Multiple sequence alignment - TraesCS1B01G309900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G309900 chr1B 100.000 3296 0 0 1 3296 532681478 532684773 0.000000e+00 6087.0
1 TraesCS1B01G309900 chr1B 96.418 977 32 3 124 1100 31564049 31563076 0.000000e+00 1607.0
2 TraesCS1B01G309900 chr1B 96.530 951 31 2 1159 2107 357457741 357456791 0.000000e+00 1572.0
3 TraesCS1B01G309900 chr1B 94.882 977 39 4 124 1100 31541079 31540114 0.000000e+00 1517.0
4 TraesCS1B01G309900 chr1B 93.764 449 27 1 2117 2564 532545359 532545807 0.000000e+00 673.0
5 TraesCS1B01G309900 chr1B 98.367 245 4 0 2600 2844 91965678 91965434 6.530000e-117 431.0
6 TraesCS1B01G309900 chr1B 85.224 379 52 3 1730 2108 333488007 333488381 1.430000e-103 387.0
7 TraesCS1B01G309900 chr1B 86.331 278 14 5 2848 3118 532548010 532548270 6.960000e-72 281.0
8 TraesCS1B01G309900 chr1B 91.411 163 14 0 3134 3296 368916270 368916108 1.190000e-54 224.0
9 TraesCS1B01G309900 chr1B 97.619 126 3 0 1 126 367745571 367745696 1.990000e-52 217.0
10 TraesCS1B01G309900 chr1B 100.000 31 0 0 1101 1131 532545316 532545346 1.280000e-04 58.4
11 TraesCS1B01G309900 chr5D 96.520 977 34 0 124 1100 63156447 63157423 0.000000e+00 1616.0
12 TraesCS1B01G309900 chr5D 92.371 852 59 2 1159 2005 507756673 507757523 0.000000e+00 1208.0
13 TraesCS1B01G309900 chr5D 79.029 968 200 3 133 1099 377316739 377317704 0.000000e+00 660.0
14 TraesCS1B01G309900 chr5D 88.983 118 11 1 1965 2082 514918714 514918829 9.530000e-31 145.0
15 TraesCS1B01G309900 chr7B 96.324 952 29 6 1159 2107 626048277 626049225 0.000000e+00 1559.0
16 TraesCS1B01G309900 chr7B 91.358 162 11 2 3137 3296 377002642 377002802 5.540000e-53 219.0
17 TraesCS1B01G309900 chr2D 93.723 924 54 3 1159 2081 100429631 100430551 0.000000e+00 1382.0
18 TraesCS1B01G309900 chr2D 91.463 164 14 0 3133 3296 106336059 106336222 3.310000e-55 226.0
19 TraesCS1B01G309900 chr2A 92.744 951 60 3 1159 2108 585194238 585195180 0.000000e+00 1365.0
20 TraesCS1B01G309900 chr2A 93.391 923 60 1 1161 2083 595239472 595240393 0.000000e+00 1365.0
21 TraesCS1B01G309900 chr2A 93.401 591 37 2 512 1100 773372156 773371566 0.000000e+00 874.0
22 TraesCS1B01G309900 chr2A 98.780 246 3 0 2597 2842 553492273 553492518 3.900000e-119 438.0
23 TraesCS1B01G309900 chr1D 95.943 838 33 1 124 961 446735658 446734822 0.000000e+00 1358.0
24 TraesCS1B01G309900 chr1D 87.213 305 9 9 2840 3129 397215602 397215891 1.480000e-83 320.0
25 TraesCS1B01G309900 chr1D 90.419 167 14 1 3132 3296 247505764 247505598 5.540000e-53 219.0
26 TraesCS1B01G309900 chr1D 86.154 130 17 1 1 130 3862169 3862041 4.430000e-29 139.0
27 TraesCS1B01G309900 chr1D 93.421 76 1 4 2362 2436 397213764 397213836 3.480000e-20 110.0
28 TraesCS1B01G309900 chr3A 91.676 925 60 8 1159 2083 725192787 725191880 0.000000e+00 1266.0
29 TraesCS1B01G309900 chr3A 98.394 249 3 1 2594 2842 19876610 19876363 1.400000e-118 436.0
30 TraesCS1B01G309900 chr3A 98.770 244 3 0 2597 2840 178130360 178130603 5.050000e-118 435.0
31 TraesCS1B01G309900 chr3A 90.909 165 15 0 3132 3296 186908150 186907986 4.280000e-54 222.0
32 TraesCS1B01G309900 chr6D 89.794 970 97 2 132 1100 316424659 316425627 0.000000e+00 1242.0
33 TraesCS1B01G309900 chr6D 100.000 88 0 0 1 88 61768564 61768477 2.630000e-36 163.0
34 TraesCS1B01G309900 chr1A 95.376 757 34 1 124 880 536340621 536341376 0.000000e+00 1203.0
35 TraesCS1B01G309900 chr1A 98.770 244 3 0 2599 2842 580495062 580495305 5.050000e-118 435.0
36 TraesCS1B01G309900 chr1A 90.000 250 21 2 2354 2599 494744229 494744478 1.480000e-83 320.0
37 TraesCS1B01G309900 chr1A 96.154 156 5 1 2965 3120 494752138 494752292 1.520000e-63 254.0
38 TraesCS1B01G309900 chr1A 94.030 67 4 0 1101 1167 494743572 494743638 5.820000e-18 102.0
39 TraesCS1B01G309900 chr3B 88.339 909 94 9 1161 2060 133809956 133809051 0.000000e+00 1081.0
40 TraesCS1B01G309900 chr3B 97.992 249 5 0 2592 2840 587434684 587434436 1.820000e-117 433.0
41 TraesCS1B01G309900 chr3B 97.619 126 3 0 1 126 63385377 63385502 1.990000e-52 217.0
42 TraesCS1B01G309900 chr3B 84.962 133 18 2 1 133 704296230 704296360 2.060000e-27 134.0
43 TraesCS1B01G309900 chr3B 98.246 57 1 0 71 127 11732384 11732328 2.090000e-17 100.0
44 TraesCS1B01G309900 chr4B 88.248 902 97 5 1161 2060 184612637 184611743 0.000000e+00 1070.0
45 TraesCS1B01G309900 chr4B 91.489 282 22 1 126 405 455604629 455604910 1.430000e-103 387.0
46 TraesCS1B01G309900 chr4B 91.463 164 13 1 3133 3296 42139208 42139046 1.190000e-54 224.0
47 TraesCS1B01G309900 chr4B 91.250 160 14 0 3137 3296 417552462 417552303 5.540000e-53 219.0
48 TraesCS1B01G309900 chr6B 89.152 719 73 4 332 1049 508177313 508176599 0.000000e+00 891.0
49 TraesCS1B01G309900 chr6B 98.000 250 5 0 2592 2841 702697142 702697391 5.050000e-118 435.0
50 TraesCS1B01G309900 chr6B 96.032 126 5 0 1 126 511695160 511695285 4.310000e-49 206.0
51 TraesCS1B01G309900 chr5B 96.806 407 11 2 1704 2109 605507048 605507453 0.000000e+00 678.0
52 TraesCS1B01G309900 chr5B 98.413 126 2 0 1 126 672837069 672836944 4.280000e-54 222.0
53 TraesCS1B01G309900 chr5B 98.889 90 1 0 1 90 28479572 28479483 9.470000e-36 161.0
54 TraesCS1B01G309900 chr6A 92.601 419 30 1 1692 2110 577016420 577016003 4.710000e-168 601.0
55 TraesCS1B01G309900 chr5A 99.174 242 2 0 2600 2841 633646075 633646316 1.400000e-118 436.0
56 TraesCS1B01G309900 chr5A 89.773 176 17 1 3122 3296 547123875 547124050 1.190000e-54 224.0
57 TraesCS1B01G309900 chr5A 90.769 130 5 3 1 126 687883042 687883168 2.030000e-37 167.0
58 TraesCS1B01G309900 chr4A 99.174 242 2 0 2599 2840 492533622 492533863 1.400000e-118 436.0
59 TraesCS1B01G309900 chr4A 91.250 160 14 0 3137 3296 736237401 736237560 5.540000e-53 219.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G309900 chr1B 532681478 532684773 3295 False 6087.000000 6087 100.000 1 3296 1 chr1B.!!$F3 3295
1 TraesCS1B01G309900 chr1B 31563076 31564049 973 True 1607.000000 1607 96.418 124 1100 1 chr1B.!!$R2 976
2 TraesCS1B01G309900 chr1B 357456791 357457741 950 True 1572.000000 1572 96.530 1159 2107 1 chr1B.!!$R4 948
3 TraesCS1B01G309900 chr1B 31540114 31541079 965 True 1517.000000 1517 94.882 124 1100 1 chr1B.!!$R1 976
4 TraesCS1B01G309900 chr1B 532545316 532548270 2954 False 337.466667 673 93.365 1101 3118 3 chr1B.!!$F4 2017
5 TraesCS1B01G309900 chr5D 63156447 63157423 976 False 1616.000000 1616 96.520 124 1100 1 chr5D.!!$F1 976
