Multiple sequence alignment - TraesCS1B01G311900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G311900 chr1B 100.000 5733 0 0 1 5733 535550860 535545128 0.000000e+00 10587.0
1 TraesCS1B01G311900 chr1B 89.796 147 15 0 3115 3261 535547671 535547525 7.580000e-44 189.0
2 TraesCS1B01G311900 chr1B 89.796 147 15 0 3190 3336 535547746 535547600 7.580000e-44 189.0
3 TraesCS1B01G311900 chr1D 91.692 3635 227 29 1548 5135 399238952 399235346 0.000000e+00 4970.0
4 TraesCS1B01G311900 chr1D 92.723 426 19 6 5310 5731 399235291 399234874 6.350000e-169 604.0
5 TraesCS1B01G311900 chr1D 85.560 554 43 19 989 1541 399239554 399239037 3.910000e-151 545.0
6 TraesCS1B01G311900 chr1D 92.509 267 9 7 675 937 399239920 399239661 7.020000e-99 372.0
7 TraesCS1B01G311900 chr1D 83.333 438 38 17 1 437 399243547 399243144 7.020000e-99 372.0
8 TraesCS1B01G311900 chr1D 93.370 181 2 7 479 652 399240351 399240174 5.700000e-65 259.0
9 TraesCS1B01G311900 chr1A 93.867 3310 151 19 1548 4845 496074536 496071267 0.000000e+00 4940.0
10 TraesCS1B01G311900 chr1A 83.814 902 76 33 512 1384 496075598 496074738 0.000000e+00 793.0
11 TraesCS1B01G311900 chr1A 83.925 535 36 25 5221 5731 496070954 496070446 3.130000e-127 466.0
12 TraesCS1B01G311900 chr1A 91.852 135 5 4 1429 1559 496074729 496074597 3.530000e-42 183.0
13 TraesCS1B01G311900 chr1A 78.992 238 16 15 4936 5139 496071245 496071008 1.300000e-26 132.0
14 TraesCS1B01G311900 chr3A 92.000 75 6 0 1721 1795 655539764 655539838 7.860000e-19 106.0
15 TraesCS1B01G311900 chr7D 90.000 80 8 0 1717 1796 17264845 17264766 2.830000e-18 104.0
16 TraesCS1B01G311900 chr7D 91.304 69 6 0 225 293 614540979 614541047 1.700000e-15 95.3
17 TraesCS1B01G311900 chr4A 91.549 71 6 0 1726 1796 503327099 503327029 1.310000e-16 99.0
18 TraesCS1B01G311900 chr4A 100.000 29 0 0 265 293 543377057 543377085 3.000000e-03 54.7
19 TraesCS1B01G311900 chr4D 90.141 71 7 0 1726 1796 91094265 91094195 6.120000e-15 93.5
20 TraesCS1B01G311900 chr4D 86.667 60 4 3 265 321 53750126 53750068 4.800000e-06 63.9
21 TraesCS1B01G311900 chr7B 87.500 80 6 2 218 293 706858548 706858627 7.910000e-14 89.8
22 TraesCS1B01G311900 chr7B 83.333 84 14 0 1710 1793 324379709 324379792 1.710000e-10 78.7
23 TraesCS1B01G311900 chr6B 85.333 75 11 0 1715 1789 332412946 332412872 1.710000e-10 78.7
24 TraesCS1B01G311900 chr2B 84.211 76 10 2 1715 1789 52408850 52408776 7.970000e-09 73.1
25 TraesCS1B01G311900 chr7A 97.368 38 1 0 256 293 15962103 15962066 1.330000e-06 65.8
26 TraesCS1B01G311900 chr4B 86.000 50 7 0 265 314 78602678 78602629 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G311900 chr1B 535545128 535550860 5732 True 3655.0 10587 93.197333 1 5733 3 chr1B.!!$R1 5732
1 TraesCS1B01G311900 chr1D 399234874 399243547 8673 True 1187.0 4970 89.864500 1 5731 6 chr1D.!!$R1 5730
2 TraesCS1B01G311900 chr1A 496070446 496075598 5152 True 1302.8 4940 86.490000 512 5731 5 chr1A.!!$R1 5219

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
39 40 0.332972 AGTGAGGATTTTGGCTCCCC 59.667 55.0 0.0 0.0 32.89 4.81 F
1356 4444 0.037326 TTGTAGGCCGTCTGCTTCAG 60.037 55.0 0.0 0.0 40.92 3.02 F
3128 6304 0.032540 CGTCATCGGCTCCATCATCA 59.967 55.0 0.0 0.0 0.00 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1394 4485 0.109735 GCTCCGCACTTGCCTTTAAC 60.110 55.0 0.0 0.0 37.91 2.01 R
3188 6364 0.039617 GACGAGATGATGGAGCCGAG 60.040 60.0 0.0 0.0 0.00 4.63 R
5120 8353 0.029300 CACGCTTCCAACTTGTGTGG 59.971 55.0 0.0 0.0 38.20 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 0.332972 AGTGAGGATTTTGGCTCCCC 59.667 55.000 0.00 0.00 32.89 4.81
41 42 1.204786 TGAGGATTTTGGCTCCCCGA 61.205 55.000 0.00 0.00 32.89 5.14
42 43 0.464554 GAGGATTTTGGCTCCCCGAG 60.465 60.000 0.00 0.00 32.89 4.63
49 50 2.764128 GGCTCCCCGAGTCCATGA 60.764 66.667 0.00 0.00 31.39 3.07
58 59 2.235016 CCGAGTCCATGAAACCCAAAA 58.765 47.619 0.00 0.00 0.00 2.44
66 67 7.115414 AGTCCATGAAACCCAAAATTTTCAAA 58.885 30.769 0.00 0.00 43.20 2.69
145 146 6.025749 ACACATACATATGGATGTCTACCG 57.974 41.667 27.57 18.99 43.01 4.02
152 153 5.246203 ACATATGGATGTCTACCGCATTACT 59.754 40.000 7.80 0.00 43.01 2.24
157 158 5.069914 TGGATGTCTACCGCATTACTGTAAT 59.930 40.000 7.22 7.22 0.00 1.89
216 217 7.678947 AAGGCAAAGTCATATACTATGATGC 57.321 36.000 10.58 10.58 37.50 3.91
217 218 6.772605 AGGCAAAGTCATATACTATGATGCA 58.227 36.000 16.77 0.00 37.50 3.96
218 219 7.400439 AGGCAAAGTCATATACTATGATGCAT 58.600 34.615 16.77 0.00 37.50 3.96
237 238 4.534168 GCATAGTGCATGTGCTAGAAATG 58.466 43.478 12.04 4.77 44.26 2.32
246 247 5.579511 GCATGTGCTAGAAATGCAAGATTTT 59.420 36.000 15.74 0.00 44.83 1.82
247 248 6.455113 GCATGTGCTAGAAATGCAAGATTTTG 60.455 38.462 15.74 0.00 44.83 2.44
251 252 5.921976 TGCTAGAAATGCAAGATTTTGTGTG 59.078 36.000 0.00 0.00 37.51 3.82
252 253 5.922544 GCTAGAAATGCAAGATTTTGTGTGT 59.077 36.000 0.00 0.00 36.65 3.72
302 303 7.218228 TCATGAAACTTTACATCAATGCACT 57.782 32.000 0.00 0.00 0.00 4.40
429 431 9.594936 TCTTCAAAAAGTAAATAAATCAGGGGA 57.405 29.630 0.00 0.00 33.95 4.81
453 649 5.240844 ACCCATAAGCAATTTCCGCTATAAC 59.759 40.000 0.00 0.00 39.29 1.89
455 651 6.071952 CCCATAAGCAATTTCCGCTATAACAT 60.072 38.462 0.00 0.00 39.29 2.71
461 3218 5.506317 GCAATTTCCGCTATAACATCAGCTT 60.506 40.000 0.00 0.00 35.57 3.74
470 3227 8.436200 CCGCTATAACATCAGCTTTATTTACTC 58.564 37.037 0.00 0.00 35.57 2.59
473 3230 9.220767 CTATAACATCAGCTTTATTTACTCCCC 57.779 37.037 0.00 0.00 0.00 4.81
