Multiple sequence alignment - TraesCS1B01G312700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G312700 chr1B 100.000 5029 0 0 1 5029 536600922 536605950 0 9287
1 TraesCS1B01G312700 chr1D 93.019 2378 100 30 2681 5029 399822454 399824794 0 3411
2 TraesCS1B01G312700 chr1D 87.978 2171 155 50 496 2626 399820219 399822323 0 2466
3 TraesCS1B01G312700 chr1A 90.771 2167 141 31 1535 3657 496294111 496296262 0 2839
4 TraesCS1B01G312700 chr1A 85.308 1266 95 42 3821 5029 496296376 496297607 0 1223
5 TraesCS1B01G312700 chr1A 90.166 661 36 13 779 1423 496293406 496294053 0 833


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G312700 chr1B 536600922 536605950 5028 False 9287.000000 9287 100.000000 1 5029 1 chr1B.!!$F1 5028
1 TraesCS1B01G312700 chr1D 399820219 399824794 4575 False 2938.500000 3411 90.498500 496 5029 2 chr1D.!!$F1 4533
2 TraesCS1B01G312700 chr1A 496293406 496297607 4201 False 1631.666667 2839 88.748333 779 5029 3 chr1A.!!$F1 4250


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
55 56 0.031616 TGGAAGCTTTTGGGTTGGGT 60.032 50.0 0.00 0.00 35.61 4.51 F
1349 1393 0.466189 CTGGGTCAAGCCGGCAATAT 60.466 55.0 31.54 8.92 38.44 1.28 F
1563 1613 0.034198 TGTTTGGAAGACGCCATCGA 59.966 50.0 0.00 0.00 37.86 3.59 F
1642 1692 0.035176 GTGGGTAAAGTGGCACCGTA 59.965 55.0 15.27 3.73 35.53 4.02 F
2358 2448 0.543749 GGACTCAACCAGCCTAGCAT 59.456 55.0 0.00 0.00 0.00 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1435 1484 0.240945 GGTGCCGTTTCCACATTCAG 59.759 55.0 0.00 0.00 34.94 3.02 R
2431 2521 0.034337 GGTGTGTTCTTCTGGCCGTA 59.966 55.0 0.00 0.00 0.00 4.02 R
2492 2582 0.181350 CTCAACAGGGGCATAGGGTC 59.819 60.0 0.00 0.00 0.00 4.46 R
3428 3599 0.245539 GATCGACAAGGACGTCCCAA 59.754 55.0 30.82 10.51 37.41 4.12 R
4193 4374 0.250901 CAACAGGACTTGGGACTGGG 60.251 60.0 0.00 0.00 36.57 4.45 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.688735 AGGTTTCAAAAGCTTCCCTGC 59.311 47.619 0.00 0.00 43.61 4.85
30 31 1.270305 GGTTTCAAAAGCTTCCCTGCC 60.270 52.381 0.00 0.00 33.81 4.85
31 32 0.673437 TTTCAAAAGCTTCCCTGCCG 59.327 50.000 0.00 0.00 0.00 5.69
32 33 1.178534 TTCAAAAGCTTCCCTGCCGG 61.179 55.000 0.00 0.00 0.00 6.13
33 34 1.903404 CAAAAGCTTCCCTGCCGGT 60.903 57.895 1.90 0.00 0.00 5.28
34 35 1.152546 AAAAGCTTCCCTGCCGGTT 60.153 52.632 1.90 0.00 0.00 4.44
35 36 0.759060 AAAAGCTTCCCTGCCGGTTT 60.759 50.000 1.90 0.00 0.00 3.27
36 37 0.759060 AAAGCTTCCCTGCCGGTTTT 60.759 50.000 1.90 0.00 0.00 2.43
37 38 1.463553 AAGCTTCCCTGCCGGTTTTG 61.464 55.000 1.90 0.00 0.00 2.44
38 39 2.931068 GCTTCCCTGCCGGTTTTGG 61.931 63.158 1.90 0.00 0.00 3.28
39 40 1.228429 CTTCCCTGCCGGTTTTGGA 60.228 57.895 1.90 1.20 0.00 3.53
40 41 0.825840 CTTCCCTGCCGGTTTTGGAA 60.826 55.000 1.90 9.81 34.15 3.53
41 42 0.825840 TTCCCTGCCGGTTTTGGAAG 60.826 55.000 1.90 0.00 34.01 3.46
42 43 2.650778 CCTGCCGGTTTTGGAAGC 59.349 61.111 1.90 0.00 32.70 3.86
43 44 1.903404 CCTGCCGGTTTTGGAAGCT 60.903 57.895 1.90 0.00 32.70 3.74
44 45 1.463553 CCTGCCGGTTTTGGAAGCTT 61.464 55.000 1.90 0.00 32.70 3.74
45 46 0.389025 CTGCCGGTTTTGGAAGCTTT 59.611 50.000 1.90 0.00 0.00 3.51
46 47 0.827368 TGCCGGTTTTGGAAGCTTTT 59.173 45.000 1.90 0.00 0.00 2.27
47 48 1.217001 GCCGGTTTTGGAAGCTTTTG 58.783 50.000 1.90 0.00 0.00 2.44
48 49 1.864565 CCGGTTTTGGAAGCTTTTGG 58.135 50.000 0.00 0.00 0.00 3.28
49 50 1.540146 CCGGTTTTGGAAGCTTTTGGG 60.540 52.381 0.00 0.00 0.00 4.12
50 51 1.138069 CGGTTTTGGAAGCTTTTGGGT 59.862 47.619 0.00 0.00 0.00 4.51
51 52 2.419436 CGGTTTTGGAAGCTTTTGGGTT 60.419 45.455 0.00 0.00 38.46 4.11
52 53 2.942376 GGTTTTGGAAGCTTTTGGGTTG 59.058 45.455 0.00 0.00 35.61 3.77
53 54 2.942376 GTTTTGGAAGCTTTTGGGTTGG 59.058 45.455 0.00 0.00 35.61 3.77
54 55 1.127343 TTGGAAGCTTTTGGGTTGGG 58.873 50.000 0.00 0.00 35.61 4.12
55 56 0.031616 TGGAAGCTTTTGGGTTGGGT 60.032 50.000 0.00 0.00 35.61 4.51
56 57 1.128200 GGAAGCTTTTGGGTTGGGTT 58.872 50.000 0.00 0.00 35.61 4.11
57 58 1.488812 GGAAGCTTTTGGGTTGGGTTT 59.511 47.619 0.00 0.00 35.61 3.27
58 59 2.092646 GGAAGCTTTTGGGTTGGGTTTT 60.093 45.455 0.00 0.00 35.61 2.43
59 60 3.134985 GGAAGCTTTTGGGTTGGGTTTTA 59.865 43.478 0.00 0.00 35.61 1.52
60 61 4.202419 GGAAGCTTTTGGGTTGGGTTTTAT 60.202 41.667 0.00 0.00 35.61 1.40
61 62 5.373222 GAAGCTTTTGGGTTGGGTTTTATT 58.627 37.500 0.00 0.00 35.61 1.40
62 63 5.381184 AGCTTTTGGGTTGGGTTTTATTT 57.619 34.783 0.00 0.00 0.00 1.40
63 64 5.761205 AGCTTTTGGGTTGGGTTTTATTTT 58.239 33.333 0.00 0.00 0.00 1.82
64 65 5.825679 AGCTTTTGGGTTGGGTTTTATTTTC 59.174 36.000 0.00 0.00 0.00 2.29
65 66 5.825679 GCTTTTGGGTTGGGTTTTATTTTCT 59.174 36.000 0.00 0.00 0.00 2.52
66 67 6.993308 GCTTTTGGGTTGGGTTTTATTTTCTA 59.007 34.615 0.00 0.00 0.00 2.10
67 68 7.663905 GCTTTTGGGTTGGGTTTTATTTTCTAT 59.336 33.333 0.00 0.00 0.00 1.98
68 69 9.567776 CTTTTGGGTTGGGTTTTATTTTCTATT 57.432 29.630 0.00 0.00 0.00 1.73
69 70 9.922477 TTTTGGGTTGGGTTTTATTTTCTATTT 57.078 25.926 0.00 0.00 0.00 1.40
70 71 9.922477 TTTGGGTTGGGTTTTATTTTCTATTTT 57.078 25.926 0.00 0.00 0.00 1.82
71 72 8.910351 TGGGTTGGGTTTTATTTTCTATTTTG 57.090 30.769 0.00 0.00 0.00 2.44
72 73 7.939588 TGGGTTGGGTTTTATTTTCTATTTTGG 59.060 33.333 0.00 0.00 0.00 3.28
73 74 7.392113 GGGTTGGGTTTTATTTTCTATTTTGGG 59.608 37.037 0.00 0.00 0.00 4.12
74 75 7.940137 GGTTGGGTTTTATTTTCTATTTTGGGT 59.060 33.333 0.00 0.00 0.00 4.51
75 76 9.344772 GTTGGGTTTTATTTTCTATTTTGGGTT 57.655 29.630 0.00 0.00 0.00 4.11
76 77 9.922477 TTGGGTTTTATTTTCTATTTTGGGTTT 57.078 25.926 0.00 0.00 0.00 3.27
77 78 9.922477 TGGGTTTTATTTTCTATTTTGGGTTTT 57.078 25.926 0.00 0.00 0.00 2.43
92 93 9.772973 ATTTTGGGTTTTTCAGTTTTATACTCC 57.227 29.630 0.00 0.00 33.85 3.85
93 94 6.904463 TGGGTTTTTCAGTTTTATACTCCC 57.096 37.500 0.00 0.00 35.15 4.30
94 95 6.616577 TGGGTTTTTCAGTTTTATACTCCCT 58.383 36.000 0.00 0.00 35.45 4.20
95 96 7.070629 TGGGTTTTTCAGTTTTATACTCCCTT 58.929 34.615 0.00 0.00 35.45 3.95
96 97 7.565768 TGGGTTTTTCAGTTTTATACTCCCTTT 59.434 33.333 0.00 0.00 35.45 3.11
97 98 7.870954 GGGTTTTTCAGTTTTATACTCCCTTTG 59.129 37.037 0.00 0.00 33.85 2.77
98 99 8.635328 GGTTTTTCAGTTTTATACTCCCTTTGA 58.365 33.333 0.00 0.00 33.85 2.69
99 100 9.459640 GTTTTTCAGTTTTATACTCCCTTTGAC 57.540 33.333 0.00 0.00 33.85 3.18
100 101 7.754851 TTTCAGTTTTATACTCCCTTTGACC 57.245 36.000 0.00 0.00 33.85 4.02
101 102 5.484715 TCAGTTTTATACTCCCTTTGACCG 58.515 41.667 0.00 0.00 33.85 4.79
102 103 5.012354 TCAGTTTTATACTCCCTTTGACCGT 59.988 40.000 0.00 0.00 33.85 4.83
103 104 5.704053 CAGTTTTATACTCCCTTTGACCGTT 59.296 40.000 0.00 0.00 33.85 4.44
104 105 6.875195 CAGTTTTATACTCCCTTTGACCGTTA 59.125 38.462 0.00 0.00 33.85 3.18
105 106 6.875726 AGTTTTATACTCCCTTTGACCGTTAC 59.124 38.462 0.00 0.00 28.23 2.50
106 107 6.610075 TTTATACTCCCTTTGACCGTTACT 57.390 37.500 0.00 0.00 0.00 2.24
107 108 7.716799 TTTATACTCCCTTTGACCGTTACTA 57.283 36.000 0.00 0.00 0.00 1.82
108 109 7.716799 TTATACTCCCTTTGACCGTTACTAA 57.283 36.000 0.00 0.00 0.00 2.24
109 110 6.803366 ATACTCCCTTTGACCGTTACTAAT 57.197 37.500 0.00 0.00 0.00 1.73
110 111 5.494390 ACTCCCTTTGACCGTTACTAATT 57.506 39.130 0.00 0.00 0.00 1.40
111 112 5.243207 ACTCCCTTTGACCGTTACTAATTG 58.757 41.667 0.00 0.00 0.00 2.32
112 113 5.221783 ACTCCCTTTGACCGTTACTAATTGT 60.222 40.000 0.00 0.00 0.00 2.71
113 114 5.240121 TCCCTTTGACCGTTACTAATTGTC 58.760 41.667 0.00 0.00 0.00 3.18
114 115 5.012354 TCCCTTTGACCGTTACTAATTGTCT 59.988 40.000 0.00 0.00 0.00 3.41
115 116 5.350640 CCCTTTGACCGTTACTAATTGTCTC 59.649 44.000 0.00 0.00 0.00 3.36
116 117 6.164176 CCTTTGACCGTTACTAATTGTCTCT 58.836 40.000 0.00 0.00 0.00 3.10
