTAACCATCGATTTGACCAATACAA 57.311 32.000 0.00 0.00 0.00 2.41
3227 3450 6.773976 AACCATCGATTTGACCAATACAAT 57.226 33.333 0.00 0.00 0.00 2.71
3228 3451 7.873719 AACCATCGATTTGACCAATACAATA 57.126 32.000 0.00 0.00 0.00 1.90
3229 3452 8.463930 AACCATCGATTTGACCAATACAATAT 57.536 30.769 0.00 0.00 0.00 1.28
3276 3501 6.323203 ACATTGACTCATCACCTTTGAAAG 57.677 37.500 0.00 0.00 34.61 2.62
3282 3507 6.038603 TGACTCATCACCTTTGAAAGAAGTTG 59.961 38.462 6.49 4.31 34.61 3.16
3291 3518 6.480981 ACCTTTGAAAGAAGTTGCAAATGATG 59.519 34.615 6.49 0.00 30.79 3.07
3375 3635 5.743636 AATTTGTGGTGCCTTGTATCATT 57.256 34.783 0.00 0.00 0.00 2.57
3385 3645 3.683847 GCCTTGTATCATTGAGCTGAGGT 60.684 47.826 0.00 0.00 0.00 3.85
3464 3725 9.982291 TTCTTATGTACATTTAGTCGCATTTTC 57.018 29.630 14.77 0.00 31.37 2.29
3469 3730 3.126343 ACATTTAGTCGCATTTTCGGGTC 59.874 43.478 0.00 0.00 0.00 4.46
3470 3731 2.459060 TTAGTCGCATTTTCGGGTCA 57.541 45.000 0.00 0.00 0.00 4.02
3479 3740 4.084537 CGCATTTTCGGGTCATACATCTAC 60.085 45.833 0.00 0.00 0.00 2.59
3498 3759 2.648059 ACAGCCCTTCACATGCTATTC 58.352 47.619 0.00 0.00 33.16 1.75
3551 3812 3.922171 ATCGAAGATGGAAAAGAGGCT 57.078 42.857 0.00 0.00 45.12 4.58
3650 3911 3.415087 CCCCCTTCCAGCCCTGAG 61.415 72.222 0.00 0.00 0.00 3.35
3698 4004 2.048877 CGTGGGCGACGGTAGTTT 60.049 61.111 14.59 0.00 44.85 2.66
3706 4012 4.081752 TGGGCGACGGTAGTTTTCTTATTA 60.082 41.667 0.00 0.00 0.00 0.98
3717 4023 9.886132 GGTAGTTTTCTTATTAGTTCCATCAGA 57.114 33.333 0.00 0.00 0.00 3.27
3730 4036 7.639062 AGTTCCATCAGACCCTGAAATATAT 57.361 36.000 0.43 0.00 44.04 0.86
3737 4043 9.784531 CATCAGACCCTGAAATATATGTACTTT 57.215 33.333 0.43 0.00 44.04 2.66
3744 4050 7.069331 CCCTGAAATATATGTACTTTGGGCAAA 59.931 37.037 0.00 0.00 0.00 3.68
3752 4058 8.766994 ATATGTACTTTGGGCAAATATGTTCT 57.233 30.769 0.00 0.00 0.00 3.01
3760 4066 7.490962 TTGGGCAAATATGTTCTCGTATTAG 57.509 36.000 0.00 0.00 35.47 1.73
3761 4067 6.588204 TGGGCAAATATGTTCTCGTATTAGT 58.412 36.000 0.00 0.00 35.47 2.24
3763 4069 6.073222 GGGCAAATATGTTCTCGTATTAGTGG 60.073 42.308 0.00 0.00 35.47 4.00
3801 4107 5.987347 CAGGTCATCTGTTTTGCATCTTTTT 59.013 36.000 0.00 0.00 38.64 1.94
3814 4120 3.248363 GCATCTTTTTGTTGGCCTGTTTC 59.752 43.478 3.32 0.00 0.00 2.78
3815 4121 4.696455 CATCTTTTTGTTGGCCTGTTTCT 58.304 39.130 3.32 0.00 0.00 2.52
3816 4122 4.122143 TCTTTTTGTTGGCCTGTTTCTG 57.878 40.909 3.32 0.00 0.00 3.02
3821 4127 4.751767 TTGTTGGCCTGTTTCTGAAAAT 57.248 36.364 3.32 0.00 0.00 1.82
3835 4141 4.264253 TCTGAAAATATGGGTGCTCAGTG 58.736 43.478 0.00 0.00 33.58 3.66
3846 4152 1.277557 GTGCTCAGTGATCACCCTTCT 59.722 52.381 22.21 0.00 0.00 2.85
3847 4153 1.277273 TGCTCAGTGATCACCCTTCTG 59.723 52.381 22.21 13.35 0.00 3.02
3850 4156 2.762887 CTCAGTGATCACCCTTCTGCTA 59.237 50.000 22.21 0.00 0.00 3.49
3851 4157 3.378512 TCAGTGATCACCCTTCTGCTAT 58.621 45.455 22.21 0.00 0.00 2.97
3854 4160 2.171448 GTGATCACCCTTCTGCTATGGT 59.829 50.000 15.31 0.00 0.00 3.55
3864 4170 5.280011 CCCTTCTGCTATGGTAAACCGATAT 60.280 44.000 0.00 0.00 39.43 1.63
3865 4171 5.869888 CCTTCTGCTATGGTAAACCGATATC 59.130 44.000 0.00 0.00 39.43 1.63
3867 4173 6.268825 TCTGCTATGGTAAACCGATATCTC 57.731 41.667 0.34 0.00 39.43 2.75
3889 4196 8.366359 TCTCTAGCCAATTATCAGCATATGTA 57.634 34.615 4.29 0.00 0.00 2.29
3922 4229 8.970691 ATTACATGTAAAGAAATGTTCTGTGC 57.029 30.769 21.57 0.00 40.59 4.57
3979 4290 4.932200 GCTAATACAGTGTCTCAAGCACTT 59.068 41.667 0.00 0.00 43.87 3.16
3998 4309 6.094603 AGCACTTCAATATGTTTCTCACCATC 59.905 38.462 0.00 0.00 0.00 3.51
4003 4314 8.506168 TTCAATATGTTTCTCACCATCCTTAC 57.494 34.615 0.00 0.00 0.00 2.34
4010 4321 2.421073 TCTCACCATCCTTACGTGTACG 59.579 50.000 0.00 2.43 46.33 3.67
4108 4419 0.389556 AGCTGATGTCACTCTGCGTG 60.390 55.000 0.00 0.00 42.81 5.34
4273 4587 6.689178 ACAAAACATCATCGCATTTACAAC 57.311 33.333 0.00 0.00 0.00 3.32
4360 4674 2.162681 GCATTAACACTGCCAGAGGTT 58.837 47.619 0.00 5.25 33.44 3.50
4414 4728 7.678947 AGAAGTTGACAAGGATTTACTCATG 57.321 36.000 0.00 0.00 0.00 3.07
4438 4752 2.039480 ACCTGAGTCTGTGTCCGTAGTA 59.961 50.000 0.00 0.00 0.00 1.82
4443 4757 3.884091 GAGTCTGTGTCCGTAGTATCCAT 59.116 47.826 0.00 0.00 0.00 3.41
4498 4812 0.250597 TGACCTCGAGTTCTCGGACA 60.251 55.000 19.65 9.92 0.00 4.02
4504 4818 1.743958 TCGAGTTCTCGGACAATCTCC 59.256 52.381 19.65 0.00 35.33 3.71
4519 4833 3.309582 TCCGACATGGAAGGCCTC 58.690 61.111 5.23 0.00 46.38 4.70
4600 4914 3.717294 GGACACAGGCCCATCCGT 61.717 66.667 0.00 0.00 40.77 4.69
4606 4920 2.284625 AGGCCCATCCGTCTGTCA 60.285 61.111 0.00 0.00 40.77 3.58
4662 4976 6.526674 GCTTTGTTTACCTATAACATGCACAC 59.473 38.462 0.00 0.00 36.37 3.82
4665 4979 7.695480 TGTTTACCTATAACATGCACACAAT 57.305 32.000 0.00 0.00 30.96 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.606601 GAAAAGTGACCCAGGGCCC 60.607 63.158 16.46 16.46 0.00 5.80
1 2 0.251787 ATGAAAAGTGACCCAGGGCC 60.252 55.000 4.91 0.00 0.00 5.80
2 3 1.177401 GATGAAAAGTGACCCAGGGC 58.823 55.000 4.91 0.00 0.00 5.19
3 4 2.584835 TGATGAAAAGTGACCCAGGG 57.415 50.000 2.85 2.85 0.00 4.45
4 5 6.567050 CAAATATGATGAAAAGTGACCCAGG 58.433 40.000 0.00 0.00 0.00 4.45
5 6 6.038356 GCAAATATGATGAAAAGTGACCCAG 58.962 40.000 0.00 0.00 0.00 4.45
6 7 5.105392 GGCAAATATGATGAAAAGTGACCCA 60.105 40.000 0.00 0.00 0.00 4.51
7 8 5.127682 AGGCAAATATGATGAAAAGTGACCC 59.872 40.000 0.00 0.00 0.00 4.46
8 9 6.212888 AGGCAAATATGATGAAAAGTGACC 57.787 37.500 0.00 0.00 0.00 4.02
9 10 7.412237 GCAAAGGCAAATATGATGAAAAGTGAC 60.412 37.037 0.00 0.00 40.72 3.67
10 11 6.591062 GCAAAGGCAAATATGATGAAAAGTGA 59.409 34.615 0.00 0.00 40.72 3.41
11 12 6.454583 CGCAAAGGCAAATATGATGAAAAGTG 60.455 38.462 0.00 0.00 41.24 3.16
12 13 5.577945 CGCAAAGGCAAATATGATGAAAAGT 59.422 36.000 0.00 0.00 41.24 2.66