474 3231 4.451900 ACATCAGCTTTATTTACTCCCCG 58.548 43.478 0.00 0.00 0.00 5.73
475 3232 2.914059 TCAGCTTTATTTACTCCCCGC 58.086 47.619 0.00 0.00 0.00 6.13
476 3233 2.237643 TCAGCTTTATTTACTCCCCGCA 59.762 45.455 0.00 0.00 0.00 5.69
477 3234 3.013921 CAGCTTTATTTACTCCCCGCAA 58.986 45.455 0.00 0.00 0.00 4.85
505 3262 2.391821 GATGCGTCGTTGACAGCG 59.608 61.111 5.21 5.21 35.86 5.18
630 3397 2.814341 CAGACGCAGCAGCAGAGG 60.814 66.667 0.82 0.00 42.27 3.69
652 3419 3.474034 GCTCACGCTCACGCTCAC 61.474 66.667 0.00 0.00 45.53 3.51
653 3420 3.168604 CTCACGCTCACGCTCACG 61.169 66.667 0.00 0.00 45.53 4.35
698 3703 2.601966 ATCTCCTCCCCGCGATCC 60.602 66.667 8.23 0.00 0.00 3.36
699 3704 4.916314 TCTCCTCCCCGCGATCCC 62.916 72.222 8.23 0.00 0.00 3.85
729 3734 0.942884 GCTCATCTCATCGCATCGCA 60.943 55.000 0.00 0.00 0.00 5.10
740 3745 1.445095 GCATCGCACATCCTCCTCT 59.555 57.895 0.00 0.00 0.00 3.69
1103 4188 3.370231 CCCGGGTTTTTGGGCGAG 61.370 66.667 14.18 0.00 38.90 5.03
1104 4189 2.596338 CCGGGTTTTTGGGCGAGT 60.596 61.111 0.00 0.00 0.00 4.18
1105 4190 2.642700 CGGGTTTTTGGGCGAGTG 59.357 61.111 0.00 0.00 0.00 3.51
1106 4191 1.894756 CGGGTTTTTGGGCGAGTGA 60.895 57.895 0.00 0.00 0.00 3.41
1111 4196 2.231235 GGTTTTTGGGCGAGTGAATCAT 59.769 45.455 0.00 0.00 0.00 2.45
1124 4209 2.413112 GTGAATCATCCGTCTGTGTGTG 59.587 50.000 0.00 0.00 0.00 3.82
1125 4210 1.394917 GAATCATCCGTCTGTGTGTGC 59.605 52.381 0.00 0.00 0.00 4.57
1143 4228 5.767665 TGTGTGCTCTTAAAAGCTGGAATTA 59.232 36.000 1.86 0.00 42.94 1.40
1166 4251 3.673746 TGATTAATGCAGCGTGCTTAC 57.326 42.857 10.54 0.00 45.31 2.34
1172 4257 1.736645 GCAGCGTGCTTACGAAGGA 60.737 57.895 3.78 0.00 40.96 3.36
1177 4262 2.094390 AGCGTGCTTACGAAGGATGTTA 60.094 45.455 3.78 0.00 38.05 2.41
1178 4263 2.281762 GCGTGCTTACGAAGGATGTTAG 59.718 50.000 3.78 0.00 38.05 2.34
1194 4282 7.168219 AGGATGTTAGACATTTTTCTGCACTA 58.832 34.615 0.00 0.00 39.27 2.74
1201 4289 5.532406 AGACATTTTTCTGCACTAGCTTCAA 59.468 36.000 0.00 0.00 42.74 2.69
1204 4292 6.865205 ACATTTTTCTGCACTAGCTTCAATTC 59.135 34.615 0.00 0.00 42.74 2.17
1205 4293 6.639632 TTTTTCTGCACTAGCTTCAATTCT 57.360 33.333 0.00 0.00 42.74 2.40
1206 4294 6.639632 TTTTCTGCACTAGCTTCAATTCTT 57.360 33.333 0.00 0.00 42.74 2.52
1215 4303 9.196552 GCACTAGCTTCAATTCTTTGTATTTTT 57.803 29.630 0.00 0.00 37.91 1.94
1230 4318 5.929278 TGTATTTTTGGTCGATTTGTACCG 58.071 37.500 0.00 0.00 38.70 4.02
1232 4320 2.547299 TTTGGTCGATTTGTACCGGT 57.453 45.000 13.98 13.98 38.70 5.28
1233 4321 2.547299 TTGGTCGATTTGTACCGGTT 57.453 45.000 15.04 0.00 38.70 4.44
1234 4322 3.674528 TTGGTCGATTTGTACCGGTTA 57.325 42.857 15.04 0.00 38.70 2.85
1235 4323 3.235157 TGGTCGATTTGTACCGGTTAG 57.765 47.619 15.04 0.00 38.70 2.34
1237 4325 2.166254 GGTCGATTTGTACCGGTTAGGA 59.834 50.000 15.04 0.00 45.00 2.94
1238 4326 3.181472 GGTCGATTTGTACCGGTTAGGAT 60.181 47.826 15.04 2.18 45.00 3.24
1239 4327 3.800506 GTCGATTTGTACCGGTTAGGATG 59.199 47.826 15.04 0.00 45.00 3.51
1240 4328 3.448301 TCGATTTGTACCGGTTAGGATGT 59.552 43.478 15.04 0.00 45.00 3.06
1241 4329 4.081531 TCGATTTGTACCGGTTAGGATGTT 60.082 41.667 15.04 0.00 45.00 2.71
1242 4330 5.126869 TCGATTTGTACCGGTTAGGATGTTA 59.873 40.000 15.04 0.00 45.00 2.41
1243 4331 5.811613 CGATTTGTACCGGTTAGGATGTTAA 59.188 40.000 15.04 0.00 45.00 2.01
1245 4333 5.743636 TTGTACCGGTTAGGATGTTAACT 57.256 39.130 15.04 0.00 45.00 2.24
1253 4341 6.264088 CGGTTAGGATGTTAACTCTGTACTC 58.736 44.000 7.22 0.00 34.65 2.59
1257 4345 6.767524 AGGATGTTAACTCTGTACTCTCTG 57.232 41.667 7.22 0.00 0.00 3.35
1271 4359 1.136695 CTCTCTGGCCTGAGTAAGCTG 59.863 57.143 31.71 16.02 35.68 4.24
1272 4360 1.189752 CTCTGGCCTGAGTAAGCTGA 58.810 55.000 27.00 0.00 0.00 4.26
1273 4361 1.761784 CTCTGGCCTGAGTAAGCTGAT 59.238 52.381 27.00 0.00 0.00 2.90
1274 4362 2.961741 CTCTGGCCTGAGTAAGCTGATA 59.038 50.000 27.00 0.00 0.00 2.15
1277 4365 4.063689 CTGGCCTGAGTAAGCTGATATTG 58.936 47.826 3.32 0.00 0.00 1.90
1293 4381 2.384933 ATTGGGGGTGCCATGTGTGT 62.385 55.000 0.00 0.00 0.00 3.72
1345 4433 4.157840 ACTTCGGATTTTCATTTGTAGGCC 59.842 41.667 0.00 0.00 0.00 5.19
1356 4444 0.037326 TTGTAGGCCGTCTGCTTCAG 60.037 55.000 0.00 0.00 40.92 3.02
1357 4445 1.185618 TGTAGGCCGTCTGCTTCAGT 61.186 55.000 0.00 0.00 40.92 3.41
1358 4446 0.815734 GTAGGCCGTCTGCTTCAGTA 59.184 55.000 0.00 0.00 40.92 2.74
1359 4447 1.103803 TAGGCCGTCTGCTTCAGTAG 58.896 55.000 0.00 0.00 40.92 2.57
1384 4475 3.889815 CTGTGGTGGATGTTGGATGTAT 58.110 45.455 0.00 0.00 0.00 2.29
1385 4476 3.619419 TGTGGTGGATGTTGGATGTATG 58.381 45.455 0.00 0.00 0.00 2.39
1386 4477 3.010027 TGTGGTGGATGTTGGATGTATGT 59.990 43.478 0.00 0.00 0.00 2.29
1387 4478 4.226168 TGTGGTGGATGTTGGATGTATGTA 59.774 41.667 0.00 0.00 0.00 2.29
1388 4479 5.189928 GTGGTGGATGTTGGATGTATGTAA 58.810 41.667 0.00 0.00 0.00 2.41
1390 4481 6.017109 GTGGTGGATGTTGGATGTATGTAATC 60.017 42.308 0.00 0.00 0.00 1.75
1391 4482 5.473504 GGTGGATGTTGGATGTATGTAATCC 59.526 44.000 0.00 0.00 43.44 3.01
1392 4483 6.299141 GTGGATGTTGGATGTATGTAATCCT 58.701 40.000 4.23 0.00 43.52 3.24
1393 4484 6.772716 GTGGATGTTGGATGTATGTAATCCTT 59.227 38.462 4.23 0.00 43.52 3.36
1394 4485 6.772233 TGGATGTTGGATGTATGTAATCCTTG 59.228 38.462 4.23 0.00 43.52 3.61
1395 4486 6.772716 GGATGTTGGATGTATGTAATCCTTGT 59.227 38.462 4.23 0.00 43.52 3.16
1396 4487 7.285401 GGATGTTGGATGTATGTAATCCTTGTT 59.715 37.037 4.23 0.00 43.52 2.83
1397 4488 9.337396 GATGTTGGATGTATGTAATCCTTGTTA 57.663 33.333 4.23 0.00 43.52 2.41