117 118 6.649557 CCTTTGACCGTTACTAATTGTCTCTT 59.350 38.462 0.00 0.00 0.00 2.85
118 119 7.816031 CCTTTGACCGTTACTAATTGTCTCTTA 59.184 37.037 0.00 0.00 0.00 2.10
119 120 9.367444 CTTTGACCGTTACTAATTGTCTCTTAT 57.633 33.333 0.00 0.00 0.00 1.73
120 121 9.715121 TTTGACCGTTACTAATTGTCTCTTATT 57.285 29.630 0.00 0.00 0.00 1.40
121 122 9.715121 TTGACCGTTACTAATTGTCTCTTATTT 57.285 29.630 0.00 0.00 0.00 1.40
151 152 8.639761 ACAGAGTTGTACTAAATTAGTGACAGT 58.360 33.333 15.34 8.59 39.81 3.55
152 153 9.477484 CAGAGTTGTACTAAATTAGTGACAGTT 57.523 33.333 15.34 7.82 39.81 3.16
171 172 9.573166 TGACAGTTAATATGGATGGATTAAAGG 57.427 33.333 0.00 0.00 31.17 3.11
172 173 8.940397 ACAGTTAATATGGATGGATTAAAGGG 57.060 34.615 0.00 0.00 31.17 3.95
173 174 8.732854 ACAGTTAATATGGATGGATTAAAGGGA 58.267 33.333 0.00 0.00 31.17 4.20
174 175 9.586732 CAGTTAATATGGATGGATTAAAGGGAA 57.413 33.333 0.00 0.00 31.17 3.97
258 259 7.875306 AAATTGTTCGAAAATTTGAAAAGCG 57.125 28.000 20.37 0.00 36.21 4.68
259 260 4.430407 TGTTCGAAAATTTGAAAAGCGC 57.570 36.364 0.00 0.00 32.65 5.92
260 261 4.109050 TGTTCGAAAATTTGAAAAGCGCT 58.891 34.783 2.64 2.64 32.65 5.92
261 262 4.206200 TGTTCGAAAATTTGAAAAGCGCTC 59.794 37.500 12.06 0.00 32.65 5.03
262 263 3.958704 TCGAAAATTTGAAAAGCGCTCA 58.041 36.364 12.06 0.79 0.00 4.26
263 264 4.545610 TCGAAAATTTGAAAAGCGCTCAT 58.454 34.783 12.06 1.36 0.00 2.90
264 265 4.382457 TCGAAAATTTGAAAAGCGCTCATG 59.618 37.500 12.06 0.00 0.00 3.07
265 266 4.148696 CGAAAATTTGAAAAGCGCTCATGT 59.851 37.500 12.06 0.00 0.00 3.21
266 267 5.332506 CGAAAATTTGAAAAGCGCTCATGTT 60.333 36.000 12.06 2.35 0.00 2.71
267 268 5.989551 AAATTTGAAAAGCGCTCATGTTT 57.010 30.435 12.06 7.59 0.00 2.83
268 269 5.989551 AATTTGAAAAGCGCTCATGTTTT 57.010 30.435 12.06 7.13 0.00 2.43
269 270 5.580911 ATTTGAAAAGCGCTCATGTTTTC 57.419 34.783 19.73 19.73 39.56 2.29
270 271 3.011949 TGAAAAGCGCTCATGTTTTCC 57.988 42.857 22.29 10.00 38.75 3.13
271 272 2.360483 TGAAAAGCGCTCATGTTTTCCA 59.640 40.909 22.29 11.86 38.75 3.53
272 273 3.181482 TGAAAAGCGCTCATGTTTTCCAA 60.181 39.130 22.29 7.85 38.75 3.53
273 274 3.665745 AAAGCGCTCATGTTTTCCAAT 57.334 38.095 12.06 0.00 0.00 3.16
274 275 3.665745 AAGCGCTCATGTTTTCCAATT 57.334 38.095 12.06 0.00 0.00 2.32
275 276 3.665745 AGCGCTCATGTTTTCCAATTT 57.334 38.095 2.64 0.00 0.00 1.82
276 277 3.993920 AGCGCTCATGTTTTCCAATTTT 58.006 36.364 2.64 0.00 0.00 1.82
277 278 4.379652 AGCGCTCATGTTTTCCAATTTTT 58.620 34.783 2.64 0.00 0.00 1.94
297 298 6.866179 TTTTTGTTCGCGCTTTTAGTAAAA 57.134 29.167 5.56 7.80 0.00 1.52
298 299 7.452630 TTTTTGTTCGCGCTTTTAGTAAAAT 57.547 28.000 5.56 0.00 0.00 1.82
299 300 7.452630 TTTTGTTCGCGCTTTTAGTAAAATT 57.547 28.000 5.56 0.00 0.00 1.82
300 301 6.663480 TTGTTCGCGCTTTTAGTAAAATTC 57.337 33.333 5.56 3.72 0.00 2.17
301 302 5.992729 TGTTCGCGCTTTTAGTAAAATTCT 58.007 33.333 5.56 0.00 0.00 2.40
302 303 6.432107 TGTTCGCGCTTTTAGTAAAATTCTT 58.568 32.000 5.56 0.00 0.00 2.52
303 304 6.358558 TGTTCGCGCTTTTAGTAAAATTCTTG 59.641 34.615 5.56 0.00 0.00 3.02
304 305 6.230849 TCGCGCTTTTAGTAAAATTCTTGA 57.769 33.333 5.56 2.01 0.00 3.02
305 306 6.660722 TCGCGCTTTTAGTAAAATTCTTGAA 58.339 32.000 5.56 0.00 0.00 2.69
306 307 7.133513 TCGCGCTTTTAGTAAAATTCTTGAAA 58.866 30.769 5.56 0.00 0.00 2.69
307 308 7.806014 TCGCGCTTTTAGTAAAATTCTTGAAAT 59.194 29.630 5.56 0.00 0.00 2.17
308 309 8.424731 CGCGCTTTTAGTAAAATTCTTGAAATT 58.575 29.630 5.56 0.00 0.00 1.82
321 322 9.934190 AAATTCTTGAAATTTCAAAAATGACCG 57.066 25.926 25.66 16.03 45.61 4.79
322 323 6.523676 TCTTGAAATTTCAAAAATGACCGC 57.476 33.333 28.49 0.00 45.61 5.68
323 324 6.045318 TCTTGAAATTTCAAAAATGACCGCA 58.955 32.000 28.49 7.63 45.61 5.69
324 325 6.705381 TCTTGAAATTTCAAAAATGACCGCAT 59.295 30.769 28.49 0.00 45.61 4.73
325 326 6.857777 TGAAATTTCAAAAATGACCGCATT 57.142 29.167 18.45 0.00 39.16 3.56
326 327 7.256756 TGAAATTTCAAAAATGACCGCATTT 57.743 28.000 18.45 0.00 42.76 2.32
327 328 8.370493 TGAAATTTCAAAAATGACCGCATTTA 57.630 26.923 18.45 0.00 41.96 1.40
328 329 8.830580 TGAAATTTCAAAAATGACCGCATTTAA 58.169 25.926 18.45 0.00 41.96 1.52
340 341 8.994429 ATGACCGCATTTAAAAATATGTTTGA 57.006 26.923 0.78 0.00 0.00 2.69
341 342 8.818141 TGACCGCATTTAAAAATATGTTTGAA 57.182 26.923 0.78 0.00 0.00 2.69
342 343 9.261180 TGACCGCATTTAAAAATATGTTTGAAA 57.739 25.926 0.78 0.00 0.00 2.69
368 369 9.739276 ATTTCAATAGTTGTCATAGTTCCAAGA 57.261 29.630 0.00 0.00 0.00 3.02
369 370 8.777865 TTCAATAGTTGTCATAGTTCCAAGAG 57.222 34.615 0.00 0.00 0.00 2.85
370 371 8.134202 TCAATAGTTGTCATAGTTCCAAGAGA 57.866 34.615 0.00 0.00 0.00 3.10
371 372 8.593679 TCAATAGTTGTCATAGTTCCAAGAGAA 58.406 33.333 0.00 0.00 0.00 2.87
372 373 9.388506 CAATAGTTGTCATAGTTCCAAGAGAAT 57.611 33.333 0.00 0.00 36.69 2.40
373 374 8.954950 ATAGTTGTCATAGTTCCAAGAGAATG 57.045 34.615 0.00 0.00 36.69 2.67
374 375 6.773638 AGTTGTCATAGTTCCAAGAGAATGT 58.226 36.000 0.00 0.00 36.69 2.71
375 376 7.227156 AGTTGTCATAGTTCCAAGAGAATGTT 58.773 34.615 0.00 0.00 36.69 2.71
376 377 8.375506 AGTTGTCATAGTTCCAAGAGAATGTTA 58.624 33.333 0.00 0.00 36.69 2.41
377 378 8.999431 GTTGTCATAGTTCCAAGAGAATGTTAA 58.001 33.333 0.00 0.00 36.69 2.01
378 379 9.567776 TTGTCATAGTTCCAAGAGAATGTTAAA 57.432 29.630 0.00 0.00 36.69 1.52
379 380 9.739276 TGTCATAGTTCCAAGAGAATGTTAAAT 57.261 29.630 0.00 0.00 36.69 1.40
423 424 8.783833 TTTCCAAAAATCTGTTCACATTTTCA 57.216 26.923 0.81 0.00 32.22 2.69
424 425 8.783833 TTCCAAAAATCTGTTCACATTTTCAA 57.216 26.923 0.81 0.00 32.22 2.69
425 426 8.783833 TCCAAAAATCTGTTCACATTTTCAAA 57.216 26.923 0.81 0.00 32.22 2.69
426 427 9.224267 TCCAAAAATCTGTTCACATTTTCAAAA 57.776 25.926 0.00 0.00 32.22 2.44
427 428 9.493206 CCAAAAATCTGTTCACATTTTCAAAAG 57.507 29.630 0.00 0.00 32.22 2.27
431 432 8.776376 AATCTGTTCACATTTTCAAAAGTTGT 57.224 26.923 0.00 0.00 0.00 3.32
432 433 8.776376 ATCTGTTCACATTTTCAAAAGTTGTT 57.224 26.923 0.00 0.00 0.00 2.83
433 434 8.600449 TCTGTTCACATTTTCAAAAGTTGTTT 57.400 26.923 0.00 0.00 0.00 2.83
434 435 8.494347 TCTGTTCACATTTTCAAAAGTTGTTTG 58.506 29.630 0.00 0.00 0.00 2.93
435 436 8.147642 TGTTCACATTTTCAAAAGTTGTTTGT 57.852 26.923 0.00 0.00 0.00 2.83
436 437 8.616076 TGTTCACATTTTCAAAAGTTGTTTGTT 58.384 25.926 0.00 0.00 0.00 2.83
437 438 9.444534 GTTCACATTTTCAAAAGTTGTTTGTTT 57.555 25.926 0.00 0.00 0.00 2.83
451 452 8.141835 AGTTGTTTGTTTTTGAATTCATAGGC 57.858 30.769 9.40 2.41 0.00 3.93
452 453 7.986889 AGTTGTTTGTTTTTGAATTCATAGGCT 59.013 29.630 9.40 0.00 0.00 4.58
453 454 8.611757 GTTGTTTGTTTTTGAATTCATAGGCTT 58.388 29.630 9.40 0.00 0.00 4.35
454 455 8.729805 TGTTTGTTTTTGAATTCATAGGCTTT 57.270 26.923 9.40 0.00 0.00 3.51
455 456 9.171877 TGTTTGTTTTTGAATTCATAGGCTTTT 57.828 25.926 9.40 0.00 0.00 2.27
458 459 8.954950 TGTTTTTGAATTCATAGGCTTTTTCA 57.045 26.923 9.40 0.00 0.00 2.69
459 460 9.388506 TGTTTTTGAATTCATAGGCTTTTTCAA 57.611 25.926 9.40 0.00 32.85 2.69
462 463 9.612066 TTTTGAATTCATAGGCTTTTTCAAAGT 57.388 25.926 9.40 0.00 41.40 2.66
463 464 9.612066 TTTGAATTCATAGGCTTTTTCAAAGTT 57.388 25.926 9.40 0.00 37.85 2.66
464 465 8.816640 TGAATTCATAGGCTTTTTCAAAGTTC 57.183 30.769 3.38 0.00 0.00 3.01
465 466 8.420222 TGAATTCATAGGCTTTTTCAAAGTTCA 58.580 29.630 3.38 0.00 0.00 3.18
466 467 8.593492 AATTCATAGGCTTTTTCAAAGTTCAC 57.407 30.769 0.00 0.00 0.00 3.18
467 468 5.757886 TCATAGGCTTTTTCAAAGTTCACG 58.242 37.500 0.00 0.00 0.00 4.35
468 469 5.529430 TCATAGGCTTTTTCAAAGTTCACGA 59.471 36.000 0.00 0.00 0.00 4.35
469 470 4.712122 AGGCTTTTTCAAAGTTCACGAA 57.288 36.364 0.00 0.00 0.00 3.85