13 14 5.806502 TCGCAAAGGCAAATATGATGAAAAG 59.193 36.000 0.00 0.00 41.24 2.27
14 15 5.718146 TCGCAAAGGCAAATATGATGAAAA 58.282 33.333 0.00 0.00 41.24 2.29
15 16 5.321959 TCGCAAAGGCAAATATGATGAAA 57.678 34.783 0.00 0.00 41.24 2.69
16 17 4.979943 TCGCAAAGGCAAATATGATGAA 57.020 36.364 0.00 0.00 41.24 2.57
17 18 4.823442 AGATCGCAAAGGCAAATATGATGA 59.177 37.500 0.00 0.00 41.24 2.92
18 19 5.117355 AGATCGCAAAGGCAAATATGATG 57.883 39.130 0.00 0.00 41.24 3.07
19 20 7.458409 AATAGATCGCAAAGGCAAATATGAT 57.542 32.000 0.00 0.00 41.24 2.45
20 21 6.882610 AATAGATCGCAAAGGCAAATATGA 57.117 33.333 0.00 0.00 41.24 2.15
21 22 7.935338 AAAATAGATCGCAAAGGCAAATATG 57.065 32.000 0.00 0.00 41.24 1.78
22 23 8.416329 AGAAAAATAGATCGCAAAGGCAAATAT 58.584 29.630 0.00 0.00 41.24 1.28
23 24 7.771183 AGAAAAATAGATCGCAAAGGCAAATA 58.229 30.769 0.00 0.00 41.24 1.40
24 25 6.633856 AGAAAAATAGATCGCAAAGGCAAAT 58.366 32.000 0.00 0.00 41.24 2.32
25 26 6.024552 AGAAAAATAGATCGCAAAGGCAAA 57.975 33.333 0.00 0.00 41.24 3.68
26 27 5.643379 AGAAAAATAGATCGCAAAGGCAA 57.357 34.783 0.00 0.00 41.24 4.52
27 28 5.643379 AAGAAAAATAGATCGCAAAGGCA 57.357 34.783 0.00 0.00 41.24 4.75
28 29 5.516696 GGAAAGAAAAATAGATCGCAAAGGC 59.483 40.000 0.00 0.00 0.00 4.35
29 30 6.620678 TGGAAAGAAAAATAGATCGCAAAGG 58.379 36.000 0.00 0.00 0.00 3.11
30 31 8.693542 AATGGAAAGAAAAATAGATCGCAAAG 57.306 30.769 0.00 0.00 0.00 2.77
72 73 9.402320 AGCAAGGTATTTTTGTATTTTTGGTTT 57.598 25.926 0.00 0.00 0.00 3.27
73 74 8.835439 CAGCAAGGTATTTTTGTATTTTTGGTT 58.165 29.630 0.00 0.00 0.00 3.67
74 75 7.041440 GCAGCAAGGTATTTTTGTATTTTTGGT 60.041 33.333 0.00 0.00 0.00 3.67
75 76 7.041508 TGCAGCAAGGTATTTTTGTATTTTTGG 60.042 33.333 0.00 0.00 0.00 3.28
76 77 7.859598 TGCAGCAAGGTATTTTTGTATTTTTG 58.140 30.769 0.00 0.00 0.00 2.44
77 78 8.443953 TTGCAGCAAGGTATTTTTGTATTTTT 57.556 26.923 2.83 0.00 0.00 1.94
78 79 8.620116 ATTGCAGCAAGGTATTTTTGTATTTT 57.380 26.923 14.47 0.00 0.00 1.82
79 80 8.620116 AATTGCAGCAAGGTATTTTTGTATTT 57.380 26.923 14.47 0.00 0.00 1.40
80 81 8.620116 AAATTGCAGCAAGGTATTTTTGTATT 57.380 26.923 14.47 0.00 0.00 1.89
81 82 9.889128 ATAAATTGCAGCAAGGTATTTTTGTAT 57.111 25.926 14.47 0.00 0.00 2.29
82 83 9.717942 AATAAATTGCAGCAAGGTATTTTTGTA 57.282 25.926 14.47 0.00 0.00 2.41
83 84 8.620116 AATAAATTGCAGCAAGGTATTTTTGT 57.380 26.923 14.47 3.75 0.00 2.83
84 85 9.332301 CAAATAAATTGCAGCAAGGTATTTTTG 57.668 29.630 23.80 18.30 30.68 2.44
85 86 9.065798 ACAAATAAATTGCAGCAAGGTATTTTT 57.934 25.926 23.80 18.91 43.13 1.94
86 87 8.620116 ACAAATAAATTGCAGCAAGGTATTTT 57.380 26.923 23.80 17.16 43.13 1.82
87 88 8.620116 AACAAATAAATTGCAGCAAGGTATTT 57.380 26.923 22.09 22.09 43.13 1.40
88 89 7.334171 GGAACAAATAAATTGCAGCAAGGTATT 59.666 33.333 14.47 15.20 43.13 1.89
89 90 6.818142 GGAACAAATAAATTGCAGCAAGGTAT 59.182 34.615 14.47 10.29 43.13 2.73
90 91 6.162777 GGAACAAATAAATTGCAGCAAGGTA 58.837 36.000 14.47 8.37 43.13 3.08
91 92 4.996758 GGAACAAATAAATTGCAGCAAGGT 59.003 37.500 14.47 6.29 43.13 3.50
92 93 4.091800 CGGAACAAATAAATTGCAGCAAGG 59.908 41.667 14.47 0.00 43.13 3.61
93 94 4.685628 ACGGAACAAATAAATTGCAGCAAG 59.314 37.500 14.47 0.20 43.13 4.01
94 95 4.447054 CACGGAACAAATAAATTGCAGCAA 59.553 37.500 11.07 11.07 43.13 3.91
95 96 3.986572 CACGGAACAAATAAATTGCAGCA 59.013 39.130 0.00 0.00 43.13 4.41
96 97 4.233789 TCACGGAACAAATAAATTGCAGC 58.766 39.130 0.00 0.00 43.13 5.25
97 98 6.324819 AGATCACGGAACAAATAAATTGCAG 58.675 36.000 0.00 0.00 43.13 4.41
98 99 6.266168 AGATCACGGAACAAATAAATTGCA 57.734 33.333 0.00 0.00 43.13 4.08
99 100 8.856490 AATAGATCACGGAACAAATAAATTGC 57.144 30.769 0.00 0.00 43.13 3.56
107 108 9.706691 GATAGGATAAATAGATCACGGAACAAA 57.293 33.333 0.00 0.00 0.00 2.83
108 109 9.090103 AGATAGGATAAATAGATCACGGAACAA 57.910 33.333 0.00 0.00 0.00 2.83
109 110 8.651589 AGATAGGATAAATAGATCACGGAACA 57.348 34.615 0.00 0.00 0.00 3.18
111 112 9.186837 GGTAGATAGGATAAATAGATCACGGAA 57.813 37.037 0.00 0.00 0.00 4.30
112 113 8.333984 TGGTAGATAGGATAAATAGATCACGGA 58.666 37.037 0.00 0.00 0.00 4.69
113 114 8.407064 GTGGTAGATAGGATAAATAGATCACGG 58.593 40.741 0.00 0.00 0.00 4.94
114 115 9.179909 AGTGGTAGATAGGATAAATAGATCACG 57.820 37.037 0.00 0.00 0.00 4.35
123 124 9.496710 TGAGGTAAAAGTGGTAGATAGGATAAA 57.503 33.333 0.00 0.00 0.00 1.40
124 125 9.496710 TTGAGGTAAAAGTGGTAGATAGGATAA 57.503 33.333 0.00 0.00 0.00 1.75
125 126 9.144298 CTTGAGGTAAAAGTGGTAGATAGGATA 57.856 37.037 0.00 0.00 0.00 2.59
126 127 7.624077 ACTTGAGGTAAAAGTGGTAGATAGGAT 59.376 37.037 0.00 0.00 36.52 3.24
127 128 6.958192 ACTTGAGGTAAAAGTGGTAGATAGGA 59.042 38.462 0.00 0.00 36.52 2.94
128 129 7.184067 ACTTGAGGTAAAAGTGGTAGATAGG 57.816 40.000 0.00 0.00 36.52 2.57
132 133 9.280174 CAAATAACTTGAGGTAAAAGTGGTAGA 57.720 33.333 0.00 0.00 37.90 2.59
133 134 8.021396 GCAAATAACTTGAGGTAAAAGTGGTAG 58.979 37.037 0.00 0.00 37.90 3.18
134 135 7.040271 GGCAAATAACTTGAGGTAAAAGTGGTA 60.040 37.037 0.00 0.00 37.90 3.25
135 136 6.239204 GGCAAATAACTTGAGGTAAAAGTGGT 60.239 38.462 0.00 0.00 37.90 4.16
136 137 6.015434 AGGCAAATAACTTGAGGTAAAAGTGG 60.015 38.462 0.00 0.00 37.90 4.00
137 138 6.981722 AGGCAAATAACTTGAGGTAAAAGTG 58.018 36.000 0.00 0.00 37.90 3.16
138 139 8.879427 ATAGGCAAATAACTTGAGGTAAAAGT 57.121 30.769 0.00 0.00 39.55 2.66
139 140 9.178758 AGATAGGCAAATAACTTGAGGTAAAAG 57.821 33.333 0.00 0.00 37.17 2.27
140 141 9.528489 AAGATAGGCAAATAACTTGAGGTAAAA 57.472 29.630 0.00 0.00 37.17 1.52
141 142 8.956426 CAAGATAGGCAAATAACTTGAGGTAAA 58.044 33.333 0.00 0.00 37.60 2.01
142 143 8.325787 TCAAGATAGGCAAATAACTTGAGGTAA 58.674 33.333 0.00 0.00 38.73 2.85
143 144 7.857456 TCAAGATAGGCAAATAACTTGAGGTA 58.143 34.615 0.00 0.00 38.73 3.08
144 145 6.721318 TCAAGATAGGCAAATAACTTGAGGT 58.279 36.000 0.00 0.00 38.73 3.85