1398 4489 9.693739 ATGTTGGATGTATGTAATCCTTGTTAA 57.306 29.630 4.23 0.00 43.52 2.01
1399 4490 9.521841 TGTTGGATGTATGTAATCCTTGTTAAA 57.478 29.630 4.23 0.00 43.52 1.52
1409 4500 2.050477 CCTTGTTAAAGGCAAGTGCG 57.950 50.000 0.00 0.00 46.50 5.34
1410 4501 1.335872 CCTTGTTAAAGGCAAGTGCGG 60.336 52.381 0.00 0.00 46.50 5.69
1438 4529 3.383505 AGCGAAACTTAAAAGGCCAAGTT 59.616 39.130 12.02 12.02 44.72 2.66
1541 4632 6.870439 GGTGGAACGGAATGTATACCTAATAC 59.130 42.308 0.00 0.00 38.55 1.89
1542 4633 6.870439 GTGGAACGGAATGTATACCTAATACC 59.130 42.308 0.00 0.00 39.91 2.73
1543 4634 6.783977 TGGAACGGAATGTATACCTAATACCT 59.216 38.462 0.00 0.00 39.91 3.08
1544 4635 7.290714 TGGAACGGAATGTATACCTAATACCTT 59.709 37.037 0.00 0.00 39.91 3.50
1545 4636 8.152898 GGAACGGAATGTATACCTAATACCTTT 58.847 37.037 0.00 0.00 39.91 3.11
1577 4746 3.768757 CCAGGTCAATTTGGAGGCATTAA 59.231 43.478 0.00 0.00 36.55 1.40
1689 4858 7.869429 AGAATGATCATTGGTTTGTTTTCTGTC 59.131 33.333 25.37 5.32 0.00 3.51
1696 4865 5.021033 TGGTTTGTTTTCTGTCATTGCAT 57.979 34.783 0.00 0.00 0.00 3.96
1724 4898 7.928706 GTGCTATTCAGTAATACCTCTGTTCAT 59.071 37.037 0.00 0.00 33.89 2.57
1752 4926 2.693074 AGGACGTTTTGGCAGTTCAATT 59.307 40.909 0.00 0.00 0.00 2.32
1763 4937 6.079424 TGGCAGTTCAATTTAAACTACCAC 57.921 37.500 14.49 3.72 42.55 4.16
1805 4979 7.558444 TGAACAGAGGGTGTACTTATTTGTTTT 59.442 33.333 0.00 0.00 39.03 2.43
1846 5020 6.540189 GTCAGCATGTATTTCCACTCTTATGT 59.460 38.462 0.00 0.00 37.40 2.29
1847 5021 7.710907 GTCAGCATGTATTTCCACTCTTATGTA 59.289 37.037 0.00 0.00 37.40 2.29
1848 5022 8.432013 TCAGCATGTATTTCCACTCTTATGTAT 58.568 33.333 0.00 0.00 37.40 2.29
1849 5023 9.710900 CAGCATGTATTTCCACTCTTATGTATA 57.289 33.333 0.00 0.00 0.00 1.47
2101 5275 7.259088 ACTAGTCCAGGATATGTTTTTCTGT 57.741 36.000 0.00 0.00 0.00 3.41
2111 5285 7.977853 AGGATATGTTTTTCTGTGCAAATGATC 59.022 33.333 0.00 0.00 0.00 2.92
2115 5289 6.751157 TGTTTTTCTGTGCAAATGATCTCAT 58.249 32.000 0.00 0.00 38.41 2.90
2157 5331 6.370442 TGTTCTGTACAAATGGAATTCGGTAG 59.630 38.462 0.00 0.00 33.67 3.18
2159 5333 6.469410 TCTGTACAAATGGAATTCGGTAGTT 58.531 36.000 0.00 0.00 33.67 2.24
2199 5373 6.536224 GCCTAATTTTTCTATGTTGCATTGCT 59.464 34.615 10.49 0.00 0.00 3.91
2240 5414 7.855375 AGAACAGGATTGAATGTATCTTCTGA 58.145 34.615 0.00 0.00 0.00 3.27
2253 5427 5.583457 TGTATCTTCTGAAGACATGCATGTG 59.417 40.000 35.92 20.83 41.95 3.21
2257 5431 0.883153 TGAAGACATGCATGTGTGGC 59.117 50.000 35.92 25.34 41.95 5.01
2276 5450 7.445707 TGTGTGGCAAACAATTGTTATCTAGTA 59.554 33.333 23.53 6.15 41.57 1.82
2429 5605 1.168714 GACATTCTGCAGTTCCCACC 58.831 55.000 14.67 0.00 0.00 4.61
2513 5689 6.094603 GCAATAACAGGACATCAGTTCTCAAT 59.905 38.462 0.00 0.00 28.33 2.57
2640 5816 5.582665 GCAAGGTCATCTACTCCTGTTAAAG 59.417 44.000 0.00 0.00 0.00 1.85
2697 5873 6.706270 GTCTACTCCTGTGAAAACTCATCAAA 59.294 38.462 0.00 0.00 0.00 2.69
2712 5888 6.533730 ACTCATCAAACAACATCCAACTCTA 58.466 36.000 0.00 0.00 0.00 2.43
2780 5956 1.594862 CCATCGACTCCAAATTCTCGC 59.405 52.381 0.00 0.00 0.00 5.03
2844 6020 4.424711 GCCGCCCAAGTCCATCCA 62.425 66.667 0.00 0.00 0.00 3.41
2852 6028 3.844211 GCCCAAGTCCATCCATAGGTATA 59.156 47.826 0.00 0.00 0.00 1.47
2861 6037 5.104941 TCCATCCATAGGTATAATTCCTGCG 60.105 44.000 0.00 0.00 36.60 5.18
2930 6106 1.003580 TCCACCTCATTGTCTTCTGGC 59.996 52.381 0.00 0.00 0.00 4.85
2956 6132 0.389166 CCTTCAGTGAGTCGCTCCAC 60.389 60.000 2.39 0.00 0.00 4.02
2969 6145 0.596083 GCTCCACCTCACGATCATCG 60.596 60.000 5.22 5.22 46.93 3.84
3003 6179 2.743752 CCTGCAGTGCGTTCATCGG 61.744 63.158 13.81 0.00 40.26 4.18
3038 6214 0.237498 GTTCGCCTTCTTTTGGACGG 59.763 55.000 0.00 0.00 36.55 4.79
3051 6227 1.760192 TGGACGGACTTCTAGTAGCC 58.240 55.000 0.00 0.00 0.00 3.93
3089 6265 1.811679 GAACCGACCTGCAGCTAGC 60.812 63.158 8.66 6.62 45.96 3.42
3116 6292 0.716108 GAAGTTCAGCACCGTCATCG 59.284 55.000 0.00 0.00 0.00 3.84
3128 6304 0.032540 CGTCATCGGCTCCATCATCA 59.967 55.000 0.00 0.00 0.00 3.07
3131 6307 1.301244 ATCGGCTCCATCATCACGC 60.301 57.895 0.00 0.00 0.00 5.34
3188 6364 1.131126 CGCACACATGACATTCCTTCC 59.869 52.381 0.00 0.00 0.00 3.46
3198 6374 0.471617 CATTCCTTCCTCGGCTCCAT 59.528 55.000 0.00 0.00 0.00 3.41
3212 6388 1.863267 CTCCATCATCTCGTCCAAGC 58.137 55.000 0.00 0.00 0.00 4.01
3266 6442 2.771089 CCACATGATACCCCTTCATCG 58.229 52.381 0.00 0.00 31.50 3.84
3272 6448 0.399949 ATACCCCTTCATCGGCTCCA 60.400 55.000 0.00 0.00 0.00 3.86
3365 6541 0.673437 ATGAAACGCCACCAAACCTG 59.327 50.000 0.00 0.00 0.00 4.00
3593 6769 1.002792 GAAAGGTCCGTTGTTGACAGC 60.003 52.381 0.00 0.00 34.36 4.40
3605 6781 2.897326 TGTTGACAGCCAAGCTACTAGA 59.103 45.455 0.00 0.00 36.40 2.43
3615 6791 0.818296 AGCTACTAGAACTGCACGGG 59.182 55.000 0.00 0.00 0.00 5.28
3680 6856 3.837213 AAGAATTCACTTGACATGGCG 57.163 42.857 8.44 0.00 0.00 5.69
3704 6880 5.375417 TCAAGCACATGGTATGTTTCTTG 57.625 39.130 18.18 18.18 44.33 3.02
3818 6994 6.466812 TCTTCACATCTTAGCATCTGTCAAA 58.533 36.000 0.00 0.00 0.00 2.69
3863 7050 5.046529 CAGTGGTGAAGTAGTCATATCTGC 58.953 45.833 0.00 0.00 38.90 4.26
3866 7053 3.243569 GGTGAAGTAGTCATATCTGCGCT 60.244 47.826 9.73 0.00 38.90 5.92
3887 7074 6.314018 CGCTTCTTTATGCAACATTACAAGA 58.686 36.000 0.00 0.00 0.00 3.02
3913 7100 9.308000 ACCAGTATATTTTCATTTTCAAGGTGA 57.692 29.630 0.00 0.00 0.00 4.02
3970 7157 2.233922 CCAGAATACAGACCGGAGTTGT 59.766 50.000 9.46 11.95 0.00 3.32