6 TraesCS1B01G309900 chr5D 507756673 507757523 850 False 1208.000000 1208 92.371 1159 2005 1 chr5D.!!$F3 846
7 TraesCS1B01G309900 chr5D 377316739 377317704 965 False 660.000000 660 79.029 133 1099 1 chr5D.!!$F2 966
8 TraesCS1B01G309900 chr7B 626048277 626049225 948 False 1559.000000 1559 96.324 1159 2107 1 chr7B.!!$F2 948
9 TraesCS1B01G309900 chr2D 100429631 100430551 920 False 1382.000000 1382 93.723 1159 2081 1 chr2D.!!$F1 922
10 TraesCS1B01G309900 chr2A 585194238 585195180 942 False 1365.000000 1365 92.744 1159 2108 1 chr2A.!!$F2 949
11 TraesCS1B01G309900 chr2A 595239472 595240393 921 False 1365.000000 1365 93.391 1161 2083 1 chr2A.!!$F3 922
12 TraesCS1B01G309900 chr2A 773371566 773372156 590 True 874.000000 874 93.401 512 1100 1 chr2A.!!$R1 588
13 TraesCS1B01G309900 chr1D 446734822 446735658 836 True 1358.000000 1358 95.943 124 961 1 chr1D.!!$R3 837
14 TraesCS1B01G309900 chr1D 397213764 397215891 2127 False 215.000000 320 90.317 2362 3129 2 chr1D.!!$F1 767
15 TraesCS1B01G309900 chr3A 725191880 725192787 907 True 1266.000000 1266 91.676 1159 2083 1 chr3A.!!$R3 924
16 TraesCS1B01G309900 chr6D 316424659 316425627 968 False 1242.000000 1242 89.794 132 1100 1 chr6D.!!$F1 968
17 TraesCS1B01G309900 chr1A 536340621 536341376 755 False 1203.000000 1203 95.376 124 880 1 chr1A.!!$F2 756
18 TraesCS1B01G309900 chr1A 494743572 494744478 906 False 211.000000 320 92.015 1101 2599 2 chr1A.!!$F4 1498
19 TraesCS1B01G309900 chr3B 133809051 133809956 905 True 1081.000000 1081 88.339 1161 2060 1 chr3B.!!$R2 899
20 TraesCS1B01G309900 chr4B 184611743 184612637 894 True 1070.000000 1070 88.248 1161 2060 1 chr4B.!!$R2 899
21 TraesCS1B01G309900 chr6B 508176599 508177313 714 True 891.000000 891 89.152 332 1049 1 chr6B.!!$R1 717

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
44 45 0.033699 GAGCAGAGGAGGGGCAATTT 60.034 55.0 0.00 0.0 0.00 1.82 F
45 46 0.033699 AGCAGAGGAGGGGCAATTTC 60.034 55.0 0.00 0.0 0.00 2.17 F
51 52 0.039618 GGAGGGGCAATTTCAGTCCA 59.960 55.0 0.00 0.0 30.51 4.02 F
77 78 0.250858 TGTGCCACCTCATGTCTTGG 60.251 55.0 0.00 0.0 0.00 3.61 F
2000 2023 0.038526 GCTGCGTATGGCCGTAGTAT 60.039 55.0 4.44 0.0 41.74 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1157 1170 0.033503 TCAGTATCCTCGAGGTGCCA 60.034 55.000 30.17 12.38 36.34 4.92 R
1556 1569 1.152546 TCGCTATCCTGCAGGGCTA 60.153 57.895 32.23 21.44 35.41 3.93 R
2000 2023 1.622607 CCAGATTGCAGTACGGGGGA 61.623 60.000 0.00 0.00 0.00 4.81 R
2014 2042 3.036429 GCCCTCCTGCGAACCAGAT 62.036 63.158 0.00 0.00 44.64 2.90 R
2867 7031 0.036952 ACGAGGACAATCAGTGGCTG 60.037 55.000 0.00 0.00 34.56 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.604065 GCACATGCATGACAGTATGAG 57.396 47.619 32.75 11.00 38.93 2.90
28 29 2.286831 GCACATGCATGACAGTATGAGC 60.287 50.000 32.75 16.08 39.78 4.26
29 30 2.940410 CACATGCATGACAGTATGAGCA 59.060 45.455 32.75 0.00 39.69 4.26
30 31 3.002348 CACATGCATGACAGTATGAGCAG 59.998 47.826 32.75 1.29 39.69 4.24
31 32 3.118519 ACATGCATGACAGTATGAGCAGA 60.119 43.478 32.75 0.00 39.69 4.26
32 33 3.175109 TGCATGACAGTATGAGCAGAG 57.825 47.619 0.00 0.00 39.69 3.35
33 34 2.159000 TGCATGACAGTATGAGCAGAGG 60.159 50.000 0.00 0.00 39.69 3.69
34 35 2.102084 GCATGACAGTATGAGCAGAGGA 59.898 50.000 0.00 0.00 39.69 3.71
35 36 3.799574 GCATGACAGTATGAGCAGAGGAG 60.800 52.174 0.00 0.00 39.69 3.69
36 37 2.382882 TGACAGTATGAGCAGAGGAGG 58.617 52.381 0.00 0.00 39.69 4.30
37 38 1.686052 GACAGTATGAGCAGAGGAGGG 59.314 57.143 0.00 0.00 39.69 4.30
38 39 1.047002 CAGTATGAGCAGAGGAGGGG 58.953 60.000 0.00 0.00 39.69 4.79
39 40 0.762461 AGTATGAGCAGAGGAGGGGC 60.762 60.000 0.00 0.00 0.00 5.80
40 41 1.050988 GTATGAGCAGAGGAGGGGCA 61.051 60.000 0.00 0.00 0.00 5.36
41 42 0.326522 TATGAGCAGAGGAGGGGCAA 60.327 55.000 0.00 0.00 0.00 4.52
42 43 0.992431 ATGAGCAGAGGAGGGGCAAT 60.992 55.000 0.00 0.00 0.00 3.56
43 44 1.210204 TGAGCAGAGGAGGGGCAATT 61.210 55.000 0.00 0.00 0.00 2.32
44 45 0.033699 GAGCAGAGGAGGGGCAATTT 60.034 55.000 0.00 0.00 0.00 1.82
45 46 0.033699 AGCAGAGGAGGGGCAATTTC 60.034 55.000 0.00 0.00 0.00 2.17
46 47 0.323725 GCAGAGGAGGGGCAATTTCA 60.324 55.000 0.00 0.00 0.00 2.69
47 48 1.760192 CAGAGGAGGGGCAATTTCAG 58.240 55.000 0.00 0.00 0.00 3.02
48 49 1.005215 CAGAGGAGGGGCAATTTCAGT 59.995 52.381 0.00 0.00 0.00 3.41
49 50 1.283321 AGAGGAGGGGCAATTTCAGTC 59.717 52.381 0.00 0.00 0.00 3.51
50 51 0.332972 AGGAGGGGCAATTTCAGTCC 59.667 55.000 0.00 0.00 0.00 3.85
51 52 0.039618 GGAGGGGCAATTTCAGTCCA 59.960 55.000 0.00 0.00 30.51 4.02
52 53 1.549950 GGAGGGGCAATTTCAGTCCAA 60.550 52.381 0.00 0.00 30.51 3.53
53 54 2.247358 GAGGGGCAATTTCAGTCCAAA 58.753 47.619 0.00 0.00 30.51 3.28
54 55 2.833943 GAGGGGCAATTTCAGTCCAAAT 59.166 45.455 0.00 0.00 30.51 2.32
55 56 4.023291 GAGGGGCAATTTCAGTCCAAATA 58.977 43.478 0.00 0.00 30.51 1.40
56 57 4.424842 AGGGGCAATTTCAGTCCAAATAA 58.575 39.130 0.00 0.00 30.51 1.40
57 58 4.843516 AGGGGCAATTTCAGTCCAAATAAA 59.156 37.500 0.00 0.00 30.51 1.40
58 59 5.488561 AGGGGCAATTTCAGTCCAAATAAAT 59.511 36.000 0.00 0.00 30.51 1.40
59 60 5.585844 GGGGCAATTTCAGTCCAAATAAATG 59.414 40.000 0.00 0.00 30.51 2.32
60 61 6.172630 GGGCAATTTCAGTCCAAATAAATGT 58.827 36.000 0.00 0.00 0.00 2.71
61 62 6.092533 GGGCAATTTCAGTCCAAATAAATGTG 59.907 38.462 0.00 0.00 0.00 3.21
62 63 6.402442 GGCAATTTCAGTCCAAATAAATGTGC 60.402 38.462 0.00 0.00 31.76 4.57
63 64 6.402442 GCAATTTCAGTCCAAATAAATGTGCC 60.402 38.462 0.00 0.00 0.00 5.01
64 65 5.798125 TTTCAGTCCAAATAAATGTGCCA 57.202 34.783 0.00 0.00 0.00 4.92
65 66 4.782019 TCAGTCCAAATAAATGTGCCAC 57.218 40.909 0.00 0.00 0.00 5.01
66 67 3.509575 TCAGTCCAAATAAATGTGCCACC 59.490 43.478 0.00 0.00 0.00 4.61
67 68 3.511146 CAGTCCAAATAAATGTGCCACCT 59.489 43.478 0.00 0.00 0.00 4.00
68 69 3.763897 AGTCCAAATAAATGTGCCACCTC 59.236 43.478 0.00 0.00 0.00 3.85
69 70 3.509575 GTCCAAATAAATGTGCCACCTCA 59.490 43.478 0.00 0.00 0.00 3.86
70 71 4.160252 GTCCAAATAAATGTGCCACCTCAT 59.840 41.667 0.00 0.00 0.00 2.90
71 72 4.160065 TCCAAATAAATGTGCCACCTCATG 59.840 41.667 0.00 0.00 0.00 3.07
72 73 4.081531 CCAAATAAATGTGCCACCTCATGT 60.082 41.667 0.00 0.00 0.00 3.21
73 74 4.989279 AATAAATGTGCCACCTCATGTC 57.011 40.909 0.00 0.00 0.00 3.06
74 75 2.592102 AAATGTGCCACCTCATGTCT 57.408 45.000 0.00 0.00 0.00 3.41
75 76 2.592102 AATGTGCCACCTCATGTCTT 57.408 45.000 0.00 0.00 0.00 3.01