470 471 4.421058 AGGCTTTTTCAAAGTTCACGAAC 58.579 39.130 1.54 1.54 41.45 3.95
471 472 4.082463 AGGCTTTTTCAAAGTTCACGAACA 60.082 37.500 12.21 0.00 43.47 3.18
472 473 4.803613 GGCTTTTTCAAAGTTCACGAACAT 59.196 37.500 12.21 0.00 43.47 2.71
473 474 5.974751 GGCTTTTTCAAAGTTCACGAACATA 59.025 36.000 12.21 0.00 43.47 2.29
474 475 6.640907 GGCTTTTTCAAAGTTCACGAACATAT 59.359 34.615 12.21 0.00 43.47 1.78
475 476 7.169140 GGCTTTTTCAAAGTTCACGAACATATT 59.831 33.333 12.21 2.07 43.47 1.28
476 477 8.539674 GCTTTTTCAAAGTTCACGAACATATTT 58.460 29.630 12.21 1.97 43.47 1.40
535 536 7.830217 TCTTACAAACATTTTCGTGATTTCG 57.170 32.000 0.00 0.00 0.00 3.46
544 545 6.196353 ACATTTTCGTGATTTCGTGAACTTTG 59.804 34.615 0.00 0.00 0.00 2.77
545 546 3.870723 TCGTGATTTCGTGAACTTTGG 57.129 42.857 0.00 0.00 0.00 3.28
546 547 2.546368 TCGTGATTTCGTGAACTTTGGG 59.454 45.455 0.00 0.00 0.00 4.12
547 548 2.350388 CGTGATTTCGTGAACTTTGGGG 60.350 50.000 0.00 0.00 0.00 4.96
548 549 2.030274 GTGATTTCGTGAACTTTGGGGG 60.030 50.000 0.00 0.00 0.00 5.40
552 553 2.438800 TCGTGAACTTTGGGGGAAAA 57.561 45.000 0.00 0.00 0.00 2.29
554 555 4.101645 TCGTGAACTTTGGGGGAAAATA 57.898 40.909 0.00 0.00 0.00 1.40
555 556 4.668636 TCGTGAACTTTGGGGGAAAATAT 58.331 39.130 0.00 0.00 0.00 1.28
556 557 4.461081 TCGTGAACTTTGGGGGAAAATATG 59.539 41.667 0.00 0.00 0.00 1.78
557 558 4.461081 CGTGAACTTTGGGGGAAAATATGA 59.539 41.667 0.00 0.00 0.00 2.15
558 559 5.127031 CGTGAACTTTGGGGGAAAATATGAT 59.873 40.000 0.00 0.00 0.00 2.45
608 611 5.964887 TTTCAAAATCGCAGACCTTTTTG 57.035 34.783 0.00 0.00 42.51 2.44
617 623 4.508861 TCGCAGACCTTTTTGTTAGTGTAC 59.491 41.667 0.00 0.00 0.00 2.90
629 635 7.663043 TTTGTTAGTGTACTTTGGGGAATTT 57.337 32.000 0.00 0.00 0.00 1.82
630 636 6.642707 TGTTAGTGTACTTTGGGGAATTTG 57.357 37.500 0.00 0.00 0.00 2.32
640 646 6.128486 ACTTTGGGGAATTTGCAAGATTTTT 58.872 32.000 0.00 0.00 0.00 1.94
669 675 5.667466 TCCCTTCGTTCCATAATACTTGTC 58.333 41.667 0.00 0.00 0.00 3.18
671 677 4.025979 CCTTCGTTCCATAATACTTGTCGC 60.026 45.833 0.00 0.00 0.00 5.19
823 854 2.448705 GCTCTTCGCTGCCGTTCTC 61.449 63.158 0.00 0.00 35.14 2.87
824 855 1.807573 CTCTTCGCTGCCGTTCTCC 60.808 63.158 0.00 0.00 35.54 3.71
1027 1059 2.182030 CCTTCGCCGTCACTCCTC 59.818 66.667 0.00 0.00 0.00 3.71
1045 1077 2.623889 CCTCCGTCCTCCATGTAAGTAG 59.376 54.545 0.00 0.00 0.00 2.57
1046 1078 2.029623 TCCGTCCTCCATGTAAGTAGC 58.970 52.381 0.00 0.00 0.00 3.58
1047 1079 1.068741 CCGTCCTCCATGTAAGTAGCC 59.931 57.143 0.00 0.00 0.00 3.93
1048 1080 1.068741 CGTCCTCCATGTAAGTAGCCC 59.931 57.143 0.00 0.00 0.00 5.19
1049 1081 1.416772 GTCCTCCATGTAAGTAGCCCC 59.583 57.143 0.00 0.00 0.00 5.80
1050 1082 1.009060 TCCTCCATGTAAGTAGCCCCA 59.991 52.381 0.00 0.00 0.00 4.96
1051 1083 1.843851 CCTCCATGTAAGTAGCCCCAA 59.156 52.381 0.00 0.00 0.00 4.12
1063 1099 2.397044 AGCCCCAACCTCAAATCAAA 57.603 45.000 0.00 0.00 0.00 2.69
1101 1137 4.590850 ACCTGTTTCTTGCTGATTTTCC 57.409 40.909 0.00 0.00 0.00 3.13
1141 1177 4.451150 GTCTGCATCCCGACGGCA 62.451 66.667 8.86 1.97 35.96 5.69
1259 1303 4.463879 CGGGCACTCTCAGGCAGG 62.464 72.222 0.00 0.00 0.00 4.85
1277 1321 1.441729 GATCGTGGGGCTCGATTCA 59.558 57.895 12.03 0.00 45.90 2.57
1278 1322 0.876342 GATCGTGGGGCTCGATTCAC 60.876 60.000 12.03 0.00 45.90 3.18
1279 1323 1.330655 ATCGTGGGGCTCGATTCACT 61.331 55.000 6.87 0.00 43.98 3.41
1283 1327 1.480954 GTGGGGCTCGATTCACTCTAA 59.519 52.381 0.00 0.00 0.00 2.10
1333 1377 2.304761 TGTTAGGCTAACAAGGACCTGG 59.695 50.000 32.00 0.00 44.95 4.45
1349 1393 0.466189 CTGGGTCAAGCCGGCAATAT 60.466 55.000 31.54 8.92 38.44 1.28
1371 1415 3.007723 TGCTGAGATAGATCAGGAATGGC 59.992 47.826 5.92 0.00 43.64 4.40
1426 1475 2.109128 TGGTGTGGTGGTTAATGTGGAT 59.891 45.455 0.00 0.00 0.00 3.41
1427 1476 3.161866 GGTGTGGTGGTTAATGTGGATT 58.838 45.455 0.00 0.00 0.00 3.01
1428 1477 4.202577 TGGTGTGGTGGTTAATGTGGATTA 60.203 41.667 0.00 0.00 0.00 1.75
1429 1478 4.398044 GGTGTGGTGGTTAATGTGGATTAG 59.602 45.833 0.00 0.00 0.00 1.73
1430 1479 5.250200 GTGTGGTGGTTAATGTGGATTAGA 58.750 41.667 0.00 0.00 0.00 2.10
1431 1480 5.123344 GTGTGGTGGTTAATGTGGATTAGAC 59.877 44.000 0.00 0.00 0.00 2.59
1432 1481 5.221945 TGTGGTGGTTAATGTGGATTAGACA 60.222 40.000 0.00 0.00 0.00 3.41
1433 1482 5.708230 GTGGTGGTTAATGTGGATTAGACAA 59.292 40.000 0.00 0.00 0.00 3.18
1434 1483 6.207810 GTGGTGGTTAATGTGGATTAGACAAA 59.792 38.462 0.00 0.00 0.00 2.83
1435 1484 6.207810 TGGTGGTTAATGTGGATTAGACAAAC 59.792 38.462 0.00 0.00 0.00 2.93
1436 1485 6.433093 GGTGGTTAATGTGGATTAGACAAACT 59.567 38.462 0.00 0.00 0.00 2.66
1437 1486 7.305474 GTGGTTAATGTGGATTAGACAAACTG 58.695 38.462 0.00 0.00 0.00 3.16
1438 1487 7.174253 GTGGTTAATGTGGATTAGACAAACTGA 59.826 37.037 0.00 0.00 0.00 3.41
1439 1488 7.721842 TGGTTAATGTGGATTAGACAAACTGAA 59.278 33.333 0.00 0.00 0.00 3.02
1440 1489 8.739972 GGTTAATGTGGATTAGACAAACTGAAT 58.260 33.333 0.00 0.00 0.00 2.57
1441 1490 9.559958 GTTAATGTGGATTAGACAAACTGAATG 57.440 33.333 0.00 0.00 0.00 2.67
1442 1491 7.765695 AATGTGGATTAGACAAACTGAATGT 57.234 32.000 0.00 0.00 0.00 2.71
1443 1492 6.558771 TGTGGATTAGACAAACTGAATGTG 57.441 37.500 0.00 0.00 0.00 3.21
1444 1493 5.473162 TGTGGATTAGACAAACTGAATGTGG 59.527 40.000 0.00 0.00 0.00 4.17
1445 1494 5.705441 GTGGATTAGACAAACTGAATGTGGA 59.295 40.000 0.00 0.00 0.00 4.02
1449 1498 4.552166 AGACAAACTGAATGTGGAAACG 57.448 40.909 0.00 0.00 0.00 3.60
1455 1504 0.466372 TGAATGTGGAAACGGCACCA 60.466 50.000 0.00 0.00 0.00 4.17
1469 1518 3.006940 CGGCACCACAAATAGCTTCTAA 58.993 45.455 0.00 0.00 0.00 2.10
1477 1526 6.884295 ACCACAAATAGCTTCTAACAATGCTA 59.116 34.615 0.00 0.00 41.40 3.49
1478 1527 7.557719 ACCACAAATAGCTTCTAACAATGCTAT 59.442 33.333 0.00 0.00 46.67 2.97
1492 1541 6.727824 ACAATGCTATATTGCCGATACTTC 57.272 37.500 6.69 0.00 32.55 3.01
1515 1564 6.970484 TCACTTTCCTCTTTCTTGTTAATGC 58.030 36.000 0.00 0.00 0.00 3.56
1519 1568 8.138074 ACTTTCCTCTTTCTTGTTAATGCTTTC 58.862 33.333 0.00 0.00 0.00 2.62
1520 1569 6.575162 TCCTCTTTCTTGTTAATGCTTTCC 57.425 37.500 0.00 0.00 0.00 3.13
1521 1570 6.306987 TCCTCTTTCTTGTTAATGCTTTCCT 58.693 36.000 0.00 0.00 0.00 3.36
1523 1572 7.942341 TCCTCTTTCTTGTTAATGCTTTCCTTA 59.058 33.333 0.00 0.00 0.00 2.69
1524 1573 8.576442 CCTCTTTCTTGTTAATGCTTTCCTTAA 58.424 33.333 0.00 0.00 0.00 1.85
1525 1574 9.965824 CTCTTTCTTGTTAATGCTTTCCTTAAA 57.034 29.630 0.00 0.00 0.00 1.52
1562 1612 1.086696 ATGTTTGGAAGACGCCATCG 58.913 50.000 0.00 0.00 37.86 3.84
1563 1613 0.034198 TGTTTGGAAGACGCCATCGA 59.966 50.000 0.00 0.00 37.86 3.59
1569 1619 2.029918 TGGAAGACGCCATCGATCTATG 60.030 50.000 0.00 0.21 39.41 2.23
1604 1654 2.437396 CCATCCCCAAATGCCAGCC 61.437 63.158 0.00 0.00 0.00 4.85
1606 1656 1.686800 ATCCCCAAATGCCAGCCAC 60.687 57.895 0.00 0.00 0.00 5.01
1620 1670 1.135315 CAGCCACGCTATTTGCACATT 60.135 47.619 0.00 0.00 43.06 2.71
1637 1687 3.034635 ACATTTTGTGGGTAAAGTGGCA 58.965 40.909 0.00 0.00 33.23 4.92
1642 1692 0.035176 GTGGGTAAAGTGGCACCGTA 59.965 55.000 15.27 3.73 35.53 4.02
1660 1722 6.483687 CACCGTAGATTAGCGCTTAAAAATT 58.516 36.000 18.68 3.18 0.00 1.82
1679 1741 8.697507 AAAAATTATCATCCTACTTGCTAGGG 57.302 34.615 0.00 0.00 42.51 3.53
1692 1754 1.926426 GCTAGGGGGCCACTGATTGT 61.926 60.000 21.33 0.00 0.00 2.71
1695 1757 0.550147 AGGGGGCCACTGATTGTACT 60.550 55.000 8.00 0.00 0.00 2.73
1765 1827 8.507249 GTTATTTTGTCATCTTCTAGTTGCTGT 58.493 33.333 0.00 0.00 0.00 4.40
1798 1873 1.270305 CGTCATGTGTTCTGTCACCCT 60.270 52.381 0.00 0.00 37.51 4.34
1857 1939 8.534333 TGCTGAACTAATAAGTACTTGACAAG 57.466 34.615 18.56 13.77 33.75 3.16