4012 7199 8.242053 CACATCTGAGTAGCAAATTCATCTTTT 58.758 33.333 0.00 0.00 0.00 2.27
4020 7207 8.186821 AGTAGCAAATTCATCTTTTAGTGATGC 58.813 33.333 0.00 0.00 40.59 3.91
4021 7208 6.927416 AGCAAATTCATCTTTTAGTGATGCA 58.073 32.000 0.00 0.00 40.59 3.96
4076 7263 5.395682 AAAATACACATGAGCATTGCTGT 57.604 34.783 17.51 10.65 39.88 4.40
4242 7429 7.031226 TGTTAGATCTATTTCATGCCTTTGC 57.969 36.000 2.58 0.00 38.26 3.68
4260 7447 6.074142 GCCTTTGCTTGTTTTATTCTGTTGAG 60.074 38.462 0.00 0.00 33.53 3.02
4261 7448 7.202526 CCTTTGCTTGTTTTATTCTGTTGAGA 58.797 34.615 0.00 0.00 0.00 3.27
4313 7501 2.158957 TGATAGGACATTCGGCAGAACC 60.159 50.000 0.00 0.00 39.48 3.62
4342 7530 3.499737 CGTGGCGCATCCCTGTTC 61.500 66.667 10.83 0.00 0.00 3.18
4399 7587 1.884075 CGGTCCGAATGTCTGACCCA 61.884 60.000 4.91 0.00 44.72 4.51
4471 7659 0.250295 CCAACGGGCACTTCTTCTCA 60.250 55.000 0.00 0.00 0.00 3.27
4474 7662 1.078848 CGGGCACTTCTTCTCAGGG 60.079 63.158 0.00 0.00 0.00 4.45
4495 7683 1.136984 CTCGTACGGAGCTGTGTCC 59.863 63.158 16.52 0.00 35.63 4.02
4736 7924 2.177594 CTTCAGCCCCTTCTGACGCT 62.178 60.000 0.00 0.00 42.27 5.07
4771 7959 4.649674 CCCTGCCTCTGTATGTAAAGTCTA 59.350 45.833 0.00 0.00 0.00 2.59
4795 7983 2.579201 CGGTCATCGCCTGTTCCT 59.421 61.111 0.00 0.00 0.00 3.36
4988 8177 1.079057 GAGGCCGGAGAGTTGGTTC 60.079 63.158 5.05 0.00 0.00 3.62
4998 8188 3.556004 GGAGAGTTGGTTCTCTTCACAGG 60.556 52.174 3.36 0.00 43.74 4.00
5077 8310 5.422145 TGTAATCATGTGTGACCATCTCAG 58.578 41.667 0.00 0.00 37.14 3.35
5083 8316 1.196766 TGTGACCATCTCAGGCTGCT 61.197 55.000 10.34 0.00 0.00 4.24
5086 8319 2.254737 GACCATCTCAGGCTGCTGCT 62.255 60.000 15.64 0.00 39.59 4.24
5087 8320 1.820056 CCATCTCAGGCTGCTGCTG 60.820 63.158 15.64 11.31 39.59 4.41
5088 8321 2.124653 ATCTCAGGCTGCTGCTGC 60.125 61.111 21.42 21.42 39.59 5.25
5089 8322 2.671164 ATCTCAGGCTGCTGCTGCT 61.671 57.895 26.79 13.03 40.48 4.24
5090 8323 2.878089 ATCTCAGGCTGCTGCTGCTG 62.878 60.000 26.79 21.78 40.48 4.41
5112 8345 2.016961 CTGCATTCCCAATCGACGG 58.983 57.895 0.00 0.00 0.00 4.79
5120 8353 1.519455 CCAATCGACGGCTCCTGAC 60.519 63.158 0.00 0.00 0.00 3.51
5130 8363 0.179018 GGCTCCTGACCACACAAGTT 60.179 55.000 0.00 0.00 0.00 2.66
5139 8372 0.029300 CCACACAAGTTGGAAGCGTG 59.971 55.000 7.96 6.29 0.00 5.34
5141 8374 1.008538 CACAAGTTGGAAGCGTGGC 60.009 57.895 7.96 0.00 0.00 5.01
5142 8375 2.252260 CAAGTTGGAAGCGTGGCG 59.748 61.111 0.00 0.00 0.00 5.69
5143 8376 2.110213 AAGTTGGAAGCGTGGCGA 59.890 55.556 0.00 0.00 0.00 5.54
5144 8377 1.302511 AAGTTGGAAGCGTGGCGAT 60.303 52.632 0.00 0.00 0.00 4.58
5145 8378 0.889186 AAGTTGGAAGCGTGGCGATT 60.889 50.000 0.00 0.00 38.46 3.34
5146 8379 0.036765 AGTTGGAAGCGTGGCGATTA 60.037 50.000 0.00 0.00 35.04 1.75
5147 8380 0.373716 GTTGGAAGCGTGGCGATTAG 59.626 55.000 0.00 0.00 35.04 1.73
5148 8381 0.036765 TTGGAAGCGTGGCGATTAGT 60.037 50.000 0.00 0.00 35.04 2.24
5149 8382 0.818938 TGGAAGCGTGGCGATTAGTA 59.181 50.000 0.00 0.00 35.04 1.82
5150 8383 1.202371 TGGAAGCGTGGCGATTAGTAG 60.202 52.381 0.00 0.00 35.04 2.57
5151 8384 1.066605 GGAAGCGTGGCGATTAGTAGA 59.933 52.381 0.00 0.00 35.04 2.59
5152 8385 2.480759 GGAAGCGTGGCGATTAGTAGAA 60.481 50.000 0.00 0.00 35.04 2.10
5153 8386 2.493713 AGCGTGGCGATTAGTAGAAG 57.506 50.000 0.00 0.00 0.00 2.85
5154 8387 1.749634 AGCGTGGCGATTAGTAGAAGT 59.250 47.619 0.00 0.00 0.00 3.01
5155 8388 2.165845 AGCGTGGCGATTAGTAGAAGTT 59.834 45.455 0.00 0.00 0.00 2.66
5156 8389 2.928116 GCGTGGCGATTAGTAGAAGTTT 59.072 45.455 0.00 0.00 0.00 2.66
5157 8390 4.107622 GCGTGGCGATTAGTAGAAGTTTA 58.892 43.478 0.00 0.00 0.00 2.01
5158 8391 4.206609 GCGTGGCGATTAGTAGAAGTTTAG 59.793 45.833 0.00 0.00 0.00 1.85
5159 8392 5.338365 CGTGGCGATTAGTAGAAGTTTAGT 58.662 41.667 0.00 0.00 0.00 2.24
5160 8393 6.489675 CGTGGCGATTAGTAGAAGTTTAGTA 58.510 40.000 0.00 0.00 0.00 1.82
5161 8394 6.413235 CGTGGCGATTAGTAGAAGTTTAGTAC 59.587 42.308 0.00 0.00 0.00 2.73
5162 8395 6.413235 GTGGCGATTAGTAGAAGTTTAGTACG 59.587 42.308 0.00 0.00 0.00 3.67
5163 8396 6.094048 TGGCGATTAGTAGAAGTTTAGTACGT 59.906 38.462 0.00 0.00 0.00 3.57
5164 8397 7.279981 TGGCGATTAGTAGAAGTTTAGTACGTA 59.720 37.037 0.00 0.00 0.00 3.57
5165 8398 7.796197 GGCGATTAGTAGAAGTTTAGTACGTAG 59.204 40.741 0.00 0.00 0.00 3.51
5166 8399 7.796197 GCGATTAGTAGAAGTTTAGTACGTAGG 59.204 40.741 0.00 0.00 0.00 3.18
5167 8400 8.279103 CGATTAGTAGAAGTTTAGTACGTAGGG 58.721 40.741 0.00 0.00 0.00 3.53
5168 8401 7.865706 TTAGTAGAAGTTTAGTACGTAGGGG 57.134 40.000 0.00 0.00 0.00 4.79
5169 8402 4.642437 AGTAGAAGTTTAGTACGTAGGGGC 59.358 45.833 0.00 0.00 0.00 5.80
5170 8403 2.762887 AGAAGTTTAGTACGTAGGGGCC 59.237 50.000 0.00 0.00 0.00 5.80
5171 8404 1.489481 AGTTTAGTACGTAGGGGCCC 58.511 55.000 17.12 17.12 0.00 5.80
5172 8405 1.007600 AGTTTAGTACGTAGGGGCCCT 59.992 52.381 31.38 31.38 37.71 5.19
5173 8406 1.137675 GTTTAGTACGTAGGGGCCCTG 59.862 57.143 35.70 21.82 34.61 4.45
5174 8407 0.336048 TTAGTACGTAGGGGCCCTGT 59.664 55.000 35.70 26.42 34.61 4.00
5175 8408 0.336048 TAGTACGTAGGGGCCCTGTT 59.664 55.000 35.70 20.32 34.61 3.16
5176 8409 0.974525 AGTACGTAGGGGCCCTGTTC 60.975 60.000 35.70 21.72 34.61 3.18
5177 8410 1.686800 TACGTAGGGGCCCTGTTCC 60.687 63.158 35.70 18.02 34.61 3.62
5178 8411 2.458969 TACGTAGGGGCCCTGTTCCA 62.459 60.000 35.70 12.32 34.61 3.53
5179 8412 2.675371 GTAGGGGCCCTGTTCCAC 59.325 66.667 35.70 20.95 34.61 4.02
5180 8413 3.006728 TAGGGGCCCTGTTCCACG 61.007 66.667 35.70 0.00 34.61 4.94
5181 8414 3.549433 TAGGGGCCCTGTTCCACGA 62.549 63.158 35.70 9.68 34.61 4.35