159 160 0.318784 GTACGGCGCCTCAAGATAGG 60.319 60.000 26.68 7.84 39.87 2.57
160 161 0.318784 GGTACGGCGCCTCAAGATAG 60.319 60.000 26.68 8.67 0.00 2.08
161 162 1.737816 GGTACGGCGCCTCAAGATA 59.262 57.895 26.68 4.10 0.00 1.98
162 163 2.499685 GGTACGGCGCCTCAAGAT 59.500 61.111 26.68 5.14 0.00 2.40
163 164 3.766691 GGGTACGGCGCCTCAAGA 61.767 66.667 26.68 1.20 0.00 3.02
167 168 4.440127 TTTCGGGTACGGCGCCTC 62.440 66.667 26.68 14.44 41.39 4.70
168 169 4.446413 CTTTCGGGTACGGCGCCT 62.446 66.667 26.68 14.27 41.39 5.52
179 180 0.605589 GGGTTGTCAGTCCCTTTCGG 60.606 60.000 7.64 0.00 40.48 4.30
180 181 0.605589 GGGGTTGTCAGTCCCTTTCG 60.606 60.000 12.82 0.00 43.00 3.46
181 182 3.341263 GGGGTTGTCAGTCCCTTTC 57.659 57.895 12.82 0.00 43.00 2.62
185 186 2.158579 TGTTAAAGGGGTTGTCAGTCCC 60.159 50.000 6.62 6.62 42.73 4.46
186 187 2.882761 GTGTTAAAGGGGTTGTCAGTCC 59.117 50.000 0.00 0.00 0.00 3.85
187 188 2.546789 CGTGTTAAAGGGGTTGTCAGTC 59.453 50.000 0.00 0.00 0.00 3.51
188 189 2.092807 ACGTGTTAAAGGGGTTGTCAGT 60.093 45.455 0.00 0.00 0.00 3.41
189 190 2.546789 GACGTGTTAAAGGGGTTGTCAG 59.453 50.000 0.00 0.00 0.00 3.51
190 191 2.093075 TGACGTGTTAAAGGGGTTGTCA 60.093 45.455 0.00 0.00 33.14 3.58
191 192 2.546789 CTGACGTGTTAAAGGGGTTGTC 59.453 50.000 0.00 0.00 0.00 3.18
192 193 2.567985 CTGACGTGTTAAAGGGGTTGT 58.432 47.619 0.00 0.00 0.00 3.32
193 194 1.877443 CCTGACGTGTTAAAGGGGTTG 59.123 52.381 0.00 0.00 0.00 3.77
194 195 1.491754 ACCTGACGTGTTAAAGGGGTT 59.508 47.619 0.00 0.00 33.87 4.11
195 196 1.134228 ACCTGACGTGTTAAAGGGGT 58.866 50.000 0.00 0.00 33.87 4.95
196 197 1.877443 CAACCTGACGTGTTAAAGGGG 59.123 52.381 0.00 0.00 33.87 4.79
197 198 1.265905 GCAACCTGACGTGTTAAAGGG 59.734 52.381 0.00 0.00 33.87 3.95
198 199 1.070175 CGCAACCTGACGTGTTAAAGG 60.070 52.381 0.00 0.00 35.82 3.11
199 200 1.862201 TCGCAACCTGACGTGTTAAAG 59.138 47.619 0.00 0.00 0.00 1.85
200 201 1.862201 CTCGCAACCTGACGTGTTAAA 59.138 47.619 0.00 0.00 0.00 1.52
201 202 1.202440 ACTCGCAACCTGACGTGTTAA 60.202 47.619 0.00 0.00 32.68 2.01
202 203 0.386476 ACTCGCAACCTGACGTGTTA 59.614 50.000 0.00 0.00 32.68 2.41
203 204 0.386476 TACTCGCAACCTGACGTGTT 59.614 50.000 0.00 0.00 37.25 3.32
204 205 0.601558 ATACTCGCAACCTGACGTGT 59.398 50.000 0.00 0.00 39.15 4.49
205 206 1.710013 AATACTCGCAACCTGACGTG 58.290 50.000 0.00 0.00 0.00 4.49
206 207 2.066262 CAAATACTCGCAACCTGACGT 58.934 47.619 0.00 0.00 0.00 4.34
207 208 2.066262 ACAAATACTCGCAACCTGACG 58.934 47.619 0.00 0.00 0.00 4.35
208 209 5.796350 ATAACAAATACTCGCAACCTGAC 57.204 39.130 0.00 0.00 0.00 3.51
209 210 6.205853 ACAAATAACAAATACTCGCAACCTGA 59.794 34.615 0.00 0.00 0.00 3.86
210 211 6.305399 CACAAATAACAAATACTCGCAACCTG 59.695 38.462 0.00 0.00 0.00 4.00
211 212 6.016610 ACACAAATAACAAATACTCGCAACCT 60.017 34.615 0.00 0.00 0.00 3.50
212 213 6.087555 CACACAAATAACAAATACTCGCAACC 59.912 38.462 0.00 0.00 0.00 3.77
213 214 6.398517 GCACACAAATAACAAATACTCGCAAC 60.399 38.462 0.00 0.00 0.00 4.17
214 215 5.627367 GCACACAAATAACAAATACTCGCAA 59.373 36.000 0.00 0.00 0.00 4.85
215 216 5.150683 GCACACAAATAACAAATACTCGCA 58.849 37.500 0.00 0.00 0.00 5.10
216 217 5.150683 TGCACACAAATAACAAATACTCGC 58.849 37.500 0.00 0.00 0.00 5.03
217 218 5.794945 CCTGCACACAAATAACAAATACTCG 59.205 40.000 0.00 0.00 0.00 4.18
218 219 6.582295 CACCTGCACACAAATAACAAATACTC 59.418 38.462 0.00 0.00 0.00 2.59
219 220 6.040391 ACACCTGCACACAAATAACAAATACT 59.960 34.615 0.00 0.00 0.00 2.12
220 221 6.212955 ACACCTGCACACAAATAACAAATAC 58.787 36.000 0.00 0.00 0.00 1.89
221 222 6.398234 ACACCTGCACACAAATAACAAATA 57.602 33.333 0.00 0.00 0.00 1.40
222 223 5.275067 ACACCTGCACACAAATAACAAAT 57.725 34.783 0.00 0.00 0.00 2.32
223 224 4.727507 ACACCTGCACACAAATAACAAA 57.272 36.364 0.00 0.00 0.00 2.83
224 225 4.081972 ACAACACCTGCACACAAATAACAA 60.082 37.500 0.00 0.00 0.00 2.83
225 226 3.445450 ACAACACCTGCACACAAATAACA 59.555 39.130 0.00 0.00 0.00 2.41
226 227 4.040445 ACAACACCTGCACACAAATAAC 57.960 40.909 0.00 0.00 0.00 1.89
227 228 4.727507 AACAACACCTGCACACAAATAA 57.272 36.364 0.00 0.00 0.00 1.40
228 229 4.727507 AAACAACACCTGCACACAAATA 57.272 36.364 0.00 0.00 0.00 1.40
229 230 3.608316 AAACAACACCTGCACACAAAT 57.392 38.095 0.00 0.00 0.00 2.32
230 231 3.670895 CGTAAACAACACCTGCACACAAA 60.671 43.478 0.00 0.00 0.00 2.83
231 232 2.159503 CGTAAACAACACCTGCACACAA 60.160 45.455 0.00 0.00 0.00 3.33
232 233 1.398739 CGTAAACAACACCTGCACACA 59.601 47.619 0.00 0.00 0.00 3.72
233 234 1.399089 ACGTAAACAACACCTGCACAC 59.601 47.619 0.00 0.00 0.00 3.82
234 235 1.398739 CACGTAAACAACACCTGCACA 59.601 47.619 0.00 0.00 0.00 4.57
235 236 1.268335 CCACGTAAACAACACCTGCAC 60.268 52.381 0.00 0.00 0.00 4.57
236 237 1.018148 CCACGTAAACAACACCTGCA 58.982 50.000 0.00 0.00 0.00 4.41
237 238 1.018910 ACCACGTAAACAACACCTGC 58.981 50.000 0.00 0.00 0.00 4.85
238 239 2.011222 ACACCACGTAAACAACACCTG 58.989 47.619 0.00 0.00 0.00 4.00
239 240 2.406596 ACACCACGTAAACAACACCT 57.593 45.000 0.00 0.00 0.00 4.00
240 241 3.002553 CCTTACACCACGTAAACAACACC 59.997 47.826 0.00 0.00 39.59 4.16
241 242 3.870419 TCCTTACACCACGTAAACAACAC 59.130 43.478 0.00 0.00 39.59 3.32
242 243 4.121317 CTCCTTACACCACGTAAACAACA 58.879 43.478 0.00 0.00 39.59 3.33
243 244 3.495753 CCTCCTTACACCACGTAAACAAC 59.504 47.826 0.00 0.00 39.59 3.32
244 245 3.134442 ACCTCCTTACACCACGTAAACAA 59.866 43.478 0.00 0.00 39.59 2.83
245 246 2.699846 ACCTCCTTACACCACGTAAACA 59.300 45.455 0.00 0.00 39.59 2.83
246 247 3.391506 ACCTCCTTACACCACGTAAAC 57.608 47.619 0.00 0.00 39.59 2.01
247 248 3.642848 AGAACCTCCTTACACCACGTAAA 59.357 43.478 0.00 0.00 39.59 2.01
248 249 3.233507 AGAACCTCCTTACACCACGTAA 58.766 45.455 0.00 0.00 37.76 3.18
