Multiple sequence alignment - TraesCS1B01G312700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1B01G312700 | chr1B | 100.000 | 5029 | 0 | 0 | 1 | 5029 | 536600922 | 536605950 | 0 | 9287 |
1 | TraesCS1B01G312700 | chr1D | 93.019 | 2378 | 100 | 30 | 2681 | 5029 | 399822454 | 399824794 | 0 | 3411 |
2 | TraesCS1B01G312700 | chr1D | 87.978 | 2171 | 155 | 50 | 496 | 2626 | 399820219 | 399822323 | 0 | 2466 |
3 | TraesCS1B01G312700 | chr1A | 90.771 | 2167 | 141 | 31 | 1535 | 3657 | 496294111 | 496296262 | 0 | 2839 |
4 | TraesCS1B01G312700 | chr1A | 85.308 | 1266 | 95 | 42 | 3821 | 5029 | 496296376 | 496297607 | 0 | 1223 |
5 | TraesCS1B01G312700 | chr1A | 90.166 | 661 | 36 | 13 | 779 | 1423 | 496293406 | 496294053 | 0 | 833 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1B01G312700 | chr1B | 536600922 | 536605950 | 5028 | False | 9287.000000 | 9287 | 100.000000 | 1 | 5029 | 1 | chr1B.!!$F1 | 5028 |
1 | TraesCS1B01G312700 | chr1D | 399820219 | 399824794 | 4575 | False | 2938.500000 | 3411 | 90.498500 | 496 | 5029 | 2 | chr1D.!!$F1 | 4533 |
2 | TraesCS1B01G312700 | chr1A | 496293406 | 496297607 | 4201 | False | 1631.666667 | 2839 | 88.748333 | 779 | 5029 | 3 | chr1A.!!$F1 | 4250 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
55 | 56 | 0.031616 | TGGAAGCTTTTGGGTTGGGT | 60.032 | 50.0 | 0.00 | 0.00 | 35.61 | 4.51 | F |
1349 | 1393 | 0.466189 | CTGGGTCAAGCCGGCAATAT | 60.466 | 55.0 | 31.54 | 8.92 | 38.44 | 1.28 | F |
1563 | 1613 | 0.034198 | TGTTTGGAAGACGCCATCGA | 59.966 | 50.0 | 0.00 | 0.00 | 37.86 | 3.59 | F |
1642 | 1692 | 0.035176 | GTGGGTAAAGTGGCACCGTA | 59.965 | 55.0 | 15.27 | 3.73 | 35.53 | 4.02 | F |
2358 | 2448 | 0.543749 | GGACTCAACCAGCCTAGCAT | 59.456 | 55.0 | 0.00 | 0.00 | 0.00 | 3.79 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1435 | 1484 | 0.240945 | GGTGCCGTTTCCACATTCAG | 59.759 | 55.0 | 0.00 | 0.00 | 34.94 | 3.02 | R |
2431 | 2521 | 0.034337 | GGTGTGTTCTTCTGGCCGTA | 59.966 | 55.0 | 0.00 | 0.00 | 0.00 | 4.02 | R |
2492 | 2582 | 0.181350 | CTCAACAGGGGCATAGGGTC | 59.819 | 60.0 | 0.00 | 0.00 | 0.00 | 4.46 | R |
3428 | 3599 | 0.245539 | GATCGACAAGGACGTCCCAA | 59.754 | 55.0 | 30.82 | 10.51 | 37.41 | 4.12 | R |
4193 | 4374 | 0.250901 | CAACAGGACTTGGGACTGGG | 60.251 | 60.0 | 0.00 | 0.00 | 36.57 | 4.45 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
29 | 30 | 1.688735 | AGGTTTCAAAAGCTTCCCTGC | 59.311 | 47.619 | 0.00 | 0.00 | 43.61 | 4.85 |
30 | 31 | 1.270305 | GGTTTCAAAAGCTTCCCTGCC | 60.270 | 52.381 | 0.00 | 0.00 | 33.81 | 4.85 |
31 | 32 | 0.673437 | TTTCAAAAGCTTCCCTGCCG | 59.327 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
32 | 33 | 1.178534 | TTCAAAAGCTTCCCTGCCGG | 61.179 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
33 | 34 | 1.903404 | CAAAAGCTTCCCTGCCGGT | 60.903 | 57.895 | 1.90 | 0.00 | 0.00 | 5.28 |
34 | 35 | 1.152546 | AAAAGCTTCCCTGCCGGTT | 60.153 | 52.632 | 1.90 | 0.00 | 0.00 | 4.44 |
35 | 36 | 0.759060 | AAAAGCTTCCCTGCCGGTTT | 60.759 | 50.000 | 1.90 | 0.00 | 0.00 | 3.27 |
36 | 37 | 0.759060 | AAAGCTTCCCTGCCGGTTTT | 60.759 | 50.000 | 1.90 | 0.00 | 0.00 | 2.43 |
37 | 38 | 1.463553 | AAGCTTCCCTGCCGGTTTTG | 61.464 | 55.000 | 1.90 | 0.00 | 0.00 | 2.44 |
38 | 39 | 2.931068 | GCTTCCCTGCCGGTTTTGG | 61.931 | 63.158 | 1.90 | 0.00 | 0.00 | 3.28 |
39 | 40 | 1.228429 | CTTCCCTGCCGGTTTTGGA | 60.228 | 57.895 | 1.90 | 1.20 | 0.00 | 3.53 |
40 | 41 | 0.825840 | CTTCCCTGCCGGTTTTGGAA | 60.826 | 55.000 | 1.90 | 9.81 | 34.15 | 3.53 |
41 | 42 | 0.825840 | TTCCCTGCCGGTTTTGGAAG | 60.826 | 55.000 | 1.90 | 0.00 | 34.01 | 3.46 |
42 | 43 | 2.650778 | CCTGCCGGTTTTGGAAGC | 59.349 | 61.111 | 1.90 | 0.00 | 32.70 | 3.86 |
43 | 44 | 1.903404 | CCTGCCGGTTTTGGAAGCT | 60.903 | 57.895 | 1.90 | 0.00 | 32.70 | 3.74 |
44 | 45 | 1.463553 | CCTGCCGGTTTTGGAAGCTT | 61.464 | 55.000 | 1.90 | 0.00 | 32.70 | 3.74 |
45 | 46 | 0.389025 | CTGCCGGTTTTGGAAGCTTT | 59.611 | 50.000 | 1.90 | 0.00 | 0.00 | 3.51 |
46 | 47 | 0.827368 | TGCCGGTTTTGGAAGCTTTT | 59.173 | 45.000 | 1.90 | 0.00 | 0.00 | 2.27 |
47 | 48 | 1.217001 | GCCGGTTTTGGAAGCTTTTG | 58.783 | 50.000 | 1.90 | 0.00 | 0.00 | 2.44 |
48 | 49 | 1.864565 | CCGGTTTTGGAAGCTTTTGG | 58.135 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
49 | 50 | 1.540146 | CCGGTTTTGGAAGCTTTTGGG | 60.540 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
50 | 51 | 1.138069 | CGGTTTTGGAAGCTTTTGGGT | 59.862 | 47.619 | 0.00 | 0.00 | 0.00 | 4.51 |
51 | 52 | 2.419436 | CGGTTTTGGAAGCTTTTGGGTT | 60.419 | 45.455 | 0.00 | 0.00 | 38.46 | 4.11 |
52 | 53 | 2.942376 | GGTTTTGGAAGCTTTTGGGTTG | 59.058 | 45.455 | 0.00 | 0.00 | 35.61 | 3.77 |
53 | 54 | 2.942376 | GTTTTGGAAGCTTTTGGGTTGG | 59.058 | 45.455 | 0.00 | 0.00 | 35.61 | 3.77 |
54 | 55 | 1.127343 | TTGGAAGCTTTTGGGTTGGG | 58.873 | 50.000 | 0.00 | 0.00 | 35.61 | 4.12 |
55 | 56 | 0.031616 | TGGAAGCTTTTGGGTTGGGT | 60.032 | 50.000 | 0.00 | 0.00 | 35.61 | 4.51 |
56 | 57 | 1.128200 | GGAAGCTTTTGGGTTGGGTT | 58.872 | 50.000 | 0.00 | 0.00 | 35.61 | 4.11 |
57 | 58 | 1.488812 | GGAAGCTTTTGGGTTGGGTTT | 59.511 | 47.619 | 0.00 | 0.00 | 35.61 | 3.27 |
58 | 59 | 2.092646 | GGAAGCTTTTGGGTTGGGTTTT | 60.093 | 45.455 | 0.00 | 0.00 | 35.61 | 2.43 |
59 | 60 | 3.134985 | GGAAGCTTTTGGGTTGGGTTTTA | 59.865 | 43.478 | 0.00 | 0.00 | 35.61 | 1.52 |
60 | 61 | 4.202419 | GGAAGCTTTTGGGTTGGGTTTTAT | 60.202 | 41.667 | 0.00 | 0.00 | 35.61 | 1.40 |
61 | 62 | 5.373222 | GAAGCTTTTGGGTTGGGTTTTATT | 58.627 | 37.500 | 0.00 | 0.00 | 35.61 | 1.40 |
62 | 63 | 5.381184 | AGCTTTTGGGTTGGGTTTTATTT | 57.619 | 34.783 | 0.00 | 0.00 | 0.00 | 1.40 |
63 | 64 | 5.761205 | AGCTTTTGGGTTGGGTTTTATTTT | 58.239 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
64 | 65 | 5.825679 | AGCTTTTGGGTTGGGTTTTATTTTC | 59.174 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
65 | 66 | 5.825679 | GCTTTTGGGTTGGGTTTTATTTTCT | 59.174 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
66 | 67 | 6.993308 | GCTTTTGGGTTGGGTTTTATTTTCTA | 59.007 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
67 | 68 | 7.663905 | GCTTTTGGGTTGGGTTTTATTTTCTAT | 59.336 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
68 | 69 | 9.567776 | CTTTTGGGTTGGGTTTTATTTTCTATT | 57.432 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
69 | 70 | 9.922477 | TTTTGGGTTGGGTTTTATTTTCTATTT | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
70 | 71 | 9.922477 | TTTGGGTTGGGTTTTATTTTCTATTTT | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 1.82 |
71 | 72 | 8.910351 | TGGGTTGGGTTTTATTTTCTATTTTG | 57.090 | 30.769 | 0.00 | 0.00 | 0.00 | 2.44 |
72 | 73 | 7.939588 | TGGGTTGGGTTTTATTTTCTATTTTGG | 59.060 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
73 | 74 | 7.392113 | GGGTTGGGTTTTATTTTCTATTTTGGG | 59.608 | 37.037 | 0.00 | 0.00 | 0.00 | 4.12 |
74 | 75 | 7.940137 | GGTTGGGTTTTATTTTCTATTTTGGGT | 59.060 | 33.333 | 0.00 | 0.00 | 0.00 | 4.51 |
75 | 76 | 9.344772 | GTTGGGTTTTATTTTCTATTTTGGGTT | 57.655 | 29.630 | 0.00 | 0.00 | 0.00 | 4.11 |
76 | 77 | 9.922477 | TTGGGTTTTATTTTCTATTTTGGGTTT | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 3.27 |
77 | 78 | 9.922477 | TGGGTTTTATTTTCTATTTTGGGTTTT | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 2.43 |
92 | 93 | 9.772973 | ATTTTGGGTTTTTCAGTTTTATACTCC | 57.227 | 29.630 | 0.00 | 0.00 | 33.85 | 3.85 |
93 | 94 | 6.904463 | TGGGTTTTTCAGTTTTATACTCCC | 57.096 | 37.500 | 0.00 | 0.00 | 35.15 | 4.30 |
94 | 95 | 6.616577 | TGGGTTTTTCAGTTTTATACTCCCT | 58.383 | 36.000 | 0.00 | 0.00 | 35.45 | 4.20 |
95 | 96 | 7.070629 | TGGGTTTTTCAGTTTTATACTCCCTT | 58.929 | 34.615 | 0.00 | 0.00 | 35.45 | 3.95 |
96 | 97 | 7.565768 | TGGGTTTTTCAGTTTTATACTCCCTTT | 59.434 | 33.333 | 0.00 | 0.00 | 35.45 | 3.11 |
97 | 98 | 7.870954 | GGGTTTTTCAGTTTTATACTCCCTTTG | 59.129 | 37.037 | 0.00 | 0.00 | 33.85 | 2.77 |
98 | 99 | 8.635328 | GGTTTTTCAGTTTTATACTCCCTTTGA | 58.365 | 33.333 | 0.00 | 0.00 | 33.85 | 2.69 |
99 | 100 | 9.459640 | GTTTTTCAGTTTTATACTCCCTTTGAC | 57.540 | 33.333 | 0.00 | 0.00 | 33.85 | 3.18 |
100 | 101 | 7.754851 | TTTCAGTTTTATACTCCCTTTGACC | 57.245 | 36.000 | 0.00 | 0.00 | 33.85 | 4.02 |
101 | 102 | 5.484715 | TCAGTTTTATACTCCCTTTGACCG | 58.515 | 41.667 | 0.00 | 0.00 | 33.85 | 4.79 |
102 | 103 | 5.012354 | TCAGTTTTATACTCCCTTTGACCGT | 59.988 | 40.000 | 0.00 | 0.00 | 33.85 | 4.83 |
103 | 104 | 5.704053 | CAGTTTTATACTCCCTTTGACCGTT | 59.296 | 40.000 | 0.00 | 0.00 | 33.85 | 4.44 |
104 | 105 | 6.875195 | CAGTTTTATACTCCCTTTGACCGTTA | 59.125 | 38.462 | 0.00 | 0.00 | 33.85 | 3.18 |
105 | 106 | 6.875726 | AGTTTTATACTCCCTTTGACCGTTAC | 59.124 | 38.462 | 0.00 | 0.00 | 28.23 | 2.50 |
106 | 107 | 6.610075 | TTTATACTCCCTTTGACCGTTACT | 57.390 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
107 | 108 | 7.716799 | TTTATACTCCCTTTGACCGTTACTA | 57.283 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
108 | 109 | 7.716799 | TTATACTCCCTTTGACCGTTACTAA | 57.283 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
109 | 110 | 6.803366 | ATACTCCCTTTGACCGTTACTAAT | 57.197 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
110 | 111 | 5.494390 | ACTCCCTTTGACCGTTACTAATT | 57.506 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
111 | 112 | 5.243207 | ACTCCCTTTGACCGTTACTAATTG | 58.757 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
112 | 113 | 5.221783 | ACTCCCTTTGACCGTTACTAATTGT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
113 | 114 | 5.240121 | TCCCTTTGACCGTTACTAATTGTC | 58.760 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
114 | 115 | 5.012354 | TCCCTTTGACCGTTACTAATTGTCT | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
115 | 116 | 5.350640 | CCCTTTGACCGTTACTAATTGTCTC | 59.649 | 44.000 | 0.00 | 0.00 | 0.00 | 3.36 |
116 | 117 | 6.164176 | CCTTTGACCGTTACTAATTGTCTCT | 58.836 | 40.000 | 0.00 | 0.00 | 0.00 | 3.10 |