5206 8439 2.740447 GGTTAACCAGAGCCGTAAACAG 59.260 50.000 20.12 0.00 35.64 3.16
5225 8471 2.171237 CAGTGCCATCCTGATAGTGGAA 59.829 50.000 0.00 0.00 37.13 3.53
5288 8540 2.037136 GCAGAGTGCTCATGCCGTT 61.037 57.895 1.82 0.00 40.96 4.44
5289 8541 0.740868 GCAGAGTGCTCATGCCGTTA 60.741 55.000 1.82 0.00 40.96 3.18
5290 8542 1.945387 CAGAGTGCTCATGCCGTTAT 58.055 50.000 1.82 0.00 38.71 1.89
5299 8551 1.153369 ATGCCGTTATGCGCAGAGT 60.153 52.632 18.32 0.56 39.71 3.24
5346 8598 4.083862 GTGGCCCACGAGGAGTCC 62.084 72.222 0.00 0.00 38.24 3.85
5424 8676 4.120331 GCAACGGGTGGCTGCATC 62.120 66.667 0.50 0.00 36.09 3.91
5498 8763 4.016706 GGGCTGCCGTACCACACT 62.017 66.667 13.40 0.00 0.00 3.55
5511 8776 0.813610 CCACACTGGTTTCTGTCGCA 60.814 55.000 0.00 0.00 31.35 5.10
5512 8777 0.583438 CACACTGGTTTCTGTCGCAG 59.417 55.000 1.02 1.02 0.00 5.18
5543 8808 0.959553 GACGAGTGAGACAAGGGTGA 59.040 55.000 0.00 0.00 0.00 4.02
5610 8877 1.676384 GGAGCCTGACTGCTTCACT 59.324 57.895 0.00 0.00 42.95 3.41
5622 8889 3.499918 ACTGCTTCACTCACAATACTTGC 59.500 43.478 0.00 0.00 0.00 4.01
5632 8899 1.871039 ACAATACTTGCGGTGTGTGTC 59.129 47.619 0.00 0.00 0.00 3.67
5633 8900 1.870402 CAATACTTGCGGTGTGTGTCA 59.130 47.619 0.00 0.00 0.00 3.58
5634 8901 1.508632 ATACTTGCGGTGTGTGTCAC 58.491 50.000 0.00 0.00 45.47 3.67
5636 8903 0.392461 ACTTGCGGTGTGTGTCACTT 60.392 50.000 4.27 0.00 45.50 3.16
5638 8905 1.132262 CTTGCGGTGTGTGTCACTTTT 59.868 47.619 4.27 0.00 45.50 2.27
5639 8906 0.730265 TGCGGTGTGTGTCACTTTTC 59.270 50.000 4.27 0.00 45.50 2.29
5640 8907 0.028902 GCGGTGTGTGTCACTTTTCC 59.971 55.000 4.27 1.46 45.50 3.13
5641 8908 0.661020 CGGTGTGTGTCACTTTTCCC 59.339 55.000 4.27 0.00 45.50 3.97
5642 8909 1.745827 CGGTGTGTGTCACTTTTCCCT 60.746 52.381 4.27 0.00 45.50 4.20
5644 8911 2.758423 GGTGTGTGTCACTTTTCCCTTT 59.242 45.455 4.27 0.00 45.50 3.11
5646 8913 4.421058 GTGTGTGTCACTTTTCCCTTTTC 58.579 43.478 4.27 0.00 43.13 2.29
5647 8914 3.445805 TGTGTGTCACTTTTCCCTTTTCC 59.554 43.478 4.27 0.00 35.11 3.13
5648 8915 3.699538 GTGTGTCACTTTTCCCTTTTCCT 59.300 43.478 4.27 0.00 0.00 3.36
5649 8916 3.951680 TGTGTCACTTTTCCCTTTTCCTC 59.048 43.478 4.27 0.00 0.00 3.71
5650 8917 3.318275 GTGTCACTTTTCCCTTTTCCTCC 59.682 47.826 0.00 0.00 0.00 4.30
5651 8918 3.204382 TGTCACTTTTCCCTTTTCCTCCT 59.796 43.478 0.00 0.00 0.00 3.69
5653 8920 2.814336 CACTTTTCCCTTTTCCTCCTCG 59.186 50.000 0.00 0.00 0.00 4.63
5654 8921 2.224793 ACTTTTCCCTTTTCCTCCTCGG 60.225 50.000 0.00 0.00 0.00 4.63
5655 8922 0.696501 TTTCCCTTTTCCTCCTCGGG 59.303 55.000 0.00 0.00 36.21 5.14
5679 8961 2.813754 TGCTTTGACCTTTTGATCTCCG 59.186 45.455 0.00 0.00 0.00 4.63
5701 8983 1.067821 GCATCTACGGACCAGAGGAAG 59.932 57.143 0.00 0.00 0.00 3.46
5715 8997 3.112709 GAAGCGCGACCTGACCAC 61.113 66.667 12.10 0.00 0.00 4.16
5723 9005 2.285069 ACCTGACCACGGGCCATA 60.285 61.111 4.39 0.00 45.88 2.74
5731 9013 0.462047 CCACGGGCCATAGTGTCTTC 60.462 60.000 19.37 0.00 36.69 2.87
5732 9014 0.806102 CACGGGCCATAGTGTCTTCG 60.806 60.000 4.39 0.00 33.97 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.422093 GGGGAGCCAAAATCCTCACTAG 60.422 54.545 0.00 0.00 37.27 2.57
39 40 4.519540 AATTTTGGGTTTCATGGACTCG 57.480 40.909 0.00 0.00 0.00 4.18
41 42 6.245890 TGAAAATTTTGGGTTTCATGGACT 57.754 33.333 8.47 0.00 38.50 3.85
42 43 6.934048 TTGAAAATTTTGGGTTTCATGGAC 57.066 33.333 8.47 0.00 41.90 4.02
120 121 7.599171 CGGTAGACATCCATATGTATGTGTAA 58.401 38.462 17.66 1.58 46.49 2.41
192 193 7.226441 TGCATCATAGTATATGACTTTGCCTT 58.774 34.615 15.79 0.00 39.81 4.35
194 195 7.621428 ATGCATCATAGTATATGACTTTGCC 57.379 36.000 15.79 4.93 39.81 4.52
215 216 4.534168 CATTTCTAGCACATGCACTATGC 58.466 43.478 6.64 10.00 45.16 3.14
216 217 4.035909 TGCATTTCTAGCACATGCACTATG 59.964 41.667 15.42 3.88 46.53 2.23
217 218 4.201657 TGCATTTCTAGCACATGCACTAT 58.798 39.130 15.42 0.00 46.53 2.12
218 219 3.608796 TGCATTTCTAGCACATGCACTA 58.391 40.909 15.42 0.00 46.53 2.74
237 238 4.222114 GAGCTACACACACAAAATCTTGC 58.778 43.478 0.00 0.00 35.84 4.01
252 253 6.488344 TGAAATATGTTTTGGTGTGAGCTACA 59.512 34.615 0.00 0.00 36.82 2.74
403 405 9.594936 TCCCCTGATTTATTTACTTTTTGAAGA 57.405 29.630 0.00 0.00 0.00 2.87
404 406 9.639601 GTCCCCTGATTTATTTACTTTTTGAAG 57.360 33.333 0.00 0.00 0.00 3.02
425 427 2.039418 GGAAATTGCTTATGGGTCCCC 58.961 52.381 5.13 0.00 0.00 4.81
427 429 1.067060 GCGGAAATTGCTTATGGGTCC 59.933 52.381 0.00 0.00 0.00 4.46
428 430 2.024414 AGCGGAAATTGCTTATGGGTC 58.976 47.619 0.00 0.00 40.48 4.46
429 431 2.143876 AGCGGAAATTGCTTATGGGT 57.856 45.000 0.00 0.00 40.48 4.51
432 434 7.584108 TGATGTTATAGCGGAAATTGCTTATG 58.416 34.615 0.00 0.00 43.71 1.90
433 435 7.573843 GCTGATGTTATAGCGGAAATTGCTTAT 60.574 37.037 0.00 0.00 43.71 1.73
453 649 3.251004 GCGGGGAGTAAATAAAGCTGATG 59.749 47.826 0.00 0.00 0.00 3.07
455 651 2.237643 TGCGGGGAGTAAATAAAGCTGA 59.762 45.455 0.00 0.00 0.00 4.26
461 3218 2.013058 GCGGTTGCGGGGAGTAAATAA 61.013 52.381 0.00 0.00 0.00 1.40
652 3419 3.787001 GAGGGAAGGGGGAGTGCG 61.787 72.222 0.00 0.00 0.00 5.34
653 3420 3.412408 GGAGGGAAGGGGGAGTGC 61.412 72.222 0.00 0.00 0.00 4.40
654 3421 3.083997 CGGAGGGAAGGGGGAGTG 61.084 72.222 0.00 0.00 0.00 3.51
700 3705 1.520342 GAGATGAGCTGTGCGGGAC 60.520 63.158 0.00 0.00 0.00 4.46
701 3706 1.332889 ATGAGATGAGCTGTGCGGGA 61.333 55.000 0.00 0.00 0.00 5.14
702 3707 0.879400 GATGAGATGAGCTGTGCGGG 60.879 60.000 0.00 0.00 0.00 6.13