249 250 2.821969 GAGAACCTCCTTACACCACGTA 59.178 50.000 0.00 0.00 0.00 3.57
250 251 1.617357 GAGAACCTCCTTACACCACGT 59.383 52.381 0.00 0.00 0.00 4.49
251 252 1.067071 GGAGAACCTCCTTACACCACG 60.067 57.143 5.78 0.00 46.41 4.94
252 253 2.764439 GGAGAACCTCCTTACACCAC 57.236 55.000 5.78 0.00 46.41 4.16
262 263 4.828072 ATCAAACCAGTAGGAGAACCTC 57.172 45.455 0.00 0.00 46.43 3.85
277 278 5.940470 AGTGATGAGACCAAGGTTATCAAAC 59.060 40.000 10.80 11.53 31.32 2.93
278 279 5.939883 CAGTGATGAGACCAAGGTTATCAAA 59.060 40.000 10.80 2.70 31.32 2.69
279 280 5.248248 TCAGTGATGAGACCAAGGTTATCAA 59.752 40.000 10.80 0.00 31.32 2.57
280 281 4.777366 TCAGTGATGAGACCAAGGTTATCA 59.223 41.667 9.60 9.60 0.00 2.15
281 282 5.127845 TCTCAGTGATGAGACCAAGGTTATC 59.872 44.000 3.88 0.00 39.74 1.75
282 283 5.026121 TCTCAGTGATGAGACCAAGGTTAT 58.974 41.667 3.88 0.00 39.74 1.89
283 284 4.416516 TCTCAGTGATGAGACCAAGGTTA 58.583 43.478 3.88 0.00 39.74 2.85
284 285 3.242867 TCTCAGTGATGAGACCAAGGTT 58.757 45.455 3.88 0.00 39.74 3.50
285 286 2.894731 TCTCAGTGATGAGACCAAGGT 58.105 47.619 3.88 0.00 39.74 3.50
286 287 3.969287 TTCTCAGTGATGAGACCAAGG 57.031 47.619 7.44 0.00 43.78 3.61
287 288 6.814506 ATTTTTCTCAGTGATGAGACCAAG 57.185 37.500 7.44 0.00 43.78 3.61
288 289 7.453393 AGTATTTTTCTCAGTGATGAGACCAA 58.547 34.615 7.44 4.54 43.78 3.67
289 290 7.009179 AGTATTTTTCTCAGTGATGAGACCA 57.991 36.000 7.44 0.00 43.78 4.02
290 291 7.913674 AAGTATTTTTCTCAGTGATGAGACC 57.086 36.000 7.44 0.00 43.78 3.85
291 292 8.874816 GGTAAGTATTTTTCTCAGTGATGAGAC 58.125 37.037 7.44 0.00 43.78 3.36
292 293 7.759886 CGGTAAGTATTTTTCTCAGTGATGAGA 59.240 37.037 3.88 3.88 42.56 3.27
293 294 7.545965 ACGGTAAGTATTTTTCTCAGTGATGAG 59.454 37.037 0.00 0.00 37.28 2.90
294 295 7.383687 ACGGTAAGTATTTTTCTCAGTGATGA 58.616 34.615 0.00 0.00 0.00 2.92
295 296 7.462856 CGACGGTAAGTATTTTTCTCAGTGATG 60.463 40.741 0.00 0.00 0.00 3.07
296 297 6.530534 CGACGGTAAGTATTTTTCTCAGTGAT 59.469 38.462 0.00 0.00 0.00 3.06
297 298 5.860182 CGACGGTAAGTATTTTTCTCAGTGA 59.140 40.000 0.00 0.00 0.00 3.41
298 299 5.444218 GCGACGGTAAGTATTTTTCTCAGTG 60.444 44.000 0.00 0.00 0.00 3.66
299 300 4.624452 GCGACGGTAAGTATTTTTCTCAGT 59.376 41.667 0.00 0.00 0.00 3.41
300 301 4.863131 AGCGACGGTAAGTATTTTTCTCAG 59.137 41.667 0.00 0.00 0.00 3.35
301 302 4.813027 AGCGACGGTAAGTATTTTTCTCA 58.187 39.130 0.00 0.00 0.00 3.27
302 303 7.859875 AGTATAGCGACGGTAAGTATTTTTCTC 59.140 37.037 11.22 0.00 0.00 2.87
303 304 7.646922 CAGTATAGCGACGGTAAGTATTTTTCT 59.353 37.037 11.22 0.00 0.00 2.52
304 305 7.566508 GCAGTATAGCGACGGTAAGTATTTTTC 60.567 40.741 11.22 0.00 0.00 2.29
305 306 6.199719 GCAGTATAGCGACGGTAAGTATTTTT 59.800 38.462 11.22 0.00 0.00 1.94
306 307 5.689068 GCAGTATAGCGACGGTAAGTATTTT 59.311 40.000 11.22 0.00 0.00 1.82
307 308 5.218139 GCAGTATAGCGACGGTAAGTATTT 58.782 41.667 11.22 0.00 0.00 1.40
308 309 4.276678 TGCAGTATAGCGACGGTAAGTATT 59.723 41.667 11.22 0.00 37.31 1.89
309 310 3.817084 TGCAGTATAGCGACGGTAAGTAT 59.183 43.478 11.22 0.00 37.31 2.12
310 311 3.205338 TGCAGTATAGCGACGGTAAGTA 58.795 45.455 11.22 0.00 37.31 2.24
311 312 2.019249 TGCAGTATAGCGACGGTAAGT 58.981 47.619 11.22 0.00 37.31 2.24
312 313 2.768833 TGCAGTATAGCGACGGTAAG 57.231 50.000 11.22 3.24 37.31 2.34
313 314 2.619646 TGATGCAGTATAGCGACGGTAA 59.380 45.455 11.22 0.00 37.31 2.85
314 315 2.223745 TGATGCAGTATAGCGACGGTA 58.776 47.619 9.48 9.48 37.31 4.02
315 316 1.029681 TGATGCAGTATAGCGACGGT 58.970 50.000 4.41 4.41 37.31 4.83
316 317 2.254459 GATGATGCAGTATAGCGACGG 58.746 52.381 0.00 0.00 37.31 4.79
317 318 2.254459 GGATGATGCAGTATAGCGACG 58.746 52.381 0.00 0.00 37.31 5.12
318 319 2.232452 AGGGATGATGCAGTATAGCGAC 59.768 50.000 0.00 0.00 37.31 5.19
319 320 2.529632 AGGGATGATGCAGTATAGCGA 58.470 47.619 0.00 0.00 37.31 4.93
320 321 3.325293 AAGGGATGATGCAGTATAGCG 57.675 47.619 0.00 0.00 37.31 4.26
321 322 5.312079 AGAAAAGGGATGATGCAGTATAGC 58.688 41.667 0.00 0.00 0.00 2.97
322 323 7.255381 CCAAAGAAAAGGGATGATGCAGTATAG 60.255 40.741 0.00 0.00 0.00 1.31
323 324 6.547141 CCAAAGAAAAGGGATGATGCAGTATA 59.453 38.462 0.00 0.00 0.00 1.47
324 325 5.361857 CCAAAGAAAAGGGATGATGCAGTAT 59.638 40.000 0.00 0.00 0.00 2.12
325 326 4.706476 CCAAAGAAAAGGGATGATGCAGTA 59.294 41.667 0.00 0.00 0.00 2.74
326 327 3.512724 CCAAAGAAAAGGGATGATGCAGT 59.487 43.478 0.00 0.00 0.00 4.40
327 328 3.765511 TCCAAAGAAAAGGGATGATGCAG 59.234 43.478 0.00 0.00 0.00 4.41
328 329 3.777087 TCCAAAGAAAAGGGATGATGCA 58.223 40.909 0.00 0.00 0.00 3.96
329 330 4.806640 TTCCAAAGAAAAGGGATGATGC 57.193 40.909 0.00 0.00 0.00 3.91
342 343 9.667107 AGAACTATGTCGATATTTTTCCAAAGA 57.333 29.630 0.00 0.00 0.00 2.52
345 346 9.042008 GCTAGAACTATGTCGATATTTTTCCAA 57.958 33.333 0.00 0.00 0.00 3.53
346 347 8.201464 TGCTAGAACTATGTCGATATTTTTCCA 58.799 33.333 0.00 0.00 0.00 3.53
347 348 8.589335 TGCTAGAACTATGTCGATATTTTTCC 57.411 34.615 0.00 0.00 0.00 3.13
348 349 9.464714 TCTGCTAGAACTATGTCGATATTTTTC 57.535 33.333 0.00 3.92 0.00 2.29
349 350 9.250624 GTCTGCTAGAACTATGTCGATATTTTT 57.749 33.333 0.00 0.00 0.00 1.94
350 351 8.414003 TGTCTGCTAGAACTATGTCGATATTTT 58.586 33.333 0.00 0.00 0.00 1.82
351 352 7.941919 TGTCTGCTAGAACTATGTCGATATTT 58.058 34.615 0.00 0.00 0.00 1.40
352 353 7.511959 TGTCTGCTAGAACTATGTCGATATT 57.488 36.000 0.00 0.00 0.00 1.28
353 354 7.391833 TGATGTCTGCTAGAACTATGTCGATAT 59.608 37.037 0.00 0.00 0.00 1.63
354 355 6.710744 TGATGTCTGCTAGAACTATGTCGATA 59.289 38.462 0.00 0.00 0.00 2.92
355 356 5.532779 TGATGTCTGCTAGAACTATGTCGAT 59.467 40.000 0.00 0.00 0.00 3.59
356 357 4.881850 TGATGTCTGCTAGAACTATGTCGA 59.118 41.667 0.00 0.00 0.00 4.20
357 358 5.175090 TGATGTCTGCTAGAACTATGTCG 57.825 43.478 0.00 0.00 0.00 4.35
358 359 4.981674 GCTGATGTCTGCTAGAACTATGTC 59.018 45.833 0.00 0.00 37.75 3.06