117 | 118 | 6.649557 | CCTTTGACCGTTACTAATTGTCTCTT | 59.350 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
118 | 119 | 7.816031 | CCTTTGACCGTTACTAATTGTCTCTTA | 59.184 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
119 | 120 | 9.367444 | CTTTGACCGTTACTAATTGTCTCTTAT | 57.633 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
120 | 121 | 9.715121 | TTTGACCGTTACTAATTGTCTCTTATT | 57.285 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
121 | 122 | 9.715121 | TTGACCGTTACTAATTGTCTCTTATTT | 57.285 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
151 | 152 | 8.639761 | ACAGAGTTGTACTAAATTAGTGACAGT | 58.360 | 33.333 | 15.34 | 8.59 | 39.81 | 3.55 |
152 | 153 | 9.477484 | CAGAGTTGTACTAAATTAGTGACAGTT | 57.523 | 33.333 | 15.34 | 7.82 | 39.81 | 3.16 |
171 | 172 | 9.573166 | TGACAGTTAATATGGATGGATTAAAGG | 57.427 | 33.333 | 0.00 | 0.00 | 31.17 | 3.11 |
172 | 173 | 8.940397 | ACAGTTAATATGGATGGATTAAAGGG | 57.060 | 34.615 | 0.00 | 0.00 | 31.17 | 3.95 |
173 | 174 | 8.732854 | ACAGTTAATATGGATGGATTAAAGGGA | 58.267 | 33.333 | 0.00 | 0.00 | 31.17 | 4.20 |
174 | 175 | 9.586732 | CAGTTAATATGGATGGATTAAAGGGAA | 57.413 | 33.333 | 0.00 | 0.00 | 31.17 | 3.97 |
258 | 259 | 7.875306 | AAATTGTTCGAAAATTTGAAAAGCG | 57.125 | 28.000 | 20.37 | 0.00 | 36.21 | 4.68 |
259 | 260 | 4.430407 | TGTTCGAAAATTTGAAAAGCGC | 57.570 | 36.364 | 0.00 | 0.00 | 32.65 | 5.92 |
260 | 261 | 4.109050 | TGTTCGAAAATTTGAAAAGCGCT | 58.891 | 34.783 | 2.64 | 2.64 | 32.65 | 5.92 |
261 | 262 | 4.206200 | TGTTCGAAAATTTGAAAAGCGCTC | 59.794 | 37.500 | 12.06 | 0.00 | 32.65 | 5.03 |
262 | 263 | 3.958704 | TCGAAAATTTGAAAAGCGCTCA | 58.041 | 36.364 | 12.06 | 0.79 | 0.00 | 4.26 |
263 | 264 | 4.545610 | TCGAAAATTTGAAAAGCGCTCAT | 58.454 | 34.783 | 12.06 | 1.36 | 0.00 | 2.90 |
264 | 265 | 4.382457 | TCGAAAATTTGAAAAGCGCTCATG | 59.618 | 37.500 | 12.06 | 0.00 | 0.00 | 3.07 |
265 | 266 | 4.148696 | CGAAAATTTGAAAAGCGCTCATGT | 59.851 | 37.500 | 12.06 | 0.00 | 0.00 | 3.21 |
266 | 267 | 5.332506 | CGAAAATTTGAAAAGCGCTCATGTT | 60.333 | 36.000 | 12.06 | 2.35 | 0.00 | 2.71 |
267 | 268 | 5.989551 | AAATTTGAAAAGCGCTCATGTTT | 57.010 | 30.435 | 12.06 | 7.59 | 0.00 | 2.83 |
268 | 269 | 5.989551 | AATTTGAAAAGCGCTCATGTTTT | 57.010 | 30.435 | 12.06 | 7.13 | 0.00 | 2.43 |
269 | 270 | 5.580911 | ATTTGAAAAGCGCTCATGTTTTC | 57.419 | 34.783 | 19.73 | 19.73 | 39.56 | 2.29 |
270 | 271 | 3.011949 | TGAAAAGCGCTCATGTTTTCC | 57.988 | 42.857 | 22.29 | 10.00 | 38.75 | 3.13 |
271 | 272 | 2.360483 | TGAAAAGCGCTCATGTTTTCCA | 59.640 | 40.909 | 22.29 | 11.86 | 38.75 | 3.53 |
272 | 273 | 3.181482 | TGAAAAGCGCTCATGTTTTCCAA | 60.181 | 39.130 | 22.29 | 7.85 | 38.75 | 3.53 |
273 | 274 | 3.665745 | AAAGCGCTCATGTTTTCCAAT | 57.334 | 38.095 | 12.06 | 0.00 | 0.00 | 3.16 |
274 | 275 | 3.665745 | AAGCGCTCATGTTTTCCAATT | 57.334 | 38.095 | 12.06 | 0.00 | 0.00 | 2.32 |
275 | 276 | 3.665745 | AGCGCTCATGTTTTCCAATTT | 57.334 | 38.095 | 2.64 | 0.00 | 0.00 | 1.82 |
276 | 277 | 3.993920 | AGCGCTCATGTTTTCCAATTTT | 58.006 | 36.364 | 2.64 | 0.00 | 0.00 | 1.82 |
277 | 278 | 4.379652 | AGCGCTCATGTTTTCCAATTTTT | 58.620 | 34.783 | 2.64 | 0.00 | 0.00 | 1.94 |
297 | 298 | 6.866179 | TTTTTGTTCGCGCTTTTAGTAAAA | 57.134 | 29.167 | 5.56 | 7.80 | 0.00 | 1.52 |
298 | 299 | 7.452630 | TTTTTGTTCGCGCTTTTAGTAAAAT | 57.547 | 28.000 | 5.56 | 0.00 | 0.00 | 1.82 |
299 | 300 | 7.452630 | TTTTGTTCGCGCTTTTAGTAAAATT | 57.547 | 28.000 | 5.56 | 0.00 | 0.00 | 1.82 |
300 | 301 | 6.663480 | TTGTTCGCGCTTTTAGTAAAATTC | 57.337 | 33.333 | 5.56 | 3.72 | 0.00 | 2.17 |
301 | 302 | 5.992729 | TGTTCGCGCTTTTAGTAAAATTCT | 58.007 | 33.333 | 5.56 | 0.00 | 0.00 | 2.40 |
302 | 303 | 6.432107 | TGTTCGCGCTTTTAGTAAAATTCTT | 58.568 | 32.000 | 5.56 | 0.00 | 0.00 | 2.52 |
303 | 304 | 6.358558 | TGTTCGCGCTTTTAGTAAAATTCTTG | 59.641 | 34.615 | 5.56 | 0.00 | 0.00 | 3.02 |
304 | 305 | 6.230849 | TCGCGCTTTTAGTAAAATTCTTGA | 57.769 | 33.333 | 5.56 | 2.01 | 0.00 | 3.02 |
305 | 306 | 6.660722 | TCGCGCTTTTAGTAAAATTCTTGAA | 58.339 | 32.000 | 5.56 | 0.00 | 0.00 | 2.69 |
306 | 307 | 7.133513 | TCGCGCTTTTAGTAAAATTCTTGAAA | 58.866 | 30.769 | 5.56 | 0.00 | 0.00 | 2.69 |
307 | 308 | 7.806014 | TCGCGCTTTTAGTAAAATTCTTGAAAT | 59.194 | 29.630 | 5.56 | 0.00 | 0.00 | 2.17 |
308 | 309 | 8.424731 | CGCGCTTTTAGTAAAATTCTTGAAATT | 58.575 | 29.630 | 5.56 | 0.00 | 0.00 | 1.82 |
321 | 322 | 9.934190 | AAATTCTTGAAATTTCAAAAATGACCG | 57.066 | 25.926 | 25.66 | 16.03 | 45.61 | 4.79 |
322 | 323 | 6.523676 | TCTTGAAATTTCAAAAATGACCGC | 57.476 | 33.333 | 28.49 | 0.00 | 45.61 | 5.68 |
323 | 324 | 6.045318 | TCTTGAAATTTCAAAAATGACCGCA | 58.955 | 32.000 | 28.49 | 7.63 | 45.61 | 5.69 |
324 | 325 | 6.705381 | TCTTGAAATTTCAAAAATGACCGCAT | 59.295 | 30.769 | 28.49 | 0.00 | 45.61 | 4.73 |
325 | 326 | 6.857777 | TGAAATTTCAAAAATGACCGCATT | 57.142 | 29.167 | 18.45 | 0.00 | 39.16 | 3.56 |
326 | 327 | 7.256756 | TGAAATTTCAAAAATGACCGCATTT | 57.743 | 28.000 | 18.45 | 0.00 | 42.76 | 2.32 |
327 | 328 | 8.370493 | TGAAATTTCAAAAATGACCGCATTTA | 57.630 | 26.923 | 18.45 | 0.00 | 41.96 | 1.40 |
328 | 329 | 8.830580 | TGAAATTTCAAAAATGACCGCATTTAA | 58.169 | 25.926 | 18.45 | 0.00 | 41.96 | 1.52 |
340 | 341 | 8.994429 | ATGACCGCATTTAAAAATATGTTTGA | 57.006 | 26.923 | 0.78 | 0.00 | 0.00 | 2.69 |
341 | 342 | 8.818141 | TGACCGCATTTAAAAATATGTTTGAA | 57.182 | 26.923 | 0.78 | 0.00 | 0.00 | 2.69 |
342 | 343 | 9.261180 | TGACCGCATTTAAAAATATGTTTGAAA | 57.739 | 25.926 | 0.78 | 0.00 | 0.00 | 2.69 |
368 | 369 | 9.739276 | ATTTCAATAGTTGTCATAGTTCCAAGA | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
369 | 370 | 8.777865 | TTCAATAGTTGTCATAGTTCCAAGAG | 57.222 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
370 | 371 | 8.134202 | TCAATAGTTGTCATAGTTCCAAGAGA | 57.866 | 34.615 | 0.00 | 0.00 | 0.00 | 3.10 |
371 | 372 | 8.593679 | TCAATAGTTGTCATAGTTCCAAGAGAA | 58.406 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
372 | 373 | 9.388506 | CAATAGTTGTCATAGTTCCAAGAGAAT | 57.611 | 33.333 | 0.00 | 0.00 | 36.69 | 2.40 |
373 | 374 | 8.954950 | ATAGTTGTCATAGTTCCAAGAGAATG | 57.045 | 34.615 | 0.00 | 0.00 | 36.69 | 2.67 |
374 | 375 | 6.773638 | AGTTGTCATAGTTCCAAGAGAATGT | 58.226 | 36.000 | 0.00 | 0.00 | 36.69 | 2.71 |
375 | 376 | 7.227156 | AGTTGTCATAGTTCCAAGAGAATGTT | 58.773 | 34.615 | 0.00 | 0.00 | 36.69 | 2.71 |
376 | 377 | 8.375506 | AGTTGTCATAGTTCCAAGAGAATGTTA | 58.624 | 33.333 | 0.00 | 0.00 | 36.69 | 2.41 |
377 | 378 | 8.999431 | GTTGTCATAGTTCCAAGAGAATGTTAA | 58.001 | 33.333 | 0.00 | 0.00 | 36.69 | 2.01 |
378 | 379 | 9.567776 | TTGTCATAGTTCCAAGAGAATGTTAAA | 57.432 | 29.630 | 0.00 | 0.00 | 36.69 | 1.52 |
379 | 380 | 9.739276 | TGTCATAGTTCCAAGAGAATGTTAAAT | 57.261 | 29.630 | 0.00 | 0.00 | 36.69 | 1.40 |
423 | 424 | 8.783833 | TTTCCAAAAATCTGTTCACATTTTCA | 57.216 | 26.923 | 0.81 | 0.00 | 32.22 | 2.69 |
424 | 425 | 8.783833 | TTCCAAAAATCTGTTCACATTTTCAA | 57.216 | 26.923 | 0.81 | 0.00 | 32.22 | 2.69 |
425 | 426 | 8.783833 | TCCAAAAATCTGTTCACATTTTCAAA | 57.216 | 26.923 | 0.81 | 0.00 | 32.22 | 2.69 |
426 | 427 | 9.224267 | TCCAAAAATCTGTTCACATTTTCAAAA | 57.776 | 25.926 | 0.00 | 0.00 | 32.22 | 2.44 |
427 | 428 | 9.493206 | CCAAAAATCTGTTCACATTTTCAAAAG | 57.507 | 29.630 | 0.00 | 0.00 | 32.22 | 2.27 |
431 | 432 | 8.776376 | AATCTGTTCACATTTTCAAAAGTTGT | 57.224 | 26.923 | 0.00 | 0.00 | 0.00 | 3.32 |
432 | 433 | 8.776376 | ATCTGTTCACATTTTCAAAAGTTGTT | 57.224 | 26.923 | 0.00 | 0.00 | 0.00 | 2.83 |
433 | 434 | 8.600449 | TCTGTTCACATTTTCAAAAGTTGTTT | 57.400 | 26.923 | 0.00 | 0.00 | 0.00 | 2.83 |
434 | 435 | 8.494347 | TCTGTTCACATTTTCAAAAGTTGTTTG | 58.506 | 29.630 | 0.00 | 0.00 | 0.00 | 2.93 |
435 | 436 | 8.147642 | TGTTCACATTTTCAAAAGTTGTTTGT | 57.852 | 26.923 | 0.00 | 0.00 | 0.00 | 2.83 |
436 | 437 | 8.616076 | TGTTCACATTTTCAAAAGTTGTTTGTT | 58.384 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
437 | 438 | 9.444534 | GTTCACATTTTCAAAAGTTGTTTGTTT | 57.555 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
451 | 452 | 8.141835 | AGTTGTTTGTTTTTGAATTCATAGGC | 57.858 | 30.769 | 9.40 | 2.41 | 0.00 | 3.93 |
452 | 453 | 7.986889 | AGTTGTTTGTTTTTGAATTCATAGGCT | 59.013 | 29.630 | 9.40 | 0.00 | 0.00 | 4.58 |
453 | 454 | 8.611757 | GTTGTTTGTTTTTGAATTCATAGGCTT | 58.388 | 29.630 | 9.40 | 0.00 | 0.00 | 4.35 |
454 | 455 | 8.729805 | TGTTTGTTTTTGAATTCATAGGCTTT | 57.270 | 26.923 | 9.40 | 0.00 | 0.00 | 3.51 |
455 | 456 | 9.171877 | TGTTTGTTTTTGAATTCATAGGCTTTT | 57.828 | 25.926 | 9.40 | 0.00 | 0.00 | 2.27 |
458 | 459 | 8.954950 | TGTTTTTGAATTCATAGGCTTTTTCA | 57.045 | 26.923 | 9.40 | 0.00 | 0.00 | 2.69 |
459 | 460 | 9.388506 | TGTTTTTGAATTCATAGGCTTTTTCAA | 57.611 | 25.926 | 9.40 | 0.00 | 32.85 | 2.69 |
462 | 463 | 9.612066 | TTTTGAATTCATAGGCTTTTTCAAAGT | 57.388 | 25.926 | 9.40 | 0.00 | 41.40 | 2.66 |
463 | 464 | 9.612066 | TTTGAATTCATAGGCTTTTTCAAAGTT | 57.388 | 25.926 | 9.40 | 0.00 | 37.85 | 2.66 |
464 | 465 | 8.816640 | TGAATTCATAGGCTTTTTCAAAGTTC | 57.183 | 30.769 | 3.38 | 0.00 | 0.00 | 3.01 |
465 | 466 | 8.420222 | TGAATTCATAGGCTTTTTCAAAGTTCA | 58.580 | 29.630 | 3.38 | 0.00 | 0.00 | 3.18 |
466 | 467 | 8.593492 | AATTCATAGGCTTTTTCAAAGTTCAC | 57.407 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
467 | 468 | 5.757886 | TCATAGGCTTTTTCAAAGTTCACG | 58.242 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
468 | 469 | 5.529430 | TCATAGGCTTTTTCAAAGTTCACGA | 59.471 | 36.000 | 0.00 | 0.00 | 0.00 | 4.35 |
469 | 470 | 4.712122 | AGGCTTTTTCAAAGTTCACGAA | 57.288 | 36.364 | 0.00 | 0.00 | 0.00 | 3.85 |
470 | 471 | 4.421058 | AGGCTTTTTCAAAGTTCACGAAC | 58.579 | 39.130 | 1.54 | 1.54 | 41.45 | 3.95 |
471 | 472 | 4.082463 | AGGCTTTTTCAAAGTTCACGAACA | 60.082 | 37.500 | 12.21 | 0.00 | 43.47 | 3.18 |
472 | 473 | 4.803613 | GGCTTTTTCAAAGTTCACGAACAT | 59.196 | 37.500 | 12.21 | 0.00 | 43.47 | 2.71 |