76 77 1.830279 ATGTGCCACCTCATGTCTTG 58.170 50.000 0.00 0.00 0.00 3.02
77 78 0.250858 TGTGCCACCTCATGTCTTGG 60.251 55.000 0.00 0.00 0.00 3.61
78 79 0.250901 GTGCCACCTCATGTCTTGGT 60.251 55.000 9.85 4.52 33.87 3.67
79 80 1.003118 GTGCCACCTCATGTCTTGGTA 59.997 52.381 9.85 4.23 32.13 3.25
80 81 1.915489 TGCCACCTCATGTCTTGGTAT 59.085 47.619 9.85 0.00 32.13 2.73
81 82 3.111484 TGCCACCTCATGTCTTGGTATA 58.889 45.455 9.85 0.00 32.13 1.47
82 83 3.521531 TGCCACCTCATGTCTTGGTATAA 59.478 43.478 9.85 0.00 32.13 0.98
83 84 4.130118 GCCACCTCATGTCTTGGTATAAG 58.870 47.826 9.85 0.00 32.13 1.73
84 85 4.384208 GCCACCTCATGTCTTGGTATAAGT 60.384 45.833 9.85 0.00 32.13 2.24
85 86 5.118990 CCACCTCATGTCTTGGTATAAGTG 58.881 45.833 0.00 0.00 32.13 3.16
86 87 4.572389 CACCTCATGTCTTGGTATAAGTGC 59.428 45.833 0.00 0.00 32.13 4.40
87 88 4.471386 ACCTCATGTCTTGGTATAAGTGCT 59.529 41.667 0.00 0.00 31.50 4.40
88 89 5.661312 ACCTCATGTCTTGGTATAAGTGCTA 59.339 40.000 0.00 0.00 31.50 3.49
89 90 5.986135 CCTCATGTCTTGGTATAAGTGCTAC 59.014 44.000 0.00 0.00 0.00 3.58
90 91 5.914033 TCATGTCTTGGTATAAGTGCTACC 58.086 41.667 0.00 0.00 39.31 3.18
91 92 5.423931 TCATGTCTTGGTATAAGTGCTACCA 59.576 40.000 0.00 0.00 45.32 3.25
97 98 4.839121 TGGTATAAGTGCTACCAACAAGG 58.161 43.478 0.00 0.00 44.32 3.61
98 99 3.626217 GGTATAAGTGCTACCAACAAGGC 59.374 47.826 0.00 0.00 43.14 4.35
99 100 1.803334 TAAGTGCTACCAACAAGGCG 58.197 50.000 0.00 0.00 43.14 5.52
100 101 1.515521 AAGTGCTACCAACAAGGCGC 61.516 55.000 0.00 0.00 43.14 6.53
101 102 2.112087 TGCTACCAACAAGGCGCA 59.888 55.556 10.83 0.00 42.65 6.09
102 103 2.258013 TGCTACCAACAAGGCGCAC 61.258 57.895 10.83 0.00 40.79 5.34
103 104 1.966451 GCTACCAACAAGGCGCACT 60.966 57.895 10.83 0.02 43.14 4.40
104 105 0.672401 GCTACCAACAAGGCGCACTA 60.672 55.000 10.83 0.00 43.14 2.74
105 106 2.012051 GCTACCAACAAGGCGCACTAT 61.012 52.381 10.83 0.00 43.14 2.12
106 107 2.740580 GCTACCAACAAGGCGCACTATA 60.741 50.000 10.83 0.00 43.14 1.31
107 108 2.483014 ACCAACAAGGCGCACTATAA 57.517 45.000 10.83 0.00 43.14 0.98
108 109 2.785562 ACCAACAAGGCGCACTATAAA 58.214 42.857 10.83 0.00 43.14 1.40
109 110 3.150767 ACCAACAAGGCGCACTATAAAA 58.849 40.909 10.83 0.00 43.14 1.52
110 111 3.570550 ACCAACAAGGCGCACTATAAAAA 59.429 39.130 10.83 0.00 43.14 1.94
346 355 8.089597 TGTCGGTATAACTTGTTTTGATCAGTA 58.910 33.333 0.00 0.00 0.00 2.74
539 549 6.126409 ACAGTAAATTGTCCAGACTTTTCCA 58.874 36.000 0.00 0.00 0.00 3.53
761 771 2.238847 ATCACGCCATGTACGCACCT 62.239 55.000 5.38 0.00 0.00 4.00
843 853 6.605594 TCAATACCTTTCCAAACAACTGAAGT 59.394 34.615 0.00 0.00 0.00 3.01
866 877 2.088950 ACCTGAAAATACCGTGTCCG 57.911 50.000 0.00 0.00 0.00 4.79
925 937 1.671850 CGAGCACACAAACTATCCGGT 60.672 52.381 0.00 0.00 0.00 5.28
1156 1169 6.423182 CAACTTTTGGGAGGGTAAGATATGA 58.577 40.000 0.00 0.00 0.00 2.15
1157 1170 6.848562 ACTTTTGGGAGGGTAAGATATGAT 57.151 37.500 0.00 0.00 0.00 2.45
1309 1322 1.987855 GGAGACCATCCGGGACACA 60.988 63.158 0.00 0.00 38.67 3.72
1345 1358 2.598787 CGCCCTGTTGGAACCCCTA 61.599 63.158 0.00 0.00 35.39 3.53
1636 1658 0.944311 ACTTAACACAGACGGCAGCG 60.944 55.000 0.00 0.00 0.00 5.18
1746 1768 1.079543 ATGTGAGAGTGCGCTGGAC 60.080 57.895 3.44 0.00 0.00 4.02
1827 1850 6.270695 TGCCTATCATTGTTGAGATGGATAGA 59.729 38.462 0.00 0.00 34.73 1.98
1939 1962 6.098409 CCTTGAGGCTAGAGAGGTTGTATTTA 59.902 42.308 0.00 0.00 0.00 1.40
2000 2023 0.038526 GCTGCGTATGGCCGTAGTAT 60.039 55.000 4.44 0.00 41.74 2.12
2014 2042 2.034124 GTAGTATCCCCCGTACTGCAA 58.966 52.381 0.00 0.00 35.62 4.08
2075 2103 4.141482 GGTTATGGTTGAGATGCCTCCTTA 60.141 45.833 0.00 0.00 38.66 2.69
2085 2113 5.608437 TGAGATGCCTCCTTAAGTAATGGAT 59.392 40.000 0.97 0.00 38.66 3.41
2175 2203 1.546029 GAGGGATGTTTTTGTCTGCCC 59.454 52.381 0.00 0.00 0.00 5.36
2240 2590 1.022451 TGGCGACCGTTAATTCCAGC 61.022 55.000 0.00 0.00 0.00 4.85
2309 2661 7.148069 GGTGGTTATTAAAGCAGTAGCAATTCT 60.148 37.037 0.00 0.00 43.41 2.40
2378 2775 2.277756 GTAGCCGAGCGTACACCG 60.278 66.667 0.00 0.00 40.40 4.94
2442 4438 6.937465 ACAAAATTGTGTTACTGGTGGTTTTT 59.063 30.769 0.00 0.00 40.49 1.94
2599 6740 1.134788 GTGCCAGGTGCGAGTAGTAAT 60.135 52.381 0.00 0.00 45.60 1.89
2600 6741 2.100252 GTGCCAGGTGCGAGTAGTAATA 59.900 50.000 0.00 0.00 45.60 0.98
2601 6742 2.100252 TGCCAGGTGCGAGTAGTAATAC 59.900 50.000 0.00 0.00 45.60 1.89
2602 6743 2.361438 GCCAGGTGCGAGTAGTAATACT 59.639 50.000 1.76 1.76 0.00 2.12
2603 6744 3.550436 GCCAGGTGCGAGTAGTAATACTC 60.550 52.174 18.25 18.25 42.18 2.59
2604 6745 3.004524 CCAGGTGCGAGTAGTAATACTCC 59.995 52.174 21.29 15.25 42.52 3.85
2605 6746 3.004524 CAGGTGCGAGTAGTAATACTCCC 59.995 52.174 21.29 16.97 42.52 4.30
2606 6747 3.117587 AGGTGCGAGTAGTAATACTCCCT 60.118 47.826 21.29 18.60 42.52 4.20
2607 6748 3.252944 GGTGCGAGTAGTAATACTCCCTC 59.747 52.174 21.29 14.32 42.52 4.30
2608 6749 3.252944 GTGCGAGTAGTAATACTCCCTCC 59.747 52.174 21.29 10.15 42.52 4.30
2609 6750 2.483491 GCGAGTAGTAATACTCCCTCCG 59.517 54.545 21.29 12.82 42.52 4.63
2610 6751 3.737850 CGAGTAGTAATACTCCCTCCGT 58.262 50.000 21.29 0.00 42.52 4.69
2611 6752 4.133078 CGAGTAGTAATACTCCCTCCGTT 58.867 47.826 21.29 0.00 42.52 4.44
2612 6753 4.213059 CGAGTAGTAATACTCCCTCCGTTC 59.787 50.000 21.29 0.00 42.52 3.95
2613 6754 4.468713 AGTAGTAATACTCCCTCCGTTCC 58.531 47.826 0.00 0.00 0.00 3.62
2614 6755 3.393426 AGTAATACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
2615 6756 3.716431 AGTAATACTCCCTCCGTTCCAA 58.284 45.455 0.00 0.00 0.00 3.53
2616 6757 4.098894 AGTAATACTCCCTCCGTTCCAAA 58.901 43.478 0.00 0.00 0.00 3.28
2617 6758 4.533311 AGTAATACTCCCTCCGTTCCAAAA 59.467 41.667 0.00 0.00 0.00 2.44
2618 6759 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
2619 6760 5.703730 AATACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
2620 6761 5.906772 ATACTCCCTCCGTTCCAAAATAT 57.093 39.130 0.00 0.00 0.00 1.28
2621 6762 7.383156 AATACTCCCTCCGTTCCAAAATATA 57.617 36.000 0.00 0.00 0.00 0.86
2622 6763 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
2623 6764 4.065789 CTCCCTCCGTTCCAAAATATAGC 58.934 47.826 0.00 0.00 0.00 2.97
2624 6765 2.806244 CCCTCCGTTCCAAAATATAGCG 59.194 50.000 0.00 0.00 0.00 4.26
2625 6766 2.223377 CCTCCGTTCCAAAATATAGCGC 59.777 50.000 0.00 0.00 0.00 5.92
2626 6767 1.862201 TCCGTTCCAAAATATAGCGCG 59.138 47.619 0.00 0.00 0.00 6.86
2627 6768 1.595794 CCGTTCCAAAATATAGCGCGT 59.404 47.619 8.43 0.00 0.00 6.01