1873 1955 8.206325 ACTTGACAAGCACTAATGATCTAATG 57.794 34.615 15.24 0.00 0.00 1.90
1923 2005 1.408702 GCAACAGCTTGGTCCTTGAAA 59.591 47.619 0.00 0.00 0.00 2.69
2059 2141 9.791820 ACTACTGTAAAAACAAACAAATACACC 57.208 29.630 0.00 0.00 0.00 4.16
2089 2171 3.573967 GAGCTTCCCACCTTGATGAAAAA 59.426 43.478 0.00 0.00 0.00 1.94
2111 2193 6.453926 AAGGTTAAACCATTAAACACGTGT 57.546 33.333 17.22 17.22 40.50 4.49
2116 2198 1.950909 ACCATTAAACACGTGTGGGTG 59.049 47.619 24.16 17.49 43.54 4.61
2139 2221 1.349026 CCACATTATCTCGGCTGGGAT 59.651 52.381 13.67 13.67 0.00 3.85
2147 2237 4.713792 ATCTCGGCTGGGATAAAAGAAT 57.286 40.909 5.97 0.00 0.00 2.40
2149 2239 2.880890 CTCGGCTGGGATAAAAGAATGG 59.119 50.000 0.00 0.00 0.00 3.16
2155 2245 4.723309 CTGGGATAAAAGAATGGGAGGAG 58.277 47.826 0.00 0.00 0.00 3.69
2163 2253 9.634021 GATAAAAGAATGGGAGGAGAAAGTAAT 57.366 33.333 0.00 0.00 0.00 1.89
2167 2257 8.855804 AAGAATGGGAGGAGAAAGTAATAGTA 57.144 34.615 0.00 0.00 0.00 1.82
2209 2299 8.991243 ATGTTAATCATGAGAACAAACAATGG 57.009 30.769 22.76 0.00 36.70 3.16
2211 2301 7.866898 TGTTAATCATGAGAACAAACAATGGTG 59.133 33.333 18.78 0.00 30.37 4.17
2230 2320 2.026262 GTGTAGTGGGACCCAATCATGT 60.026 50.000 18.69 0.00 34.18 3.21
2273 2363 8.181904 TGCTAAAATTCAGGTCTTCATTTCTT 57.818 30.769 0.00 0.00 0.00 2.52
2283 2373 4.999950 GGTCTTCATTTCTTCAGAGCAAGA 59.000 41.667 0.00 0.00 34.54 3.02
2330 2420 2.882927 AGAAAAACCAGCCGAAAACC 57.117 45.000 0.00 0.00 0.00 3.27
2335 2425 1.734163 AACCAGCCGAAAACCGATAG 58.266 50.000 0.00 0.00 41.76 2.08
2337 2427 1.276989 ACCAGCCGAAAACCGATAGAA 59.723 47.619 0.00 0.00 41.76 2.10
2358 2448 0.543749 GGACTCAACCAGCCTAGCAT 59.456 55.000 0.00 0.00 0.00 3.79
2386 2476 1.575244 CAGAGCCCATACACATCACG 58.425 55.000 0.00 0.00 0.00 4.35
2431 2521 3.822735 CACAAACCAATGGACATCTGAGT 59.177 43.478 6.16 0.00 0.00 3.41
2444 2534 1.919240 TCTGAGTACGGCCAGAAGAA 58.081 50.000 2.24 0.00 36.58 2.52
2517 2607 0.625316 ATGCCCCTGTTGAGTATGCA 59.375 50.000 0.00 0.00 0.00 3.96
2592 2682 2.158900 ACAGAAGCATGATAGAACCCCG 60.159 50.000 0.00 0.00 0.00 5.73
2662 2752 5.172934 TCGCCGAACAAGTAGTTTGATATT 58.827 37.500 0.00 0.00 43.16 1.28
2812 2981 5.515106 TCTGAAATTTGTACCTTATGGGGG 58.485 41.667 0.00 0.00 40.03 5.40
2880 3049 1.551452 ACAGAGACAGTAGAGCCACC 58.449 55.000 0.00 0.00 0.00 4.61
2888 3057 0.905357 AGTAGAGCCACCATCCACAC 59.095 55.000 0.00 0.00 0.00 3.82
2911 3080 6.694411 CACCACTTGAAGAAGAAGAAATTGTG 59.306 38.462 0.00 0.00 32.98 3.33
3265 3435 2.015736 GATCTTGTGTGATCCGTGCT 57.984 50.000 0.00 0.00 37.47 4.40
3380 3551 3.100671 GGGAGAAGAGAGGAAGCAACTA 58.899 50.000 0.00 0.00 0.00 2.24
3392 3563 3.699038 GGAAGCAACTAATTGGTATGGCA 59.301 43.478 13.11 0.00 45.77 4.92
3395 3566 2.680841 GCAACTAATTGGTATGGCACGA 59.319 45.455 0.00 0.00 36.23 4.35
3412 3583 1.070758 ACGAGCAACTTCAGACCATGT 59.929 47.619 0.00 0.00 0.00 3.21
3428 3599 5.477984 AGACCATGTGTTCAATGCTACAATT 59.522 36.000 0.00 0.00 0.00 2.32
3468 3639 6.015010 CGATCCTTCCTATCAGGTGAATTAGT 60.015 42.308 0.00 0.00 36.53 2.24
3504 3675 4.455606 CTTTGTGTCTGAGTCCTCCTTTT 58.544 43.478 0.00 0.00 0.00 2.27
3548 3719 6.801539 TCATTTGTAGTGGCTTAGAACTTG 57.198 37.500 0.00 0.00 0.00 3.16
3666 3837 5.657302 AGACAGTAAAGGTACAGAATCCGAT 59.343 40.000 0.00 0.00 32.12 4.18
3708 3879 6.017109 GGAACTTCTTCTGTCAAAAGCATACA 60.017 38.462 0.00 0.00 0.00 2.29
3709 3880 6.942532 ACTTCTTCTGTCAAAAGCATACAA 57.057 33.333 0.00 0.00 0.00 2.41
3751 3922 9.905713 TGTTTAATCCAAGTAGAATTGCTAGAT 57.094 29.630 0.00 0.00 0.00 1.98
3811 3982 3.243643 GCGCATCAATACCATTTTGCTTC 59.756 43.478 0.30 0.00 0.00 3.86
3812 3983 3.483196 CGCATCAATACCATTTTGCTTCG 59.517 43.478 0.00 0.00 0.00 3.79
3942 4113 6.830838 GTGGTCCTTGATTCCTTCTGATTAAT 59.169 38.462 0.00 0.00 0.00 1.40
3983 4154 3.249687 GAACATGGGGTTCGAAGCT 57.750 52.632 25.05 5.78 45.82 3.74
4039 4213 1.192146 AGAGTTTAGCTCCGGTGGCA 61.192 55.000 20.23 7.32 45.21 4.92
4069 4243 1.425428 CGCCTCATTTCCGCAAGAC 59.575 57.895 0.00 0.00 43.02 3.01
4075 4249 2.388232 ATTTCCGCAAGACCGACGC 61.388 57.895 0.00 0.00 43.02 5.19
4116 4290 4.592942 TGCTCCAGTGCAGAAGAATATTT 58.407 39.130 0.00 0.00 38.12 1.40
4171 4352 1.144496 GCCGATGGCCATTTGCAAT 59.856 52.632 26.69 4.06 44.06 3.56
4193 4374 4.500116 GGTGCGACCGGCTCTCTC 62.500 72.222 0.00 0.00 44.05 3.20
4194 4375 4.500116 GTGCGACCGGCTCTCTCC 62.500 72.222 0.00 0.00 44.05 3.71
4294 4476 4.748102 AGCCACACCGAACATTATTATACG 59.252 41.667 0.00 0.00 0.00 3.06
4295 4477 4.746115 GCCACACCGAACATTATTATACGA 59.254 41.667 0.00 0.00 0.00 3.43
4296 4478 5.332808 GCCACACCGAACATTATTATACGAC 60.333 44.000 0.00 0.00 0.00 4.34
4297 4479 5.981315 CCACACCGAACATTATTATACGACT 59.019 40.000 0.00 0.00 0.00 4.18
4316 4498 4.058817 GACTGTGGAAGTCGAGAAATTGT 58.941 43.478 0.00 0.00 45.76 2.71
4411 4597 2.153247 CGACTGTTCTTGTCACTAACGC 59.847 50.000 0.00 0.00 34.37 4.84
4464 4662 2.005451 GCATATGGGATCGTCTCATGC 58.995 52.381 4.56 4.76 38.23 4.06
4474 4672 1.434622 CGTCTCATGCTGGCCATCAC 61.435 60.000 12.34 2.18 29.71 3.06
4512 4710 4.742201 CTGGGTCGTGCCGTGGAG 62.742 72.222 0.00 0.00 38.44 3.86
4559 4757 0.251033 AAGCCACTCAATGCAGCTGA 60.251 50.000 20.43 2.70 33.18 4.26
4642 4846 3.334751 CGCGTGCGTTCTTGACCA 61.335 61.111 6.00 0.00 34.35 4.02
4643 4847 2.248431 GCGTGCGTTCTTGACCAC 59.752 61.111 0.00 0.00 0.00 4.16
4659 4863 3.639099 CACATCTTGTGGCTGTCCT 57.361 52.632 0.00 0.00 44.27 3.85
4660 4864 1.446907 CACATCTTGTGGCTGTCCTC 58.553 55.000 0.00 0.00 44.27 3.71
4664 4868 0.687354 TCTTGTGGCTGTCCTCTTCC 59.313 55.000 0.00 0.00 0.00 3.46
4665 4869 0.397941 CTTGTGGCTGTCCTCTTCCA 59.602 55.000 0.00 0.00 0.00 3.53
4666 4870 1.004044 CTTGTGGCTGTCCTCTTCCAT 59.996 52.381 0.00 0.00 0.00 3.41
4667 4871 1.067295 TGTGGCTGTCCTCTTCCATT 58.933 50.000 0.00 0.00 0.00 3.16
4668 4872 1.003580 TGTGGCTGTCCTCTTCCATTC 59.996 52.381 0.00 0.00 0.00 2.67
4669 4873 1.003580 GTGGCTGTCCTCTTCCATTCA 59.996 52.381 0.00 0.00 0.00 2.57
4670 4874 1.918262 TGGCTGTCCTCTTCCATTCAT 59.082 47.619 0.00 0.00 0.00 2.57
4672 4876 2.570135 GCTGTCCTCTTCCATTCATCC 58.430 52.381 0.00 0.00 0.00 3.51
4674 4878 2.169352 CTGTCCTCTTCCATTCATCCGT 59.831 50.000 0.00 0.00 0.00 4.69
4675 4879 2.571653 TGTCCTCTTCCATTCATCCGTT 59.428 45.455 0.00 0.00 0.00 4.44
4677 4881 2.571653 TCCTCTTCCATTCATCCGTTGT 59.428 45.455 0.00 0.00 0.00 3.32
4678 4882 3.772572 TCCTCTTCCATTCATCCGTTGTA 59.227 43.478 0.00 0.00 0.00 2.41
4679 4883 4.408921 TCCTCTTCCATTCATCCGTTGTAT 59.591 41.667 0.00 0.00 0.00 2.29
4681 4885 6.099125 TCCTCTTCCATTCATCCGTTGTATTA 59.901 38.462 0.00 0.00 0.00 0.98
4683 4887 6.645306 TCTTCCATTCATCCGTTGTATTACA 58.355 36.000 0.00 0.00 0.00 2.41
4685 4889 4.806775 TCCATTCATCCGTTGTATTACACG 59.193 41.667 0.00 4.28 0.00 4.49
4686 4890 4.569162 CCATTCATCCGTTGTATTACACGT 59.431 41.667 13.72 0.00 0.00 4.49
4687 4891 5.749588 CCATTCATCCGTTGTATTACACGTA 59.250 40.000 13.72 3.63 0.00 3.57
4688 4892 6.291955 CCATTCATCCGTTGTATTACACGTAC 60.292 42.308 13.72 3.64 0.00 3.67
4689 4893 5.565592 TCATCCGTTGTATTACACGTACT 57.434 39.130 13.72 0.00 0.00 2.73
4694 4914 3.236754 CGTTGTATTACACGTACTCGCAG 59.763 47.826 0.00 0.00 41.18 5.18
4696 4916 4.888038 TGTATTACACGTACTCGCAGAT 57.112 40.909 0.00 0.00 41.18 2.90
4699 4919 0.654160 TACACGTACTCGCAGATCGG 59.346 55.000 0.00 0.00 41.18 4.18
4708 4928 0.173481 TCGCAGATCGGTTCCAGAAG 59.827 55.000 0.00 0.00 39.05 2.85
4719 4939 1.666189 GTTCCAGAAGGCGAATAGTGC 59.334 52.381 0.00 0.00 33.74 4.40
4722 4942 1.134699 CCAGAAGGCGAATAGTGCTGA 60.135 52.381 0.00 0.00 0.00 4.26