473 | 474 | 5.974751 | GGCTTTTTCAAAGTTCACGAACATA | 59.025 | 36.000 | 12.21 | 0.00 | 43.47 | 2.29 |
474 | 475 | 6.640907 | GGCTTTTTCAAAGTTCACGAACATAT | 59.359 | 34.615 | 12.21 | 0.00 | 43.47 | 1.78 |
475 | 476 | 7.169140 | GGCTTTTTCAAAGTTCACGAACATATT | 59.831 | 33.333 | 12.21 | 2.07 | 43.47 | 1.28 |
476 | 477 | 8.539674 | GCTTTTTCAAAGTTCACGAACATATTT | 58.460 | 29.630 | 12.21 | 1.97 | 43.47 | 1.40 |
535 | 536 | 7.830217 | TCTTACAAACATTTTCGTGATTTCG | 57.170 | 32.000 | 0.00 | 0.00 | 0.00 | 3.46 |
544 | 545 | 6.196353 | ACATTTTCGTGATTTCGTGAACTTTG | 59.804 | 34.615 | 0.00 | 0.00 | 0.00 | 2.77 |
545 | 546 | 3.870723 | TCGTGATTTCGTGAACTTTGG | 57.129 | 42.857 | 0.00 | 0.00 | 0.00 | 3.28 |
546 | 547 | 2.546368 | TCGTGATTTCGTGAACTTTGGG | 59.454 | 45.455 | 0.00 | 0.00 | 0.00 | 4.12 |
547 | 548 | 2.350388 | CGTGATTTCGTGAACTTTGGGG | 60.350 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
548 | 549 | 2.030274 | GTGATTTCGTGAACTTTGGGGG | 60.030 | 50.000 | 0.00 | 0.00 | 0.00 | 5.40 |
552 | 553 | 2.438800 | TCGTGAACTTTGGGGGAAAA | 57.561 | 45.000 | 0.00 | 0.00 | 0.00 | 2.29 |
554 | 555 | 4.101645 | TCGTGAACTTTGGGGGAAAATA | 57.898 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
555 | 556 | 4.668636 | TCGTGAACTTTGGGGGAAAATAT | 58.331 | 39.130 | 0.00 | 0.00 | 0.00 | 1.28 |
556 | 557 | 4.461081 | TCGTGAACTTTGGGGGAAAATATG | 59.539 | 41.667 | 0.00 | 0.00 | 0.00 | 1.78 |
557 | 558 | 4.461081 | CGTGAACTTTGGGGGAAAATATGA | 59.539 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
558 | 559 | 5.127031 | CGTGAACTTTGGGGGAAAATATGAT | 59.873 | 40.000 | 0.00 | 0.00 | 0.00 | 2.45 |
608 | 611 | 5.964887 | TTTCAAAATCGCAGACCTTTTTG | 57.035 | 34.783 | 0.00 | 0.00 | 42.51 | 2.44 |
617 | 623 | 4.508861 | TCGCAGACCTTTTTGTTAGTGTAC | 59.491 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
629 | 635 | 7.663043 | TTTGTTAGTGTACTTTGGGGAATTT | 57.337 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
630 | 636 | 6.642707 | TGTTAGTGTACTTTGGGGAATTTG | 57.357 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
640 | 646 | 6.128486 | ACTTTGGGGAATTTGCAAGATTTTT | 58.872 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
669 | 675 | 5.667466 | TCCCTTCGTTCCATAATACTTGTC | 58.333 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
671 | 677 | 4.025979 | CCTTCGTTCCATAATACTTGTCGC | 60.026 | 45.833 | 0.00 | 0.00 | 0.00 | 5.19 |
823 | 854 | 2.448705 | GCTCTTCGCTGCCGTTCTC | 61.449 | 63.158 | 0.00 | 0.00 | 35.14 | 2.87 |
824 | 855 | 1.807573 | CTCTTCGCTGCCGTTCTCC | 60.808 | 63.158 | 0.00 | 0.00 | 35.54 | 3.71 |
1027 | 1059 | 2.182030 | CCTTCGCCGTCACTCCTC | 59.818 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
1045 | 1077 | 2.623889 | CCTCCGTCCTCCATGTAAGTAG | 59.376 | 54.545 | 0.00 | 0.00 | 0.00 | 2.57 |
1046 | 1078 | 2.029623 | TCCGTCCTCCATGTAAGTAGC | 58.970 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
1047 | 1079 | 1.068741 | CCGTCCTCCATGTAAGTAGCC | 59.931 | 57.143 | 0.00 | 0.00 | 0.00 | 3.93 |
1048 | 1080 | 1.068741 | CGTCCTCCATGTAAGTAGCCC | 59.931 | 57.143 | 0.00 | 0.00 | 0.00 | 5.19 |
1049 | 1081 | 1.416772 | GTCCTCCATGTAAGTAGCCCC | 59.583 | 57.143 | 0.00 | 0.00 | 0.00 | 5.80 |
1050 | 1082 | 1.009060 | TCCTCCATGTAAGTAGCCCCA | 59.991 | 52.381 | 0.00 | 0.00 | 0.00 | 4.96 |
1051 | 1083 | 1.843851 | CCTCCATGTAAGTAGCCCCAA | 59.156 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
1063 | 1099 | 2.397044 | AGCCCCAACCTCAAATCAAA | 57.603 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1101 | 1137 | 4.590850 | ACCTGTTTCTTGCTGATTTTCC | 57.409 | 40.909 | 0.00 | 0.00 | 0.00 | 3.13 |
1141 | 1177 | 4.451150 | GTCTGCATCCCGACGGCA | 62.451 | 66.667 | 8.86 | 1.97 | 35.96 | 5.69 |
1259 | 1303 | 4.463879 | CGGGCACTCTCAGGCAGG | 62.464 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
1277 | 1321 | 1.441729 | GATCGTGGGGCTCGATTCA | 59.558 | 57.895 | 12.03 | 0.00 | 45.90 | 2.57 |
1278 | 1322 | 0.876342 | GATCGTGGGGCTCGATTCAC | 60.876 | 60.000 | 12.03 | 0.00 | 45.90 | 3.18 |
1279 | 1323 | 1.330655 | ATCGTGGGGCTCGATTCACT | 61.331 | 55.000 | 6.87 | 0.00 | 43.98 | 3.41 |
1283 | 1327 | 1.480954 | GTGGGGCTCGATTCACTCTAA | 59.519 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
1333 | 1377 | 2.304761 | TGTTAGGCTAACAAGGACCTGG | 59.695 | 50.000 | 32.00 | 0.00 | 44.95 | 4.45 |
1349 | 1393 | 0.466189 | CTGGGTCAAGCCGGCAATAT | 60.466 | 55.000 | 31.54 | 8.92 | 38.44 | 1.28 |
1371 | 1415 | 3.007723 | TGCTGAGATAGATCAGGAATGGC | 59.992 | 47.826 | 5.92 | 0.00 | 43.64 | 4.40 |
1426 | 1475 | 2.109128 | TGGTGTGGTGGTTAATGTGGAT | 59.891 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1427 | 1476 | 3.161866 | GGTGTGGTGGTTAATGTGGATT | 58.838 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
1428 | 1477 | 4.202577 | TGGTGTGGTGGTTAATGTGGATTA | 60.203 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
1429 | 1478 | 4.398044 | GGTGTGGTGGTTAATGTGGATTAG | 59.602 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
1430 | 1479 | 5.250200 | GTGTGGTGGTTAATGTGGATTAGA | 58.750 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
1431 | 1480 | 5.123344 | GTGTGGTGGTTAATGTGGATTAGAC | 59.877 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1432 | 1481 | 5.221945 | TGTGGTGGTTAATGTGGATTAGACA | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1433 | 1482 | 5.708230 | GTGGTGGTTAATGTGGATTAGACAA | 59.292 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1434 | 1483 | 6.207810 | GTGGTGGTTAATGTGGATTAGACAAA | 59.792 | 38.462 | 0.00 | 0.00 | 0.00 | 2.83 |
1435 | 1484 | 6.207810 | TGGTGGTTAATGTGGATTAGACAAAC | 59.792 | 38.462 | 0.00 | 0.00 | 0.00 | 2.93 |
1436 | 1485 | 6.433093 | GGTGGTTAATGTGGATTAGACAAACT | 59.567 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
1437 | 1486 | 7.305474 | GTGGTTAATGTGGATTAGACAAACTG | 58.695 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
1438 | 1487 | 7.174253 | GTGGTTAATGTGGATTAGACAAACTGA | 59.826 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
1439 | 1488 | 7.721842 | TGGTTAATGTGGATTAGACAAACTGAA | 59.278 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
1440 | 1489 | 8.739972 | GGTTAATGTGGATTAGACAAACTGAAT | 58.260 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
1441 | 1490 | 9.559958 | GTTAATGTGGATTAGACAAACTGAATG | 57.440 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
1442 | 1491 | 7.765695 | AATGTGGATTAGACAAACTGAATGT | 57.234 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1443 | 1492 | 6.558771 | TGTGGATTAGACAAACTGAATGTG | 57.441 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
1444 | 1493 | 5.473162 | TGTGGATTAGACAAACTGAATGTGG | 59.527 | 40.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1445 | 1494 | 5.705441 | GTGGATTAGACAAACTGAATGTGGA | 59.295 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1449 | 1498 | 4.552166 | AGACAAACTGAATGTGGAAACG | 57.448 | 40.909 | 0.00 | 0.00 | 0.00 | 3.60 |
1455 | 1504 | 0.466372 | TGAATGTGGAAACGGCACCA | 60.466 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1469 | 1518 | 3.006940 | CGGCACCACAAATAGCTTCTAA | 58.993 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
1477 | 1526 | 6.884295 | ACCACAAATAGCTTCTAACAATGCTA | 59.116 | 34.615 | 0.00 | 0.00 | 41.40 | 3.49 |
1478 | 1527 | 7.557719 | ACCACAAATAGCTTCTAACAATGCTAT | 59.442 | 33.333 | 0.00 | 0.00 | 46.67 | 2.97 |
1492 | 1541 | 6.727824 | ACAATGCTATATTGCCGATACTTC | 57.272 | 37.500 | 6.69 | 0.00 | 32.55 | 3.01 |
1515 | 1564 | 6.970484 | TCACTTTCCTCTTTCTTGTTAATGC | 58.030 | 36.000 | 0.00 | 0.00 | 0.00 | 3.56 |
1519 | 1568 | 8.138074 | ACTTTCCTCTTTCTTGTTAATGCTTTC | 58.862 | 33.333 | 0.00 | 0.00 | 0.00 | 2.62 |
1520 | 1569 | 6.575162 | TCCTCTTTCTTGTTAATGCTTTCC | 57.425 | 37.500 | 0.00 | 0.00 | 0.00 | 3.13 |
1521 | 1570 | 6.306987 | TCCTCTTTCTTGTTAATGCTTTCCT | 58.693 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1523 | 1572 | 7.942341 | TCCTCTTTCTTGTTAATGCTTTCCTTA | 59.058 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
1524 | 1573 | 8.576442 | CCTCTTTCTTGTTAATGCTTTCCTTAA | 58.424 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
1525 | 1574 | 9.965824 | CTCTTTCTTGTTAATGCTTTCCTTAAA | 57.034 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
1562 | 1612 | 1.086696 | ATGTTTGGAAGACGCCATCG | 58.913 | 50.000 | 0.00 | 0.00 | 37.86 | 3.84 |
1563 | 1613 | 0.034198 | TGTTTGGAAGACGCCATCGA | 59.966 | 50.000 | 0.00 | 0.00 | 37.86 | 3.59 |
1569 | 1619 | 2.029918 | TGGAAGACGCCATCGATCTATG | 60.030 | 50.000 | 0.00 | 0.21 | 39.41 | 2.23 |
1604 | 1654 | 2.437396 | CCATCCCCAAATGCCAGCC | 61.437 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
1606 | 1656 | 1.686800 | ATCCCCAAATGCCAGCCAC | 60.687 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
1620 | 1670 | 1.135315 | CAGCCACGCTATTTGCACATT | 60.135 | 47.619 | 0.00 | 0.00 | 43.06 | 2.71 |
1637 | 1687 | 3.034635 | ACATTTTGTGGGTAAAGTGGCA | 58.965 | 40.909 | 0.00 | 0.00 | 33.23 | 4.92 |
1642 | 1692 | 0.035176 | GTGGGTAAAGTGGCACCGTA | 59.965 | 55.000 | 15.27 | 3.73 | 35.53 | 4.02 |
1660 | 1722 | 6.483687 | CACCGTAGATTAGCGCTTAAAAATT | 58.516 | 36.000 | 18.68 | 3.18 | 0.00 | 1.82 |
1679 | 1741 | 8.697507 | AAAAATTATCATCCTACTTGCTAGGG | 57.302 | 34.615 | 0.00 | 0.00 | 42.51 | 3.53 |
1692 | 1754 | 1.926426 | GCTAGGGGGCCACTGATTGT | 61.926 | 60.000 | 21.33 | 0.00 | 0.00 | 2.71 |
1695 | 1757 | 0.550147 | AGGGGGCCACTGATTGTACT | 60.550 | 55.000 | 8.00 | 0.00 | 0.00 | 2.73 |
1765 | 1827 | 8.507249 | GTTATTTTGTCATCTTCTAGTTGCTGT | 58.493 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
1798 | 1873 | 1.270305 | CGTCATGTGTTCTGTCACCCT | 60.270 | 52.381 | 0.00 | 0.00 | 37.51 | 4.34 |
1857 | 1939 | 8.534333 | TGCTGAACTAATAAGTACTTGACAAG | 57.466 | 34.615 | 18.56 | 13.77 | 33.75 | 3.16 |