2628 6769 2.348218 CCGTTCCAAAATATAGCGCGTC 60.348 50.000 8.43 0.00 0.00 5.19
2629 6770 2.348218 CGTTCCAAAATATAGCGCGTCC 60.348 50.000 8.43 0.00 0.00 4.79
2630 6771 2.870411 GTTCCAAAATATAGCGCGTCCT 59.130 45.455 8.43 0.00 0.00 3.85
2631 6772 2.750948 TCCAAAATATAGCGCGTCCTC 58.249 47.619 8.43 0.00 0.00 3.71
2632 6773 1.455786 CCAAAATATAGCGCGTCCTCG 59.544 52.381 8.43 0.00 40.37 4.63
2633 6774 1.455786 CAAAATATAGCGCGTCCTCGG 59.544 52.381 8.43 0.00 37.56 4.63
2634 6775 0.672342 AAATATAGCGCGTCCTCGGT 59.328 50.000 8.43 0.00 43.07 4.69
2635 6776 0.672342 AATATAGCGCGTCCTCGGTT 59.328 50.000 8.43 0.00 40.82 4.44
2636 6777 0.672342 ATATAGCGCGTCCTCGGTTT 59.328 50.000 8.43 0.00 40.82 3.27
2637 6778 0.457035 TATAGCGCGTCCTCGGTTTT 59.543 50.000 8.43 0.00 40.82 2.43
2638 6779 0.804933 ATAGCGCGTCCTCGGTTTTC 60.805 55.000 8.43 0.00 40.82 2.29
2639 6780 4.130281 GCGCGTCCTCGGTTTTCG 62.130 66.667 8.43 0.00 40.90 3.46
2640 6781 2.732094 CGCGTCCTCGGTTTTCGT 60.732 61.111 0.00 0.00 40.32 3.85
2641 6782 2.851104 GCGTCCTCGGTTTTCGTG 59.149 61.111 0.00 0.00 40.32 4.35
2642 6783 2.851104 CGTCCTCGGTTTTCGTGC 59.149 61.111 0.00 0.00 40.32 5.34
2643 6784 1.663702 CGTCCTCGGTTTTCGTGCT 60.664 57.895 0.00 0.00 40.32 4.40
2644 6785 1.219522 CGTCCTCGGTTTTCGTGCTT 61.220 55.000 0.00 0.00 40.32 3.91
2645 6786 0.511653 GTCCTCGGTTTTCGTGCTTC 59.488 55.000 0.00 0.00 40.32 3.86
2646 6787 0.105224 TCCTCGGTTTTCGTGCTTCA 59.895 50.000 0.00 0.00 40.32 3.02
2647 6788 0.941542 CCTCGGTTTTCGTGCTTCAA 59.058 50.000 0.00 0.00 40.32 2.69
2648 6789 1.333791 CCTCGGTTTTCGTGCTTCAAC 60.334 52.381 0.00 0.00 40.32 3.18
2649 6790 1.597663 CTCGGTTTTCGTGCTTCAACT 59.402 47.619 0.00 0.00 40.32 3.16
2650 6791 2.011222 TCGGTTTTCGTGCTTCAACTT 58.989 42.857 0.00 0.00 40.32 2.66
2651 6792 2.420722 TCGGTTTTCGTGCTTCAACTTT 59.579 40.909 0.00 0.00 40.32 2.66
2652 6793 2.529894 CGGTTTTCGTGCTTCAACTTTG 59.470 45.455 0.00 0.00 0.00 2.77
2653 6794 3.729462 CGGTTTTCGTGCTTCAACTTTGA 60.729 43.478 0.00 0.00 34.92 2.69
2654 6795 3.546271 GGTTTTCGTGCTTCAACTTTGAC 59.454 43.478 0.00 0.00 36.83 3.18
2655 6796 3.414549 TTTCGTGCTTCAACTTTGACC 57.585 42.857 0.00 0.00 36.83 4.02
2656 6797 2.031258 TCGTGCTTCAACTTTGACCA 57.969 45.000 0.00 0.00 36.83 4.02
2657 6798 2.571212 TCGTGCTTCAACTTTGACCAT 58.429 42.857 0.00 0.00 36.83 3.55
2658 6799 2.948979 TCGTGCTTCAACTTTGACCATT 59.051 40.909 0.00 0.00 36.83 3.16
2659 6800 4.130857 TCGTGCTTCAACTTTGACCATTA 58.869 39.130 0.00 0.00 36.83 1.90
2660 6801 4.576873 TCGTGCTTCAACTTTGACCATTAA 59.423 37.500 0.00 0.00 36.83 1.40
2661 6802 5.240623 TCGTGCTTCAACTTTGACCATTAAT 59.759 36.000 0.00 0.00 36.83 1.40
2662 6803 5.920273 CGTGCTTCAACTTTGACCATTAATT 59.080 36.000 0.00 0.00 36.83 1.40
2663 6804 6.420604 CGTGCTTCAACTTTGACCATTAATTT 59.579 34.615 0.00 0.00 36.83 1.82
2664 6805 7.593273 CGTGCTTCAACTTTGACCATTAATTTA 59.407 33.333 0.00 0.00 36.83 1.40
2665 6806 9.255304 GTGCTTCAACTTTGACCATTAATTTAA 57.745 29.630 0.00 0.00 36.83 1.52
2666 6807 9.995003 TGCTTCAACTTTGACCATTAATTTAAT 57.005 25.926 0.00 0.00 36.83 1.40
2676 6817 9.921637 TTGACCATTAATTTAATCAACAAGACC 57.078 29.630 0.00 0.00 0.00 3.85
2677 6818 8.240682 TGACCATTAATTTAATCAACAAGACCG 58.759 33.333 0.00 0.00 0.00 4.79
2678 6819 8.343168 ACCATTAATTTAATCAACAAGACCGA 57.657 30.769 0.00 0.00 0.00 4.69
2679 6820 8.241367 ACCATTAATTTAATCAACAAGACCGAC 58.759 33.333 0.00 0.00 0.00 4.79
2680 6821 8.458843 CCATTAATTTAATCAACAAGACCGACT 58.541 33.333 0.00 0.00 0.00 4.18
2681 6822 9.277565 CATTAATTTAATCAACAAGACCGACTG 57.722 33.333 0.00 0.00 0.00 3.51
2682 6823 4.742438 TTTAATCAACAAGACCGACTGC 57.258 40.909 0.00 0.00 0.00 4.40
2683 6824 1.148310 AATCAACAAGACCGACTGCG 58.852 50.000 0.00 0.00 37.24 5.18
2758 6899 7.825331 TTATATAATTTTTGATCCCACCGCA 57.175 32.000 0.00 0.00 0.00 5.69
2759 6900 4.654091 ATAATTTTTGATCCCACCGCAG 57.346 40.909 0.00 0.00 0.00 5.18
2760 6901 1.923356 ATTTTTGATCCCACCGCAGT 58.077 45.000 0.00 0.00 0.00 4.40
2761 6902 1.243902 TTTTTGATCCCACCGCAGTC 58.756 50.000 0.00 0.00 0.00 3.51
2762 6903 0.953471 TTTTGATCCCACCGCAGTCG 60.953 55.000 0.00 0.00 0.00 4.18
2772 6913 4.778415 CGCAGTCGGTCTCGTGGG 62.778 72.222 0.00 0.00 37.69 4.61
2773 6914 3.681835 GCAGTCGGTCTCGTGGGT 61.682 66.667 0.00 0.00 37.69 4.51
2774 6915 3.048602 CAGTCGGTCTCGTGGGTT 58.951 61.111 0.00 0.00 37.69 4.11
2775 6916 1.870055 GCAGTCGGTCTCGTGGGTTA 61.870 60.000 0.00 0.00 37.69 2.85
2776 6917 0.599558 CAGTCGGTCTCGTGGGTTAA 59.400 55.000 0.00 0.00 37.69 2.01
2777 6918 1.000060 CAGTCGGTCTCGTGGGTTAAA 60.000 52.381 0.00 0.00 37.69 1.52
2778 6919 1.897802 AGTCGGTCTCGTGGGTTAAAT 59.102 47.619 0.00 0.00 37.69 1.40
2779 6920 2.301009 AGTCGGTCTCGTGGGTTAAATT 59.699 45.455 0.00 0.00 37.69 1.82
2780 6921 3.069289 GTCGGTCTCGTGGGTTAAATTT 58.931 45.455 0.00 0.00 37.69 1.82
2781 6922 4.021192 AGTCGGTCTCGTGGGTTAAATTTA 60.021 41.667 0.00 0.00 37.69 1.40
2782 6923 4.872124 GTCGGTCTCGTGGGTTAAATTTAT 59.128 41.667 0.00 0.00 37.69 1.40
2783 6924 4.871557 TCGGTCTCGTGGGTTAAATTTATG 59.128 41.667 0.00 0.00 37.69 1.90
2784 6925 4.034742 CGGTCTCGTGGGTTAAATTTATGG 59.965 45.833 0.00 0.00 0.00 2.74
2785 6926 4.945543 GGTCTCGTGGGTTAAATTTATGGT 59.054 41.667 0.00 0.00 0.00 3.55
2786 6927 5.065602 GGTCTCGTGGGTTAAATTTATGGTC 59.934 44.000 0.00 0.00 0.00 4.02
2787 6928 5.644636 GTCTCGTGGGTTAAATTTATGGTCA 59.355 40.000 0.00 0.00 0.00 4.02
2788 6929 6.149807 GTCTCGTGGGTTAAATTTATGGTCAA 59.850 38.462 0.00 0.00 0.00 3.18
2789 6930 6.715718 TCTCGTGGGTTAAATTTATGGTCAAA 59.284 34.615 0.00 0.00 0.00 2.69
2790 6931 6.915349 TCGTGGGTTAAATTTATGGTCAAAG 58.085 36.000 0.00 0.00 0.00 2.77
2791 6932 6.490721 TCGTGGGTTAAATTTATGGTCAAAGT 59.509 34.615 0.00 0.00 0.00 2.66
2792 6933 7.014422 TCGTGGGTTAAATTTATGGTCAAAGTT 59.986 33.333 0.00 0.00 31.36 2.66
2793 6934 7.115663 CGTGGGTTAAATTTATGGTCAAAGTTG 59.884 37.037 0.00 0.00 29.44 3.16
2794 6935 8.145122 GTGGGTTAAATTTATGGTCAAAGTTGA 58.855 33.333 0.00 0.00 34.20 3.18
2795 6936 8.705594 TGGGTTAAATTTATGGTCAAAGTTGAA 58.294 29.630 0.00 0.00 39.21 2.69
2796 6937 8.984764 GGGTTAAATTTATGGTCAAAGTTGAAC 58.015 33.333 1.98 1.98 45.04 3.18
2797 6938 8.984764 GGTTAAATTTATGGTCAAAGTTGAACC 58.015 33.333 6.62 6.25 44.20 3.62
2798 6939 9.758651 GTTAAATTTATGGTCAAAGTTGAACCT 57.241 29.630 6.62 0.00 44.20 3.50
2799 6940 9.974980 TTAAATTTATGGTCAAAGTTGAACCTC 57.025 29.630 6.62 0.00 44.20 3.85
2800 6941 5.682943 TTTATGGTCAAAGTTGAACCTCG 57.317 39.130 6.62 0.00 44.20 4.63