740 3745 1.183030 TGTCGCTTTTCCCCTCGAGA 61.183 55.000 15.71 0.00 0.00 4.04
797 3802 3.860605 TGTGGTGTGCTCGCTGGT 61.861 61.111 0.00 0.00 0.00 4.00
881 3887 1.432270 CGGGAAGCTTCGATTGGAGC 61.432 60.000 19.91 4.88 0.00 4.70
953 3989 4.643387 ACCGGAGCACTGGCCAAC 62.643 66.667 9.46 0.00 45.88 3.77
1103 4188 2.413112 CACACACAGACGGATGATTCAC 59.587 50.000 0.00 0.00 0.00 3.18
1104 4189 2.687370 CACACACAGACGGATGATTCA 58.313 47.619 0.00 0.00 0.00 2.57
1105 4190 1.394917 GCACACACAGACGGATGATTC 59.605 52.381 0.00 0.00 0.00 2.52
1106 4191 1.002430 AGCACACACAGACGGATGATT 59.998 47.619 0.00 0.00 0.00 2.57
1111 4196 1.324383 TAAGAGCACACACAGACGGA 58.676 50.000 0.00 0.00 0.00 4.69
1124 4209 9.591792 AATCATTTAATTCCAGCTTTTAAGAGC 57.408 29.630 9.93 9.93 43.02 4.09
1166 4251 6.024049 GCAGAAAAATGTCTAACATCCTTCG 58.976 40.000 0.00 0.00 37.97 3.79
1172 4257 6.656693 AGCTAGTGCAGAAAAATGTCTAACAT 59.343 34.615 0.00 0.00 40.38 2.71
1177 4262 5.065914 TGAAGCTAGTGCAGAAAAATGTCT 58.934 37.500 0.00 0.00 42.74 3.41
1178 4263 5.362556 TGAAGCTAGTGCAGAAAAATGTC 57.637 39.130 0.00 0.00 42.74 3.06
1194 4282 7.382218 CGACCAAAAATACAAAGAATTGAAGCT 59.618 33.333 0.00 0.00 38.94 3.74
1204 4292 7.060174 CGGTACAAATCGACCAAAAATACAAAG 59.940 37.037 0.00 0.00 35.26 2.77
1205 4293 6.856938 CGGTACAAATCGACCAAAAATACAAA 59.143 34.615 0.00 0.00 35.26 2.83
1206 4294 6.372185 CGGTACAAATCGACCAAAAATACAA 58.628 36.000 0.00 0.00 35.26 2.41
1215 4303 2.094078 CCTAACCGGTACAAATCGACCA 60.094 50.000 8.00 0.00 35.26 4.02
1230 4318 7.339976 AGAGAGTACAGAGTTAACATCCTAACC 59.660 40.741 8.61 0.00 33.06 2.85
1232 4320 7.339721 CCAGAGAGTACAGAGTTAACATCCTAA 59.660 40.741 8.61 0.00 0.00 2.69
1233 4321 6.829298 CCAGAGAGTACAGAGTTAACATCCTA 59.171 42.308 8.61 0.00 0.00 2.94
1234 4322 5.654650 CCAGAGAGTACAGAGTTAACATCCT 59.345 44.000 8.61 0.00 0.00 3.24
1235 4323 5.680151 GCCAGAGAGTACAGAGTTAACATCC 60.680 48.000 8.61 0.00 0.00 3.51
1236 4324 5.344884 GCCAGAGAGTACAGAGTTAACATC 58.655 45.833 8.61 2.88 0.00 3.06
1237 4325 4.160626 GGCCAGAGAGTACAGAGTTAACAT 59.839 45.833 8.61 0.00 0.00 2.71
1238 4326 3.510360 GGCCAGAGAGTACAGAGTTAACA 59.490 47.826 8.61 0.00 0.00 2.41
1239 4327 3.764972 AGGCCAGAGAGTACAGAGTTAAC 59.235 47.826 5.01 0.00 0.00 2.01
1240 4328 3.764434 CAGGCCAGAGAGTACAGAGTTAA 59.236 47.826 5.01 0.00 0.00 2.01
1241 4329 3.010250 TCAGGCCAGAGAGTACAGAGTTA 59.990 47.826 5.01 0.00 0.00 2.24
1242 4330 2.175202 CAGGCCAGAGAGTACAGAGTT 58.825 52.381 5.01 0.00 0.00 3.01
1243 4331 1.356059 TCAGGCCAGAGAGTACAGAGT 59.644 52.381 5.01 0.00 0.00 3.24
1245 4333 1.356059 ACTCAGGCCAGAGAGTACAGA 59.644 52.381 30.05 0.00 42.92 3.41
1253 4341 1.189752 TCAGCTTACTCAGGCCAGAG 58.810 55.000 22.70 22.70 41.44 3.35
1257 4345 3.406764 CCAATATCAGCTTACTCAGGCC 58.593 50.000 0.00 0.00 0.00 5.19
1277 4365 2.203625 AACACACATGGCACCCCC 60.204 61.111 0.00 0.00 0.00 5.40
1324 4412 3.127895 CGGCCTACAAATGAAAATCCGAA 59.872 43.478 0.00 0.00 36.77 4.30
1327 4415 3.694566 AGACGGCCTACAAATGAAAATCC 59.305 43.478 0.00 0.00 0.00 3.01
1345 4433 2.162608 ACAGCTACTACTGAAGCAGACG 59.837 50.000 0.82 0.00 41.32 4.18
1356 4444 3.262420 CAACATCCACCACAGCTACTAC 58.738 50.000 0.00 0.00 0.00 2.73
1357 4445 2.236146 CCAACATCCACCACAGCTACTA 59.764 50.000 0.00 0.00 0.00 1.82
1358 4446 1.003580 CCAACATCCACCACAGCTACT 59.996 52.381 0.00 0.00 0.00 2.57
1359 4447 1.003118 TCCAACATCCACCACAGCTAC 59.997 52.381 0.00 0.00 0.00 3.58
1392 4483 1.606668 CTCCGCACTTGCCTTTAACAA 59.393 47.619 0.00 0.00 37.91 2.83
1393 4484 1.234821 CTCCGCACTTGCCTTTAACA 58.765 50.000 0.00 0.00 37.91 2.41
1394 4485 0.109735 GCTCCGCACTTGCCTTTAAC 60.110 55.000 0.00 0.00 37.91 2.01
1395 4486 0.536233 TGCTCCGCACTTGCCTTTAA 60.536 50.000 0.00 0.00 37.91 1.52
1396 4487 0.536233 TTGCTCCGCACTTGCCTTTA 60.536 50.000 0.00 0.00 38.71 1.85
1397 4488 1.391157 TTTGCTCCGCACTTGCCTTT 61.391 50.000 0.00 0.00 38.71 3.11
1398 4489 1.799258 CTTTGCTCCGCACTTGCCTT 61.799 55.000 0.00 0.00 38.71 4.35
1399 4490 2.203337 TTTGCTCCGCACTTGCCT 60.203 55.556 0.00 0.00 38.71 4.75
1400 4491 2.256461 CTTTGCTCCGCACTTGCC 59.744 61.111 0.00 0.00 38.71 4.52
1401 4492 2.429739 GCTTTGCTCCGCACTTGC 60.430 61.111 0.00 0.00 38.71 4.01
1402 4493 2.116736 TTCGCTTTGCTCCGCACTTG 62.117 55.000 0.00 0.00 38.71 3.16
1403 4494 1.444119 TTTCGCTTTGCTCCGCACTT 61.444 50.000 0.00 0.00 38.71 3.16
1404 4495 1.891919 TTTCGCTTTGCTCCGCACT 60.892 52.632 0.00 0.00 38.71 4.40
1405 4496 1.725973 GTTTCGCTTTGCTCCGCAC 60.726 57.895 0.00 0.00 38.71 5.34
1406 4497 1.444119 AAGTTTCGCTTTGCTCCGCA 61.444 50.000 0.00 0.00 36.47 5.69
1407 4498 0.515564 TAAGTTTCGCTTTGCTCCGC 59.484 50.000 0.00 0.00 38.57 5.54
1408 4499 2.961522 TTAAGTTTCGCTTTGCTCCG 57.038 45.000 0.00 0.00 38.57 4.63
1409 4500 3.981416 CCTTTTAAGTTTCGCTTTGCTCC 59.019 43.478 0.00 0.00 38.57 4.70
1410 4501 3.425525 GCCTTTTAAGTTTCGCTTTGCTC 59.574 43.478 0.00 0.00 38.57 4.26
1438 4529 3.207321 AGCCAAATAATGAGATCCCCCAA 59.793 43.478 0.00 0.00 0.00 4.12
1440 4531 3.532641 AGCCAAATAATGAGATCCCCC 57.467 47.619 0.00 0.00 0.00 5.40
1497 4588 3.799420 CACCCACCGTGTTTATTTGTTTG 59.201 43.478 0.00 0.00 37.73 2.93
1541 4632 2.237143 TGACCTGGTCAGCTCATAAAGG 59.763 50.000 25.12 0.00 37.67 3.11
1542 4633 3.616956 TGACCTGGTCAGCTCATAAAG 57.383 47.619 25.12 0.00 37.67 1.85
1543 4634 4.574674 ATTGACCTGGTCAGCTCATAAA 57.425 40.909 26.94 12.25 43.69 1.40
1544 4635 4.574674 AATTGACCTGGTCAGCTCATAA 57.425 40.909 26.94 12.96 43.69 1.90