1873 | 1955 | 8.206325 | ACTTGACAAGCACTAATGATCTAATG | 57.794 | 34.615 | 15.24 | 0.00 | 0.00 | 1.90 |
1923 | 2005 | 1.408702 | GCAACAGCTTGGTCCTTGAAA | 59.591 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
2059 | 2141 | 9.791820 | ACTACTGTAAAAACAAACAAATACACC | 57.208 | 29.630 | 0.00 | 0.00 | 0.00 | 4.16 |
2089 | 2171 | 3.573967 | GAGCTTCCCACCTTGATGAAAAA | 59.426 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
2111 | 2193 | 6.453926 | AAGGTTAAACCATTAAACACGTGT | 57.546 | 33.333 | 17.22 | 17.22 | 40.50 | 4.49 |
2116 | 2198 | 1.950909 | ACCATTAAACACGTGTGGGTG | 59.049 | 47.619 | 24.16 | 17.49 | 43.54 | 4.61 |
2139 | 2221 | 1.349026 | CCACATTATCTCGGCTGGGAT | 59.651 | 52.381 | 13.67 | 13.67 | 0.00 | 3.85 |
2147 | 2237 | 4.713792 | ATCTCGGCTGGGATAAAAGAAT | 57.286 | 40.909 | 5.97 | 0.00 | 0.00 | 2.40 |
2149 | 2239 | 2.880890 | CTCGGCTGGGATAAAAGAATGG | 59.119 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2155 | 2245 | 4.723309 | CTGGGATAAAAGAATGGGAGGAG | 58.277 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
2163 | 2253 | 9.634021 | GATAAAAGAATGGGAGGAGAAAGTAAT | 57.366 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2167 | 2257 | 8.855804 | AAGAATGGGAGGAGAAAGTAATAGTA | 57.144 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
2209 | 2299 | 8.991243 | ATGTTAATCATGAGAACAAACAATGG | 57.009 | 30.769 | 22.76 | 0.00 | 36.70 | 3.16 |
2211 | 2301 | 7.866898 | TGTTAATCATGAGAACAAACAATGGTG | 59.133 | 33.333 | 18.78 | 0.00 | 30.37 | 4.17 |
2230 | 2320 | 2.026262 | GTGTAGTGGGACCCAATCATGT | 60.026 | 50.000 | 18.69 | 0.00 | 34.18 | 3.21 |
2273 | 2363 | 8.181904 | TGCTAAAATTCAGGTCTTCATTTCTT | 57.818 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
2283 | 2373 | 4.999950 | GGTCTTCATTTCTTCAGAGCAAGA | 59.000 | 41.667 | 0.00 | 0.00 | 34.54 | 3.02 |
2330 | 2420 | 2.882927 | AGAAAAACCAGCCGAAAACC | 57.117 | 45.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2335 | 2425 | 1.734163 | AACCAGCCGAAAACCGATAG | 58.266 | 50.000 | 0.00 | 0.00 | 41.76 | 2.08 |
2337 | 2427 | 1.276989 | ACCAGCCGAAAACCGATAGAA | 59.723 | 47.619 | 0.00 | 0.00 | 41.76 | 2.10 |
2358 | 2448 | 0.543749 | GGACTCAACCAGCCTAGCAT | 59.456 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2386 | 2476 | 1.575244 | CAGAGCCCATACACATCACG | 58.425 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2431 | 2521 | 3.822735 | CACAAACCAATGGACATCTGAGT | 59.177 | 43.478 | 6.16 | 0.00 | 0.00 | 3.41 |
2444 | 2534 | 1.919240 | TCTGAGTACGGCCAGAAGAA | 58.081 | 50.000 | 2.24 | 0.00 | 36.58 | 2.52 |
2517 | 2607 | 0.625316 | ATGCCCCTGTTGAGTATGCA | 59.375 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
2592 | 2682 | 2.158900 | ACAGAAGCATGATAGAACCCCG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
2662 | 2752 | 5.172934 | TCGCCGAACAAGTAGTTTGATATT | 58.827 | 37.500 | 0.00 | 0.00 | 43.16 | 1.28 |
2812 | 2981 | 5.515106 | TCTGAAATTTGTACCTTATGGGGG | 58.485 | 41.667 | 0.00 | 0.00 | 40.03 | 5.40 |
2880 | 3049 | 1.551452 | ACAGAGACAGTAGAGCCACC | 58.449 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2888 | 3057 | 0.905357 | AGTAGAGCCACCATCCACAC | 59.095 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2911 | 3080 | 6.694411 | CACCACTTGAAGAAGAAGAAATTGTG | 59.306 | 38.462 | 0.00 | 0.00 | 32.98 | 3.33 |
3265 | 3435 | 2.015736 | GATCTTGTGTGATCCGTGCT | 57.984 | 50.000 | 0.00 | 0.00 | 37.47 | 4.40 |
3380 | 3551 | 3.100671 | GGGAGAAGAGAGGAAGCAACTA | 58.899 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3392 | 3563 | 3.699038 | GGAAGCAACTAATTGGTATGGCA | 59.301 | 43.478 | 13.11 | 0.00 | 45.77 | 4.92 |
3395 | 3566 | 2.680841 | GCAACTAATTGGTATGGCACGA | 59.319 | 45.455 | 0.00 | 0.00 | 36.23 | 4.35 |
3412 | 3583 | 1.070758 | ACGAGCAACTTCAGACCATGT | 59.929 | 47.619 | 0.00 | 0.00 | 0.00 | 3.21 |
3428 | 3599 | 5.477984 | AGACCATGTGTTCAATGCTACAATT | 59.522 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3468 | 3639 | 6.015010 | CGATCCTTCCTATCAGGTGAATTAGT | 60.015 | 42.308 | 0.00 | 0.00 | 36.53 | 2.24 |
3504 | 3675 | 4.455606 | CTTTGTGTCTGAGTCCTCCTTTT | 58.544 | 43.478 | 0.00 | 0.00 | 0.00 | 2.27 |
3548 | 3719 | 6.801539 | TCATTTGTAGTGGCTTAGAACTTG | 57.198 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
3666 | 3837 | 5.657302 | AGACAGTAAAGGTACAGAATCCGAT | 59.343 | 40.000 | 0.00 | 0.00 | 32.12 | 4.18 |
3708 | 3879 | 6.017109 | GGAACTTCTTCTGTCAAAAGCATACA | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
3709 | 3880 | 6.942532 | ACTTCTTCTGTCAAAAGCATACAA | 57.057 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
3751 | 3922 | 9.905713 | TGTTTAATCCAAGTAGAATTGCTAGAT | 57.094 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
3811 | 3982 | 3.243643 | GCGCATCAATACCATTTTGCTTC | 59.756 | 43.478 | 0.30 | 0.00 | 0.00 | 3.86 |
3812 | 3983 | 3.483196 | CGCATCAATACCATTTTGCTTCG | 59.517 | 43.478 | 0.00 | 0.00 | 0.00 | 3.79 |
3942 | 4113 | 6.830838 | GTGGTCCTTGATTCCTTCTGATTAAT | 59.169 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
3983 | 4154 | 3.249687 | GAACATGGGGTTCGAAGCT | 57.750 | 52.632 | 25.05 | 5.78 | 45.82 | 3.74 |
4039 | 4213 | 1.192146 | AGAGTTTAGCTCCGGTGGCA | 61.192 | 55.000 | 20.23 | 7.32 | 45.21 | 4.92 |
4069 | 4243 | 1.425428 | CGCCTCATTTCCGCAAGAC | 59.575 | 57.895 | 0.00 | 0.00 | 43.02 | 3.01 |
4075 | 4249 | 2.388232 | ATTTCCGCAAGACCGACGC | 61.388 | 57.895 | 0.00 | 0.00 | 43.02 | 5.19 |
4116 | 4290 | 4.592942 | TGCTCCAGTGCAGAAGAATATTT | 58.407 | 39.130 | 0.00 | 0.00 | 38.12 | 1.40 |
4171 | 4352 | 1.144496 | GCCGATGGCCATTTGCAAT | 59.856 | 52.632 | 26.69 | 4.06 | 44.06 | 3.56 |
4193 | 4374 | 4.500116 | GGTGCGACCGGCTCTCTC | 62.500 | 72.222 | 0.00 | 0.00 | 44.05 | 3.20 |
4194 | 4375 | 4.500116 | GTGCGACCGGCTCTCTCC | 62.500 | 72.222 | 0.00 | 0.00 | 44.05 | 3.71 |
4294 | 4476 | 4.748102 | AGCCACACCGAACATTATTATACG | 59.252 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
4295 | 4477 | 4.746115 | GCCACACCGAACATTATTATACGA | 59.254 | 41.667 | 0.00 | 0.00 | 0.00 | 3.43 |
4296 | 4478 | 5.332808 | GCCACACCGAACATTATTATACGAC | 60.333 | 44.000 | 0.00 | 0.00 | 0.00 | 4.34 |
4297 | 4479 | 5.981315 | CCACACCGAACATTATTATACGACT | 59.019 | 40.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4316 | 4498 | 4.058817 | GACTGTGGAAGTCGAGAAATTGT | 58.941 | 43.478 | 0.00 | 0.00 | 45.76 | 2.71 |
4411 | 4597 | 2.153247 | CGACTGTTCTTGTCACTAACGC | 59.847 | 50.000 | 0.00 | 0.00 | 34.37 | 4.84 |
4464 | 4662 | 2.005451 | GCATATGGGATCGTCTCATGC | 58.995 | 52.381 | 4.56 | 4.76 | 38.23 | 4.06 |
4474 | 4672 | 1.434622 | CGTCTCATGCTGGCCATCAC | 61.435 | 60.000 | 12.34 | 2.18 | 29.71 | 3.06 |
4512 | 4710 | 4.742201 | CTGGGTCGTGCCGTGGAG | 62.742 | 72.222 | 0.00 | 0.00 | 38.44 | 3.86 |
4559 | 4757 | 0.251033 | AAGCCACTCAATGCAGCTGA | 60.251 | 50.000 | 20.43 | 2.70 | 33.18 | 4.26 |
4642 | 4846 | 3.334751 | CGCGTGCGTTCTTGACCA | 61.335 | 61.111 | 6.00 | 0.00 | 34.35 | 4.02 |
4643 | 4847 | 2.248431 | GCGTGCGTTCTTGACCAC | 59.752 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
4659 | 4863 | 3.639099 | CACATCTTGTGGCTGTCCT | 57.361 | 52.632 | 0.00 | 0.00 | 44.27 | 3.85 |
4660 | 4864 | 1.446907 | CACATCTTGTGGCTGTCCTC | 58.553 | 55.000 | 0.00 | 0.00 | 44.27 | 3.71 |
4664 | 4868 | 0.687354 | TCTTGTGGCTGTCCTCTTCC | 59.313 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4665 | 4869 | 0.397941 | CTTGTGGCTGTCCTCTTCCA | 59.602 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
4666 | 4870 | 1.004044 | CTTGTGGCTGTCCTCTTCCAT | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
4667 | 4871 | 1.067295 | TGTGGCTGTCCTCTTCCATT | 58.933 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4668 | 4872 | 1.003580 | TGTGGCTGTCCTCTTCCATTC | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
4669 | 4873 | 1.003580 | GTGGCTGTCCTCTTCCATTCA | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
4670 | 4874 | 1.918262 | TGGCTGTCCTCTTCCATTCAT | 59.082 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
4672 | 4876 | 2.570135 | GCTGTCCTCTTCCATTCATCC | 58.430 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
4674 | 4878 | 2.169352 | CTGTCCTCTTCCATTCATCCGT | 59.831 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4675 | 4879 | 2.571653 | TGTCCTCTTCCATTCATCCGTT | 59.428 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
4677 | 4881 | 2.571653 | TCCTCTTCCATTCATCCGTTGT | 59.428 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
4678 | 4882 | 3.772572 | TCCTCTTCCATTCATCCGTTGTA | 59.227 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
4679 | 4883 | 4.408921 | TCCTCTTCCATTCATCCGTTGTAT | 59.591 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
4681 | 4885 | 6.099125 | TCCTCTTCCATTCATCCGTTGTATTA | 59.901 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
4683 | 4887 | 6.645306 | TCTTCCATTCATCCGTTGTATTACA | 58.355 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
4685 | 4889 | 4.806775 | TCCATTCATCCGTTGTATTACACG | 59.193 | 41.667 | 0.00 | 4.28 | 0.00 | 4.49 |
4686 | 4890 | 4.569162 | CCATTCATCCGTTGTATTACACGT | 59.431 | 41.667 | 13.72 | 0.00 | 0.00 | 4.49 |
4687 | 4891 | 5.749588 | CCATTCATCCGTTGTATTACACGTA | 59.250 | 40.000 | 13.72 | 3.63 | 0.00 | 3.57 |
4688 | 4892 | 6.291955 | CCATTCATCCGTTGTATTACACGTAC | 60.292 | 42.308 | 13.72 | 3.64 | 0.00 | 3.67 |
4689 | 4893 | 5.565592 | TCATCCGTTGTATTACACGTACT | 57.434 | 39.130 | 13.72 | 0.00 | 0.00 | 2.73 |
4694 | 4914 | 3.236754 | CGTTGTATTACACGTACTCGCAG | 59.763 | 47.826 | 0.00 | 0.00 | 41.18 | 5.18 |
4696 | 4916 | 4.888038 | TGTATTACACGTACTCGCAGAT | 57.112 | 40.909 | 0.00 | 0.00 | 41.18 | 2.90 |
4699 | 4919 | 0.654160 | TACACGTACTCGCAGATCGG | 59.346 | 55.000 | 0.00 | 0.00 | 41.18 | 4.18 |
4708 | 4928 | 0.173481 | TCGCAGATCGGTTCCAGAAG | 59.827 | 55.000 | 0.00 | 0.00 | 39.05 | 2.85 |
4719 | 4939 | 1.666189 | GTTCCAGAAGGCGAATAGTGC | 59.334 | 52.381 | 0.00 | 0.00 | 33.74 | 4.40 |