2801 6942 2.992124 TGGTCAAAGTTGAACCTCGA 57.008 45.000 6.62 0.00 44.20 4.04
2802 6943 3.269538 TGGTCAAAGTTGAACCTCGAA 57.730 42.857 6.62 0.00 44.20 3.71
2803 6944 3.611970 TGGTCAAAGTTGAACCTCGAAA 58.388 40.909 6.62 0.00 44.20 3.46
2804 6945 4.204012 TGGTCAAAGTTGAACCTCGAAAT 58.796 39.130 6.62 0.00 44.20 2.17
2805 6946 4.036262 TGGTCAAAGTTGAACCTCGAAATG 59.964 41.667 6.62 0.00 44.20 2.32
2806 6947 3.975035 GTCAAAGTTGAACCTCGAAATGC 59.025 43.478 0.00 0.00 39.21 3.56
2807 6948 2.969443 AAGTTGAACCTCGAAATGCG 57.031 45.000 0.00 0.00 42.69 4.73
2808 6949 1.878953 AGTTGAACCTCGAAATGCGT 58.121 45.000 0.00 0.00 41.80 5.24
2809 6950 1.531149 AGTTGAACCTCGAAATGCGTG 59.469 47.619 0.00 0.00 41.80 5.34
2813 6954 3.864686 CCTCGAAATGCGTGGGCG 61.865 66.667 0.00 0.00 46.89 6.13
2823 6964 3.637714 CGTGGGCGCGCTATATTT 58.362 55.556 32.29 0.00 0.00 1.40
2824 6965 1.938861 CGTGGGCGCGCTATATTTT 59.061 52.632 32.29 0.00 0.00 1.82
2825 6966 0.384230 CGTGGGCGCGCTATATTTTG 60.384 55.000 32.29 9.06 0.00 2.44
2826 6967 0.040425 GTGGGCGCGCTATATTTTGG 60.040 55.000 32.29 0.00 0.00 3.28
2827 6968 0.179043 TGGGCGCGCTATATTTTGGA 60.179 50.000 32.29 0.00 0.00 3.53
2828 6969 0.948678 GGGCGCGCTATATTTTGGAA 59.051 50.000 32.29 0.00 0.00 3.53
2829 6970 1.334689 GGGCGCGCTATATTTTGGAAC 60.335 52.381 32.29 8.93 0.00 3.62
2830 6971 1.658968 GCGCGCTATATTTTGGAACG 58.341 50.000 26.67 0.00 0.00 3.95
2831 6972 1.659211 GCGCGCTATATTTTGGAACGG 60.659 52.381 26.67 0.00 0.00 4.44
2832 6973 1.862201 CGCGCTATATTTTGGAACGGA 59.138 47.619 5.56 0.00 0.00 4.69
2833 6974 2.096909 CGCGCTATATTTTGGAACGGAG 60.097 50.000 5.56 0.00 0.00 4.63
2834 6975 2.223377 GCGCTATATTTTGGAACGGAGG 59.777 50.000 0.00 0.00 0.00 4.30
2835 6976 2.806244 CGCTATATTTTGGAACGGAGGG 59.194 50.000 0.00 0.00 0.00 4.30
2836 6977 3.493699 CGCTATATTTTGGAACGGAGGGA 60.494 47.826 0.00 0.00 0.00 4.20
2837 6978 4.065789 GCTATATTTTGGAACGGAGGGAG 58.934 47.826 0.00 0.00 0.00 4.30
2838 6979 4.444449 GCTATATTTTGGAACGGAGGGAGT 60.444 45.833 0.00 0.00 0.00 3.85
2867 7031 2.033141 TCCAGCTCTTGCACAGCC 59.967 61.111 12.35 0.00 42.74 4.85
2920 7091 2.003301 GAACGCTCTGAAATCCAGGAC 58.997 52.381 0.00 0.00 43.12 3.85
2935 7106 2.736682 GGACAACCAACGGATCGCG 61.737 63.158 0.00 0.00 35.97 5.87
2951 7122 2.256158 CGTGCGTCGGAACCTACA 59.744 61.111 0.00 0.00 35.71 2.74
2952 7123 1.153901 CGTGCGTCGGAACCTACAT 60.154 57.895 0.00 0.00 35.71 2.29
2953 7124 1.410737 CGTGCGTCGGAACCTACATG 61.411 60.000 0.00 0.00 35.71 3.21
2954 7125 1.447140 TGCGTCGGAACCTACATGC 60.447 57.895 0.00 0.00 0.00 4.06
2955 7126 2.171725 GCGTCGGAACCTACATGCC 61.172 63.158 0.00 0.00 0.00 4.40
2956 7127 1.520787 CGTCGGAACCTACATGCCC 60.521 63.158 0.00 0.00 0.00 5.36
2957 7128 1.600107 GTCGGAACCTACATGCCCA 59.400 57.895 0.00 0.00 0.00 5.36
3024 7195 7.309805 GCACCCTTGTTTATTAGGAAAATCACT 60.310 37.037 0.00 0.00 33.13 3.41
3122 7307 4.507388 ACGAGTCGAAGCTACACTATAGTC 59.493 45.833 21.50 0.00 0.00 2.59
3123 7308 4.507021 CGAGTCGAAGCTACACTATAGTCA 59.493 45.833 6.73 0.00 0.00 3.41
3128 7313 8.251721 AGTCGAAGCTACACTATAGTCATTTTT 58.748 33.333 1.26 0.00 0.00 1.94
3129 7314 8.321716 GTCGAAGCTACACTATAGTCATTTTTG 58.678 37.037 1.26 0.00 0.00 2.44
3130 7315 8.033038 TCGAAGCTACACTATAGTCATTTTTGT 58.967 33.333 1.26 0.00 0.00 2.83
3131 7316 8.656849 CGAAGCTACACTATAGTCATTTTTGTT 58.343 33.333 1.26 0.00 0.00 2.83
3161 7346 3.933861 TTCTAAAGGGAGGAAGCATCC 57.066 47.619 0.00 0.00 46.98 3.51
3169 7354 4.874528 GGAAGCATCCTCAGCCTC 57.125 61.111 0.00 0.00 42.93 4.70
3170 7355 2.219989 GGAAGCATCCTCAGCCTCT 58.780 57.895 0.00 0.00 42.93 3.69
3171 7356 0.179051 GGAAGCATCCTCAGCCTCTG 60.179 60.000 0.00 0.00 42.93 3.35
3172 7357 0.540923 GAAGCATCCTCAGCCTCTGT 59.459 55.000 0.00 0.00 32.61 3.41
3173 7358 1.759445 GAAGCATCCTCAGCCTCTGTA 59.241 52.381 0.00 0.00 32.61 2.74
3174 7359 2.100128 AGCATCCTCAGCCTCTGTAT 57.900 50.000 0.00 0.00 32.61 2.29
3175 7360 1.969923 AGCATCCTCAGCCTCTGTATC 59.030 52.381 0.00 0.00 32.61 2.24
3176 7361 1.969923 GCATCCTCAGCCTCTGTATCT 59.030 52.381 0.00 0.00 32.61 1.98
3177 7362 2.288948 GCATCCTCAGCCTCTGTATCTG 60.289 54.545 0.00 0.00 32.61 2.90
3178 7363 2.079170 TCCTCAGCCTCTGTATCTGG 57.921 55.000 0.00 0.00 32.61 3.86
3179 7364 1.570979 TCCTCAGCCTCTGTATCTGGA 59.429 52.381 0.00 0.00 32.61 3.86
3180 7365 2.178764 TCCTCAGCCTCTGTATCTGGAT 59.821 50.000 0.00 0.00 32.61 3.41
3181 7366 3.399305 TCCTCAGCCTCTGTATCTGGATA 59.601 47.826 0.00 0.00 32.61 2.59
3182 7367 4.140924 TCCTCAGCCTCTGTATCTGGATAA 60.141 45.833 0.00 0.00 32.61 1.75
3183 7368 4.776837 CCTCAGCCTCTGTATCTGGATAAT 59.223 45.833 0.00 0.00 32.61 1.28
3184 7369 5.337410 CCTCAGCCTCTGTATCTGGATAATG 60.337 48.000 0.00 0.00 32.61 1.90
3185 7370 4.020751 TCAGCCTCTGTATCTGGATAATGC 60.021 45.833 0.00 0.00 32.61 3.56
3186 7371 3.906218 AGCCTCTGTATCTGGATAATGCA 59.094 43.478 0.00 0.00 0.00 3.96
3187 7372 4.535294 AGCCTCTGTATCTGGATAATGCAT 59.465 41.667 0.00 0.00 0.00 3.96
3188 7373 5.723405 AGCCTCTGTATCTGGATAATGCATA 59.277 40.000 0.00 0.00 0.00 3.14
3189 7374 5.814705 GCCTCTGTATCTGGATAATGCATAC 59.185 44.000 0.00 0.00 0.00 2.39
3190 7375 6.038985 CCTCTGTATCTGGATAATGCATACG 58.961 44.000 0.00 0.00 0.00 3.06
3191 7376 5.965922 TCTGTATCTGGATAATGCATACGG 58.034 41.667 0.00 0.00 0.00 4.02
3192 7377 5.480422 TCTGTATCTGGATAATGCATACGGT 59.520 40.000 0.00 0.00 31.07 4.83
3193 7378 5.720202 TGTATCTGGATAATGCATACGGTC 58.280 41.667 0.00 0.00 0.00 4.79
3194 7379 4.890158 ATCTGGATAATGCATACGGTCA 57.110 40.909 0.00 0.00 0.00 4.02
3195 7380 3.990092 TCTGGATAATGCATACGGTCAC 58.010 45.455 0.00 0.00 0.00 3.67
3196 7381 3.641436 TCTGGATAATGCATACGGTCACT 59.359 43.478 0.00 0.00 0.00 3.41
3197 7382 4.100963 TCTGGATAATGCATACGGTCACTT 59.899 41.667 0.00 0.00 0.00 3.16
3198 7383 4.776349 TGGATAATGCATACGGTCACTTT 58.224 39.130 0.00 0.00 0.00 2.66
3199 7384 5.919755 TGGATAATGCATACGGTCACTTTA 58.080 37.500 0.00 0.00 0.00 1.85
3200 7385 6.530120 TGGATAATGCATACGGTCACTTTAT 58.470 36.000 0.00 0.00 0.00 1.40
3201 7386 6.995686 TGGATAATGCATACGGTCACTTTATT 59.004 34.615 0.00 0.00 0.00 1.40
3202 7387 8.151596 TGGATAATGCATACGGTCACTTTATTA 58.848 33.333 0.00 0.00 0.00 0.98
3203 7388 8.995220 GGATAATGCATACGGTCACTTTATTAA 58.005 33.333 0.00 0.00 0.00 1.40
3230 7415 9.959749 TTATTAAGCACAAAAGACCTTACAAAG 57.040 29.630 0.00 0.00 0.00 2.77
3231 7416 5.914898 AAGCACAAAAGACCTTACAAAGT 57.085 34.783 0.00 0.00 0.00 2.66