359 360 4.498850 CGCTGATGTCTGCTAGAACTATGT 60.499 45.833 9.66 0.00 38.46 2.29
360 361 3.980134 CGCTGATGTCTGCTAGAACTATG 59.020 47.826 9.66 0.00 38.46 2.23
361 362 3.551863 GCGCTGATGTCTGCTAGAACTAT 60.552 47.826 0.00 0.00 38.46 2.12
362 363 2.223595 GCGCTGATGTCTGCTAGAACTA 60.224 50.000 0.00 0.00 38.46 2.24
363 364 1.470632 GCGCTGATGTCTGCTAGAACT 60.471 52.381 0.00 0.00 38.46 3.01
364 365 0.926846 GCGCTGATGTCTGCTAGAAC 59.073 55.000 0.00 0.00 38.46 3.01
365 366 0.179100 GGCGCTGATGTCTGCTAGAA 60.179 55.000 7.64 0.00 38.46 2.10
366 367 1.439228 GGCGCTGATGTCTGCTAGA 59.561 57.895 7.64 0.00 38.46 2.43
367 368 1.593750 GGGCGCTGATGTCTGCTAG 60.594 63.158 7.64 0.00 38.46 3.42
368 369 2.021068 GAGGGCGCTGATGTCTGCTA 62.021 60.000 8.56 0.00 38.46 3.49
369 370 3.382803 GAGGGCGCTGATGTCTGCT 62.383 63.158 8.56 0.00 38.46 4.24
370 371 2.894387 GAGGGCGCTGATGTCTGC 60.894 66.667 8.56 2.21 37.44 4.26
371 372 1.521010 CAGAGGGCGCTGATGTCTG 60.521 63.158 8.56 5.22 38.14 3.51
372 373 2.729479 CCAGAGGGCGCTGATGTCT 61.729 63.158 8.56 0.00 38.14 3.41
373 374 2.202987 CCAGAGGGCGCTGATGTC 60.203 66.667 8.56 0.00 38.14 3.06
383 384 4.189188 CGTACCGACGCCAGAGGG 62.189 72.222 0.00 0.00 43.21 4.30
429 430 4.840288 CATGTGCACCATGGCGCG 62.840 66.667 19.45 0.00 46.03 6.86
457 458 1.956629 GATGATGGACCCGTCGTGGT 61.957 60.000 7.66 5.24 42.79 4.16
458 459 1.227263 GATGATGGACCCGTCGTGG 60.227 63.158 7.66 0.00 34.87 4.94
459 460 1.588932 CGATGATGGACCCGTCGTG 60.589 63.158 7.66 0.00 38.02 4.35
460 461 1.751544 TCGATGATGGACCCGTCGT 60.752 57.895 10.85 2.77 42.02 4.34
461 462 1.299165 GTCGATGATGGACCCGTCG 60.299 63.158 6.13 6.13 42.53 5.12
462 463 1.067582 GGTCGATGATGGACCCGTC 59.932 63.158 14.87 1.35 46.65 4.79
463 464 3.217231 GGTCGATGATGGACCCGT 58.783 61.111 14.87 0.00 46.65 5.28
467 468 2.796383 CGAAGTGAGGTCGATGATGGAC 60.796 54.545 0.00 0.00 41.02 4.02
468 469 1.405463 CGAAGTGAGGTCGATGATGGA 59.595 52.381 0.00 0.00 41.02 3.41
469 470 1.405463 TCGAAGTGAGGTCGATGATGG 59.595 52.381 0.00 0.00 42.31 3.51
470 471 2.851805 TCGAAGTGAGGTCGATGATG 57.148 50.000 0.00 0.00 42.31 3.07
475 476 1.301953 TCGGTCGAAGTGAGGTCGA 60.302 57.895 0.00 0.00 44.82 4.20
476 477 1.154263 GTCGGTCGAAGTGAGGTCG 60.154 63.158 0.00 0.00 39.88 4.79
477 478 1.154263 CGTCGGTCGAAGTGAGGTC 60.154 63.158 0.00 0.00 42.86 3.85
478 479 1.598962 TCGTCGGTCGAAGTGAGGT 60.599 57.895 6.24 0.00 45.98 3.85
479 480 3.260931 TCGTCGGTCGAAGTGAGG 58.739 61.111 6.24 0.00 45.98 3.86
486 487 1.579698 CTATCTTCCTCGTCGGTCGA 58.420 55.000 0.00 0.00 46.83 4.20
487 488 0.587285 CCTATCTTCCTCGTCGGTCG 59.413 60.000 0.00 0.00 41.41 4.79
488 489 0.953003 CCCTATCTTCCTCGTCGGTC 59.047 60.000 0.00 0.00 0.00 4.79
489 490 1.108132 GCCCTATCTTCCTCGTCGGT 61.108 60.000 0.00 0.00 0.00 4.69
490 491 1.107538 TGCCCTATCTTCCTCGTCGG 61.108 60.000 0.00 0.00 0.00 4.79
491 492 0.962489 ATGCCCTATCTTCCTCGTCG 59.038 55.000 0.00 0.00 0.00 5.12
492 493 1.001406 CCATGCCCTATCTTCCTCGTC 59.999 57.143 0.00 0.00 0.00 4.20
493 494 1.051812 CCATGCCCTATCTTCCTCGT 58.948 55.000 0.00 0.00 0.00 4.18
494 495 0.322975 CCCATGCCCTATCTTCCTCG 59.677 60.000 0.00 0.00 0.00 4.63
495 496 1.627834 CTCCCATGCCCTATCTTCCTC 59.372 57.143 0.00 0.00 0.00 3.71
496 497 1.224120 TCTCCCATGCCCTATCTTCCT 59.776 52.381 0.00 0.00 0.00 3.36
497 498 1.349357 GTCTCCCATGCCCTATCTTCC 59.651 57.143 0.00 0.00 0.00 3.46
498 499 1.001406 CGTCTCCCATGCCCTATCTTC 59.999 57.143 0.00 0.00 0.00 2.87
499 500 1.051812 CGTCTCCCATGCCCTATCTT 58.948 55.000 0.00 0.00 0.00 2.40
500 501 0.188587 TCGTCTCCCATGCCCTATCT 59.811 55.000 0.00 0.00 0.00 1.98
501 502 0.318762 GTCGTCTCCCATGCCCTATC 59.681 60.000 0.00 0.00 0.00 2.08
502 503 1.122019 GGTCGTCTCCCATGCCCTAT 61.122 60.000 0.00 0.00 0.00 2.57
503 504 1.760875 GGTCGTCTCCCATGCCCTA 60.761 63.158 0.00 0.00 0.00 3.53
504 505 3.083997 GGTCGTCTCCCATGCCCT 61.084 66.667 0.00 0.00 0.00 5.19
505 506 4.530857 CGGTCGTCTCCCATGCCC 62.531 72.222 0.00 0.00 0.00 5.36
515 516 3.332493 TACTCAAGGCGCGGTCGTC 62.332 63.158 8.83 0.00 41.36 4.20
516 517 3.367743 TACTCAAGGCGCGGTCGT 61.368 61.111 8.83 0.00 38.14 4.34
517 518 2.879462 GTACTCAAGGCGCGGTCG 60.879 66.667 8.83 0.00 39.07 4.79
518 519 2.508663 GGTACTCAAGGCGCGGTC 60.509 66.667 8.83 0.00 0.00 4.79
519 520 2.656069 ATGGTACTCAAGGCGCGGT 61.656 57.895 8.83 0.00 0.00 5.68
520 521 2.173669 CATGGTACTCAAGGCGCGG 61.174 63.158 8.83 0.00 0.00 6.46
521 522 1.148157 CTCATGGTACTCAAGGCGCG 61.148 60.000 0.00 0.00 0.00 6.86
522 523 1.432270 GCTCATGGTACTCAAGGCGC 61.432 60.000 0.00 0.00 0.00 6.53
523 524 0.811616 GGCTCATGGTACTCAAGGCG 60.812 60.000 0.00 0.00 0.00 5.52
524 525 0.811616 CGGCTCATGGTACTCAAGGC 60.812 60.000 0.00 0.00 0.00 4.35
525 526 0.179073 CCGGCTCATGGTACTCAAGG 60.179 60.000 0.00 0.00 0.00 3.61
526 527 0.537188 ACCGGCTCATGGTACTCAAG 59.463 55.000 0.00 0.00 38.15 3.02
527 528 0.249120 CACCGGCTCATGGTACTCAA 59.751 55.000 0.00 0.00 37.72 3.02
528 529 1.897423 CACCGGCTCATGGTACTCA 59.103 57.895 0.00 0.00 37.72 3.41
529 530 1.521681 GCACCGGCTCATGGTACTC 60.522 63.158 0.00 0.00 37.72 2.59
530 531 2.584608 GCACCGGCTCATGGTACT 59.415 61.111 0.00 0.00 37.72 2.73
531 532 2.890474 CGCACCGGCTCATGGTAC 60.890 66.667 0.00 0.00 37.72 3.34
532 533 3.387091 ACGCACCGGCTCATGGTA 61.387 61.111 0.00 0.00 37.72 3.25
535 536 3.027170 GAACACGCACCGGCTCATG 62.027 63.158 0.00 0.00 38.10 3.07
536 537 2.742372 GAACACGCACCGGCTCAT 60.742 61.111 0.00 0.00 38.10 2.90
537 538 4.980805 GGAACACGCACCGGCTCA 62.981 66.667 0.00 0.00 38.10 4.26
538 539 4.681978 AGGAACACGCACCGGCTC 62.682 66.667 0.00 0.00 38.10 4.70
539 540 4.250305 AAGGAACACGCACCGGCT 62.250 61.111 0.00 0.00 38.10 5.52
540 541 4.025401 CAAGGAACACGCACCGGC 62.025 66.667 0.00 0.00 0.00 6.13