4722 | 4942 | 1.134699 | CCAGAAGGCGAATAGTGCTGA | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
4725 | 4945 | 1.328986 | GAAGGCGAATAGTGCTGAAGC | 59.671 | 52.381 | 0.00 | 0.00 | 42.50 | 3.86 |
4730 | 4955 | 2.478134 | GCGAATAGTGCTGAAGCTATGG | 59.522 | 50.000 | 3.61 | 0.00 | 42.66 | 2.74 |
4781 | 5019 | 3.121738 | ACCGATCCGAATAAATGGGAC | 57.878 | 47.619 | 0.00 | 0.00 | 31.52 | 4.46 |
4809 | 5050 | 1.068610 | TGTTTTTCTATGCACTGCCGC | 60.069 | 47.619 | 0.00 | 0.00 | 0.00 | 6.53 |
4836 | 5077 | 4.024133 | TCAAGTACGTACGTTGTCTTGCTA | 60.024 | 41.667 | 31.68 | 22.64 | 34.08 | 3.49 |
4916 | 5163 | 2.229675 | TCATATCACGCAGCTGGAAG | 57.770 | 50.000 | 17.12 | 4.74 | 0.00 | 3.46 |
4932 | 5179 | 2.646117 | GAAGGGAAGATCGACCGGGC | 62.646 | 65.000 | 6.32 | 0.00 | 0.00 | 6.13 |
4957 | 5205 | 4.023450 | CGTGAATCGTGATAGGTAAGCCTA | 60.023 | 45.833 | 0.00 | 0.00 | 41.84 | 3.93 |
4984 | 5232 | 0.905357 | CCGACCATCCAGAAGAGGTT | 59.095 | 55.000 | 0.00 | 0.00 | 33.77 | 3.50 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 5.372343 | AGCTTTTGAAACCTTCCCAAAAT | 57.628 | 34.783 | 0.00 | 0.00 | 38.56 | 1.82 |
2 | 3 | 4.383661 | GGAAGCTTTTGAAACCTTCCCAAA | 60.384 | 41.667 | 18.65 | 0.00 | 41.64 | 3.28 |
3 | 4 | 3.133901 | GGAAGCTTTTGAAACCTTCCCAA | 59.866 | 43.478 | 18.65 | 0.00 | 41.64 | 4.12 |
4 | 5 | 2.698274 | GGAAGCTTTTGAAACCTTCCCA | 59.302 | 45.455 | 18.65 | 0.00 | 41.64 | 4.37 |
6 | 7 | 2.965831 | AGGGAAGCTTTTGAAACCTTCC | 59.034 | 45.455 | 20.15 | 20.15 | 44.51 | 3.46 |
7 | 8 | 3.800261 | GCAGGGAAGCTTTTGAAACCTTC | 60.800 | 47.826 | 0.00 | 8.29 | 32.43 | 3.46 |
8 | 9 | 2.103094 | GCAGGGAAGCTTTTGAAACCTT | 59.897 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
9 | 10 | 1.688735 | GCAGGGAAGCTTTTGAAACCT | 59.311 | 47.619 | 0.00 | 0.00 | 0.00 | 3.50 |
10 | 11 | 1.270305 | GGCAGGGAAGCTTTTGAAACC | 60.270 | 52.381 | 0.00 | 0.00 | 34.17 | 3.27 |
11 | 12 | 1.602920 | CGGCAGGGAAGCTTTTGAAAC | 60.603 | 52.381 | 0.00 | 0.00 | 34.17 | 2.78 |
12 | 13 | 0.673437 | CGGCAGGGAAGCTTTTGAAA | 59.327 | 50.000 | 0.00 | 0.00 | 34.17 | 2.69 |
13 | 14 | 1.178534 | CCGGCAGGGAAGCTTTTGAA | 61.179 | 55.000 | 0.00 | 0.00 | 38.47 | 2.69 |
14 | 15 | 1.603455 | CCGGCAGGGAAGCTTTTGA | 60.603 | 57.895 | 0.00 | 0.00 | 38.47 | 2.69 |
15 | 16 | 1.463553 | AACCGGCAGGGAAGCTTTTG | 61.464 | 55.000 | 8.08 | 1.14 | 43.47 | 2.44 |
16 | 17 | 0.759060 | AAACCGGCAGGGAAGCTTTT | 60.759 | 50.000 | 8.08 | 0.00 | 43.47 | 2.27 |
17 | 18 | 0.759060 | AAAACCGGCAGGGAAGCTTT | 60.759 | 50.000 | 8.08 | 0.00 | 43.47 | 3.51 |
18 | 19 | 1.152546 | AAAACCGGCAGGGAAGCTT | 60.153 | 52.632 | 8.08 | 0.00 | 43.47 | 3.74 |
19 | 20 | 1.903404 | CAAAACCGGCAGGGAAGCT | 60.903 | 57.895 | 8.08 | 0.00 | 43.47 | 3.74 |
20 | 21 | 2.650778 | CAAAACCGGCAGGGAAGC | 59.349 | 61.111 | 8.08 | 0.00 | 43.47 | 3.86 |
21 | 22 | 0.825840 | TTCCAAAACCGGCAGGGAAG | 60.826 | 55.000 | 8.08 | 0.00 | 43.47 | 3.46 |
22 | 23 | 0.825840 | CTTCCAAAACCGGCAGGGAA | 60.826 | 55.000 | 8.08 | 14.45 | 43.47 | 3.97 |
23 | 24 | 1.228429 | CTTCCAAAACCGGCAGGGA | 60.228 | 57.895 | 8.08 | 0.00 | 43.47 | 4.20 |
24 | 25 | 2.931068 | GCTTCCAAAACCGGCAGGG | 61.931 | 63.158 | 8.08 | 0.00 | 43.47 | 4.45 |
25 | 26 | 1.463553 | AAGCTTCCAAAACCGGCAGG | 61.464 | 55.000 | 0.00 | 0.00 | 45.13 | 4.85 |
26 | 27 | 0.389025 | AAAGCTTCCAAAACCGGCAG | 59.611 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
27 | 28 | 0.827368 | AAAAGCTTCCAAAACCGGCA | 59.173 | 45.000 | 0.00 | 0.00 | 0.00 | 5.69 |
28 | 29 | 1.217001 | CAAAAGCTTCCAAAACCGGC | 58.783 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
29 | 30 | 1.540146 | CCCAAAAGCTTCCAAAACCGG | 60.540 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
30 | 31 | 1.138069 | ACCCAAAAGCTTCCAAAACCG | 59.862 | 47.619 | 0.00 | 0.00 | 0.00 | 4.44 |
31 | 32 | 2.942376 | CAACCCAAAAGCTTCCAAAACC | 59.058 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
32 | 33 | 2.942376 | CCAACCCAAAAGCTTCCAAAAC | 59.058 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
33 | 34 | 2.092699 | CCCAACCCAAAAGCTTCCAAAA | 60.093 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
34 | 35 | 1.488393 | CCCAACCCAAAAGCTTCCAAA | 59.512 | 47.619 | 0.00 | 0.00 | 0.00 | 3.28 |
35 | 36 | 1.127343 | CCCAACCCAAAAGCTTCCAA | 58.873 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
36 | 37 | 0.031616 | ACCCAACCCAAAAGCTTCCA | 60.032 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
37 | 38 | 1.128200 | AACCCAACCCAAAAGCTTCC | 58.872 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
38 | 39 | 3.275617 | AAAACCCAACCCAAAAGCTTC | 57.724 | 42.857 | 0.00 | 0.00 | 0.00 | 3.86 |
39 | 40 | 5.381184 | AATAAAACCCAACCCAAAAGCTT | 57.619 | 34.783 | 0.00 | 0.00 | 0.00 | 3.74 |
40 | 41 | 5.381184 | AAATAAAACCCAACCCAAAAGCT | 57.619 | 34.783 | 0.00 | 0.00 | 0.00 | 3.74 |
41 | 42 | 5.825679 | AGAAAATAAAACCCAACCCAAAAGC | 59.174 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
42 | 43 | 9.567776 | AATAGAAAATAAAACCCAACCCAAAAG | 57.432 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
43 | 44 | 9.922477 | AAATAGAAAATAAAACCCAACCCAAAA | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 2.44 |
44 | 45 | 9.922477 | AAAATAGAAAATAAAACCCAACCCAAA | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 3.28 |
45 | 46 | 9.343539 | CAAAATAGAAAATAAAACCCAACCCAA | 57.656 | 29.630 | 0.00 | 0.00 | 0.00 | 4.12 |
46 | 47 | 7.939588 | CCAAAATAGAAAATAAAACCCAACCCA | 59.060 | 33.333 | 0.00 | 0.00 | 0.00 | 4.51 |
47 | 48 | 7.392113 | CCCAAAATAGAAAATAAAACCCAACCC | 59.608 | 37.037 | 0.00 | 0.00 | 0.00 | 4.11 |
48 | 49 | 7.940137 | ACCCAAAATAGAAAATAAAACCCAACC | 59.060 | 33.333 | 0.00 | 0.00 | 0.00 | 3.77 |
49 | 50 | 8.911918 | ACCCAAAATAGAAAATAAAACCCAAC | 57.088 | 30.769 | 0.00 | 0.00 | 0.00 | 3.77 |
50 | 51 | 9.922477 | AAACCCAAAATAGAAAATAAAACCCAA | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 4.12 |
51 | 52 | 9.922477 | AAAACCCAAAATAGAAAATAAAACCCA | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 4.51 |
66 | 67 | 9.772973 | GGAGTATAAAACTGAAAAACCCAAAAT | 57.227 | 29.630 | 0.00 | 0.00 | 39.07 | 1.82 |
67 | 68 | 8.205512 | GGGAGTATAAAACTGAAAAACCCAAAA | 58.794 | 33.333 | 0.00 | 0.00 | 39.07 | 2.44 |
68 | 69 | 7.565768 | AGGGAGTATAAAACTGAAAAACCCAAA | 59.434 | 33.333 | 0.00 | 0.00 | 39.07 | 3.28 |
69 | 70 | 7.070629 | AGGGAGTATAAAACTGAAAAACCCAA | 58.929 | 34.615 | 0.00 | 0.00 | 39.07 | 4.12 |
70 | 71 | 6.616577 | AGGGAGTATAAAACTGAAAAACCCA | 58.383 | 36.000 | 0.00 | 0.00 | 39.07 | 4.51 |
71 | 72 | 7.534723 | AAGGGAGTATAAAACTGAAAAACCC | 57.465 | 36.000 | 0.00 | 0.00 | 39.07 | 4.11 |
72 | 73 | 8.635328 | TCAAAGGGAGTATAAAACTGAAAAACC | 58.365 | 33.333 | 0.00 | 0.00 | 39.07 | 3.27 |
73 | 74 | 9.459640 | GTCAAAGGGAGTATAAAACTGAAAAAC | 57.540 | 33.333 | 0.00 | 0.00 | 39.07 | 2.43 |
74 | 75 | 8.635328 | GGTCAAAGGGAGTATAAAACTGAAAAA | 58.365 | 33.333 | 0.00 | 0.00 | 39.07 | 1.94 |
75 | 76 | 7.040961 | CGGTCAAAGGGAGTATAAAACTGAAAA | 60.041 | 37.037 | 0.00 | 0.00 | 39.07 | 2.29 |
76 | 77 | 6.428771 | CGGTCAAAGGGAGTATAAAACTGAAA | 59.571 | 38.462 | 0.00 | 0.00 | 39.07 | 2.69 |
77 | 78 | 5.935789 | CGGTCAAAGGGAGTATAAAACTGAA | 59.064 | 40.000 | 0.00 | 0.00 | 39.07 | 3.02 |
78 | 79 | 5.012354 | ACGGTCAAAGGGAGTATAAAACTGA | 59.988 | 40.000 | 0.00 | 0.00 | 39.07 | 3.41 |
79 | 80 | 5.243207 | ACGGTCAAAGGGAGTATAAAACTG | 58.757 | 41.667 | 0.00 | 0.00 | 39.07 | 3.16 |
80 | 81 | 5.494390 | ACGGTCAAAGGGAGTATAAAACT | 57.506 | 39.130 | 0.00 | 0.00 | 42.80 | 2.66 |
81 | 82 | 6.875726 | AGTAACGGTCAAAGGGAGTATAAAAC | 59.124 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
82 | 83 | 7.008021 | AGTAACGGTCAAAGGGAGTATAAAA | 57.992 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
83 | 84 | 6.610075 | AGTAACGGTCAAAGGGAGTATAAA | 57.390 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
84 | 85 | 7.716799 | TTAGTAACGGTCAAAGGGAGTATAA | 57.283 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
85 | 86 | 7.902920 | ATTAGTAACGGTCAAAGGGAGTATA | 57.097 | 36.000 | 0.00 | 0.00 | 0.00 | 1.47 |
86 | 87 | 6.803366 | ATTAGTAACGGTCAAAGGGAGTAT | 57.197 | 37.500 | 0.00 | 0.00 | 0.00 | 2.12 |
87 | 88 | 6.014327 | ACAATTAGTAACGGTCAAAGGGAGTA | 60.014 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
88 | 89 | 5.221783 | ACAATTAGTAACGGTCAAAGGGAGT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
89 | 90 | 5.243207 | ACAATTAGTAACGGTCAAAGGGAG | 58.757 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
90 | 91 | 5.012354 | AGACAATTAGTAACGGTCAAAGGGA | 59.988 | 40.000 | 14.72 | 0.00 | 0.00 | 4.20 |
91 | 92 | 5.243207 | AGACAATTAGTAACGGTCAAAGGG | 58.757 | 41.667 | 14.72 | 0.00 | 0.00 | 3.95 |
92 | 93 | 6.164176 | AGAGACAATTAGTAACGGTCAAAGG | 58.836 | 40.000 | 14.72 | 0.00 | 0.00 | 3.11 |
93 | 94 | 7.653767 | AAGAGACAATTAGTAACGGTCAAAG | 57.346 | 36.000 | 14.72 | 0.00 | 0.00 | 2.77 |
94 | 95 | 9.715121 | AATAAGAGACAATTAGTAACGGTCAAA | 57.285 | 29.630 | 14.72 | 2.34 | 0.00 | 2.69 |
95 | 96 | 9.715121 | AAATAAGAGACAATTAGTAACGGTCAA | 57.285 | 29.630 | 14.72 | 2.59 | 0.00 | 3.18 |
125 | 126 | 8.639761 | ACTGTCACTAATTTAGTACAACTCTGT | 58.360 | 33.333 | 8.71 | 5.83 | 37.23 | 3.41 |
126 | 127 | 9.477484 | AACTGTCACTAATTTAGTACAACTCTG | 57.523 | 33.333 | 8.71 | 5.36 | 37.23 | 3.35 |
145 | 146 | 9.573166 | CCTTTAATCCATCCATATTAACTGTCA | 57.427 | 33.333 | 0.00 | 0.00 | 29.58 | 3.58 |
146 | 147 | 9.014297 | CCCTTTAATCCATCCATATTAACTGTC | 57.986 | 37.037 | 0.00 | 0.00 | 29.58 | 3.51 |
147 | 148 | 8.732854 | TCCCTTTAATCCATCCATATTAACTGT | 58.267 | 33.333 | 0.00 | 0.00 | 29.58 | 3.55 |
148 | 149 | 9.586732 | TTCCCTTTAATCCATCCATATTAACTG | 57.413 | 33.333 | 0.00 | 0.00 | 29.58 | 3.16 |
232 | 233 | 8.784176 | CGCTTTTCAAATTTTCGAACAATTTTT | 58.216 | 25.926 | 19.39 | 3.12 | 32.57 | 1.94 |