1545 4636 4.264253 CAAATTGACCTGGTCAGCTCATA 58.736 43.478 26.94 13.67 43.69 2.15
1546 4637 3.087031 CAAATTGACCTGGTCAGCTCAT 58.913 45.455 26.94 16.30 43.69 2.90
1551 4720 2.440409 CCTCCAAATTGACCTGGTCAG 58.560 52.381 26.94 16.49 43.69 3.51
1577 4746 8.515695 TTCTCTTCATTTGCAGAATATCATGT 57.484 30.769 0.00 0.00 0.00 3.21
1661 4830 9.048446 CAGAAAACAAACCAATGATCATTCTTT 57.952 29.630 18.16 14.56 0.00 2.52
1676 4845 6.186785 CACAATGCAATGACAGAAAACAAAC 58.813 36.000 9.20 0.00 0.00 2.93
1696 4865 7.182817 ACAGAGGTATTACTGAATAGCACAA 57.817 36.000 0.00 0.00 44.88 3.33
1724 4898 3.886505 ACTGCCAAAACGTCCTTCATTAA 59.113 39.130 0.00 0.00 0.00 1.40
1805 4979 4.325972 TGCTGACATGCATTAACAAGAGA 58.674 39.130 0.00 0.00 38.12 3.10
1846 5020 6.851837 GTGCAACACAAAACACGTTACATATA 59.148 34.615 0.00 0.00 36.32 0.86
1847 5021 5.683743 GTGCAACACAAAACACGTTACATAT 59.316 36.000 0.00 0.00 36.32 1.78
1848 5022 5.029014 GTGCAACACAAAACACGTTACATA 58.971 37.500 0.00 0.00 36.32 2.29
1849 5023 3.854809 GTGCAACACAAAACACGTTACAT 59.145 39.130 0.00 0.00 36.32 2.29
1850 5024 3.058155 AGTGCAACACAAAACACGTTACA 60.058 39.130 0.00 0.00 41.43 2.41
1851 5025 3.494232 AGTGCAACACAAAACACGTTAC 58.506 40.909 0.00 0.00 41.43 2.50
1856 5030 2.163412 TGAGGAGTGCAACACAAAACAC 59.837 45.455 0.00 0.00 41.43 3.32
2059 5233 6.142320 GGACTAGTTTGCAAACGAAAATCTTG 59.858 38.462 30.90 17.50 43.51 3.02
2101 5275 9.631257 TCCTAGAATTTAATGAGATCATTTGCA 57.369 29.630 12.96 0.00 43.48 4.08
2130 5304 6.882140 ACCGAATTCCATTTGTACAGAACATA 59.118 34.615 0.00 0.00 38.10 2.29
2134 5308 6.469410 ACTACCGAATTCCATTTGTACAGAA 58.531 36.000 0.00 0.00 0.00 3.02
2144 5318 4.007659 GTCACCAAACTACCGAATTCCAT 58.992 43.478 0.00 0.00 0.00 3.41
2157 5331 3.047877 CGAGGCCGGTCACCAAAC 61.048 66.667 9.71 0.00 0.00 2.93
2188 5362 7.087007 TGATTTTAAATACGAGCAATGCAACA 58.913 30.769 8.35 0.00 0.00 3.33
2199 5373 9.667107 AATCCTGTTCTCTGATTTTAAATACGA 57.333 29.630 0.00 0.00 0.00 3.43
2240 5414 1.330234 TTGCCACACATGCATGTCTT 58.670 45.000 29.23 16.38 39.39 3.01
2276 5450 6.006449 AGGCAATTCAAAAGAGTGTGTCTAT 58.994 36.000 0.00 0.00 32.65 1.98
2282 5456 3.299503 ACCAGGCAATTCAAAAGAGTGT 58.700 40.909 0.00 0.00 0.00 3.55
2349 5523 7.715657 TGCTTATTGCCATTAGAAAACTATGG 58.284 34.615 0.00 0.00 42.00 2.74
2429 5605 3.993081 CAGAGTTACTTCTTGCTGGTCTG 59.007 47.826 0.00 0.00 0.00 3.51
2513 5689 5.997129 TGAACTGACAGATGAAATACTTGCA 59.003 36.000 10.08 0.00 0.00 4.08
2640 5816 1.269831 GGATGGTGTAGATGGACGAGC 60.270 57.143 0.00 0.00 0.00 5.03
2697 5873 5.057149 GTCAGTTGTAGAGTTGGATGTTGT 58.943 41.667 0.00 0.00 0.00 3.32
2712 5888 2.109799 AGCAGCTGCGTCAGTTGT 59.890 55.556 31.78 10.16 43.05 3.32
2780 5956 9.861138 GAAGATGAATTCAACATAATTCGAGAG 57.139 33.333 13.09 0.00 45.04 3.20
2844 6020 4.380655 GCTCGTCGCAGGAATTATACCTAT 60.381 45.833 0.00 0.00 38.92 2.57
2852 6028 2.509336 CGGCTCGTCGCAGGAATT 60.509 61.111 2.27 0.00 41.67 2.17
2876 6052 4.264253 CATGACCATTACTTGAGGAAGCA 58.736 43.478 0.00 0.00 31.68 3.91
2910 6086 1.003580 GCCAGAAGACAATGAGGTGGA 59.996 52.381 0.00 0.00 0.00 4.02
2930 6106 2.398498 CGACTCACTGAAGGAACTGTG 58.602 52.381 0.00 0.00 40.86 3.66
2956 6132 0.741326 AGGTGTCGATGATCGTGAGG 59.259 55.000 15.06 0.00 41.35 3.86
2969 6145 0.388649 CAGGCTGACGTGTAGGTGTC 60.389 60.000 9.42 0.00 35.67 3.67
3051 6227 5.468072 GGTTCATAGATGTGGTCAAGCTATG 59.532 44.000 0.00 0.00 40.39 2.23
3062 6238 2.205074 GCAGGTCGGTTCATAGATGTG 58.795 52.381 0.00 0.00 0.00 3.21
3089 6265 0.861837 GTGCTGAACTTCGGACACTG 59.138 55.000 13.59 0.00 31.62 3.66
3094 6270 1.006571 GACGGTGCTGAACTTCGGA 60.007 57.895 1.42 0.00 0.00 4.55
3116 6292 2.592861 GGGCGTGATGATGGAGCC 60.593 66.667 0.00 0.00 46.51 4.70
3128 6304 3.966543 CCTGGGGAACTTGGGCGT 61.967 66.667 0.00 0.00 0.00 5.68
3131 6307 2.160171 TGGACCTGGGGAACTTGGG 61.160 63.158 0.00 0.00 0.00 4.12
3171 6347 2.355108 CCGAGGAAGGAATGTCATGTGT 60.355 50.000 0.00 0.00 0.00 3.72
3188 6364 0.039617 GACGAGATGATGGAGCCGAG 60.040 60.000 0.00 0.00 0.00 4.63
3198 6374 1.330655 GGGGAGCTTGGACGAGATGA 61.331 60.000 0.00 0.00 0.00 2.92
3266 6442 0.465705 TTGGACGAGATGATGGAGCC 59.534 55.000 0.00 0.00 0.00 4.70
3272 6448 0.755686 GGGAGCTTGGACGAGATGAT 59.244 55.000 0.00 0.00 0.00 2.45
3314 6490 0.179045 GGATATCAAGTGGCCGCACT 60.179 55.000 20.59 4.11 36.92 4.40
3476 6652 0.519077 CAGGCACGGAGAGCTTTTTC 59.481 55.000 0.00 0.00 45.31 2.29
3593 6769 2.263077 CGTGCAGTTCTAGTAGCTTGG 58.737 52.381 0.00 0.00 0.00 3.61
3680 6856 5.824904 AGAAACATACCATGTGCTTGATC 57.175 39.130 0.00 0.00 44.07 2.92
3830 7017 7.707893 TGACTACTTCACCACTGTAACTTAAAC 59.292 37.037 0.00 0.00 0.00 2.01
3863 7050 6.249260 GTCTTGTAATGTTGCATAAAGAAGCG 59.751 38.462 0.00 0.00 0.00 4.68
3866 7053 7.230510 ACTGGTCTTGTAATGTTGCATAAAGAA 59.769 33.333 0.00 0.00 0.00 2.52
3887 7074 9.308000 TCACCTTGAAAATGAAAATATACTGGT 57.692 29.630 0.00 0.00 0.00 4.00
3924 7111 4.870426 CCATACGACTAATTCACTTGCAGT 59.130 41.667 0.00 0.00 0.00 4.40
3942 7129 3.243771 CCGGTCTGTATTCTGGACCATAC 60.244 52.174 11.16 0.00 46.93 2.39
3970 7157 8.375506 ACTCAGATGTGAAATAGTCCAACTTTA 58.624 33.333 0.00 0.00 30.14 1.85
4057 7244 3.613030 TCACAGCAATGCTCATGTGTAT 58.387 40.909 20.42 0.00 36.40 2.29
4065 7252 1.001048 TGCAGTTTCACAGCAATGCTC 60.001 47.619 4.03 0.00 37.68 4.26
4172 7359 7.915293 TTTGAGTTTCACTTTACTTGACAGA 57.085 32.000 0.00 0.00 0.00 3.41
4204 7391 3.685139 TCTAACAAGGAGCCAGTCAAG 57.315 47.619 0.00 0.00 0.00 3.02