3232 7417 8.508883 TTAAGCACAAAAGACCTTACAAAGTA 57.491 30.769 0.00 0.00 0.00 2.24
3233 7418 6.619801 AGCACAAAAGACCTTACAAAGTAG 57.380 37.500 0.00 0.00 0.00 2.57
3234 7419 6.120220 AGCACAAAAGACCTTACAAAGTAGT 58.880 36.000 0.00 0.00 0.00 2.73
3235 7420 7.277396 AGCACAAAAGACCTTACAAAGTAGTA 58.723 34.615 0.00 0.00 0.00 1.82
3236 7421 7.226128 AGCACAAAAGACCTTACAAAGTAGTAC 59.774 37.037 0.00 0.00 0.00 2.73
3237 7422 7.011669 GCACAAAAGACCTTACAAAGTAGTACA 59.988 37.037 2.52 0.00 0.00 2.90
3238 7423 9.052759 CACAAAAGACCTTACAAAGTAGTACAT 57.947 33.333 2.52 0.00 0.00 2.29
3239 7424 9.269453 ACAAAAGACCTTACAAAGTAGTACATC 57.731 33.333 2.52 0.00 0.00 3.06
3240 7425 9.268268 CAAAAGACCTTACAAAGTAGTACATCA 57.732 33.333 2.52 0.00 0.00 3.07
3241 7426 9.490379 AAAAGACCTTACAAAGTAGTACATCAG 57.510 33.333 2.52 0.00 0.00 2.90
3242 7427 7.778185 AGACCTTACAAAGTAGTACATCAGT 57.222 36.000 2.52 0.00 0.00 3.41
3243 7428 8.874744 AGACCTTACAAAGTAGTACATCAGTA 57.125 34.615 2.52 0.00 0.00 2.74
3244 7429 9.305555 AGACCTTACAAAGTAGTACATCAGTAA 57.694 33.333 2.52 5.52 30.67 2.24
3245 7430 9.570488 GACCTTACAAAGTAGTACATCAGTAAG 57.430 37.037 18.30 18.30 37.80 2.34
3246 7431 8.033626 ACCTTACAAAGTAGTACATCAGTAAGC 58.966 37.037 19.09 0.00 37.13 3.09
3247 7432 7.491696 CCTTACAAAGTAGTACATCAGTAAGCC 59.508 40.741 19.09 0.00 37.13 4.35
3248 7433 6.607004 ACAAAGTAGTACATCAGTAAGCCT 57.393 37.500 2.52 0.00 30.67 4.58
3249 7434 6.398918 ACAAAGTAGTACATCAGTAAGCCTG 58.601 40.000 2.52 0.00 42.97 4.85
3257 7442 2.859992 CAGTAAGCCTGAAGCCACC 58.140 57.895 0.00 0.00 44.49 4.61
3258 7443 0.036732 CAGTAAGCCTGAAGCCACCA 59.963 55.000 0.00 0.00 44.49 4.17
3259 7444 0.995024 AGTAAGCCTGAAGCCACCAT 59.005 50.000 0.00 0.00 45.47 3.55
3260 7445 1.065126 AGTAAGCCTGAAGCCACCATC 60.065 52.381 0.00 0.00 45.47 3.51
3261 7446 1.065126 GTAAGCCTGAAGCCACCATCT 60.065 52.381 0.00 0.00 45.47 2.90
3262 7447 1.289160 AAGCCTGAAGCCACCATCTA 58.711 50.000 0.00 0.00 45.47 1.98
3263 7448 0.835941 AGCCTGAAGCCACCATCTAG 59.164 55.000 0.00 0.00 45.47 2.43
3264 7449 0.179034 GCCTGAAGCCACCATCTAGG 60.179 60.000 0.00 0.00 38.57 3.02
3275 7460 5.083533 CCACCATCTAGGCAATATCTCTC 57.916 47.826 0.00 0.00 43.14 3.20
3276 7461 4.381398 CCACCATCTAGGCAATATCTCTCG 60.381 50.000 0.00 0.00 43.14 4.04
3277 7462 3.194542 ACCATCTAGGCAATATCTCTCGC 59.805 47.826 0.00 0.00 43.14 5.03
3278 7463 3.446873 CCATCTAGGCAATATCTCTCGCT 59.553 47.826 0.00 0.00 0.00 4.93
3279 7464 4.642437 CCATCTAGGCAATATCTCTCGCTA 59.358 45.833 0.00 0.00 0.00 4.26
3280 7465 5.301551 CCATCTAGGCAATATCTCTCGCTAT 59.698 44.000 0.00 0.00 0.00 2.97
3281 7466 6.183360 CCATCTAGGCAATATCTCTCGCTATT 60.183 42.308 0.00 0.00 0.00 1.73
3282 7467 6.443934 TCTAGGCAATATCTCTCGCTATTC 57.556 41.667 0.00 0.00 0.00 1.75
3283 7468 4.464069 AGGCAATATCTCTCGCTATTCC 57.536 45.455 0.00 0.00 0.00 3.01
3284 7469 4.093011 AGGCAATATCTCTCGCTATTCCT 58.907 43.478 0.00 0.00 0.00 3.36
3285 7470 5.265191 AGGCAATATCTCTCGCTATTCCTA 58.735 41.667 0.00 0.00 0.00 2.94
3286 7471 5.126384 AGGCAATATCTCTCGCTATTCCTAC 59.874 44.000 0.00 0.00 0.00 3.18
3287 7472 5.344884 GCAATATCTCTCGCTATTCCTACC 58.655 45.833 0.00 0.00 0.00 3.18
3288 7473 5.680151 GCAATATCTCTCGCTATTCCTACCC 60.680 48.000 0.00 0.00 0.00 3.69
3289 7474 2.289592 TCTCTCGCTATTCCTACCCC 57.710 55.000 0.00 0.00 0.00 4.95
3290 7475 1.203025 TCTCTCGCTATTCCTACCCCC 60.203 57.143 0.00 0.00 0.00 5.40
3291 7476 0.858369 TCTCGCTATTCCTACCCCCT 59.142 55.000 0.00 0.00 0.00 4.79
3292 7477 1.219724 TCTCGCTATTCCTACCCCCTT 59.780 52.381 0.00 0.00 0.00 3.95
3293 7478 1.344763 CTCGCTATTCCTACCCCCTTG 59.655 57.143 0.00 0.00 0.00 3.61
3294 7479 1.062734 TCGCTATTCCTACCCCCTTGA 60.063 52.381 0.00 0.00 0.00 3.02
3295 7480 1.978580 CGCTATTCCTACCCCCTTGAT 59.021 52.381 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.118519 TCTGCTCATACTGTCATGCATGT 60.119 43.478 25.43 9.58 0.00 3.21
10 11 3.463944 TCTGCTCATACTGTCATGCATG 58.536 45.455 21.07 21.07 0.00 4.06
11 12 3.494573 CCTCTGCTCATACTGTCATGCAT 60.495 47.826 0.00 0.00 0.00 3.96
12 13 2.159000 CCTCTGCTCATACTGTCATGCA 60.159 50.000 0.00 0.00 0.00 3.96
13 14 2.102084 TCCTCTGCTCATACTGTCATGC 59.898 50.000 0.00 0.00 0.00 4.06
14 15 3.243805 CCTCCTCTGCTCATACTGTCATG 60.244 52.174 0.00 0.00 0.00 3.07
15 16 2.964464 CCTCCTCTGCTCATACTGTCAT 59.036 50.000 0.00 0.00 0.00 3.06
16 17 2.382882 CCTCCTCTGCTCATACTGTCA 58.617 52.381 0.00 0.00 0.00 3.58
17 18 1.686052 CCCTCCTCTGCTCATACTGTC 59.314 57.143 0.00 0.00 0.00 3.51
18 19 1.690845 CCCCTCCTCTGCTCATACTGT 60.691 57.143 0.00 0.00 0.00 3.55
19 20 1.047002 CCCCTCCTCTGCTCATACTG 58.953 60.000 0.00 0.00 0.00 2.74
20 21 0.762461 GCCCCTCCTCTGCTCATACT 60.762 60.000 0.00 0.00 0.00 2.12
21 22 1.050988 TGCCCCTCCTCTGCTCATAC 61.051 60.000 0.00 0.00 0.00 2.39
22 23 0.326522 TTGCCCCTCCTCTGCTCATA 60.327 55.000 0.00 0.00 0.00 2.15
23 24 0.992431 ATTGCCCCTCCTCTGCTCAT 60.992 55.000 0.00 0.00 0.00 2.90
24 25 1.210204 AATTGCCCCTCCTCTGCTCA 61.210 55.000 0.00 0.00 0.00 4.26
25 26 0.033699 AAATTGCCCCTCCTCTGCTC 60.034 55.000 0.00 0.00 0.00 4.26
26 27 0.033699 GAAATTGCCCCTCCTCTGCT 60.034 55.000 0.00 0.00 0.00 4.24
27 28 0.323725 TGAAATTGCCCCTCCTCTGC 60.324 55.000 0.00 0.00 0.00 4.26
28 29 1.005215 ACTGAAATTGCCCCTCCTCTG 59.995 52.381 0.00 0.00 0.00 3.35
29 30 1.283321 GACTGAAATTGCCCCTCCTCT 59.717 52.381 0.00 0.00 0.00 3.69
30 31 1.683319 GGACTGAAATTGCCCCTCCTC 60.683 57.143 0.00 0.00 0.00 3.71
31 32 0.332972 GGACTGAAATTGCCCCTCCT 59.667 55.000 0.00 0.00 0.00 3.69
32 33 0.039618 TGGACTGAAATTGCCCCTCC 59.960 55.000 0.00 0.00 0.00 4.30
33 34 1.923356 TTGGACTGAAATTGCCCCTC 58.077 50.000 0.00 0.00 0.00 4.30
34 35 2.397044 TTTGGACTGAAATTGCCCCT 57.603 45.000 0.00 0.00 0.00 4.79
35 36 4.817318 TTATTTGGACTGAAATTGCCCC 57.183 40.909 0.00 0.00 0.00 5.80
36 37 6.092533 CACATTTATTTGGACTGAAATTGCCC 59.907 38.462 0.00 0.00 0.00 5.36
37 38 6.402442 GCACATTTATTTGGACTGAAATTGCC 60.402 38.462 0.00 0.00 0.00 4.52
38 39 6.402442 GGCACATTTATTTGGACTGAAATTGC 60.402 38.462 0.00 0.00 31.69 3.56
39 40 6.649973 TGGCACATTTATTTGGACTGAAATTG 59.350 34.615 0.00 0.00 0.00 2.32
40 41 6.650390 GTGGCACATTTATTTGGACTGAAATT 59.350 34.615 13.86 0.00 44.52 1.82
41 42 6.165577 GTGGCACATTTATTTGGACTGAAAT 58.834 36.000 13.86 0.00 44.52 2.17
42 43 5.510520 GGTGGCACATTTATTTGGACTGAAA 60.511 40.000 20.82 0.00 44.52 2.69
43 44 4.021544 GGTGGCACATTTATTTGGACTGAA 60.022 41.667 20.82 0.00 44.52 3.02