233 | 234 | 7.045031 | GCGCTTTTCAAATTTTCGAACAATTTT | 60.045 | 29.630 | 19.39 | 7.66 | 32.57 | 1.82 |
234 | 235 | 6.410625 | GCGCTTTTCAAATTTTCGAACAATTT | 59.589 | 30.769 | 17.64 | 17.64 | 34.75 | 1.82 |
235 | 236 | 5.901336 | GCGCTTTTCAAATTTTCGAACAATT | 59.099 | 32.000 | 0.00 | 5.02 | 0.00 | 2.32 |
236 | 237 | 5.234116 | AGCGCTTTTCAAATTTTCGAACAAT | 59.766 | 32.000 | 2.64 | 0.00 | 0.00 | 2.71 |
237 | 238 | 4.564769 | AGCGCTTTTCAAATTTTCGAACAA | 59.435 | 33.333 | 2.64 | 0.00 | 0.00 | 2.83 |
238 | 239 | 4.109050 | AGCGCTTTTCAAATTTTCGAACA | 58.891 | 34.783 | 2.64 | 0.00 | 0.00 | 3.18 |
239 | 240 | 4.206200 | TGAGCGCTTTTCAAATTTTCGAAC | 59.794 | 37.500 | 13.26 | 0.00 | 0.00 | 3.95 |
240 | 241 | 4.355437 | TGAGCGCTTTTCAAATTTTCGAA | 58.645 | 34.783 | 13.26 | 0.00 | 0.00 | 3.71 |
241 | 242 | 3.958704 | TGAGCGCTTTTCAAATTTTCGA | 58.041 | 36.364 | 13.26 | 0.00 | 0.00 | 3.71 |
242 | 243 | 4.148696 | ACATGAGCGCTTTTCAAATTTTCG | 59.851 | 37.500 | 13.26 | 0.00 | 0.00 | 3.46 |
243 | 244 | 5.580911 | ACATGAGCGCTTTTCAAATTTTC | 57.419 | 34.783 | 13.26 | 0.00 | 0.00 | 2.29 |
244 | 245 | 5.989551 | AACATGAGCGCTTTTCAAATTTT | 57.010 | 30.435 | 13.26 | 0.00 | 0.00 | 1.82 |
245 | 246 | 5.989551 | AAACATGAGCGCTTTTCAAATTT | 57.010 | 30.435 | 13.26 | 7.67 | 0.00 | 1.82 |
246 | 247 | 5.050159 | GGAAAACATGAGCGCTTTTCAAATT | 60.050 | 36.000 | 24.97 | 11.74 | 36.17 | 1.82 |
247 | 248 | 4.448732 | GGAAAACATGAGCGCTTTTCAAAT | 59.551 | 37.500 | 24.97 | 7.62 | 36.17 | 2.32 |
248 | 249 | 3.801594 | GGAAAACATGAGCGCTTTTCAAA | 59.198 | 39.130 | 24.97 | 5.38 | 36.17 | 2.69 |
249 | 250 | 3.181482 | TGGAAAACATGAGCGCTTTTCAA | 60.181 | 39.130 | 24.97 | 16.13 | 36.17 | 2.69 |
250 | 251 | 2.360483 | TGGAAAACATGAGCGCTTTTCA | 59.640 | 40.909 | 24.97 | 15.25 | 36.17 | 2.69 |
251 | 252 | 3.011949 | TGGAAAACATGAGCGCTTTTC | 57.988 | 42.857 | 13.26 | 16.86 | 34.48 | 2.29 |
252 | 253 | 3.451141 | TTGGAAAACATGAGCGCTTTT | 57.549 | 38.095 | 13.26 | 7.69 | 0.00 | 2.27 |
253 | 254 | 3.665745 | ATTGGAAAACATGAGCGCTTT | 57.334 | 38.095 | 13.26 | 0.00 | 0.00 | 3.51 |
254 | 255 | 3.665745 | AATTGGAAAACATGAGCGCTT | 57.334 | 38.095 | 13.26 | 0.00 | 0.00 | 4.68 |
255 | 256 | 3.665745 | AAATTGGAAAACATGAGCGCT | 57.334 | 38.095 | 11.27 | 11.27 | 0.00 | 5.92 |
256 | 257 | 4.730600 | AAAAATTGGAAAACATGAGCGC | 57.269 | 36.364 | 0.00 | 0.00 | 0.00 | 5.92 |
274 | 275 | 6.866179 | TTTTACTAAAAGCGCGAACAAAAA | 57.134 | 29.167 | 12.10 | 2.01 | 0.00 | 1.94 |
275 | 276 | 7.432838 | AGAATTTTACTAAAAGCGCGAACAAAA | 59.567 | 29.630 | 12.10 | 4.38 | 33.22 | 2.44 |
276 | 277 | 6.913673 | AGAATTTTACTAAAAGCGCGAACAAA | 59.086 | 30.769 | 12.10 | 0.00 | 33.22 | 2.83 |
277 | 278 | 6.432107 | AGAATTTTACTAAAAGCGCGAACAA | 58.568 | 32.000 | 12.10 | 0.00 | 33.22 | 2.83 |
278 | 279 | 5.992729 | AGAATTTTACTAAAAGCGCGAACA | 58.007 | 33.333 | 12.10 | 0.00 | 33.22 | 3.18 |
279 | 280 | 6.575942 | TCAAGAATTTTACTAAAAGCGCGAAC | 59.424 | 34.615 | 12.10 | 0.00 | 33.22 | 3.95 |
280 | 281 | 6.660722 | TCAAGAATTTTACTAAAAGCGCGAA | 58.339 | 32.000 | 12.10 | 0.00 | 33.22 | 4.70 |
281 | 282 | 6.230849 | TCAAGAATTTTACTAAAAGCGCGA | 57.769 | 33.333 | 12.10 | 0.00 | 33.22 | 5.87 |
282 | 283 | 6.904954 | TTCAAGAATTTTACTAAAAGCGCG | 57.095 | 33.333 | 0.00 | 0.00 | 33.22 | 6.86 |
295 | 296 | 9.934190 | CGGTCATTTTTGAAATTTCAAGAATTT | 57.066 | 25.926 | 31.72 | 19.38 | 44.59 | 1.82 |
296 | 297 | 8.069574 | GCGGTCATTTTTGAAATTTCAAGAATT | 58.930 | 29.630 | 31.72 | 20.81 | 44.59 | 2.17 |
297 | 298 | 7.226325 | TGCGGTCATTTTTGAAATTTCAAGAAT | 59.774 | 29.630 | 29.95 | 29.95 | 46.53 | 2.40 |
298 | 299 | 6.536582 | TGCGGTCATTTTTGAAATTTCAAGAA | 59.463 | 30.769 | 28.70 | 28.70 | 46.68 | 2.52 |
299 | 300 | 6.045318 | TGCGGTCATTTTTGAAATTTCAAGA | 58.955 | 32.000 | 27.52 | 22.70 | 46.68 | 3.02 |
300 | 301 | 6.284475 | TGCGGTCATTTTTGAAATTTCAAG | 57.716 | 33.333 | 27.52 | 18.65 | 46.68 | 3.02 |
301 | 302 | 6.857777 | ATGCGGTCATTTTTGAAATTTCAA | 57.142 | 29.167 | 26.01 | 26.01 | 44.78 | 2.69 |
302 | 303 | 6.857777 | AATGCGGTCATTTTTGAAATTTCA | 57.142 | 29.167 | 16.91 | 16.91 | 39.78 | 2.69 |
314 | 315 | 9.429359 | TCAAACATATTTTTAAATGCGGTCATT | 57.571 | 25.926 | 0.00 | 0.00 | 44.32 | 2.57 |
315 | 316 | 8.994429 | TCAAACATATTTTTAAATGCGGTCAT | 57.006 | 26.923 | 0.00 | 0.00 | 33.53 | 3.06 |
316 | 317 | 8.818141 | TTCAAACATATTTTTAAATGCGGTCA | 57.182 | 26.923 | 0.00 | 0.00 | 0.00 | 4.02 |
342 | 343 | 9.739276 | TCTTGGAACTATGACAACTATTGAAAT | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
343 | 344 | 9.219603 | CTCTTGGAACTATGACAACTATTGAAA | 57.780 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
344 | 345 | 8.593679 | TCTCTTGGAACTATGACAACTATTGAA | 58.406 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
345 | 346 | 8.134202 | TCTCTTGGAACTATGACAACTATTGA | 57.866 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
346 | 347 | 8.777865 | TTCTCTTGGAACTATGACAACTATTG | 57.222 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
347 | 348 | 9.388506 | CATTCTCTTGGAACTATGACAACTATT | 57.611 | 33.333 | 0.00 | 0.00 | 36.70 | 1.73 |
348 | 349 | 8.543774 | ACATTCTCTTGGAACTATGACAACTAT | 58.456 | 33.333 | 0.00 | 0.00 | 36.70 | 2.12 |
349 | 350 | 7.907389 | ACATTCTCTTGGAACTATGACAACTA | 58.093 | 34.615 | 0.00 | 0.00 | 36.70 | 2.24 |
350 | 351 | 6.773638 | ACATTCTCTTGGAACTATGACAACT | 58.226 | 36.000 | 0.00 | 0.00 | 36.70 | 3.16 |
351 | 352 | 7.440523 | AACATTCTCTTGGAACTATGACAAC | 57.559 | 36.000 | 0.00 | 0.00 | 36.70 | 3.32 |
352 | 353 | 9.567776 | TTTAACATTCTCTTGGAACTATGACAA | 57.432 | 29.630 | 0.00 | 0.00 | 36.70 | 3.18 |
353 | 354 | 9.739276 | ATTTAACATTCTCTTGGAACTATGACA | 57.261 | 29.630 | 0.00 | 0.00 | 36.70 | 3.58 |
397 | 398 | 9.224267 | TGAAAATGTGAACAGATTTTTGGAAAA | 57.776 | 25.926 | 18.61 | 4.50 | 42.13 | 2.29 |
398 | 399 | 8.783833 | TGAAAATGTGAACAGATTTTTGGAAA | 57.216 | 26.923 | 18.61 | 5.72 | 42.13 | 3.13 |
399 | 400 | 8.783833 | TTGAAAATGTGAACAGATTTTTGGAA | 57.216 | 26.923 | 18.61 | 11.83 | 42.13 | 3.53 |
400 | 401 | 8.783833 | TTTGAAAATGTGAACAGATTTTTGGA | 57.216 | 26.923 | 18.61 | 9.12 | 42.13 | 3.53 |
401 | 402 | 9.493206 | CTTTTGAAAATGTGAACAGATTTTTGG | 57.507 | 29.630 | 18.61 | 8.21 | 42.13 | 3.28 |
405 | 406 | 9.218440 | ACAACTTTTGAAAATGTGAACAGATTT | 57.782 | 25.926 | 4.48 | 4.48 | 36.06 | 2.17 |
406 | 407 | 8.776376 | ACAACTTTTGAAAATGTGAACAGATT | 57.224 | 26.923 | 7.46 | 0.00 | 0.00 | 2.40 |
407 | 408 | 8.776376 | AACAACTTTTGAAAATGTGAACAGAT | 57.224 | 26.923 | 7.46 | 0.00 | 0.00 | 2.90 |
408 | 409 | 8.494347 | CAAACAACTTTTGAAAATGTGAACAGA | 58.506 | 29.630 | 7.46 | 0.00 | 0.00 | 3.41 |
409 | 410 | 8.281893 | ACAAACAACTTTTGAAAATGTGAACAG | 58.718 | 29.630 | 3.81 | 0.00 | 33.83 | 3.16 |
410 | 411 | 8.147642 | ACAAACAACTTTTGAAAATGTGAACA | 57.852 | 26.923 | 3.81 | 0.00 | 33.83 | 3.18 |
411 | 412 | 9.444534 | AAACAAACAACTTTTGAAAATGTGAAC | 57.555 | 25.926 | 3.81 | 0.00 | 33.83 | 3.18 |
425 | 426 | 8.611757 | GCCTATGAATTCAAAAACAAACAACTT | 58.388 | 29.630 | 13.09 | 0.00 | 0.00 | 2.66 |
426 | 427 | 7.986889 | AGCCTATGAATTCAAAAACAAACAACT | 59.013 | 29.630 | 13.09 | 0.00 | 0.00 | 3.16 |
427 | 428 | 8.141835 | AGCCTATGAATTCAAAAACAAACAAC | 57.858 | 30.769 | 13.09 | 0.00 | 0.00 | 3.32 |
428 | 429 | 8.729805 | AAGCCTATGAATTCAAAAACAAACAA | 57.270 | 26.923 | 13.09 | 0.00 | 0.00 | 2.83 |
429 | 430 | 8.729805 | AAAGCCTATGAATTCAAAAACAAACA | 57.270 | 26.923 | 13.09 | 0.00 | 0.00 | 2.83 |
432 | 433 | 9.388506 | TGAAAAAGCCTATGAATTCAAAAACAA | 57.611 | 25.926 | 13.09 | 0.00 | 0.00 | 2.83 |
433 | 434 | 8.954950 | TGAAAAAGCCTATGAATTCAAAAACA | 57.045 | 26.923 | 13.09 | 0.28 | 0.00 | 2.83 |
436 | 437 | 9.612066 | ACTTTGAAAAAGCCTATGAATTCAAAA | 57.388 | 25.926 | 13.09 | 2.94 | 42.64 | 2.44 |
437 | 438 | 9.612066 | AACTTTGAAAAAGCCTATGAATTCAAA | 57.388 | 25.926 | 13.09 | 10.08 | 41.68 | 2.69 |
438 | 439 | 9.260002 | GAACTTTGAAAAAGCCTATGAATTCAA | 57.740 | 29.630 | 13.09 | 1.39 | 35.63 | 2.69 |
439 | 440 | 8.420222 | TGAACTTTGAAAAAGCCTATGAATTCA | 58.580 | 29.630 | 11.26 | 11.26 | 0.00 | 2.57 |
440 | 441 | 8.703336 | GTGAACTTTGAAAAAGCCTATGAATTC | 58.297 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
441 | 442 | 7.382218 | CGTGAACTTTGAAAAAGCCTATGAATT | 59.618 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
442 | 443 | 6.863126 | CGTGAACTTTGAAAAAGCCTATGAAT | 59.137 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
443 | 444 | 6.038825 | TCGTGAACTTTGAAAAAGCCTATGAA | 59.961 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
444 | 445 | 5.529430 | TCGTGAACTTTGAAAAAGCCTATGA | 59.471 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
445 | 446 | 5.757886 | TCGTGAACTTTGAAAAAGCCTATG | 58.242 | 37.500 | 0.00 | 0.00 | 0.00 | 2.23 |
446 | 447 | 6.183360 | TGTTCGTGAACTTTGAAAAAGCCTAT | 60.183 | 34.615 | 13.40 | 0.00 | 41.67 | 2.57 |
447 | 448 | 5.124138 | TGTTCGTGAACTTTGAAAAAGCCTA | 59.876 | 36.000 | 13.40 | 0.00 | 41.67 | 3.93 |
448 | 449 | 4.082463 | TGTTCGTGAACTTTGAAAAAGCCT | 60.082 | 37.500 | 13.40 | 0.00 | 41.67 | 4.58 |
449 | 450 | 4.170256 | TGTTCGTGAACTTTGAAAAAGCC | 58.830 | 39.130 | 13.40 | 0.00 | 41.67 | 4.35 |
450 | 451 | 5.949233 | ATGTTCGTGAACTTTGAAAAAGC | 57.051 | 34.783 | 13.40 | 0.00 | 41.67 | 3.51 |
523 | 524 | 4.496673 | CCCAAAGTTCACGAAATCACGAAA | 60.497 | 41.667 | 0.00 | 0.00 | 37.03 | 3.46 |
526 | 527 | 2.350388 | CCCCAAAGTTCACGAAATCACG | 60.350 | 50.000 | 0.00 | 0.00 | 39.31 | 4.35 |
535 | 536 | 5.993748 | TCATATTTTCCCCCAAAGTTCAC | 57.006 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
593 | 596 | 4.134563 | ACACTAACAAAAAGGTCTGCGAT | 58.865 | 39.130 | 0.00 | 0.00 | 0.00 | 4.58 |
598 | 601 | 6.320418 | CCCAAAGTACACTAACAAAAAGGTCT | 59.680 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
602 | 605 | 6.702716 | TCCCCAAAGTACACTAACAAAAAG | 57.297 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