4725 4945 1.328986 GAAGGCGAATAGTGCTGAAGC 59.671 52.381 0.00 0.00 42.50 3.86
4730 4955 2.478134 GCGAATAGTGCTGAAGCTATGG 59.522 50.000 3.61 0.00 42.66 2.74
4781 5019 3.121738 ACCGATCCGAATAAATGGGAC 57.878 47.619 0.00 0.00 31.52 4.46
4809 5050 1.068610 TGTTTTTCTATGCACTGCCGC 60.069 47.619 0.00 0.00 0.00 6.53
4836 5077 4.024133 TCAAGTACGTACGTTGTCTTGCTA 60.024 41.667 31.68 22.64 34.08 3.49
4916 5163 2.229675 TCATATCACGCAGCTGGAAG 57.770 50.000 17.12 4.74 0.00 3.46
4932 5179 2.646117 GAAGGGAAGATCGACCGGGC 62.646 65.000 6.32 0.00 0.00 6.13
4957 5205 4.023450 CGTGAATCGTGATAGGTAAGCCTA 60.023 45.833 0.00 0.00 41.84 3.93
4984 5232 0.905357 CCGACCATCCAGAAGAGGTT 59.095 55.000 0.00 0.00 33.77 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.372343 AGCTTTTGAAACCTTCCCAAAAT 57.628 34.783 0.00 0.00 38.56 1.82
2 3 4.383661 GGAAGCTTTTGAAACCTTCCCAAA 60.384 41.667 18.65 0.00 41.64 3.28
3 4 3.133901 GGAAGCTTTTGAAACCTTCCCAA 59.866 43.478 18.65 0.00 41.64 4.12
4 5 2.698274 GGAAGCTTTTGAAACCTTCCCA 59.302 45.455 18.65 0.00 41.64 4.37
6 7 2.965831 AGGGAAGCTTTTGAAACCTTCC 59.034 45.455 20.15 20.15 44.51 3.46
7 8 3.800261 GCAGGGAAGCTTTTGAAACCTTC 60.800 47.826 0.00 8.29 32.43 3.46
8 9 2.103094 GCAGGGAAGCTTTTGAAACCTT 59.897 45.455 0.00 0.00 0.00 3.50
9 10 1.688735 GCAGGGAAGCTTTTGAAACCT 59.311 47.619 0.00 0.00 0.00 3.50
10 11 1.270305 GGCAGGGAAGCTTTTGAAACC 60.270 52.381 0.00 0.00 34.17 3.27
11 12 1.602920 CGGCAGGGAAGCTTTTGAAAC 60.603 52.381 0.00 0.00 34.17 2.78
12 13 0.673437 CGGCAGGGAAGCTTTTGAAA 59.327 50.000 0.00 0.00 34.17 2.69
13 14 1.178534 CCGGCAGGGAAGCTTTTGAA 61.179 55.000 0.00 0.00 38.47 2.69
14 15 1.603455 CCGGCAGGGAAGCTTTTGA 60.603 57.895 0.00 0.00 38.47 2.69
15 16 1.463553 AACCGGCAGGGAAGCTTTTG 61.464 55.000 8.08 1.14 43.47 2.44
16 17 0.759060 AAACCGGCAGGGAAGCTTTT 60.759 50.000 8.08 0.00 43.47 2.27
17 18 0.759060 AAAACCGGCAGGGAAGCTTT 60.759 50.000 8.08 0.00 43.47 3.51
18 19 1.152546 AAAACCGGCAGGGAAGCTT 60.153 52.632 8.08 0.00 43.47 3.74
19 20 1.903404 CAAAACCGGCAGGGAAGCT 60.903 57.895 8.08 0.00 43.47 3.74
20 21 2.650778 CAAAACCGGCAGGGAAGC 59.349 61.111 8.08 0.00 43.47 3.86
21 22 0.825840 TTCCAAAACCGGCAGGGAAG 60.826 55.000 8.08 0.00 43.47 3.46
22 23 0.825840 CTTCCAAAACCGGCAGGGAA 60.826 55.000 8.08 14.45 43.47 3.97
23 24 1.228429 CTTCCAAAACCGGCAGGGA 60.228 57.895 8.08 0.00 43.47 4.20
24 25 2.931068 GCTTCCAAAACCGGCAGGG 61.931 63.158 8.08 0.00 43.47 4.45
25 26 1.463553 AAGCTTCCAAAACCGGCAGG 61.464 55.000 0.00 0.00 45.13 4.85
26 27 0.389025 AAAGCTTCCAAAACCGGCAG 59.611 50.000 0.00 0.00 0.00 4.85
27 28 0.827368 AAAAGCTTCCAAAACCGGCA 59.173 45.000 0.00 0.00 0.00 5.69
28 29 1.217001 CAAAAGCTTCCAAAACCGGC 58.783 50.000 0.00 0.00 0.00 6.13
29 30 1.540146 CCCAAAAGCTTCCAAAACCGG 60.540 52.381 0.00 0.00 0.00 5.28
30 31 1.138069 ACCCAAAAGCTTCCAAAACCG 59.862 47.619 0.00 0.00 0.00 4.44
31 32 2.942376 CAACCCAAAAGCTTCCAAAACC 59.058 45.455 0.00 0.00 0.00 3.27
32 33 2.942376 CCAACCCAAAAGCTTCCAAAAC 59.058 45.455 0.00 0.00 0.00 2.43
33 34 2.092699 CCCAACCCAAAAGCTTCCAAAA 60.093 45.455 0.00 0.00 0.00 2.44
34 35 1.488393 CCCAACCCAAAAGCTTCCAAA 59.512 47.619 0.00 0.00 0.00 3.28
35 36 1.127343 CCCAACCCAAAAGCTTCCAA 58.873 50.000 0.00 0.00 0.00 3.53
36 37 0.031616 ACCCAACCCAAAAGCTTCCA 60.032 50.000 0.00 0.00 0.00 3.53
37 38 1.128200 AACCCAACCCAAAAGCTTCC 58.872 50.000 0.00 0.00 0.00 3.46
38 39 3.275617 AAAACCCAACCCAAAAGCTTC 57.724 42.857 0.00 0.00 0.00 3.86
39 40 5.381184 AATAAAACCCAACCCAAAAGCTT 57.619 34.783 0.00 0.00 0.00 3.74
40 41 5.381184 AAATAAAACCCAACCCAAAAGCT 57.619 34.783 0.00 0.00 0.00 3.74
41 42 5.825679 AGAAAATAAAACCCAACCCAAAAGC 59.174 36.000 0.00 0.00 0.00 3.51
42 43 9.567776 AATAGAAAATAAAACCCAACCCAAAAG 57.432 29.630 0.00 0.00 0.00 2.27
43 44 9.922477 AAATAGAAAATAAAACCCAACCCAAAA 57.078 25.926 0.00 0.00 0.00 2.44
44 45 9.922477 AAAATAGAAAATAAAACCCAACCCAAA 57.078 25.926 0.00 0.00 0.00 3.28
45 46 9.343539 CAAAATAGAAAATAAAACCCAACCCAA 57.656 29.630 0.00 0.00 0.00 4.12
46 47 7.939588 CCAAAATAGAAAATAAAACCCAACCCA 59.060 33.333 0.00 0.00 0.00 4.51
47 48 7.392113 CCCAAAATAGAAAATAAAACCCAACCC 59.608 37.037 0.00 0.00 0.00 4.11
48 49 7.940137 ACCCAAAATAGAAAATAAAACCCAACC 59.060 33.333 0.00 0.00 0.00 3.77
49 50 8.911918 ACCCAAAATAGAAAATAAAACCCAAC 57.088 30.769 0.00 0.00 0.00 3.77
50 51 9.922477 AAACCCAAAATAGAAAATAAAACCCAA 57.078 25.926 0.00 0.00 0.00 4.12
51 52 9.922477 AAAACCCAAAATAGAAAATAAAACCCA 57.078 25.926 0.00 0.00 0.00 4.51
66 67 9.772973 GGAGTATAAAACTGAAAAACCCAAAAT 57.227 29.630 0.00 0.00 39.07 1.82
67 68 8.205512 GGGAGTATAAAACTGAAAAACCCAAAA 58.794 33.333 0.00 0.00 39.07 2.44
68 69 7.565768 AGGGAGTATAAAACTGAAAAACCCAAA 59.434 33.333 0.00 0.00 39.07 3.28
69 70 7.070629 AGGGAGTATAAAACTGAAAAACCCAA 58.929 34.615 0.00 0.00 39.07 4.12
70 71 6.616577 AGGGAGTATAAAACTGAAAAACCCA 58.383 36.000 0.00 0.00 39.07 4.51
71 72 7.534723 AAGGGAGTATAAAACTGAAAAACCC 57.465 36.000 0.00 0.00 39.07 4.11
72 73 8.635328 TCAAAGGGAGTATAAAACTGAAAAACC 58.365 33.333 0.00 0.00 39.07 3.27
73 74 9.459640 GTCAAAGGGAGTATAAAACTGAAAAAC 57.540 33.333 0.00 0.00 39.07 2.43
74 75 8.635328 GGTCAAAGGGAGTATAAAACTGAAAAA 58.365 33.333 0.00 0.00 39.07 1.94
75 76 7.040961 CGGTCAAAGGGAGTATAAAACTGAAAA 60.041 37.037 0.00 0.00 39.07 2.29
76 77 6.428771 CGGTCAAAGGGAGTATAAAACTGAAA 59.571 38.462 0.00 0.00 39.07 2.69
77 78 5.935789 CGGTCAAAGGGAGTATAAAACTGAA 59.064 40.000 0.00 0.00 39.07 3.02
78 79 5.012354 ACGGTCAAAGGGAGTATAAAACTGA 59.988 40.000 0.00 0.00 39.07 3.41
79 80 5.243207 ACGGTCAAAGGGAGTATAAAACTG 58.757 41.667 0.00 0.00 39.07 3.16
80 81 5.494390 ACGGTCAAAGGGAGTATAAAACT 57.506 39.130 0.00 0.00 42.80 2.66
81 82 6.875726 AGTAACGGTCAAAGGGAGTATAAAAC 59.124 38.462 0.00 0.00 0.00 2.43
82 83 7.008021 AGTAACGGTCAAAGGGAGTATAAAA 57.992 36.000 0.00 0.00 0.00 1.52
83 84 6.610075 AGTAACGGTCAAAGGGAGTATAAA 57.390 37.500 0.00 0.00 0.00 1.40
84 85 7.716799 TTAGTAACGGTCAAAGGGAGTATAA 57.283 36.000 0.00 0.00 0.00 0.98
85 86 7.902920 ATTAGTAACGGTCAAAGGGAGTATA 57.097 36.000 0.00 0.00 0.00 1.47
86 87 6.803366 ATTAGTAACGGTCAAAGGGAGTAT 57.197 37.500 0.00 0.00 0.00 2.12
87 88 6.014327 ACAATTAGTAACGGTCAAAGGGAGTA 60.014 38.462 0.00 0.00 0.00 2.59
88 89 5.221783 ACAATTAGTAACGGTCAAAGGGAGT 60.222 40.000 0.00 0.00 0.00 3.85
89 90 5.243207 ACAATTAGTAACGGTCAAAGGGAG 58.757 41.667 0.00 0.00 0.00 4.30
90 91 5.012354 AGACAATTAGTAACGGTCAAAGGGA 59.988 40.000 14.72 0.00 0.00 4.20
91 92 5.243207 AGACAATTAGTAACGGTCAAAGGG 58.757 41.667 14.72 0.00 0.00 3.95
92 93 6.164176 AGAGACAATTAGTAACGGTCAAAGG 58.836 40.000 14.72 0.00 0.00 3.11
93 94 7.653767 AAGAGACAATTAGTAACGGTCAAAG 57.346 36.000 14.72 0.00 0.00 2.77
94 95 9.715121 AATAAGAGACAATTAGTAACGGTCAAA 57.285 29.630 14.72 2.34 0.00 2.69
95 96 9.715121 AAATAAGAGACAATTAGTAACGGTCAA 57.285 29.630 14.72 2.59 0.00 3.18
125 126 8.639761 ACTGTCACTAATTTAGTACAACTCTGT 58.360 33.333 8.71 5.83 37.23 3.41
126 127 9.477484 AACTGTCACTAATTTAGTACAACTCTG 57.523 33.333 8.71 5.36 37.23 3.35
145 146 9.573166 CCTTTAATCCATCCATATTAACTGTCA 57.427 33.333 0.00 0.00 29.58 3.58
146 147 9.014297 CCCTTTAATCCATCCATATTAACTGTC 57.986 37.037 0.00 0.00 29.58 3.51
147 148 8.732854 TCCCTTTAATCCATCCATATTAACTGT 58.267 33.333 0.00 0.00 29.58 3.55
148 149 9.586732 TTCCCTTTAATCCATCCATATTAACTG 57.413 33.333 0.00 0.00 29.58 3.16
232 233 8.784176 CGCTTTTCAAATTTTCGAACAATTTTT 58.216 25.926 19.39 3.12 32.57 1.94
233 234 7.045031 GCGCTTTTCAAATTTTCGAACAATTTT 60.045 29.630 19.39 7.66 32.57 1.82
234 235 6.410625 GCGCTTTTCAAATTTTCGAACAATTT 59.589 30.769 17.64 17.64 34.75 1.82