44 45 3.509575 GGTGGCACATTTATTTGGACTGA 59.490 43.478 20.82 0.00 44.52 3.41
45 46 3.511146 AGGTGGCACATTTATTTGGACTG 59.489 43.478 20.82 0.00 44.52 3.51
46 47 3.763897 GAGGTGGCACATTTATTTGGACT 59.236 43.478 20.82 1.94 44.52 3.85
47 48 3.509575 TGAGGTGGCACATTTATTTGGAC 59.490 43.478 20.82 0.00 44.52 4.02
48 49 3.772387 TGAGGTGGCACATTTATTTGGA 58.228 40.909 20.82 0.00 44.52 3.53
49 50 4.081531 ACATGAGGTGGCACATTTATTTGG 60.082 41.667 20.82 2.94 44.52 3.28
50 51 5.075858 ACATGAGGTGGCACATTTATTTG 57.924 39.130 20.82 9.22 44.52 2.32
51 52 5.018809 AGACATGAGGTGGCACATTTATTT 58.981 37.500 20.82 4.50 44.52 1.40
52 53 4.603131 AGACATGAGGTGGCACATTTATT 58.397 39.130 20.82 0.00 44.52 1.40
53 54 4.240881 AGACATGAGGTGGCACATTTAT 57.759 40.909 20.82 8.48 44.52 1.40
54 55 3.719268 AGACATGAGGTGGCACATTTA 57.281 42.857 20.82 6.30 44.52 1.40
55 56 2.559668 CAAGACATGAGGTGGCACATTT 59.440 45.455 20.82 3.94 44.52 2.32
56 57 2.165167 CAAGACATGAGGTGGCACATT 58.835 47.619 20.82 6.79 44.52 2.71
57 58 1.615116 CCAAGACATGAGGTGGCACAT 60.615 52.381 20.82 13.44 44.52 3.21
58 59 0.250858 CCAAGACATGAGGTGGCACA 60.251 55.000 20.82 0.00 38.81 4.57
59 60 0.250901 ACCAAGACATGAGGTGGCAC 60.251 55.000 9.70 9.70 38.81 5.01
60 61 1.357137 TACCAAGACATGAGGTGGCA 58.643 50.000 0.00 0.00 38.81 4.92
61 62 2.717639 ATACCAAGACATGAGGTGGC 57.282 50.000 0.00 0.00 36.87 5.01
62 63 5.118990 CACTTATACCAAGACATGAGGTGG 58.881 45.833 0.00 5.73 36.87 4.61
63 64 4.572389 GCACTTATACCAAGACATGAGGTG 59.428 45.833 0.00 0.00 36.87 4.00
64 65 4.471386 AGCACTTATACCAAGACATGAGGT 59.529 41.667 0.00 4.43 39.41 3.85
65 66 5.028549 AGCACTTATACCAAGACATGAGG 57.971 43.478 0.00 0.00 0.00 3.86
66 67 5.986135 GGTAGCACTTATACCAAGACATGAG 59.014 44.000 0.00 0.00 42.01 2.90
67 68 5.914033 GGTAGCACTTATACCAAGACATGA 58.086 41.667 0.00 0.00 42.01 3.07
76 77 3.626217 GCCTTGTTGGTAGCACTTATACC 59.374 47.826 0.00 0.00 42.62 2.73
77 78 3.308866 CGCCTTGTTGGTAGCACTTATAC 59.691 47.826 0.00 0.00 38.35 1.47
78 79 3.527533 CGCCTTGTTGGTAGCACTTATA 58.472 45.455 0.00 0.00 38.35 0.98
79 80 2.356135 CGCCTTGTTGGTAGCACTTAT 58.644 47.619 0.00 0.00 38.35 1.73
80 81 1.803334 CGCCTTGTTGGTAGCACTTA 58.197 50.000 0.00 0.00 38.35 2.24
81 82 1.515521 GCGCCTTGTTGGTAGCACTT 61.516 55.000 0.00 0.00 39.88 3.16
82 83 1.966451 GCGCCTTGTTGGTAGCACT 60.966 57.895 0.00 0.00 39.88 4.40
83 84 2.258013 TGCGCCTTGTTGGTAGCAC 61.258 57.895 4.18 0.00 42.96 4.40
84 85 2.112087 TGCGCCTTGTTGGTAGCA 59.888 55.556 4.18 0.00 44.55 3.49
85 86 0.672401 TAGTGCGCCTTGTTGGTAGC 60.672 55.000 4.18 0.00 40.29 3.58
86 87 2.024176 ATAGTGCGCCTTGTTGGTAG 57.976 50.000 4.18 0.00 38.35 3.18
87 88 3.613494 TTATAGTGCGCCTTGTTGGTA 57.387 42.857 4.18 0.00 38.35 3.25
88 89 2.483014 TTATAGTGCGCCTTGTTGGT 57.517 45.000 4.18 0.00 38.35 3.67
89 90 3.840890 TTTTATAGTGCGCCTTGTTGG 57.159 42.857 4.18 0.00 39.35 3.77
107 108 5.600669 AAGGTACTCCCTCCATTCTTTTT 57.399 39.130 0.00 0.00 45.47 1.94
108 109 6.910259 ATAAGGTACTCCCTCCATTCTTTT 57.090 37.500 0.00 0.00 45.47 2.27
109 110 6.910259 AATAAGGTACTCCCTCCATTCTTT 57.090 37.500 0.00 0.00 45.47 2.52
110 111 7.794683 TGATAATAAGGTACTCCCTCCATTCTT 59.205 37.037 0.00 0.00 45.47 2.52
111 112 7.235812 GTGATAATAAGGTACTCCCTCCATTCT 59.764 40.741 0.00 0.00 45.47 2.40
112 113 7.016268 TGTGATAATAAGGTACTCCCTCCATTC 59.984 40.741 0.00 0.00 45.47 2.67
113 114 6.849697 TGTGATAATAAGGTACTCCCTCCATT 59.150 38.462 0.00 0.00 45.47 3.16
114 115 6.390504 TGTGATAATAAGGTACTCCCTCCAT 58.609 40.000 0.00 0.00 45.47 3.41
115 116 5.784023 TGTGATAATAAGGTACTCCCTCCA 58.216 41.667 0.00 0.00 45.47 3.86
116 117 6.702329 CATGTGATAATAAGGTACTCCCTCC 58.298 44.000 0.00 0.00 45.47 4.30
117 118 6.166982 GCATGTGATAATAAGGTACTCCCTC 58.833 44.000 0.00 0.00 45.47 4.30
119 120 5.865085 TGCATGTGATAATAAGGTACTCCC 58.135 41.667 0.00 0.00 38.49 4.30
120 121 5.409826 GCTGCATGTGATAATAAGGTACTCC 59.590 44.000 0.00 0.00 38.49 3.85
121 122 5.991606 TGCTGCATGTGATAATAAGGTACTC 59.008 40.000 0.00 0.00 38.49 2.59
122 123 8.858048 GCTTGCTGCATGTGATAATAAGGTACT 61.858 40.741 15.71 0.00 41.33 2.73
298 307 7.042725 CGACATATTGGTACTACTGATTGTTGG 60.043 40.741 0.00 0.00 0.00 3.77
346 355 2.358003 GCGTCAGGTGCTCTTGCT 60.358 61.111 0.00 0.00 40.48 3.91
539 549 6.572314 CGGGAAGATTTTATTGCTTGGTTTCT 60.572 38.462 0.00 0.00 0.00 2.52
843 853 5.350633 CGGACACGGTATTTTCAGGTAATA 58.649 41.667 0.00 0.00 36.18 0.98
925 937 3.509575 AGGCTTGGCGATTAATTGAAACA 59.490 39.130 6.89 0.00 0.00 2.83
1156 1169 1.043816 CAGTATCCTCGAGGTGCCAT 58.956 55.000 30.17 18.65 36.34 4.40
1157 1170 0.033503 TCAGTATCCTCGAGGTGCCA 60.034 55.000 30.17 12.38 36.34 4.92
1345 1358 2.441164 AGCCTCGCCGTCTCATCT 60.441 61.111 0.00 0.00 0.00 2.90
1403 1416 4.035558 CGGTTTGTCATGGGTAATCTCATG 59.964 45.833 2.09 2.09 41.35 3.07
1556 1569 1.152546 TCGCTATCCTGCAGGGCTA 60.153 57.895 32.23 21.44 35.41 3.93
1636 1658 1.656441 CTCCTGTGGCTGCAACAAC 59.344 57.895 11.60 0.00 0.00 3.32
1902 1925 1.781786 CCTCAAGGGCTGCTAGACTA 58.218 55.000 0.00 0.00 0.00 2.59
1939 1962 2.686816 GCCAACGGCTACATTGCGT 61.687 57.895 0.00 0.00 46.69 5.24
2000 2023 1.622607 CCAGATTGCAGTACGGGGGA 61.623 60.000 0.00 0.00 0.00 4.81
2014 2042 3.036429 GCCCTCCTGCGAACCAGAT 62.036 63.158 0.00 0.00 44.64 2.90
2108 2136 6.128445 CGGCAATGAAGTACCATCATATCTTC 60.128 42.308 11.07 0.00 36.53 2.87
2109 2137 5.702670 CGGCAATGAAGTACCATCATATCTT 59.297 40.000 11.07 0.00 36.53 2.40
2110 2138 5.240891 CGGCAATGAAGTACCATCATATCT 58.759 41.667 11.07 0.00 36.53 1.98
2111 2139 4.393062 CCGGCAATGAAGTACCATCATATC 59.607 45.833 11.07 6.99 36.53 1.63
2112 2140 4.202461 ACCGGCAATGAAGTACCATCATAT 60.202 41.667 0.00 1.91 36.53 1.78
2113 2141 3.135712 ACCGGCAATGAAGTACCATCATA 59.864 43.478 0.00 0.00 36.53 2.15
2114 2142 2.092429 ACCGGCAATGAAGTACCATCAT 60.092 45.455 0.00 6.05 39.15 2.45
2115 2143 1.280710 ACCGGCAATGAAGTACCATCA 59.719 47.619 0.00 1.81 0.00 3.07
2116 2144 2.038387 ACCGGCAATGAAGTACCATC 57.962 50.000 0.00 0.00 0.00 3.51
2175 2203 0.672342 CTATGACCCCCGGTTCGTAG 59.328 60.000 0.00 5.32 35.25 3.51
2240 2590 4.022416 CCTCTAGTAGTCTGCAATAGCTGG 60.022 50.000 0.00 0.00 42.74 4.85
2309 2661 1.135699 GTCGGCGCGACGAAATAAGA 61.136 55.000 41.59 13.26 46.56 2.10
2442 4438 0.818296 GCCTTCGCCTCTTCTGAGTA 59.182 55.000 0.00 0.00 38.61 2.59
2472 4475 5.068591 ACTGTACCATTGGTTTCCACTTTTC 59.931 40.000 14.78 0.00 37.09 2.29