541 542 2.590575 ACAAGGAACACGCACCGG 60.591 61.111 0.00 0.00 0.00 5.28
542 543 2.604174 GGACAAGGAACACGCACCG 61.604 63.158 0.00 0.00 0.00 4.94
543 544 0.034337 TAGGACAAGGAACACGCACC 59.966 55.000 0.00 0.00 0.00 5.01
544 545 1.145803 GTAGGACAAGGAACACGCAC 58.854 55.000 0.00 0.00 0.00 5.34
545 546 1.000506 GAGTAGGACAAGGAACACGCA 59.999 52.381 0.00 0.00 0.00 5.24
546 547 1.272769 AGAGTAGGACAAGGAACACGC 59.727 52.381 0.00 0.00 0.00 5.34
547 548 3.757493 AGTAGAGTAGGACAAGGAACACG 59.243 47.826 0.00 0.00 0.00 4.49
548 549 5.619533 CGAAGTAGAGTAGGACAAGGAACAC 60.620 48.000 0.00 0.00 0.00 3.32
549 550 4.458295 CGAAGTAGAGTAGGACAAGGAACA 59.542 45.833 0.00 0.00 0.00 3.18
550 551 4.674885 GCGAAGTAGAGTAGGACAAGGAAC 60.675 50.000 0.00 0.00 0.00 3.62
551 552 3.442977 GCGAAGTAGAGTAGGACAAGGAA 59.557 47.826 0.00 0.00 0.00 3.36
552 553 3.015327 GCGAAGTAGAGTAGGACAAGGA 58.985 50.000 0.00 0.00 0.00 3.36
553 554 3.018149 AGCGAAGTAGAGTAGGACAAGG 58.982 50.000 0.00 0.00 0.00 3.61
554 555 3.181495 CCAGCGAAGTAGAGTAGGACAAG 60.181 52.174 0.00 0.00 0.00 3.16
555 556 2.753452 CCAGCGAAGTAGAGTAGGACAA 59.247 50.000 0.00 0.00 0.00 3.18
556 557 2.366533 CCAGCGAAGTAGAGTAGGACA 58.633 52.381 0.00 0.00 0.00 4.02
557 558 1.065851 GCCAGCGAAGTAGAGTAGGAC 59.934 57.143 0.00 0.00 0.00 3.85
558 559 1.340697 TGCCAGCGAAGTAGAGTAGGA 60.341 52.381 0.00 0.00 0.00 2.94
559 560 1.103803 TGCCAGCGAAGTAGAGTAGG 58.896 55.000 0.00 0.00 0.00 3.18
560 561 2.531206 GTTGCCAGCGAAGTAGAGTAG 58.469 52.381 0.00 0.00 0.00 2.57
561 562 1.203994 GGTTGCCAGCGAAGTAGAGTA 59.796 52.381 0.00 0.00 0.00 2.59
562 563 0.037232 GGTTGCCAGCGAAGTAGAGT 60.037 55.000 0.00 0.00 0.00 3.24
563 564 2.755929 GGTTGCCAGCGAAGTAGAG 58.244 57.895 0.00 0.00 0.00 2.43
572 573 4.645921 GTTGGTGCGGTTGCCAGC 62.646 66.667 0.00 0.00 41.78 4.85
573 574 3.215568 TGTTGGTGCGGTTGCCAG 61.216 61.111 0.00 0.00 41.78 4.85
574 575 3.522731 GTGTTGGTGCGGTTGCCA 61.523 61.111 0.00 0.00 41.78 4.92
575 576 2.781158 AAGTGTTGGTGCGGTTGCC 61.781 57.895 0.00 0.00 41.78 4.52
576 577 1.588667 CAAGTGTTGGTGCGGTTGC 60.589 57.895 0.00 0.00 43.20 4.17
577 578 1.065600 CCAAGTGTTGGTGCGGTTG 59.934 57.895 0.00 0.00 45.93 3.77
578 579 3.520402 CCAAGTGTTGGTGCGGTT 58.480 55.556 0.00 0.00 45.93 4.44
586 587 1.882352 GCTACACCCCTCCAAGTGTTG 60.882 57.143 0.62 0.98 44.65 3.33
587 588 0.400594 GCTACACCCCTCCAAGTGTT 59.599 55.000 0.62 0.00 44.65 3.32
589 590 1.299976 GGCTACACCCCTCCAAGTG 59.700 63.158 0.00 0.00 39.93 3.16
590 591 1.151899 TGGCTACACCCCTCCAAGT 60.152 57.895 0.00 0.00 37.83 3.16
591 592 1.604378 CTGGCTACACCCCTCCAAG 59.396 63.158 0.00 0.00 37.83 3.61
592 593 2.602676 GCTGGCTACACCCCTCCAA 61.603 63.158 0.00 0.00 37.83 3.53
593 594 3.009115 GCTGGCTACACCCCTCCA 61.009 66.667 0.00 0.00 37.83 3.86
594 595 3.798511 GGCTGGCTACACCCCTCC 61.799 72.222 0.00 0.00 37.83 4.30
595 596 4.162690 CGGCTGGCTACACCCCTC 62.163 72.222 0.00 0.00 37.83 4.30
597 598 4.468689 GACGGCTGGCTACACCCC 62.469 72.222 0.00 0.00 37.83 4.95
598 599 4.814294 CGACGGCTGGCTACACCC 62.814 72.222 0.00 0.00 37.83 4.61
599 600 2.703798 TACGACGGCTGGCTACACC 61.704 63.158 0.00 0.00 39.84 4.16
600 601 1.515736 GTACGACGGCTGGCTACAC 60.516 63.158 0.00 0.00 0.00 2.90
601 602 1.317431 ATGTACGACGGCTGGCTACA 61.317 55.000 11.56 11.56 0.00 2.74
602 603 0.664761 TATGTACGACGGCTGGCTAC 59.335 55.000 0.00 0.00 0.00 3.58
603 604 0.949397 CTATGTACGACGGCTGGCTA 59.051 55.000 0.00 0.00 0.00 3.93
604 605 1.734137 CTATGTACGACGGCTGGCT 59.266 57.895 0.00 0.00 0.00 4.75
605 606 1.299926 CCTATGTACGACGGCTGGC 60.300 63.158 0.00 0.00 0.00 4.85
606 607 1.299926 GCCTATGTACGACGGCTGG 60.300 63.158 10.74 0.00 39.42 4.85
607 608 4.320971 GCCTATGTACGACGGCTG 57.679 61.111 10.74 0.00 39.42 4.85
609 610 0.594284 GTCAGCCTATGTACGACGGC 60.594 60.000 10.19 10.19 42.79 5.68
610 611 0.316772 CGTCAGCCTATGTACGACGG 60.317 60.000 0.00 0.58 44.21 4.79
611 612 0.316772 CCGTCAGCCTATGTACGACG 60.317 60.000 9.39 9.39 46.71 5.12
612 613 0.594284 GCCGTCAGCCTATGTACGAC 60.594 60.000 0.00 0.00 35.68 4.34
613 614 1.731700 GCCGTCAGCCTATGTACGA 59.268 57.895 0.00 0.00 35.68 3.43
614 615 1.657487 CGCCGTCAGCCTATGTACG 60.657 63.158 0.00 0.00 38.78 3.67
615 616 1.949631 GCGCCGTCAGCCTATGTAC 60.950 63.158 0.00 0.00 38.78 2.90
616 617 2.125326 AGCGCCGTCAGCCTATGTA 61.125 57.895 2.29 0.00 38.78 2.29
617 618 3.461773 AGCGCCGTCAGCCTATGT 61.462 61.111 2.29 0.00 38.78 2.29
618 619 2.349969 TACAGCGCCGTCAGCCTATG 62.350 60.000 2.29 0.00 38.78 2.23
619 620 1.464376 ATACAGCGCCGTCAGCCTAT 61.464 55.000 2.29 0.00 38.78 2.57
620 621 0.820482 TATACAGCGCCGTCAGCCTA 60.820 55.000 2.29 0.00 38.78 3.93
621 622 2.076622 CTATACAGCGCCGTCAGCCT 62.077 60.000 2.29 0.00 38.78 4.58
622 623 1.661821 CTATACAGCGCCGTCAGCC 60.662 63.158 2.29 0.00 38.78 4.85
623 624 2.303676 GCTATACAGCGCCGTCAGC 61.304 63.158 12.78 12.78 38.22 4.26
624 625 3.923614 GCTATACAGCGCCGTCAG 58.076 61.111 2.29 2.00 38.22 3.51
675 676 1.555075 CACGGGGTATCATATGGGAGG 59.445 57.143 2.13 0.00 0.00 4.30
692 695 0.105593 ATGGCACTCCTCATAGCACG 59.894 55.000 0.00 0.00 0.00 5.34
696 699 7.055667 TCTTTTAGTATGGCACTCCTCATAG 57.944 40.000 0.00 0.00 38.80 2.23
699 702 5.755409 TTCTTTTAGTATGGCACTCCTCA 57.245 39.130 0.00 0.00 38.80 3.86
712 715 6.194463 GCTCGTTTACGGTTTTTCTTTTAGT 58.806 36.000 2.09 0.00 40.29 2.24
713 716 5.335171 CGCTCGTTTACGGTTTTTCTTTTAG 59.665 40.000 2.09 0.00 40.29 1.85
714 717 5.196825 CGCTCGTTTACGGTTTTTCTTTTA 58.803 37.500 2.09 0.00 40.29 1.52
715 718 4.030366 CGCTCGTTTACGGTTTTTCTTTT 58.970 39.130 2.09 0.00 40.29 2.27
716 719 3.610495 CGCTCGTTTACGGTTTTTCTTT 58.390 40.909 2.09 0.00 40.29 2.52
717 720 2.600556 GCGCTCGTTTACGGTTTTTCTT 60.601 45.455 0.00 0.00 40.29 2.52