608 | 611 | 5.010213 | TGCAAATTCCCCAAAGTACACTAAC | 59.990 | 40.000 | 0.00 | 0.00 | 0.00 | 2.34 |
617 | 623 | 6.638096 | AAAAATCTTGCAAATTCCCCAAAG | 57.362 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
640 | 646 | 7.854337 | AGTATTATGGAACGAAGGGAGTAAAA | 58.146 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
669 | 675 | 9.748100 | AAAAATGTTAAGTTGTAAAAAGTTGCG | 57.252 | 25.926 | 0.00 | 0.00 | 0.00 | 4.85 |
735 | 747 | 3.037549 | TGTGAGCCCATTTGAGGTTTTT | 58.962 | 40.909 | 0.00 | 0.00 | 0.00 | 1.94 |
736 | 748 | 2.365293 | GTGTGAGCCCATTTGAGGTTTT | 59.635 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
740 | 752 | 0.251297 | TGGTGTGAGCCCATTTGAGG | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
778 | 797 | 3.342627 | CGAGCCGTGTTTTGCCGA | 61.343 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
808 | 839 | 2.815647 | GGGAGAACGGCAGCGAAG | 60.816 | 66.667 | 0.00 | 0.00 | 0.00 | 3.79 |
1027 | 1059 | 1.068741 | GGCTACTTACATGGAGGACGG | 59.931 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
1045 | 1077 | 2.566724 | TGATTTGATTTGAGGTTGGGGC | 59.433 | 45.455 | 0.00 | 0.00 | 0.00 | 5.80 |
1046 | 1078 | 4.824289 | CTTGATTTGATTTGAGGTTGGGG | 58.176 | 43.478 | 0.00 | 0.00 | 0.00 | 4.96 |
1047 | 1079 | 4.020839 | AGCTTGATTTGATTTGAGGTTGGG | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 4.12 |
1048 | 1080 | 5.143376 | AGCTTGATTTGATTTGAGGTTGG | 57.857 | 39.130 | 0.00 | 0.00 | 0.00 | 3.77 |
1049 | 1081 | 5.166398 | GGAGCTTGATTTGATTTGAGGTTG | 58.834 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
1050 | 1082 | 4.221482 | GGGAGCTTGATTTGATTTGAGGTT | 59.779 | 41.667 | 0.00 | 0.00 | 0.00 | 3.50 |
1051 | 1083 | 3.766051 | GGGAGCTTGATTTGATTTGAGGT | 59.234 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
1063 | 1099 | 1.578215 | AGGTAGAGAGGGGAGCTTGAT | 59.422 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
1101 | 1137 | 2.821307 | GCATCTGCGAAGAAAAGGAG | 57.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1251 | 1295 | 3.083349 | CCCCACGATCCTGCCTGA | 61.083 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1277 | 1321 | 9.780186 | ATCTTTACACTTAAGTTTGCTTAGAGT | 57.220 | 29.630 | 5.07 | 0.04 | 38.31 | 3.24 |
1279 | 1323 | 9.772973 | TCATCTTTACACTTAAGTTTGCTTAGA | 57.227 | 29.630 | 5.07 | 5.08 | 38.31 | 2.10 |
1283 | 1327 | 7.173390 | GGACTCATCTTTACACTTAAGTTTGCT | 59.827 | 37.037 | 5.07 | 0.00 | 0.00 | 3.91 |
1333 | 1377 | 1.103398 | AGCATATTGCCGGCTTGACC | 61.103 | 55.000 | 29.70 | 11.53 | 46.52 | 4.02 |
1345 | 1389 | 7.566569 | CCATTCCTGATCTATCTCAGCATATT | 58.433 | 38.462 | 0.00 | 0.00 | 41.12 | 1.28 |
1349 | 1393 | 3.007723 | GCCATTCCTGATCTATCTCAGCA | 59.992 | 47.826 | 0.00 | 0.00 | 41.12 | 4.41 |
1355 | 1399 | 4.042684 | AGAAAGGGCCATTCCTGATCTATC | 59.957 | 45.833 | 17.34 | 0.00 | 37.20 | 2.08 |
1371 | 1415 | 1.351076 | ATGGGCCAACAAAGAAAGGG | 58.649 | 50.000 | 11.89 | 0.00 | 0.00 | 3.95 |
1426 | 1475 | 5.008217 | CCGTTTCCACATTCAGTTTGTCTAA | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1427 | 1476 | 4.513692 | CCGTTTCCACATTCAGTTTGTCTA | 59.486 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
1428 | 1477 | 3.315191 | CCGTTTCCACATTCAGTTTGTCT | 59.685 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1429 | 1478 | 3.628017 | CCGTTTCCACATTCAGTTTGTC | 58.372 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
1430 | 1479 | 2.223711 | GCCGTTTCCACATTCAGTTTGT | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
1431 | 1480 | 2.223688 | TGCCGTTTCCACATTCAGTTTG | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 2.93 |
1432 | 1481 | 2.028130 | TGCCGTTTCCACATTCAGTTT | 58.972 | 42.857 | 0.00 | 0.00 | 0.00 | 2.66 |
1433 | 1482 | 1.336755 | GTGCCGTTTCCACATTCAGTT | 59.663 | 47.619 | 0.00 | 0.00 | 33.50 | 3.16 |
1434 | 1483 | 0.951558 | GTGCCGTTTCCACATTCAGT | 59.048 | 50.000 | 0.00 | 0.00 | 33.50 | 3.41 |
1435 | 1484 | 0.240945 | GGTGCCGTTTCCACATTCAG | 59.759 | 55.000 | 0.00 | 0.00 | 34.94 | 3.02 |
1436 | 1485 | 0.466372 | TGGTGCCGTTTCCACATTCA | 60.466 | 50.000 | 0.00 | 0.00 | 34.94 | 2.57 |
1437 | 1486 | 2.336341 | TGGTGCCGTTTCCACATTC | 58.664 | 52.632 | 0.00 | 0.00 | 34.94 | 2.67 |
1438 | 1487 | 4.589046 | TGGTGCCGTTTCCACATT | 57.411 | 50.000 | 0.00 | 0.00 | 34.94 | 2.71 |
1442 | 1491 | 1.883275 | CTATTTGTGGTGCCGTTTCCA | 59.117 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
1443 | 1492 | 1.402325 | GCTATTTGTGGTGCCGTTTCC | 60.402 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
1444 | 1493 | 1.539827 | AGCTATTTGTGGTGCCGTTTC | 59.460 | 47.619 | 0.00 | 0.00 | 0.00 | 2.78 |
1445 | 1494 | 1.616159 | AGCTATTTGTGGTGCCGTTT | 58.384 | 45.000 | 0.00 | 0.00 | 0.00 | 3.60 |
1449 | 1498 | 3.756434 | TGTTAGAAGCTATTTGTGGTGCC | 59.244 | 43.478 | 0.00 | 0.00 | 0.00 | 5.01 |
1469 | 1518 | 6.147821 | GTGAAGTATCGGCAATATAGCATTGT | 59.852 | 38.462 | 0.00 | 0.00 | 35.83 | 2.71 |
1477 | 1526 | 5.930135 | AGGAAAGTGAAGTATCGGCAATAT | 58.070 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
1478 | 1527 | 5.128827 | AGAGGAAAGTGAAGTATCGGCAATA | 59.871 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
1492 | 1541 | 6.974965 | AGCATTAACAAGAAAGAGGAAAGTG | 58.025 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1530 | 1579 | 9.672086 | CGTCTTCCAAACATTAACAAGAATTTA | 57.328 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
1532 | 1581 | 6.640907 | GCGTCTTCCAAACATTAACAAGAATT | 59.359 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
1604 | 1654 | 3.121611 | CCACAAAATGTGCAAATAGCGTG | 59.878 | 43.478 | 4.98 | 0.00 | 46.51 | 5.34 |
1606 | 1656 | 2.667481 | CCCACAAAATGTGCAAATAGCG | 59.333 | 45.455 | 4.98 | 0.00 | 46.51 | 4.26 |
1620 | 1670 | 1.404843 | GGTGCCACTTTACCCACAAA | 58.595 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1637 | 1687 | 6.673154 | AATTTTTAAGCGCTAATCTACGGT | 57.327 | 33.333 | 12.05 | 0.00 | 42.60 | 4.83 |
1642 | 1692 | 9.289782 | AGGATGATAATTTTTAAGCGCTAATCT | 57.710 | 29.630 | 12.05 | 0.00 | 0.00 | 2.40 |
1667 | 1729 | 0.983378 | AGTGGCCCCCTAGCAAGTAG | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1679 | 1741 | 1.279271 | AGACAGTACAATCAGTGGCCC | 59.721 | 52.381 | 0.00 | 0.00 | 0.00 | 5.80 |
1765 | 1827 | 2.746904 | CACATGACGAACAATGGCCTAA | 59.253 | 45.455 | 3.32 | 0.00 | 0.00 | 2.69 |
1798 | 1873 | 7.936496 | TTATGCTTCATGAACAGGTCAATAA | 57.064 | 32.000 | 3.38 | 1.00 | 40.50 | 1.40 |
1853 | 1928 | 8.743085 | AACATCATTAGATCATTAGTGCTTGT | 57.257 | 30.769 | 0.00 | 0.00 | 30.20 | 3.16 |
1873 | 1955 | 3.307674 | TGTTCGCTGCAATCAAAACATC | 58.692 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
2046 | 2128 | 5.634859 | GCTCTGGAAATGGTGTATTTGTTTG | 59.365 | 40.000 | 0.00 | 0.00 | 39.06 | 2.93 |
2050 | 2132 | 5.393461 | GGAAGCTCTGGAAATGGTGTATTTG | 60.393 | 44.000 | 0.00 | 0.00 | 39.06 | 2.32 |
2051 | 2133 | 4.706962 | GGAAGCTCTGGAAATGGTGTATTT | 59.293 | 41.667 | 0.00 | 0.00 | 41.59 | 1.40 |
2052 | 2134 | 4.273318 | GGAAGCTCTGGAAATGGTGTATT | 58.727 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
2053 | 2135 | 3.372025 | GGGAAGCTCTGGAAATGGTGTAT | 60.372 | 47.826 | 0.00 | 0.00 | 0.00 | 2.29 |
2054 | 2136 | 2.026262 | GGGAAGCTCTGGAAATGGTGTA | 60.026 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2055 | 2137 | 1.272147 | GGGAAGCTCTGGAAATGGTGT | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
2056 | 2138 | 1.272092 | TGGGAAGCTCTGGAAATGGTG | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
2057 | 2139 | 1.075601 | TGGGAAGCTCTGGAAATGGT | 58.924 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2058 | 2140 | 1.467920 | GTGGGAAGCTCTGGAAATGG | 58.532 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2059 | 2141 | 1.005215 | AGGTGGGAAGCTCTGGAAATG | 59.995 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
2089 | 2171 | 5.221087 | CCACACGTGTTTAATGGTTTAACCT | 60.221 | 40.000 | 20.79 | 0.00 | 39.58 | 3.50 |
2116 | 2198 | 1.541233 | CCAGCCGAGATAATGTGGGAC | 60.541 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
2129 | 2211 | 2.422803 | CCCATTCTTTTATCCCAGCCGA | 60.423 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2130 | 2212 | 1.956477 | CCCATTCTTTTATCCCAGCCG | 59.044 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
2147 | 2237 | 7.844779 | AGATGTTACTATTACTTTCTCCTCCCA | 59.155 | 37.037 | 0.00 | 0.00 | 0.00 | 4.37 |
2163 | 2253 | 7.124573 | ACATGTGCATTCCTAGATGTTACTA | 57.875 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2167 | 2257 | 7.557358 | TGATTAACATGTGCATTCCTAGATGTT | 59.443 | 33.333 | 0.00 | 0.00 | 37.66 | 2.71 |
2206 | 2296 | 1.564348 | GATTGGGTCCCACTACACCAT | 59.436 | 52.381 | 11.24 | 0.00 | 33.91 | 3.55 |
2209 | 2299 | 2.026262 | ACATGATTGGGTCCCACTACAC | 60.026 | 50.000 | 11.24 | 1.15 | 30.78 | 2.90 |
2211 | 2301 | 3.016736 | CAACATGATTGGGTCCCACTAC | 58.983 | 50.000 | 11.24 | 5.66 | 30.78 | 2.73 |
2259 | 2349 | 4.630644 | TGCTCTGAAGAAATGAAGACCT | 57.369 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
2261 | 2351 | 6.551385 | TTCTTGCTCTGAAGAAATGAAGAC | 57.449 | 37.500 | 0.00 | 0.00 | 38.69 | 3.01 |
2267 | 2357 | 3.757493 | CCTGCTTCTTGCTCTGAAGAAAT | 59.243 | 43.478 | 14.73 | 0.00 | 40.59 | 2.17 |
2273 | 2363 | 0.036577 | GCTCCTGCTTCTTGCTCTGA | 60.037 | 55.000 | 0.00 | 0.00 | 43.37 | 3.27 |
2330 | 2420 | 3.126831 | GCTGGTTGAGTCCATTCTATCG | 58.873 | 50.000 | 0.00 | 0.00 | 36.84 | 2.92 |
2335 | 2425 | 2.911484 | CTAGGCTGGTTGAGTCCATTC | 58.089 | 52.381 | 0.00 | 0.00 | 36.84 | 2.67 |
2337 | 2427 | 0.543749 | GCTAGGCTGGTTGAGTCCAT | 59.456 | 55.000 | 0.00 | 0.00 | 36.84 | 3.41 |
2373 | 2463 | 1.202020 | CGTTTGCCGTGATGTGTATGG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
2376 | 2466 | 0.880718 | TGCGTTTGCCGTGATGTGTA | 60.881 | 50.000 | 0.00 | 0.00 | 41.78 | 2.90 |