235 236 5.901336 GCGCTTTTCAAATTTTCGAACAATT 59.099 32.000 0.00 5.02 0.00 2.32
236 237 5.234116 AGCGCTTTTCAAATTTTCGAACAAT 59.766 32.000 2.64 0.00 0.00 2.71
237 238 4.564769 AGCGCTTTTCAAATTTTCGAACAA 59.435 33.333 2.64 0.00 0.00 2.83
238 239 4.109050 AGCGCTTTTCAAATTTTCGAACA 58.891 34.783 2.64 0.00 0.00 3.18
239 240 4.206200 TGAGCGCTTTTCAAATTTTCGAAC 59.794 37.500 13.26 0.00 0.00 3.95
240 241 4.355437 TGAGCGCTTTTCAAATTTTCGAA 58.645 34.783 13.26 0.00 0.00 3.71
241 242 3.958704 TGAGCGCTTTTCAAATTTTCGA 58.041 36.364 13.26 0.00 0.00 3.71
242 243 4.148696 ACATGAGCGCTTTTCAAATTTTCG 59.851 37.500 13.26 0.00 0.00 3.46
243 244 5.580911 ACATGAGCGCTTTTCAAATTTTC 57.419 34.783 13.26 0.00 0.00 2.29
244 245 5.989551 AACATGAGCGCTTTTCAAATTTT 57.010 30.435 13.26 0.00 0.00 1.82
245 246 5.989551 AAACATGAGCGCTTTTCAAATTT 57.010 30.435 13.26 7.67 0.00 1.82
246 247 5.050159 GGAAAACATGAGCGCTTTTCAAATT 60.050 36.000 24.97 11.74 36.17 1.82
247 248 4.448732 GGAAAACATGAGCGCTTTTCAAAT 59.551 37.500 24.97 7.62 36.17 2.32
248 249 3.801594 GGAAAACATGAGCGCTTTTCAAA 59.198 39.130 24.97 5.38 36.17 2.69
249 250 3.181482 TGGAAAACATGAGCGCTTTTCAA 60.181 39.130 24.97 16.13 36.17 2.69
250 251 2.360483 TGGAAAACATGAGCGCTTTTCA 59.640 40.909 24.97 15.25 36.17 2.69
251 252 3.011949 TGGAAAACATGAGCGCTTTTC 57.988 42.857 13.26 16.86 34.48 2.29
252 253 3.451141 TTGGAAAACATGAGCGCTTTT 57.549 38.095 13.26 7.69 0.00 2.27
253 254 3.665745 ATTGGAAAACATGAGCGCTTT 57.334 38.095 13.26 0.00 0.00 3.51
254 255 3.665745 AATTGGAAAACATGAGCGCTT 57.334 38.095 13.26 0.00 0.00 4.68
255 256 3.665745 AAATTGGAAAACATGAGCGCT 57.334 38.095 11.27 11.27 0.00 5.92
256 257 4.730600 AAAAATTGGAAAACATGAGCGC 57.269 36.364 0.00 0.00 0.00 5.92
274 275 6.866179 TTTTACTAAAAGCGCGAACAAAAA 57.134 29.167 12.10 2.01 0.00 1.94
275 276 7.432838 AGAATTTTACTAAAAGCGCGAACAAAA 59.567 29.630 12.10 4.38 33.22 2.44
276 277 6.913673 AGAATTTTACTAAAAGCGCGAACAAA 59.086 30.769 12.10 0.00 33.22 2.83
277 278 6.432107 AGAATTTTACTAAAAGCGCGAACAA 58.568 32.000 12.10 0.00 33.22 2.83
278 279 5.992729 AGAATTTTACTAAAAGCGCGAACA 58.007 33.333 12.10 0.00 33.22 3.18
279 280 6.575942 TCAAGAATTTTACTAAAAGCGCGAAC 59.424 34.615 12.10 0.00 33.22 3.95
280 281 6.660722 TCAAGAATTTTACTAAAAGCGCGAA 58.339 32.000 12.10 0.00 33.22 4.70
281 282 6.230849 TCAAGAATTTTACTAAAAGCGCGA 57.769 33.333 12.10 0.00 33.22 5.87
282 283 6.904954 TTCAAGAATTTTACTAAAAGCGCG 57.095 33.333 0.00 0.00 33.22 6.86
295 296 9.934190 CGGTCATTTTTGAAATTTCAAGAATTT 57.066 25.926 31.72 19.38 44.59 1.82
296 297 8.069574 GCGGTCATTTTTGAAATTTCAAGAATT 58.930 29.630 31.72 20.81 44.59 2.17
297 298 7.226325 TGCGGTCATTTTTGAAATTTCAAGAAT 59.774 29.630 29.95 29.95 46.53 2.40
298 299 6.536582 TGCGGTCATTTTTGAAATTTCAAGAA 59.463 30.769 28.70 28.70 46.68 2.52
299 300 6.045318 TGCGGTCATTTTTGAAATTTCAAGA 58.955 32.000 27.52 22.70 46.68 3.02
300 301 6.284475 TGCGGTCATTTTTGAAATTTCAAG 57.716 33.333 27.52 18.65 46.68 3.02
301 302 6.857777 ATGCGGTCATTTTTGAAATTTCAA 57.142 29.167 26.01 26.01 44.78 2.69
302 303 6.857777 AATGCGGTCATTTTTGAAATTTCA 57.142 29.167 16.91 16.91 39.78 2.69
314 315 9.429359 TCAAACATATTTTTAAATGCGGTCATT 57.571 25.926 0.00 0.00 44.32 2.57
315 316 8.994429 TCAAACATATTTTTAAATGCGGTCAT 57.006 26.923 0.00 0.00 33.53 3.06
316 317 8.818141 TTCAAACATATTTTTAAATGCGGTCA 57.182 26.923 0.00 0.00 0.00 4.02
342 343 9.739276 TCTTGGAACTATGACAACTATTGAAAT 57.261 29.630 0.00 0.00 0.00 2.17
343 344 9.219603 CTCTTGGAACTATGACAACTATTGAAA 57.780 33.333 0.00 0.00 0.00 2.69
344 345 8.593679 TCTCTTGGAACTATGACAACTATTGAA 58.406 33.333 0.00 0.00 0.00 2.69
345 346 8.134202 TCTCTTGGAACTATGACAACTATTGA 57.866 34.615 0.00 0.00 0.00 2.57
346 347 8.777865 TTCTCTTGGAACTATGACAACTATTG 57.222 34.615 0.00 0.00 0.00 1.90
347 348 9.388506 CATTCTCTTGGAACTATGACAACTATT 57.611 33.333 0.00 0.00 36.70 1.73
348 349 8.543774 ACATTCTCTTGGAACTATGACAACTAT 58.456 33.333 0.00 0.00 36.70 2.12
349 350 7.907389 ACATTCTCTTGGAACTATGACAACTA 58.093 34.615 0.00 0.00 36.70 2.24
350 351 6.773638 ACATTCTCTTGGAACTATGACAACT 58.226 36.000 0.00 0.00 36.70 3.16
351 352 7.440523 AACATTCTCTTGGAACTATGACAAC 57.559 36.000 0.00 0.00 36.70 3.32
352 353 9.567776 TTTAACATTCTCTTGGAACTATGACAA 57.432 29.630 0.00 0.00 36.70 3.18
353 354 9.739276 ATTTAACATTCTCTTGGAACTATGACA 57.261 29.630 0.00 0.00 36.70 3.58
397 398 9.224267 TGAAAATGTGAACAGATTTTTGGAAAA 57.776 25.926 18.61 4.50 42.13 2.29
398 399 8.783833 TGAAAATGTGAACAGATTTTTGGAAA 57.216 26.923 18.61 5.72 42.13 3.13
399 400 8.783833 TTGAAAATGTGAACAGATTTTTGGAA 57.216 26.923 18.61 11.83 42.13 3.53
400 401 8.783833 TTTGAAAATGTGAACAGATTTTTGGA 57.216 26.923 18.61 9.12 42.13 3.53
401 402 9.493206 CTTTTGAAAATGTGAACAGATTTTTGG 57.507 29.630 18.61 8.21 42.13 3.28
405 406 9.218440 ACAACTTTTGAAAATGTGAACAGATTT 57.782 25.926 4.48 4.48 36.06 2.17
406 407 8.776376 ACAACTTTTGAAAATGTGAACAGATT 57.224 26.923 7.46 0.00 0.00 2.40
407 408 8.776376 AACAACTTTTGAAAATGTGAACAGAT 57.224 26.923 7.46 0.00 0.00 2.90
408 409 8.494347 CAAACAACTTTTGAAAATGTGAACAGA 58.506 29.630 7.46 0.00 0.00 3.41
409 410 8.281893 ACAAACAACTTTTGAAAATGTGAACAG 58.718 29.630 3.81 0.00 33.83 3.16
410 411 8.147642 ACAAACAACTTTTGAAAATGTGAACA 57.852 26.923 3.81 0.00 33.83 3.18
411 412 9.444534 AAACAAACAACTTTTGAAAATGTGAAC 57.555 25.926 3.81 0.00 33.83 3.18
425 426 8.611757 GCCTATGAATTCAAAAACAAACAACTT 58.388 29.630 13.09 0.00 0.00 2.66
426 427 7.986889 AGCCTATGAATTCAAAAACAAACAACT 59.013 29.630 13.09 0.00 0.00 3.16
427 428 8.141835 AGCCTATGAATTCAAAAACAAACAAC 57.858 30.769 13.09 0.00 0.00 3.32
428 429 8.729805 AAGCCTATGAATTCAAAAACAAACAA 57.270 26.923 13.09 0.00 0.00 2.83
429 430 8.729805 AAAGCCTATGAATTCAAAAACAAACA 57.270 26.923 13.09 0.00 0.00 2.83
432 433 9.388506 TGAAAAAGCCTATGAATTCAAAAACAA 57.611 25.926 13.09 0.00 0.00 2.83
433 434 8.954950 TGAAAAAGCCTATGAATTCAAAAACA 57.045 26.923 13.09 0.28 0.00 2.83
436 437 9.612066 ACTTTGAAAAAGCCTATGAATTCAAAA 57.388 25.926 13.09 2.94 42.64 2.44
437 438 9.612066 AACTTTGAAAAAGCCTATGAATTCAAA 57.388 25.926 13.09 10.08 41.68 2.69
438 439 9.260002 GAACTTTGAAAAAGCCTATGAATTCAA 57.740 29.630 13.09 1.39 35.63 2.69
439 440 8.420222 TGAACTTTGAAAAAGCCTATGAATTCA 58.580 29.630 11.26 11.26 0.00 2.57
440 441 8.703336 GTGAACTTTGAAAAAGCCTATGAATTC 58.297 33.333 0.00 0.00 0.00 2.17
441 442 7.382218 CGTGAACTTTGAAAAAGCCTATGAATT 59.618 33.333 0.00 0.00 0.00 2.17
442 443 6.863126 CGTGAACTTTGAAAAAGCCTATGAAT 59.137 34.615 0.00 0.00 0.00 2.57
443 444 6.038825 TCGTGAACTTTGAAAAAGCCTATGAA 59.961 34.615 0.00 0.00 0.00 2.57
444 445 5.529430 TCGTGAACTTTGAAAAAGCCTATGA 59.471 36.000 0.00 0.00 0.00 2.15
445 446 5.757886 TCGTGAACTTTGAAAAAGCCTATG 58.242 37.500 0.00 0.00 0.00 2.23
446 447 6.183360 TGTTCGTGAACTTTGAAAAAGCCTAT 60.183 34.615 13.40 0.00 41.67 2.57
447 448 5.124138 TGTTCGTGAACTTTGAAAAAGCCTA 59.876 36.000 13.40 0.00 41.67 3.93
448 449 4.082463 TGTTCGTGAACTTTGAAAAAGCCT 60.082 37.500 13.40 0.00 41.67 4.58
449 450 4.170256 TGTTCGTGAACTTTGAAAAAGCC 58.830 39.130 13.40 0.00 41.67 4.35
450 451 5.949233 ATGTTCGTGAACTTTGAAAAAGC 57.051 34.783 13.40 0.00 41.67 3.51
523 524 4.496673 CCCAAAGTTCACGAAATCACGAAA 60.497 41.667 0.00 0.00 37.03 3.46
526 527 2.350388 CCCCAAAGTTCACGAAATCACG 60.350 50.000 0.00 0.00 39.31 4.35
535 536 5.993748 TCATATTTTCCCCCAAAGTTCAC 57.006 39.130 0.00 0.00 0.00 3.18
593 596 4.134563 ACACTAACAAAAAGGTCTGCGAT 58.865 39.130 0.00 0.00 0.00 4.58
598 601 6.320418 CCCAAAGTACACTAACAAAAAGGTCT 59.680 38.462 0.00 0.00 0.00 3.85