718 721 1.070376 GCGCTCGTTTACGGTTTTTCT 60.070 47.619 0.00 0.00 40.29 2.52
719 722 1.311839 GCGCTCGTTTACGGTTTTTC 58.688 50.000 0.00 0.00 40.29 2.29
720 723 0.041047 GGCGCTCGTTTACGGTTTTT 60.041 50.000 7.64 0.00 40.29 1.94
721 724 0.881600 AGGCGCTCGTTTACGGTTTT 60.882 50.000 7.64 0.00 40.29 2.43
722 725 1.301165 AGGCGCTCGTTTACGGTTT 60.301 52.632 7.64 0.00 40.29 3.27
723 726 2.025418 CAGGCGCTCGTTTACGGTT 61.025 57.895 7.64 0.00 40.29 4.44
724 727 2.431942 CAGGCGCTCGTTTACGGT 60.432 61.111 7.64 0.00 40.29 4.83
725 728 3.186047 CCAGGCGCTCGTTTACGG 61.186 66.667 7.64 0.00 40.29 4.02
726 729 3.186047 CCCAGGCGCTCGTTTACG 61.186 66.667 7.64 0.00 41.45 3.18
727 730 3.497031 GCCCAGGCGCTCGTTTAC 61.497 66.667 7.64 0.00 0.00 2.01
728 731 4.770874 GGCCCAGGCGCTCGTTTA 62.771 66.667 7.64 0.00 43.06 2.01
915 922 5.010314 GGTCAAAGTATTTTCGGGTCCTTTT 59.990 40.000 0.00 0.00 35.03 2.27
975 984 1.681780 CGGCTTCTCTGTCCTCTCTCT 60.682 57.143 0.00 0.00 0.00 3.10
976 985 0.738389 CGGCTTCTCTGTCCTCTCTC 59.262 60.000 0.00 0.00 0.00 3.20
977 986 0.682855 CCGGCTTCTCTGTCCTCTCT 60.683 60.000 0.00 0.00 0.00 3.10
978 987 1.813192 CCGGCTTCTCTGTCCTCTC 59.187 63.158 0.00 0.00 0.00 3.20
1115 1124 1.065109 GTTGGTGCGTTGGGTGTTC 59.935 57.895 0.00 0.00 0.00 3.18
1124 1133 3.216292 GCTGGTTGGTTGGTGCGT 61.216 61.111 0.00 0.00 0.00 5.24
1132 1141 2.351924 ATTGGTCCGTGCTGGTTGGT 62.352 55.000 0.00 0.00 39.52 3.67
1155 1164 3.328050 GTGAGAAAAGGGAGGAGAGGAAA 59.672 47.826 0.00 0.00 0.00 3.13
1161 1170 1.404851 GCTCGTGAGAAAAGGGAGGAG 60.405 57.143 0.00 0.00 41.32 3.69
1162 1171 0.608640 GCTCGTGAGAAAAGGGAGGA 59.391 55.000 0.00 0.00 41.32 3.71
1163 1172 0.321671 TGCTCGTGAGAAAAGGGAGG 59.678 55.000 0.00 0.00 41.32 4.30
1169 1178 1.070821 CGCATCTGCTCGTGAGAAAA 58.929 50.000 0.00 0.00 41.32 2.29
1178 1187 1.346538 GTCTTTCGCGCATCTGCTC 59.653 57.895 8.75 0.00 39.32 4.26
1196 1219 0.933047 TATCGTCGCGAAATGCCTCG 60.933 55.000 12.06 8.77 39.99 4.63
1200 1223 1.149361 TGGGTATCGTCGCGAAATGC 61.149 55.000 12.06 11.34 39.99 3.56
1224 1247 4.187694 GCGAAGAATCCAGAGACAAATCT 58.812 43.478 0.00 0.00 38.15 2.40
1262 1285 9.981114 AGTTTTGTGAAAGAAAGAAAGAAAGAA 57.019 25.926 0.00 0.00 27.82 2.52
1274 1297 8.878769 GGCAAAGAAATTAGTTTTGTGAAAGAA 58.121 29.630 9.55 0.00 34.98 2.52
1275 1298 8.257306 AGGCAAAGAAATTAGTTTTGTGAAAGA 58.743 29.630 9.55 0.00 34.98 2.52
1276 1299 8.424274 AGGCAAAGAAATTAGTTTTGTGAAAG 57.576 30.769 9.55 0.00 34.98 2.62
1282 1305 7.171508 GGGAAAGAGGCAAAGAAATTAGTTTTG 59.828 37.037 0.00 5.38 35.47 2.44
1311 1334 1.250154 TGCCCAAATCCTGCGGAAAG 61.250 55.000 0.00 0.00 34.34 2.62
1398 1422 1.674817 CGCCCGGATTGAAAGTACAGT 60.675 52.381 0.73 0.00 0.00 3.55
1402 1426 1.276989 ACTTCGCCCGGATTGAAAGTA 59.723 47.619 0.73 0.00 0.00 2.24
1403 1427 0.036306 ACTTCGCCCGGATTGAAAGT 59.964 50.000 0.73 2.27 0.00 2.66
1419 1443 0.608640 CCCGCACCTCACTAGAACTT 59.391 55.000 0.00 0.00 0.00 2.66
1420 1444 1.889530 GCCCGCACCTCACTAGAACT 61.890 60.000 0.00 0.00 0.00 3.01
1433 1457 2.664851 CACGAGTTGAAGCCCGCA 60.665 61.111 0.00 0.00 0.00 5.69
1453 1477 1.209127 CGAATCAACCCACGGCAAC 59.791 57.895 0.00 0.00 0.00 4.17
1473 1497 2.672874 TCTGCAGAATCAACGAAATCGG 59.327 45.455 15.67 0.00 44.95 4.18
1488 1512 4.504916 CGCCCGAGGAGTCTGCAG 62.505 72.222 7.63 7.63 0.00 4.41
1535 1559 2.967397 CGCCTGACTTCGGTGGTA 59.033 61.111 0.00 0.00 0.00 3.25
1614 1638 0.899720 AACGAAGCCATAAGACCGGA 59.100 50.000 9.46 0.00 0.00 5.14
1682 1707 3.610911 GGTATGTCCTCCTTCAAACAGG 58.389 50.000 0.00 0.00 34.86 4.00
1746 1883 6.432107 TCGAATTTGCACTTTTTACCTACAC 58.568 36.000 0.00 0.00 0.00 2.90
1777 1914 7.747357 GCAAACAGGATTAGCAAATGATTTTTG 59.253 33.333 0.00 0.00 0.00 2.44
1785 1923 4.761975 CCATGCAAACAGGATTAGCAAAT 58.238 39.130 0.00 0.00 38.85 2.32
1825 1970 8.474831 GCACTAAGGAACCCATTTTTGTATAAT 58.525 33.333 0.00 0.00 0.00 1.28
1829 1974 4.525100 GGCACTAAGGAACCCATTTTTGTA 59.475 41.667 0.00 0.00 0.00 2.41
1830 1975 3.323691 GGCACTAAGGAACCCATTTTTGT 59.676 43.478 0.00 0.00 0.00 2.83
1851 1996 3.091633 ACATCTGGGGACAAATCAAGG 57.908 47.619 0.00 0.00 42.06 3.61
2015 2180 0.534877 TCCCCAAATGATCGCCGATG 60.535 55.000 3.34 0.00 0.00 3.84
2034 2199 2.280389 CACGGCAGAGCAGTGTGT 60.280 61.111 12.94 0.00 46.37 3.72
2080 2246 8.076781 ACACTATCTAACTTCATATAGCACACG 58.923 37.037 0.00 0.00 0.00 4.49
2158 2324 1.684450 ACAAAACGGGGTTAGCAAAGG 59.316 47.619 0.00 0.00 0.00 3.11
2686 2886 4.891168 ACCCTTGTGTAAAGGAAAATTCGT 59.109 37.500 5.69 0.00 39.81 3.85
2778 2978 6.658816 TGTATACAGCATCAAATTCAACACCT 59.341 34.615 0.08 0.00 0.00 4.00
2874 3074 4.219070 TCAGCCAATTCAAAGACCAATGAG 59.781 41.667 0.00 0.00 0.00 2.90
2955 3155 5.893255 TGCAGCAATGATAGGGAAGTTTATT 59.107 36.000 0.00 0.00 0.00 1.40
2964 3164 4.427312 GAGTTTTTGCAGCAATGATAGGG 58.573 43.478 9.12 0.00 0.00 3.53
2965 3165 4.100529 CGAGTTTTTGCAGCAATGATAGG 58.899 43.478 9.12 0.00 0.00 2.57
2966 3166 3.545078 GCGAGTTTTTGCAGCAATGATAG 59.455 43.478 9.12 0.92 33.62 2.08
3025 3225 1.340600 CCCTTAATCAGGTCCCGCAAA 60.341 52.381 0.00 0.00 42.02 3.68
3036 3237 2.204463 TGGTCATGAGCCCCTTAATCA 58.796 47.619 21.58 0.00 0.00 2.57
3045 3246 5.357878 TGTCAGAAATTTATGGTCATGAGCC 59.642 40.000 21.58 13.79 0.00 4.70
3068 3291 8.219769 GCACTCTCTCGAATGTAATTTATGATG 58.780 37.037 0.00 0.00 36.07 3.07
3110 3333 4.064388 GTTTACTACCCCTGTTTGCGTTA 58.936 43.478 0.00 0.00 0.00 3.18
3111 3334 2.880268 GTTTACTACCCCTGTTTGCGTT 59.120 45.455 0.00 0.00 0.00 4.84
3114 3337 2.817844 CCAGTTTACTACCCCTGTTTGC 59.182 50.000 0.00 0.00 0.00 3.68
3125 3348 4.884668 AGCAGTAGCAACCAGTTTACTA 57.115 40.909 0.00 0.00 45.49 1.82
3127 3350 4.935808 ACATAGCAGTAGCAACCAGTTTAC 59.064 41.667 0.00 0.00 45.49 2.01