2386 | 2476 | 3.127352 | TTCGGGTGTTGCGTTTGCC | 62.127 | 57.895 | 0.00 | 0.00 | 41.78 | 4.52 |
2401 | 2491 | 1.269517 | CCATTGGTTTGTGGGTGTTCG | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
2431 | 2521 | 0.034337 | GGTGTGTTCTTCTGGCCGTA | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2444 | 2534 | 2.771089 | CAGAGTTGCAGTATGGTGTGT | 58.229 | 47.619 | 0.00 | 0.00 | 35.86 | 3.72 |
2492 | 2582 | 0.181350 | CTCAACAGGGGCATAGGGTC | 59.819 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2517 | 2607 | 0.326264 | GGGCAGTCACACTGGATCTT | 59.674 | 55.000 | 5.82 | 0.00 | 46.01 | 2.40 |
2545 | 2635 | 2.668632 | GGTGGAATCCCGTGCTCA | 59.331 | 61.111 | 0.00 | 0.00 | 34.29 | 4.26 |
2592 | 2682 | 7.385478 | AGAGTTTCTTTCCTCGACACTTTATTC | 59.615 | 37.037 | 0.00 | 0.00 | 32.88 | 1.75 |
2670 | 2760 | 8.063153 | TGAGACTCCCCTGTTAAGTGTATAATA | 58.937 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
2673 | 2763 | 5.834460 | TGAGACTCCCCTGTTAAGTGTATA | 58.166 | 41.667 | 0.00 | 0.00 | 0.00 | 1.47 |
2675 | 2765 | 4.122337 | TGAGACTCCCCTGTTAAGTGTA | 57.878 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2676 | 2766 | 2.972348 | TGAGACTCCCCTGTTAAGTGT | 58.028 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
2677 | 2767 | 4.351874 | TTTGAGACTCCCCTGTTAAGTG | 57.648 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2678 | 2768 | 5.584551 | ATTTTGAGACTCCCCTGTTAAGT | 57.415 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
2679 | 2769 | 9.853177 | ATAATATTTTGAGACTCCCCTGTTAAG | 57.147 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
2686 | 2853 | 9.274206 | GTTCAGTATAATATTTTGAGACTCCCC | 57.726 | 37.037 | 0.00 | 0.00 | 0.00 | 4.81 |
2880 | 3049 | 3.743521 | TCTTCTTCAAGTGGTGTGGATG | 58.256 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2888 | 3057 | 5.689068 | GCACAATTTCTTCTTCTTCAAGTGG | 59.311 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2911 | 3080 | 1.488393 | AGGAGCACTAATTCCTCAGGC | 59.512 | 52.381 | 0.00 | 0.00 | 39.65 | 4.85 |
3056 | 3225 | 3.769739 | AATCACTAACACTGCAGGACA | 57.230 | 42.857 | 19.93 | 0.00 | 0.00 | 4.02 |
3380 | 3551 | 1.472480 | GTTGCTCGTGCCATACCAATT | 59.528 | 47.619 | 7.05 | 0.00 | 38.71 | 2.32 |
3392 | 3563 | 1.070758 | ACATGGTCTGAAGTTGCTCGT | 59.929 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
3395 | 3566 | 2.645838 | ACACATGGTCTGAAGTTGCT | 57.354 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3412 | 3583 | 4.320861 | CGTCCCAAATTGTAGCATTGAACA | 60.321 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
3428 | 3599 | 0.245539 | GATCGACAAGGACGTCCCAA | 59.754 | 55.000 | 30.82 | 10.51 | 37.41 | 4.12 |
3468 | 3639 | 4.943705 | AGACACAAAGCAGAAAAGTCTTCA | 59.056 | 37.500 | 0.00 | 0.00 | 31.38 | 3.02 |
3548 | 3719 | 2.507471 | AGACCTTGACCCTGGAATGATC | 59.493 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
3666 | 3837 | 1.225983 | CCTGTGTGTTGTGTGGGGA | 59.774 | 57.895 | 0.00 | 0.00 | 0.00 | 4.81 |
3708 | 3879 | 6.478512 | TTAAACAGGACCTGCAAATCTTTT | 57.521 | 33.333 | 21.95 | 14.08 | 34.37 | 2.27 |
3709 | 3880 | 6.295292 | GGATTAAACAGGACCTGCAAATCTTT | 60.295 | 38.462 | 26.92 | 19.58 | 34.37 | 2.52 |
3751 | 3922 | 8.505246 | TGTATACCCAGGAATACAGTTCTAGTA | 58.495 | 37.037 | 9.48 | 0.00 | 34.47 | 1.82 |
3752 | 3923 | 7.287235 | GTGTATACCCAGGAATACAGTTCTAGT | 59.713 | 40.741 | 12.59 | 0.00 | 38.81 | 2.57 |
3753 | 3924 | 7.287005 | TGTGTATACCCAGGAATACAGTTCTAG | 59.713 | 40.741 | 12.59 | 0.00 | 38.81 | 2.43 |
3826 | 3997 | 4.437682 | TGAACAGAACATCCACTTTCCT | 57.562 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
3942 | 4113 | 2.171659 | TGTAGAAGTCCACCACTGCAAA | 59.828 | 45.455 | 0.00 | 0.00 | 34.56 | 3.68 |
3983 | 4154 | 2.534011 | TTGATGCCCTGGGGGTCA | 60.534 | 61.111 | 16.03 | 4.23 | 46.51 | 4.02 |
4057 | 4231 | 2.388232 | GCGTCGGTCTTGCGGAAAT | 61.388 | 57.895 | 0.00 | 0.00 | 0.00 | 2.17 |
4116 | 4290 | 0.251787 | TACACAGCTCAGCTCCTGGA | 60.252 | 55.000 | 0.00 | 0.00 | 36.40 | 3.86 |
4171 | 4352 | 2.758327 | AGCCGGTCGCACCAGATA | 60.758 | 61.111 | 1.90 | 0.00 | 38.47 | 1.98 |
4192 | 4373 | 0.401395 | AACAGGACTTGGGACTGGGA | 60.401 | 55.000 | 0.00 | 0.00 | 36.57 | 4.37 |
4193 | 4374 | 0.250901 | CAACAGGACTTGGGACTGGG | 60.251 | 60.000 | 0.00 | 0.00 | 36.57 | 4.45 |
4194 | 4375 | 0.250901 | CCAACAGGACTTGGGACTGG | 60.251 | 60.000 | 0.00 | 0.00 | 37.62 | 4.00 |
4195 | 4376 | 0.474184 | ACCAACAGGACTTGGGACTG | 59.526 | 55.000 | 3.12 | 0.00 | 44.58 | 3.51 |
4196 | 4377 | 0.765510 | GACCAACAGGACTTGGGACT | 59.234 | 55.000 | 3.12 | 0.00 | 44.58 | 3.85 |
4254 | 4436 | 0.528470 | GCTGTCTCCTTCGCAGTACT | 59.472 | 55.000 | 0.00 | 0.00 | 33.18 | 2.73 |
4271 | 4453 | 4.748102 | CGTATAATAATGTTCGGTGTGGCT | 59.252 | 41.667 | 0.00 | 0.00 | 0.00 | 4.75 |
4294 | 4476 | 7.450787 | AGAACAATTTCTCGACTTCCACAGTC | 61.451 | 42.308 | 0.00 | 0.00 | 40.59 | 3.51 |
4295 | 4477 | 4.073293 | ACAATTTCTCGACTTCCACAGT | 57.927 | 40.909 | 0.00 | 0.00 | 39.07 | 3.55 |
4296 | 4478 | 4.752101 | AGAACAATTTCTCGACTTCCACAG | 59.248 | 41.667 | 0.00 | 0.00 | 37.55 | 3.66 |
4297 | 4479 | 4.703897 | AGAACAATTTCTCGACTTCCACA | 58.296 | 39.130 | 0.00 | 0.00 | 37.55 | 4.17 |
4307 | 4489 | 7.869429 | ACATGTTGATTGGAAGAACAATTTCTC | 59.131 | 33.333 | 0.00 | 0.00 | 41.56 | 2.87 |
4316 | 4498 | 4.081406 | CCTGGACATGTTGATTGGAAGAA | 58.919 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
4411 | 4597 | 1.525784 | CGCTGCTCGAAAAATCTCACG | 60.526 | 52.381 | 0.00 | 0.00 | 41.67 | 4.35 |
4464 | 4662 | 0.750546 | CAGTGGATGGTGATGGCCAG | 60.751 | 60.000 | 13.05 | 0.00 | 42.47 | 4.85 |
4474 | 4672 | 0.907486 | TCTCCAGCTTCAGTGGATGG | 59.093 | 55.000 | 0.00 | 0.00 | 43.33 | 3.51 |
4512 | 4710 | 1.431036 | GCCAGCGAGATGAAAAGCC | 59.569 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
4642 | 4846 | 1.356124 | AGAGGACAGCCACAAGATGT | 58.644 | 50.000 | 0.00 | 0.00 | 36.29 | 3.06 |
4643 | 4847 | 2.354259 | GAAGAGGACAGCCACAAGATG | 58.646 | 52.381 | 0.00 | 0.00 | 36.29 | 2.90 |
4655 | 4859 | 2.939103 | CAACGGATGAATGGAAGAGGAC | 59.061 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4659 | 4863 | 6.537301 | GTGTAATACAACGGATGAATGGAAGA | 59.463 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
4660 | 4864 | 6.509517 | CGTGTAATACAACGGATGAATGGAAG | 60.510 | 42.308 | 0.00 | 0.00 | 0.00 | 3.46 |
4664 | 4868 | 5.712217 | ACGTGTAATACAACGGATGAATG | 57.288 | 39.130 | 15.61 | 0.00 | 30.74 | 2.67 |
4665 | 4869 | 6.567050 | AGTACGTGTAATACAACGGATGAAT | 58.433 | 36.000 | 15.61 | 1.98 | 30.74 | 2.57 |
4666 | 4870 | 5.953183 | AGTACGTGTAATACAACGGATGAA | 58.047 | 37.500 | 15.61 | 0.00 | 30.74 | 2.57 |
4667 | 4871 | 5.565592 | AGTACGTGTAATACAACGGATGA | 57.434 | 39.130 | 15.61 | 1.52 | 30.74 | 2.92 |
4668 | 4872 | 4.435554 | CGAGTACGTGTAATACAACGGATG | 59.564 | 45.833 | 15.61 | 0.00 | 34.56 | 3.51 |
4669 | 4873 | 4.591202 | CGAGTACGTGTAATACAACGGAT | 58.409 | 43.478 | 15.61 | 5.32 | 34.56 | 4.18 |
4670 | 4874 | 3.727673 | GCGAGTACGTGTAATACAACGGA | 60.728 | 47.826 | 15.61 | 7.83 | 41.98 | 4.69 |
4672 | 4876 | 3.162831 | TGCGAGTACGTGTAATACAACG | 58.837 | 45.455 | 0.00 | 11.66 | 41.98 | 4.10 |
4674 | 4878 | 4.683501 | TCTGCGAGTACGTGTAATACAA | 57.316 | 40.909 | 0.00 | 0.00 | 41.98 | 2.41 |
4675 | 4879 | 4.551410 | CGATCTGCGAGTACGTGTAATACA | 60.551 | 45.833 | 0.00 | 0.00 | 44.57 | 2.29 |
4677 | 4881 | 3.059393 | CCGATCTGCGAGTACGTGTAATA | 60.059 | 47.826 | 0.00 | 0.00 | 44.57 | 0.98 |
4678 | 4882 | 2.286831 | CCGATCTGCGAGTACGTGTAAT | 60.287 | 50.000 | 0.00 | 0.00 | 44.57 | 1.89 |
4679 | 4883 | 1.063027 | CCGATCTGCGAGTACGTGTAA | 59.937 | 52.381 | 0.00 | 0.00 | 44.57 | 2.41 |
4681 | 4885 | 1.303799 | ACCGATCTGCGAGTACGTGT | 61.304 | 55.000 | 0.00 | 0.00 | 44.57 | 4.49 |
4683 | 4887 | 0.098376 | GAACCGATCTGCGAGTACGT | 59.902 | 55.000 | 0.00 | 0.00 | 44.57 | 3.57 |
4685 | 4889 | 0.454600 | TGGAACCGATCTGCGAGTAC | 59.545 | 55.000 | 0.00 | 0.00 | 44.57 | 2.73 |
4686 | 4890 | 0.738975 | CTGGAACCGATCTGCGAGTA | 59.261 | 55.000 | 0.00 | 0.00 | 44.57 | 2.59 |
4687 | 4891 | 0.965866 | TCTGGAACCGATCTGCGAGT | 60.966 | 55.000 | 0.00 | 0.00 | 44.57 | 4.18 |
4688 | 4892 | 0.173481 | TTCTGGAACCGATCTGCGAG | 59.827 | 55.000 | 0.00 | 0.00 | 44.57 | 5.03 |
4689 | 4893 | 0.173481 | CTTCTGGAACCGATCTGCGA | 59.827 | 55.000 | 0.00 | 0.00 | 44.57 | 5.10 |
4694 | 4914 | 0.108329 | TTCGCCTTCTGGAACCGATC | 60.108 | 55.000 | 0.00 | 0.00 | 34.57 | 3.69 |
4696 | 4916 | 1.136305 | CTATTCGCCTTCTGGAACCGA | 59.864 | 52.381 | 0.00 | 0.00 | 34.57 | 4.69 |
4699 | 4919 | 1.666189 | GCACTATTCGCCTTCTGGAAC | 59.334 | 52.381 | 0.00 | 0.00 | 34.57 | 3.62 |
4708 | 4928 | 2.225068 | TAGCTTCAGCACTATTCGCC | 57.775 | 50.000 | 0.75 | 0.00 | 45.16 | 5.54 |
4719 | 4939 | 0.537188 | ACCACGGACCATAGCTTCAG | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4722 | 4942 | 0.690762 | ACAACCACGGACCATAGCTT | 59.309 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
4725 | 4945 | 2.007049 | GCAGACAACCACGGACCATAG | 61.007 | 57.143 | 0.00 | 0.00 | 0.00 | 2.23 |
4730 | 4955 | 3.330275 | GTGCAGACAACCACGGAC | 58.670 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
4781 | 5019 | 2.487762 | TGCATAGAAAAACAAGCTCCCG | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 5.14 |
4809 | 5050 | 2.975851 | GACAACGTACGTACTTGACTGG | 59.024 | 50.000 | 28.68 | 15.24 | 0.00 | 4.00 |
4836 | 5077 | 2.605299 | GCCATGGCAGGATTCCCT | 59.395 | 61.111 | 32.08 | 0.00 | 45.74 | 4.20 |
4916 | 5163 | 4.587189 | CGCCCGGTCGATCTTCCC | 62.587 | 72.222 | 0.00 | 0.00 | 0.00 | 3.97 |
4932 | 5179 | 2.394545 | TACCTATCACGATTCACGCG | 57.605 | 50.000 | 3.53 | 3.53 | 46.94 | 6.01 |
4951 | 5199 | 0.251033 | GGTCGGGGTTTGTTAGGCTT | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4957 | 5205 | 0.251165 | CTGGATGGTCGGGGTTTGTT | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.