602 605 6.702716 TCCCCAAAGTACACTAACAAAAAG 57.297 37.500 0.00 0.00 0.00 2.27
608 611 5.010213 TGCAAATTCCCCAAAGTACACTAAC 59.990 40.000 0.00 0.00 0.00 2.34
617 623 6.638096 AAAAATCTTGCAAATTCCCCAAAG 57.362 33.333 0.00 0.00 0.00 2.77
640 646 7.854337 AGTATTATGGAACGAAGGGAGTAAAA 58.146 34.615 0.00 0.00 0.00 1.52
669 675 9.748100 AAAAATGTTAAGTTGTAAAAAGTTGCG 57.252 25.926 0.00 0.00 0.00 4.85
735 747 3.037549 TGTGAGCCCATTTGAGGTTTTT 58.962 40.909 0.00 0.00 0.00 1.94
736 748 2.365293 GTGTGAGCCCATTTGAGGTTTT 59.635 45.455 0.00 0.00 0.00 2.43
740 752 0.251297 TGGTGTGAGCCCATTTGAGG 60.251 55.000 0.00 0.00 0.00 3.86
778 797 3.342627 CGAGCCGTGTTTTGCCGA 61.343 61.111 0.00 0.00 0.00 5.54
808 839 2.815647 GGGAGAACGGCAGCGAAG 60.816 66.667 0.00 0.00 0.00 3.79
1027 1059 1.068741 GGCTACTTACATGGAGGACGG 59.931 57.143 0.00 0.00 0.00 4.79
1045 1077 2.566724 TGATTTGATTTGAGGTTGGGGC 59.433 45.455 0.00 0.00 0.00 5.80
1046 1078 4.824289 CTTGATTTGATTTGAGGTTGGGG 58.176 43.478 0.00 0.00 0.00 4.96
1047 1079 4.020839 AGCTTGATTTGATTTGAGGTTGGG 60.021 41.667 0.00 0.00 0.00 4.12
1048 1080 5.143376 AGCTTGATTTGATTTGAGGTTGG 57.857 39.130 0.00 0.00 0.00 3.77
1049 1081 5.166398 GGAGCTTGATTTGATTTGAGGTTG 58.834 41.667 0.00 0.00 0.00 3.77
1050 1082 4.221482 GGGAGCTTGATTTGATTTGAGGTT 59.779 41.667 0.00 0.00 0.00 3.50
1051 1083 3.766051 GGGAGCTTGATTTGATTTGAGGT 59.234 43.478 0.00 0.00 0.00 3.85
1063 1099 1.578215 AGGTAGAGAGGGGAGCTTGAT 59.422 52.381 0.00 0.00 0.00 2.57
1101 1137 2.821307 GCATCTGCGAAGAAAAGGAG 57.179 50.000 0.00 0.00 0.00 3.69
1251 1295 3.083349 CCCCACGATCCTGCCTGA 61.083 66.667 0.00 0.00 0.00 3.86
1277 1321 9.780186 ATCTTTACACTTAAGTTTGCTTAGAGT 57.220 29.630 5.07 0.04 38.31 3.24
1279 1323 9.772973 TCATCTTTACACTTAAGTTTGCTTAGA 57.227 29.630 5.07 5.08 38.31 2.10
1283 1327 7.173390 GGACTCATCTTTACACTTAAGTTTGCT 59.827 37.037 5.07 0.00 0.00 3.91
1333 1377 1.103398 AGCATATTGCCGGCTTGACC 61.103 55.000 29.70 11.53 46.52 4.02
1345 1389 7.566569 CCATTCCTGATCTATCTCAGCATATT 58.433 38.462 0.00 0.00 41.12 1.28
1349 1393 3.007723 GCCATTCCTGATCTATCTCAGCA 59.992 47.826 0.00 0.00 41.12 4.41
1355 1399 4.042684 AGAAAGGGCCATTCCTGATCTATC 59.957 45.833 17.34 0.00 37.20 2.08
1371 1415 1.351076 ATGGGCCAACAAAGAAAGGG 58.649 50.000 11.89 0.00 0.00 3.95
1426 1475 5.008217 CCGTTTCCACATTCAGTTTGTCTAA 59.992 40.000 0.00 0.00 0.00 2.10
1427 1476 4.513692 CCGTTTCCACATTCAGTTTGTCTA 59.486 41.667 0.00 0.00 0.00 2.59
1428 1477 3.315191 CCGTTTCCACATTCAGTTTGTCT 59.685 43.478 0.00 0.00 0.00 3.41
1429 1478 3.628017 CCGTTTCCACATTCAGTTTGTC 58.372 45.455 0.00 0.00 0.00 3.18
1430 1479 2.223711 GCCGTTTCCACATTCAGTTTGT 60.224 45.455 0.00 0.00 0.00 2.83
1431 1480 2.223688 TGCCGTTTCCACATTCAGTTTG 60.224 45.455 0.00 0.00 0.00 2.93
1432 1481 2.028130 TGCCGTTTCCACATTCAGTTT 58.972 42.857 0.00 0.00 0.00 2.66
1433 1482 1.336755 GTGCCGTTTCCACATTCAGTT 59.663 47.619 0.00 0.00 33.50 3.16
1434 1483 0.951558 GTGCCGTTTCCACATTCAGT 59.048 50.000 0.00 0.00 33.50 3.41
1435 1484 0.240945 GGTGCCGTTTCCACATTCAG 59.759 55.000 0.00 0.00 34.94 3.02
1436 1485 0.466372 TGGTGCCGTTTCCACATTCA 60.466 50.000 0.00 0.00 34.94 2.57
1437 1486 2.336341 TGGTGCCGTTTCCACATTC 58.664 52.632 0.00 0.00 34.94 2.67
1438 1487 4.589046 TGGTGCCGTTTCCACATT 57.411 50.000 0.00 0.00 34.94 2.71
1442 1491 1.883275 CTATTTGTGGTGCCGTTTCCA 59.117 47.619 0.00 0.00 0.00 3.53
1443 1492 1.402325 GCTATTTGTGGTGCCGTTTCC 60.402 52.381 0.00 0.00 0.00 3.13
1444 1493 1.539827 AGCTATTTGTGGTGCCGTTTC 59.460 47.619 0.00 0.00 0.00 2.78
1445 1494 1.616159 AGCTATTTGTGGTGCCGTTT 58.384 45.000 0.00 0.00 0.00 3.60
1449 1498 3.756434 TGTTAGAAGCTATTTGTGGTGCC 59.244 43.478 0.00 0.00 0.00 5.01
1469 1518 6.147821 GTGAAGTATCGGCAATATAGCATTGT 59.852 38.462 0.00 0.00 35.83 2.71
1477 1526 5.930135 AGGAAAGTGAAGTATCGGCAATAT 58.070 37.500 0.00 0.00 0.00 1.28
1478 1527 5.128827 AGAGGAAAGTGAAGTATCGGCAATA 59.871 40.000 0.00 0.00 0.00 1.90
1492 1541 6.974965 AGCATTAACAAGAAAGAGGAAAGTG 58.025 36.000 0.00 0.00 0.00 3.16
1530 1579 9.672086 CGTCTTCCAAACATTAACAAGAATTTA 57.328 29.630 0.00 0.00 0.00 1.40
1532 1581 6.640907 GCGTCTTCCAAACATTAACAAGAATT 59.359 34.615 0.00 0.00 0.00 2.17
1604 1654 3.121611 CCACAAAATGTGCAAATAGCGTG 59.878 43.478 4.98 0.00 46.51 5.34
1606 1656 2.667481 CCCACAAAATGTGCAAATAGCG 59.333 45.455 4.98 0.00 46.51 4.26
1620 1670 1.404843 GGTGCCACTTTACCCACAAA 58.595 50.000 0.00 0.00 0.00 2.83
1637 1687 6.673154 AATTTTTAAGCGCTAATCTACGGT 57.327 33.333 12.05 0.00 42.60 4.83
1642 1692 9.289782 AGGATGATAATTTTTAAGCGCTAATCT 57.710 29.630 12.05 0.00 0.00 2.40
1667 1729 0.983378 AGTGGCCCCCTAGCAAGTAG 60.983 60.000 0.00 0.00 0.00 2.57
1679 1741 1.279271 AGACAGTACAATCAGTGGCCC 59.721 52.381 0.00 0.00 0.00 5.80
1765 1827 2.746904 CACATGACGAACAATGGCCTAA 59.253 45.455 3.32 0.00 0.00 2.69
1798 1873 7.936496 TTATGCTTCATGAACAGGTCAATAA 57.064 32.000 3.38 1.00 40.50 1.40
1853 1928 8.743085 AACATCATTAGATCATTAGTGCTTGT 57.257 30.769 0.00 0.00 30.20 3.16
1873 1955 3.307674 TGTTCGCTGCAATCAAAACATC 58.692 40.909 0.00 0.00 0.00 3.06
2046 2128 5.634859 GCTCTGGAAATGGTGTATTTGTTTG 59.365 40.000 0.00 0.00 39.06 2.93
2050 2132 5.393461 GGAAGCTCTGGAAATGGTGTATTTG 60.393 44.000 0.00 0.00 39.06 2.32
2051 2133 4.706962 GGAAGCTCTGGAAATGGTGTATTT 59.293 41.667 0.00 0.00 41.59 1.40
2052 2134 4.273318 GGAAGCTCTGGAAATGGTGTATT 58.727 43.478 0.00 0.00 0.00 1.89
2053 2135 3.372025 GGGAAGCTCTGGAAATGGTGTAT 60.372 47.826 0.00 0.00 0.00 2.29
2054 2136 2.026262 GGGAAGCTCTGGAAATGGTGTA 60.026 50.000 0.00 0.00 0.00 2.90
2055 2137 1.272147 GGGAAGCTCTGGAAATGGTGT 60.272 52.381 0.00 0.00 0.00 4.16
2056 2138 1.272092 TGGGAAGCTCTGGAAATGGTG 60.272 52.381 0.00 0.00 0.00 4.17
2057 2139 1.075601 TGGGAAGCTCTGGAAATGGT 58.924 50.000 0.00 0.00 0.00 3.55
2058 2140 1.467920 GTGGGAAGCTCTGGAAATGG 58.532 55.000 0.00 0.00 0.00 3.16
2059 2141 1.005215 AGGTGGGAAGCTCTGGAAATG 59.995 52.381 0.00 0.00 0.00 2.32
2089 2171 5.221087 CCACACGTGTTTAATGGTTTAACCT 60.221 40.000 20.79 0.00 39.58 3.50
2116 2198 1.541233 CCAGCCGAGATAATGTGGGAC 60.541 57.143 0.00 0.00 0.00 4.46
2129 2211 2.422803 CCCATTCTTTTATCCCAGCCGA 60.423 50.000 0.00 0.00 0.00 5.54
2130 2212 1.956477 CCCATTCTTTTATCCCAGCCG 59.044 52.381 0.00 0.00 0.00 5.52
2147 2237 7.844779 AGATGTTACTATTACTTTCTCCTCCCA 59.155 37.037 0.00 0.00 0.00 4.37
2163 2253 7.124573 ACATGTGCATTCCTAGATGTTACTA 57.875 36.000 0.00 0.00 0.00 1.82
2167 2257 7.557358 TGATTAACATGTGCATTCCTAGATGTT 59.443 33.333 0.00 0.00 37.66 2.71
2206 2296 1.564348 GATTGGGTCCCACTACACCAT 59.436 52.381 11.24 0.00 33.91 3.55
2209 2299 2.026262 ACATGATTGGGTCCCACTACAC 60.026 50.000 11.24 1.15 30.78 2.90
2211 2301 3.016736 CAACATGATTGGGTCCCACTAC 58.983 50.000 11.24 5.66 30.78 2.73
2259 2349 4.630644 TGCTCTGAAGAAATGAAGACCT 57.369 40.909 0.00 0.00 0.00 3.85
2261 2351 6.551385 TTCTTGCTCTGAAGAAATGAAGAC 57.449 37.500 0.00 0.00 38.69 3.01
2267 2357 3.757493 CCTGCTTCTTGCTCTGAAGAAAT 59.243 43.478 14.73 0.00 40.59 2.17
2273 2363 0.036577 GCTCCTGCTTCTTGCTCTGA 60.037 55.000 0.00 0.00 43.37 3.27
2330 2420 3.126831 GCTGGTTGAGTCCATTCTATCG 58.873 50.000 0.00 0.00 36.84 2.92
2335 2425 2.911484 CTAGGCTGGTTGAGTCCATTC 58.089 52.381 0.00 0.00 36.84 2.67
2337 2427 0.543749 GCTAGGCTGGTTGAGTCCAT 59.456 55.000 0.00 0.00 36.84 3.41
2373 2463 1.202020 CGTTTGCCGTGATGTGTATGG 60.202 52.381 0.00 0.00 0.00 2.74
2376 2466 0.880718 TGCGTTTGCCGTGATGTGTA 60.881 50.000 0.00 0.00 41.78 2.90
2386 2476 3.127352 TTCGGGTGTTGCGTTTGCC 62.127 57.895 0.00 0.00 41.78 4.52