3128 3351 5.160607 ACATAGCAGTAGCAACCAGTTTA 57.839 39.130 0.00 0.00 45.49 2.01
3129 3352 4.021102 ACATAGCAGTAGCAACCAGTTT 57.979 40.909 0.00 0.00 45.49 2.66
3130 3353 3.703001 ACATAGCAGTAGCAACCAGTT 57.297 42.857 0.00 0.00 45.49 3.16
3132 3355 3.866651 AGAACATAGCAGTAGCAACCAG 58.133 45.455 0.00 0.00 45.49 4.00
3134 3357 3.623510 GGAAGAACATAGCAGTAGCAACC 59.376 47.826 0.00 0.00 45.49 3.77
3135 3358 3.623510 GGGAAGAACATAGCAGTAGCAAC 59.376 47.826 0.00 0.00 45.49 4.17
3136 3359 3.519510 AGGGAAGAACATAGCAGTAGCAA 59.480 43.478 0.00 0.00 45.49 3.91
3139 3362 3.964031 AGGAGGGAAGAACATAGCAGTAG 59.036 47.826 0.00 0.00 0.00 2.57
3171 3394 4.588528 ACACAAAATATGAGGTGGCTTTGT 59.411 37.500 0.00 0.00 37.45 2.83
3175 3398 4.307032 AGACACAAAATATGAGGTGGCT 57.693 40.909 3.99 3.99 44.49 4.75
3200 3423 7.757526 TGTATTGGTCAAATCGATGGTTAAAG 58.242 34.615 0.00 0.00 0.00 1.85
3250 3474 6.713762 TCAAAGGTGATGAGTCAATGTTTT 57.286 33.333 0.00 0.00 35.80 2.43
3252 3476 6.547141 TCTTTCAAAGGTGATGAGTCAATGTT 59.453 34.615 0.00 0.00 35.80 2.71
3359 3586 2.025981 AGCTCAATGATACAAGGCACCA 60.026 45.455 0.00 0.00 0.00 4.17
3375 3635 1.404181 GCAACACGATACCTCAGCTCA 60.404 52.381 0.00 0.00 0.00 4.26
3385 3645 3.791245 TGAGTATGCATGCAACACGATA 58.209 40.909 26.68 8.52 0.00 2.92
3456 3716 2.872245 AGATGTATGACCCGAAAATGCG 59.128 45.455 0.00 0.00 0.00 4.73
3464 3725 1.000955 GGGCTGTAGATGTATGACCCG 59.999 57.143 0.00 0.00 0.00 5.28
3469 3730 4.406648 TGTGAAGGGCTGTAGATGTATG 57.593 45.455 0.00 0.00 0.00 2.39
3470 3731 4.744867 GCATGTGAAGGGCTGTAGATGTAT 60.745 45.833 0.00 0.00 0.00 2.29
3479 3740 2.928334 AGAATAGCATGTGAAGGGCTG 58.072 47.619 0.00 0.00 38.55 4.85
3523 3784 7.170658 CCTCTTTTCCATCTTCGATAGCTTTAG 59.829 40.741 0.00 0.00 0.00 1.85
3551 3812 6.178607 TCAGCATTCTTATCATTAGGCTCA 57.821 37.500 0.00 0.00 0.00 4.26
3650 3911 6.174049 TCTTCTTTTAGCTCCTTTTAGAGGC 58.826 40.000 0.00 0.00 45.87 4.70
3698 4004 6.672218 TCAGGGTCTGATGGAACTAATAAGAA 59.328 38.462 0.00 0.00 35.39 2.52
3706 4012 5.983333 ATATTTCAGGGTCTGATGGAACT 57.017 39.130 0.00 0.00 40.39 3.01
3717 4023 6.068670 GCCCAAAGTACATATATTTCAGGGT 58.931 40.000 0.00 0.00 32.30 4.34
3718 4024 6.068010 TGCCCAAAGTACATATATTTCAGGG 58.932 40.000 0.00 0.00 32.60 4.45
3730 4036 5.123186 CGAGAACATATTTGCCCAAAGTACA 59.877 40.000 0.00 0.00 33.32 2.90
3737 4043 6.481976 CACTAATACGAGAACATATTTGCCCA 59.518 38.462 0.00 0.00 0.00 5.36
3744 4050 5.220381 CGCACCACTAATACGAGAACATAT 58.780 41.667 0.00 0.00 0.00 1.78
3751 4057 1.065701 AGAGCGCACCACTAATACGAG 59.934 52.381 11.47 0.00 0.00 4.18
3752 4058 1.065102 GAGAGCGCACCACTAATACGA 59.935 52.381 11.47 0.00 0.00 3.43
3801 4107 5.279406 CCATATTTTCAGAAACAGGCCAACA 60.279 40.000 5.01 0.00 0.00 3.33
3814 4120 4.264253 TCACTGAGCACCCATATTTTCAG 58.736 43.478 0.00 0.00 38.34 3.02
3815 4121 4.299586 TCACTGAGCACCCATATTTTCA 57.700 40.909 0.00 0.00 0.00 2.69
3816 4122 4.883585 TGATCACTGAGCACCCATATTTTC 59.116 41.667 0.00 0.00 0.00 2.29
3821 4127 2.988010 GTGATCACTGAGCACCCATA 57.012 50.000 18.83 0.00 42.26 2.74
3835 4141 4.689612 TTACCATAGCAGAAGGGTGATC 57.310 45.455 0.00 0.00 34.88 2.92
3846 4152 6.127703 GCTAGAGATATCGGTTTACCATAGCA 60.128 42.308 0.00 0.00 35.14 3.49
3847 4153 6.267070 GCTAGAGATATCGGTTTACCATAGC 58.733 44.000 0.00 0.31 35.14 2.97
3850 4156 5.084519 TGGCTAGAGATATCGGTTTACCAT 58.915 41.667 0.00 0.00 35.14 3.55
3851 4157 4.476297 TGGCTAGAGATATCGGTTTACCA 58.524 43.478 0.00 0.07 35.14 3.25
3854 4160 9.031537 TGATAATTGGCTAGAGATATCGGTTTA 57.968 33.333 0.00 0.00 0.00 2.01
3864 4170 7.250032 ACATATGCTGATAATTGGCTAGAGA 57.750 36.000 1.58 0.00 0.00 3.10
3865 4171 7.710044 CCTACATATGCTGATAATTGGCTAGAG 59.290 40.741 1.58 0.00 0.00 2.43
3867 4173 6.259608 GCCTACATATGCTGATAATTGGCTAG 59.740 42.308 1.58 0.00 29.71 3.42
3889 4196 8.275040 ACATTTCTTTACATGTAATCTAGGCCT 58.725 33.333 18.69 11.78 31.60 5.19
3920 4227 2.882927 ACGAATGCTAGATTACGGCA 57.117 45.000 0.00 0.00 40.32 5.69
3921 4228 3.427863 GGTTACGAATGCTAGATTACGGC 59.572 47.826 0.00 0.00 0.00 5.68
3922 4229 3.985925 GGGTTACGAATGCTAGATTACGG 59.014 47.826 0.00 0.00 0.00 4.02
3979 4290 6.761242 CGTAAGGATGGTGAGAAACATATTGA 59.239 38.462 0.00 0.00 0.00 2.57
4023 4334 4.637091 TCATGTGCACAGAATAATGAGTGG 59.363 41.667 25.84 0.15 32.80 4.00
4108 4419 6.199937 TCCAGAAATTTAGAAGCTTCATGC 57.800 37.500 27.57 9.71 43.29 4.06
4212 4526 3.302805 CGCTCATGTCGTTTGTGTTGTAA 60.303 43.478 0.00 0.00 0.00 2.41
4227 4541 5.034554 ACAATTGACTTGTTACGCTCATG 57.965 39.130 13.59 0.00 45.98 3.07
4228 4542 5.699001 TGTACAATTGACTTGTTACGCTCAT 59.301 36.000 13.59 0.00 45.98 2.90
4229 4543 5.051153 TGTACAATTGACTTGTTACGCTCA 58.949 37.500 13.59 0.00 45.98 4.26
4273 4587 9.874205 TCTTGGCATTTTTCATAGGATTTTAAG 57.126 29.630 0.00 0.00 0.00 1.85
4291 4605 0.106335 CTCCTCGCTGATCTTGGCAT 59.894 55.000 0.00 0.00 0.00 4.40
4292 4606 1.519246 CTCCTCGCTGATCTTGGCA 59.481 57.895 0.00 0.00 0.00 4.92
4293 4607 1.886777 GCTCCTCGCTGATCTTGGC 60.887 63.158 0.00 0.00 35.14 4.52
4360 4674 2.680841 CGGAACTTCCTTTGTCACACAA 59.319 45.455 6.25 0.00 36.11 3.33
4378 4692 1.140052 TCAACTTCTTCAGCAACCGGA 59.860 47.619 9.46 0.00 0.00 5.14
4414 4728 0.039074 CGGACACAGACTCAGGTGAC 60.039 60.000 7.61 2.54 38.38 3.67
4438 4752 2.486191 GGCGGATCTTGTTCTGATGGAT 60.486 50.000 0.00 0.00 0.00 3.41
4443 4757 0.537188 GGAGGCGGATCTTGTTCTGA 59.463 55.000 0.00 0.00 0.00 3.27
4504 4818 2.892425 GCGAGGCCTTCCATGTCG 60.892 66.667 6.77 5.12 32.59 4.35
4519 4833 2.278206 CAGGATGAGACCGACGCG 60.278 66.667 3.53 3.53 39.69 6.01
4600 4914 7.243487 GCAATATTTCTGAAATCGTTGACAGA 58.757 34.615 27.54 10.37 37.56 3.41
4606 4920 6.757897 TCAGGCAATATTTCTGAAATCGTT 57.242 33.333 18.22 12.02 34.97 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.