4242 7429 8.348507 AGCTTCTTCTCAACAGAATAAAACAAG 58.651 33.333 0.00 0.00 38.02 3.16
4260 7447 7.097834 AGTACACTGGTGTAATTAGCTTCTTC 58.902 38.462 14.10 0.00 46.33 2.87
4261 7448 7.005709 AGTACACTGGTGTAATTAGCTTCTT 57.994 36.000 14.10 0.00 46.33 2.52
4399 7587 1.384191 GTTCAAGGTGGGATGCCCT 59.616 57.895 0.00 0.00 45.70 5.19
4471 7659 2.439883 GCTCCGTACGAGTCCCCT 60.440 66.667 18.76 0.00 41.10 4.79
4474 7662 1.136984 CACAGCTCCGTACGAGTCC 59.863 63.158 18.76 1.89 41.10 3.85
4988 8177 5.991606 TGTAACAACAATCTCCTGTGAAGAG 59.008 40.000 0.00 0.00 0.00 2.85
5090 8323 1.065273 CGATTGGGAATGCAGCAGC 59.935 57.895 0.00 0.00 42.57 5.25
5091 8324 0.379669 GTCGATTGGGAATGCAGCAG 59.620 55.000 0.00 0.00 0.00 4.24
5092 8325 1.368345 CGTCGATTGGGAATGCAGCA 61.368 55.000 0.00 0.00 0.00 4.41
5093 8326 1.353103 CGTCGATTGGGAATGCAGC 59.647 57.895 0.00 0.00 0.00 5.25
5094 8327 2.016961 CCGTCGATTGGGAATGCAG 58.983 57.895 0.00 0.00 0.00 4.41
5099 8332 1.987855 AGGAGCCGTCGATTGGGAA 60.988 57.895 8.53 0.00 0.00 3.97
5112 8345 0.947244 CAACTTGTGTGGTCAGGAGC 59.053 55.000 0.00 0.00 0.00 4.70
5120 8353 0.029300 CACGCTTCCAACTTGTGTGG 59.971 55.000 0.00 0.00 38.20 4.17
5130 8363 0.818938 TACTAATCGCCACGCTTCCA 59.181 50.000 0.00 0.00 0.00 3.53
5139 8372 6.490534 ACGTACTAAACTTCTACTAATCGCC 58.509 40.000 0.00 0.00 0.00 5.54
5141 8374 8.279103 CCCTACGTACTAAACTTCTACTAATCG 58.721 40.741 0.00 0.00 0.00 3.34
5142 8375 8.563732 CCCCTACGTACTAAACTTCTACTAATC 58.436 40.741 0.00 0.00 0.00 1.75
5143 8376 7.013750 GCCCCTACGTACTAAACTTCTACTAAT 59.986 40.741 0.00 0.00 0.00 1.73
5144 8377 6.318900 GCCCCTACGTACTAAACTTCTACTAA 59.681 42.308 0.00 0.00 0.00 2.24
5145 8378 5.823045 GCCCCTACGTACTAAACTTCTACTA 59.177 44.000 0.00 0.00 0.00 1.82
5146 8379 4.642437 GCCCCTACGTACTAAACTTCTACT 59.358 45.833 0.00 0.00 0.00 2.57
5147 8380 4.202060 GGCCCCTACGTACTAAACTTCTAC 60.202 50.000 0.00 0.00 0.00 2.59
5148 8381 3.954258 GGCCCCTACGTACTAAACTTCTA 59.046 47.826 0.00 0.00 0.00 2.10
5149 8382 2.762887 GGCCCCTACGTACTAAACTTCT 59.237 50.000 0.00 0.00 0.00 2.85
5150 8383 2.159043 GGGCCCCTACGTACTAAACTTC 60.159 54.545 12.23 0.00 0.00 3.01
5151 8384 1.833630 GGGCCCCTACGTACTAAACTT 59.166 52.381 12.23 0.00 0.00 2.66
5152 8385 1.007600 AGGGCCCCTACGTACTAAACT 59.992 52.381 21.43 0.00 28.47 2.66
5153 8386 1.137675 CAGGGCCCCTACGTACTAAAC 59.862 57.143 21.43 0.00 29.64 2.01
5154 8387 1.273211 ACAGGGCCCCTACGTACTAAA 60.273 52.381 21.43 0.00 29.64 1.85
5155 8388 0.336048 ACAGGGCCCCTACGTACTAA 59.664 55.000 21.43 0.00 29.64 2.24
5156 8389 0.336048 AACAGGGCCCCTACGTACTA 59.664 55.000 21.43 0.00 29.64 1.82
5157 8390 0.974525 GAACAGGGCCCCTACGTACT 60.975 60.000 21.43 0.00 29.64 2.73
5158 8391 1.519246 GAACAGGGCCCCTACGTAC 59.481 63.158 21.43 0.00 29.64 3.67
5159 8392 1.686800 GGAACAGGGCCCCTACGTA 60.687 63.158 21.43 0.00 29.64 3.57
5160 8393 3.007323 GGAACAGGGCCCCTACGT 61.007 66.667 21.43 8.22 29.64 3.57
5161 8394 3.006728 TGGAACAGGGCCCCTACG 61.007 66.667 21.43 7.45 29.64 3.51
5162 8395 2.675371 GTGGAACAGGGCCCCTAC 59.325 66.667 21.43 7.42 41.80 3.18
5163 8396 3.006728 CGTGGAACAGGGCCCCTA 61.007 66.667 21.43 0.00 41.80 3.53
5164 8397 4.974438 TCGTGGAACAGGGCCCCT 62.974 66.667 21.43 0.00 45.22 4.79
5165 8398 4.717313 GTCGTGGAACAGGGCCCC 62.717 72.222 21.43 1.70 43.64 5.80
5206 8439 2.435805 TCTTCCACTATCAGGATGGCAC 59.564 50.000 0.00 0.00 36.16 5.01
5225 8471 0.539051 CGCCAACCATCCTTCTCTCT 59.461 55.000 0.00 0.00 0.00 3.10
5299 8551 1.453235 GGATCCAGCCAGCATAGCA 59.547 57.895 6.95 0.00 0.00 3.49
5419 8671 4.529219 CTACAGCGGGCGGATGCA 62.529 66.667 10.38 0.00 45.35 3.96
5493 8758 0.583438 CTGCGACAGAAACCAGTGTG 59.417 55.000 1.18 0.00 32.44 3.82
5494 8759 0.532862 CCTGCGACAGAAACCAGTGT 60.533 55.000 8.20 0.00 32.44 3.55
5498 8763 1.300620 CGACCTGCGACAGAAACCA 60.301 57.895 8.20 0.00 44.57 3.67
5543 8808 1.819632 GTTGCATTCGGAGGGCGAT 60.820 57.895 0.00 0.00 0.00 4.58
5632 8899 2.814336 CGAGGAGGAAAAGGGAAAAGTG 59.186 50.000 0.00 0.00 0.00 3.16
5633 8900 2.224793 CCGAGGAGGAAAAGGGAAAAGT 60.225 50.000 0.00 0.00 45.00 2.66
5634 8901 2.437413 CCGAGGAGGAAAAGGGAAAAG 58.563 52.381 0.00 0.00 45.00 2.27
5636 8903 0.696501 CCCGAGGAGGAAAAGGGAAA 59.303 55.000 0.00 0.00 44.70 3.13
5638 8905 1.160145 ACCCGAGGAGGAAAAGGGA 59.840 57.895 5.77 0.00 44.70 4.20
5640 8907 0.321653 CACACCCGAGGAGGAAAAGG 60.322 60.000 0.00 0.00 45.00 3.11
5641 8908 0.955919 GCACACCCGAGGAGGAAAAG 60.956 60.000 0.00 0.00 45.00 2.27
5642 8909 1.072505 GCACACCCGAGGAGGAAAA 59.927 57.895 0.00 0.00 45.00 2.29
5644 8911 1.415672 AAAGCACACCCGAGGAGGAA 61.416 55.000 0.00 0.00 45.00 3.36
5646 8913 1.672356 CAAAGCACACCCGAGGAGG 60.672 63.158 0.00 0.00 40.63 4.30
5647 8914 0.951040 GTCAAAGCACACCCGAGGAG 60.951 60.000 0.00 0.00 0.00 3.69
5648 8915 1.070786 GTCAAAGCACACCCGAGGA 59.929 57.895 0.00 0.00 0.00 3.71
5649 8916 1.966451 GGTCAAAGCACACCCGAGG 60.966 63.158 0.00 0.00 0.00 4.63
5650 8917 0.535102 AAGGTCAAAGCACACCCGAG 60.535 55.000 0.00 0.00 32.45 4.63
5651 8918 0.106918 AAAGGTCAAAGCACACCCGA 60.107 50.000 0.00 0.00 32.45 5.14
5653 8920 1.754226 TCAAAAGGTCAAAGCACACCC 59.246 47.619 0.00 0.00 32.45 4.61
5654 8921 3.319122 AGATCAAAAGGTCAAAGCACACC 59.681 43.478 0.00 0.00 0.00 4.16
5655 8922 4.540824 GAGATCAAAAGGTCAAAGCACAC 58.459 43.478 0.00 0.00 0.00 3.82
5679 8961 1.742768 CTCTGGTCCGTAGATGCCC 59.257 63.158 0.00 0.00 0.00 5.36
5715 8997 4.420143 CGAAGACACTATGGCCCG 57.580 61.111 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.