2401 2491 1.269517 CCATTGGTTTGTGGGTGTTCG 60.270 52.381 0.00 0.00 0.00 3.95
2431 2521 0.034337 GGTGTGTTCTTCTGGCCGTA 59.966 55.000 0.00 0.00 0.00 4.02
2444 2534 2.771089 CAGAGTTGCAGTATGGTGTGT 58.229 47.619 0.00 0.00 35.86 3.72
2492 2582 0.181350 CTCAACAGGGGCATAGGGTC 59.819 60.000 0.00 0.00 0.00 4.46
2517 2607 0.326264 GGGCAGTCACACTGGATCTT 59.674 55.000 5.82 0.00 46.01 2.40
2545 2635 2.668632 GGTGGAATCCCGTGCTCA 59.331 61.111 0.00 0.00 34.29 4.26
2592 2682 7.385478 AGAGTTTCTTTCCTCGACACTTTATTC 59.615 37.037 0.00 0.00 32.88 1.75
2670 2760 8.063153 TGAGACTCCCCTGTTAAGTGTATAATA 58.937 37.037 0.00 0.00 0.00 0.98
2673 2763 5.834460 TGAGACTCCCCTGTTAAGTGTATA 58.166 41.667 0.00 0.00 0.00 1.47
2675 2765 4.122337 TGAGACTCCCCTGTTAAGTGTA 57.878 45.455 0.00 0.00 0.00 2.90
2676 2766 2.972348 TGAGACTCCCCTGTTAAGTGT 58.028 47.619 0.00 0.00 0.00 3.55
2677 2767 4.351874 TTTGAGACTCCCCTGTTAAGTG 57.648 45.455 0.00 0.00 0.00 3.16
2678 2768 5.584551 ATTTTGAGACTCCCCTGTTAAGT 57.415 39.130 0.00 0.00 0.00 2.24
2679 2769 9.853177 ATAATATTTTGAGACTCCCCTGTTAAG 57.147 33.333 0.00 0.00 0.00 1.85
2686 2853 9.274206 GTTCAGTATAATATTTTGAGACTCCCC 57.726 37.037 0.00 0.00 0.00 4.81
2880 3049 3.743521 TCTTCTTCAAGTGGTGTGGATG 58.256 45.455 0.00 0.00 0.00 3.51
2888 3057 5.689068 GCACAATTTCTTCTTCTTCAAGTGG 59.311 40.000 0.00 0.00 0.00 4.00
2911 3080 1.488393 AGGAGCACTAATTCCTCAGGC 59.512 52.381 0.00 0.00 39.65 4.85
3056 3225 3.769739 AATCACTAACACTGCAGGACA 57.230 42.857 19.93 0.00 0.00 4.02
3380 3551 1.472480 GTTGCTCGTGCCATACCAATT 59.528 47.619 7.05 0.00 38.71 2.32
3392 3563 1.070758 ACATGGTCTGAAGTTGCTCGT 59.929 47.619 0.00 0.00 0.00 4.18
3395 3566 2.645838 ACACATGGTCTGAAGTTGCT 57.354 45.000 0.00 0.00 0.00 3.91
3412 3583 4.320861 CGTCCCAAATTGTAGCATTGAACA 60.321 41.667 0.00 0.00 0.00 3.18
3428 3599 0.245539 GATCGACAAGGACGTCCCAA 59.754 55.000 30.82 10.51 37.41 4.12
3468 3639 4.943705 AGACACAAAGCAGAAAAGTCTTCA 59.056 37.500 0.00 0.00 31.38 3.02
3548 3719 2.507471 AGACCTTGACCCTGGAATGATC 59.493 50.000 0.00 0.00 0.00 2.92
3666 3837 1.225983 CCTGTGTGTTGTGTGGGGA 59.774 57.895 0.00 0.00 0.00 4.81
3708 3879 6.478512 TTAAACAGGACCTGCAAATCTTTT 57.521 33.333 21.95 14.08 34.37 2.27
3709 3880 6.295292 GGATTAAACAGGACCTGCAAATCTTT 60.295 38.462 26.92 19.58 34.37 2.52
3751 3922 8.505246 TGTATACCCAGGAATACAGTTCTAGTA 58.495 37.037 9.48 0.00 34.47 1.82
3752 3923 7.287235 GTGTATACCCAGGAATACAGTTCTAGT 59.713 40.741 12.59 0.00 38.81 2.57
3753 3924 7.287005 TGTGTATACCCAGGAATACAGTTCTAG 59.713 40.741 12.59 0.00 38.81 2.43
3826 3997 4.437682 TGAACAGAACATCCACTTTCCT 57.562 40.909 0.00 0.00 0.00 3.36
3942 4113 2.171659 TGTAGAAGTCCACCACTGCAAA 59.828 45.455 0.00 0.00 34.56 3.68
3983 4154 2.534011 TTGATGCCCTGGGGGTCA 60.534 61.111 16.03 4.23 46.51 4.02
4057 4231 2.388232 GCGTCGGTCTTGCGGAAAT 61.388 57.895 0.00 0.00 0.00 2.17
4116 4290 0.251787 TACACAGCTCAGCTCCTGGA 60.252 55.000 0.00 0.00 36.40 3.86
4171 4352 2.758327 AGCCGGTCGCACCAGATA 60.758 61.111 1.90 0.00 38.47 1.98
4192 4373 0.401395 AACAGGACTTGGGACTGGGA 60.401 55.000 0.00 0.00 36.57 4.37
4193 4374 0.250901 CAACAGGACTTGGGACTGGG 60.251 60.000 0.00 0.00 36.57 4.45
4194 4375 0.250901 CCAACAGGACTTGGGACTGG 60.251 60.000 0.00 0.00 37.62 4.00
4195 4376 0.474184 ACCAACAGGACTTGGGACTG 59.526 55.000 3.12 0.00 44.58 3.51
4196 4377 0.765510 GACCAACAGGACTTGGGACT 59.234 55.000 3.12 0.00 44.58 3.85
4254 4436 0.528470 GCTGTCTCCTTCGCAGTACT 59.472 55.000 0.00 0.00 33.18 2.73
4271 4453 4.748102 CGTATAATAATGTTCGGTGTGGCT 59.252 41.667 0.00 0.00 0.00 4.75
4294 4476 7.450787 AGAACAATTTCTCGACTTCCACAGTC 61.451 42.308 0.00 0.00 40.59 3.51
4295 4477 4.073293 ACAATTTCTCGACTTCCACAGT 57.927 40.909 0.00 0.00 39.07 3.55
4296 4478 4.752101 AGAACAATTTCTCGACTTCCACAG 59.248 41.667 0.00 0.00 37.55 3.66
4297 4479 4.703897 AGAACAATTTCTCGACTTCCACA 58.296 39.130 0.00 0.00 37.55 4.17
4307 4489 7.869429 ACATGTTGATTGGAAGAACAATTTCTC 59.131 33.333 0.00 0.00 41.56 2.87
4316 4498 4.081406 CCTGGACATGTTGATTGGAAGAA 58.919 43.478 0.00 0.00 0.00 2.52
4411 4597 1.525784 CGCTGCTCGAAAAATCTCACG 60.526 52.381 0.00 0.00 41.67 4.35
4464 4662 0.750546 CAGTGGATGGTGATGGCCAG 60.751 60.000 13.05 0.00 42.47 4.85
4474 4672 0.907486 TCTCCAGCTTCAGTGGATGG 59.093 55.000 0.00 0.00 43.33 3.51
4512 4710 1.431036 GCCAGCGAGATGAAAAGCC 59.569 57.895 0.00 0.00 0.00 4.35
4642 4846 1.356124 AGAGGACAGCCACAAGATGT 58.644 50.000 0.00 0.00 36.29 3.06
4643 4847 2.354259 GAAGAGGACAGCCACAAGATG 58.646 52.381 0.00 0.00 36.29 2.90
4655 4859 2.939103 CAACGGATGAATGGAAGAGGAC 59.061 50.000 0.00 0.00 0.00 3.85
4659 4863 6.537301 GTGTAATACAACGGATGAATGGAAGA 59.463 38.462 0.00 0.00 0.00 2.87
4660 4864 6.509517 CGTGTAATACAACGGATGAATGGAAG 60.510 42.308 0.00 0.00 0.00 3.46
4664 4868 5.712217 ACGTGTAATACAACGGATGAATG 57.288 39.130 15.61 0.00 30.74 2.67
4665 4869 6.567050 AGTACGTGTAATACAACGGATGAAT 58.433 36.000 15.61 1.98 30.74 2.57
4666 4870 5.953183 AGTACGTGTAATACAACGGATGAA 58.047 37.500 15.61 0.00 30.74 2.57
4667 4871 5.565592 AGTACGTGTAATACAACGGATGA 57.434 39.130 15.61 1.52 30.74 2.92
4668 4872 4.435554 CGAGTACGTGTAATACAACGGATG 59.564 45.833 15.61 0.00 34.56 3.51
4669 4873 4.591202 CGAGTACGTGTAATACAACGGAT 58.409 43.478 15.61 5.32 34.56 4.18
4670 4874 3.727673 GCGAGTACGTGTAATACAACGGA 60.728 47.826 15.61 7.83 41.98 4.69
4672 4876 3.162831 TGCGAGTACGTGTAATACAACG 58.837 45.455 0.00 11.66 41.98 4.10
4674 4878 4.683501 TCTGCGAGTACGTGTAATACAA 57.316 40.909 0.00 0.00 41.98 2.41
4675 4879 4.551410 CGATCTGCGAGTACGTGTAATACA 60.551 45.833 0.00 0.00 44.57 2.29
4677 4881 3.059393 CCGATCTGCGAGTACGTGTAATA 60.059 47.826 0.00 0.00 44.57 0.98
4678 4882 2.286831 CCGATCTGCGAGTACGTGTAAT 60.287 50.000 0.00 0.00 44.57 1.89
4679 4883 1.063027 CCGATCTGCGAGTACGTGTAA 59.937 52.381 0.00 0.00 44.57 2.41
4681 4885 1.303799 ACCGATCTGCGAGTACGTGT 61.304 55.000 0.00 0.00 44.57 4.49
4683 4887 0.098376 GAACCGATCTGCGAGTACGT 59.902 55.000 0.00 0.00 44.57 3.57
4685 4889 0.454600 TGGAACCGATCTGCGAGTAC 59.545 55.000 0.00 0.00 44.57 2.73
4686 4890 0.738975 CTGGAACCGATCTGCGAGTA 59.261 55.000 0.00 0.00 44.57 2.59
4687 4891 0.965866 TCTGGAACCGATCTGCGAGT 60.966 55.000 0.00 0.00 44.57 4.18
4688 4892 0.173481 TTCTGGAACCGATCTGCGAG 59.827 55.000 0.00 0.00 44.57 5.03
4689 4893 0.173481 CTTCTGGAACCGATCTGCGA 59.827 55.000 0.00 0.00 44.57 5.10
4694 4914 0.108329 TTCGCCTTCTGGAACCGATC 60.108 55.000 0.00 0.00 34.57 3.69
4696 4916 1.136305 CTATTCGCCTTCTGGAACCGA 59.864 52.381 0.00 0.00 34.57 4.69
4699 4919 1.666189 GCACTATTCGCCTTCTGGAAC 59.334 52.381 0.00 0.00 34.57 3.62
4708 4928 2.225068 TAGCTTCAGCACTATTCGCC 57.775 50.000 0.75 0.00 45.16 5.54
4719 4939 0.537188 ACCACGGACCATAGCTTCAG 59.463 55.000 0.00 0.00 0.00 3.02
4722 4942 0.690762 ACAACCACGGACCATAGCTT 59.309 50.000 0.00 0.00 0.00 3.74
4725 4945 2.007049 GCAGACAACCACGGACCATAG 61.007 57.143 0.00 0.00 0.00 2.23
4730 4955 3.330275 GTGCAGACAACCACGGAC 58.670 61.111 0.00 0.00 0.00 4.79
4781 5019 2.487762 TGCATAGAAAAACAAGCTCCCG 59.512 45.455 0.00 0.00 0.00 5.14
4809 5050 2.975851 GACAACGTACGTACTTGACTGG 59.024 50.000 28.68 15.24 0.00 4.00
4836 5077 2.605299 GCCATGGCAGGATTCCCT 59.395 61.111 32.08 0.00 45.74 4.20
4916 5163 4.587189 CGCCCGGTCGATCTTCCC 62.587 72.222 0.00 0.00 0.00 3.97
4932 5179 2.394545 TACCTATCACGATTCACGCG 57.605 50.000 3.53 3.53 46.94 6.01
4951 5199 0.251033 GGTCGGGGTTTGTTAGGCTT 60.251 55.000 0.00 0.00 0.00 4.35
4957 5205 0.251165 CTGGATGGTCGGGGTTTGTT 60.251 55.000 0.00 0.00 0.00 2.83



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.