2497 4503 3.303229 CGTGTTGGAGTTTTTGAAAGTGC 59.697 43.478 0.00 0.00 0.00 4.40
2599 6740 5.221581 GCTATATTTTGGAACGGAGGGAGTA 60.222 44.000 0.00 0.00 0.00 2.59
2600 6741 4.444449 GCTATATTTTGGAACGGAGGGAGT 60.444 45.833 0.00 0.00 0.00 3.85
2601 6742 4.065789 GCTATATTTTGGAACGGAGGGAG 58.934 47.826 0.00 0.00 0.00 4.30
2602 6743 3.493699 CGCTATATTTTGGAACGGAGGGA 60.494 47.826 0.00 0.00 0.00 4.20
2603 6744 2.806244 CGCTATATTTTGGAACGGAGGG 59.194 50.000 0.00 0.00 0.00 4.30
2604 6745 2.223377 GCGCTATATTTTGGAACGGAGG 59.777 50.000 0.00 0.00 0.00 4.30
2605 6746 2.096909 CGCGCTATATTTTGGAACGGAG 60.097 50.000 5.56 0.00 0.00 4.63
2606 6747 1.862201 CGCGCTATATTTTGGAACGGA 59.138 47.619 5.56 0.00 0.00 4.69
2607 6748 1.595794 ACGCGCTATATTTTGGAACGG 59.404 47.619 5.73 0.00 0.00 4.44
2608 6749 2.348218 GGACGCGCTATATTTTGGAACG 60.348 50.000 5.73 0.00 0.00 3.95
2609 6750 2.870411 AGGACGCGCTATATTTTGGAAC 59.130 45.455 5.73 0.00 0.00 3.62
2610 6751 3.128349 GAGGACGCGCTATATTTTGGAA 58.872 45.455 5.73 0.00 0.00 3.53
2611 6752 2.750948 GAGGACGCGCTATATTTTGGA 58.249 47.619 5.73 0.00 0.00 3.53
2612 6753 1.455786 CGAGGACGCGCTATATTTTGG 59.544 52.381 5.73 0.00 0.00 3.28
2613 6754 1.455786 CCGAGGACGCGCTATATTTTG 59.544 52.381 5.73 0.00 38.29 2.44
2614 6755 1.068127 ACCGAGGACGCGCTATATTTT 59.932 47.619 5.73 0.00 38.29 1.82
2615 6756 0.672342 ACCGAGGACGCGCTATATTT 59.328 50.000 5.73 0.00 38.29 1.40
2616 6757 0.672342 AACCGAGGACGCGCTATATT 59.328 50.000 5.73 0.00 38.29 1.28
2617 6758 0.672342 AAACCGAGGACGCGCTATAT 59.328 50.000 5.73 0.00 38.29 0.86
2618 6759 0.457035 AAAACCGAGGACGCGCTATA 59.543 50.000 5.73 0.00 38.29 1.31
2619 6760 0.804933 GAAAACCGAGGACGCGCTAT 60.805 55.000 5.73 0.00 38.29 2.97
2620 6761 1.444895 GAAAACCGAGGACGCGCTA 60.445 57.895 5.73 0.00 38.29 4.26
2621 6762 2.737376 GAAAACCGAGGACGCGCT 60.737 61.111 5.73 0.00 38.29 5.92
2622 6763 4.130281 CGAAAACCGAGGACGCGC 62.130 66.667 5.73 0.00 41.76 6.86
2623 6764 2.732094 ACGAAAACCGAGGACGCG 60.732 61.111 3.53 3.53 41.76 6.01
2624 6765 2.851104 CACGAAAACCGAGGACGC 59.149 61.111 0.00 0.00 41.76 5.19
2625 6766 1.219522 AAGCACGAAAACCGAGGACG 61.220 55.000 0.00 0.00 41.76 4.79
2626 6767 0.511653 GAAGCACGAAAACCGAGGAC 59.488 55.000 0.00 0.00 41.76 3.85
2627 6768 0.105224 TGAAGCACGAAAACCGAGGA 59.895 50.000 0.00 0.00 41.76 3.71
2628 6769 0.941542 TTGAAGCACGAAAACCGAGG 59.058 50.000 0.00 0.00 41.76 4.63
2629 6770 1.597663 AGTTGAAGCACGAAAACCGAG 59.402 47.619 0.00 0.00 41.76 4.63
2630 6771 1.658994 AGTTGAAGCACGAAAACCGA 58.341 45.000 0.00 0.00 41.76 4.69
2631 6772 2.468532 AAGTTGAAGCACGAAAACCG 57.531 45.000 0.00 0.00 45.44 4.44
2632 6773 3.546271 GTCAAAGTTGAAGCACGAAAACC 59.454 43.478 0.00 0.00 39.21 3.27
2633 6774 3.546271 GGTCAAAGTTGAAGCACGAAAAC 59.454 43.478 0.00 0.00 39.21 2.43
2634 6775 3.191581 TGGTCAAAGTTGAAGCACGAAAA 59.808 39.130 0.00 0.00 39.21 2.29
2635 6776 2.750166 TGGTCAAAGTTGAAGCACGAAA 59.250 40.909 0.00 0.00 39.21 3.46
2636 6777 2.360844 TGGTCAAAGTTGAAGCACGAA 58.639 42.857 0.00 0.00 39.21 3.85
2637 6778 2.031258 TGGTCAAAGTTGAAGCACGA 57.969 45.000 0.00 0.00 39.21 4.35
2638 6779 3.354089 AATGGTCAAAGTTGAAGCACG 57.646 42.857 0.00 0.00 39.21 5.34
2639 6780 7.713764 AAATTAATGGTCAAAGTTGAAGCAC 57.286 32.000 0.00 0.00 39.21 4.40
2640 6781 9.995003 ATTAAATTAATGGTCAAAGTTGAAGCA 57.005 25.926 0.00 0.00 39.21 3.91
2650 6791 9.921637 GGTCTTGTTGATTAAATTAATGGTCAA 57.078 29.630 2.58 0.04 0.00 3.18
2651 6792 8.240682 CGGTCTTGTTGATTAAATTAATGGTCA 58.759 33.333 2.58 0.00 0.00 4.02
2652 6793 8.455682 TCGGTCTTGTTGATTAAATTAATGGTC 58.544 33.333 2.58 0.00 0.00 4.02
2653 6794 8.241367 GTCGGTCTTGTTGATTAAATTAATGGT 58.759 33.333 2.58 0.00 0.00 3.55
2654 6795 8.458843 AGTCGGTCTTGTTGATTAAATTAATGG 58.541 33.333 2.58 0.00 0.00 3.16
2655 6796 9.277565 CAGTCGGTCTTGTTGATTAAATTAATG 57.722 33.333 2.58 0.00 0.00 1.90
2656 6797 7.968405 GCAGTCGGTCTTGTTGATTAAATTAAT 59.032 33.333 0.00 0.00 0.00 1.40
2657 6798 7.302524 GCAGTCGGTCTTGTTGATTAAATTAA 58.697 34.615 0.00 0.00 0.00 1.40
2658 6799 6.401688 CGCAGTCGGTCTTGTTGATTAAATTA 60.402 38.462 0.00 0.00 0.00 1.40
2659 6800 5.616866 CGCAGTCGGTCTTGTTGATTAAATT 60.617 40.000 0.00 0.00 0.00 1.82
2660 6801 4.142902 CGCAGTCGGTCTTGTTGATTAAAT 60.143 41.667 0.00 0.00 0.00 1.40
2661 6802 3.185594 CGCAGTCGGTCTTGTTGATTAAA 59.814 43.478 0.00 0.00 0.00 1.52
2662 6803 2.734606 CGCAGTCGGTCTTGTTGATTAA 59.265 45.455 0.00 0.00 0.00 1.40
2663 6804 2.333926 CGCAGTCGGTCTTGTTGATTA 58.666 47.619 0.00 0.00 0.00 1.75
2664 6805 1.148310 CGCAGTCGGTCTTGTTGATT 58.852 50.000 0.00 0.00 0.00 2.57
2665 6806 2.827604 CGCAGTCGGTCTTGTTGAT 58.172 52.632 0.00 0.00 0.00 2.57
2666 6807 4.336581 CGCAGTCGGTCTTGTTGA 57.663 55.556 0.00 0.00 0.00 3.18
2732 6873 8.865090 TGCGGTGGGATCAAAAATTATATAATT 58.135 29.630 13.85 13.85 37.49 1.40
2733 6874 8.415950 TGCGGTGGGATCAAAAATTATATAAT 57.584 30.769 1.91 1.91 0.00 1.28
2734 6875 7.504238 ACTGCGGTGGGATCAAAAATTATATAA 59.496 33.333 0.00 0.00 0.00 0.98
2735 6876 7.001674 ACTGCGGTGGGATCAAAAATTATATA 58.998 34.615 0.00 0.00 0.00 0.86
2736 6877 5.833131 ACTGCGGTGGGATCAAAAATTATAT 59.167 36.000 0.00 0.00 0.00 0.86
2737 6878 5.197451 ACTGCGGTGGGATCAAAAATTATA 58.803 37.500 0.00 0.00 0.00 0.98
2738 6879 4.023291 ACTGCGGTGGGATCAAAAATTAT 58.977 39.130 0.00 0.00 0.00 1.28
2739 6880 3.426615 ACTGCGGTGGGATCAAAAATTA 58.573 40.909 0.00 0.00 0.00 1.40
2740 6881 2.231235 GACTGCGGTGGGATCAAAAATT 59.769 45.455 0.80 0.00 0.00 1.82
2741 6882 1.818674 GACTGCGGTGGGATCAAAAAT 59.181 47.619 0.80 0.00 0.00 1.82
2742 6883 1.243902 GACTGCGGTGGGATCAAAAA 58.756 50.000 0.80 0.00 0.00 1.94
2743 6884 0.953471 CGACTGCGGTGGGATCAAAA 60.953 55.000 0.80 0.00 0.00 2.44
2744 6885 1.375396 CGACTGCGGTGGGATCAAA 60.375 57.895 0.80 0.00 0.00 2.69
2745 6886 2.264480 CGACTGCGGTGGGATCAA 59.736 61.111 0.80 0.00 0.00 2.57
2755 6896 4.778415 CCCACGAGACCGACTGCG 62.778 72.222 0.00 0.00 39.50 5.18
2756 6897 1.870055 TAACCCACGAGACCGACTGC 61.870 60.000 0.00 0.00 39.50 4.40
2757 6898 0.599558 TTAACCCACGAGACCGACTG 59.400 55.000 0.00 0.00 39.50 3.51
2758 6899 1.331214 TTTAACCCACGAGACCGACT 58.669 50.000 0.00 0.00 39.50 4.18
2759 6900 2.375173 ATTTAACCCACGAGACCGAC 57.625 50.000 0.00 0.00 39.50 4.79
2760 6901 3.405823 AAATTTAACCCACGAGACCGA 57.594 42.857 0.00 0.00 39.50 4.69
2761 6902 4.034742 CCATAAATTTAACCCACGAGACCG 59.965 45.833 1.21 0.00 42.50 4.79
2762 6903 4.945543 ACCATAAATTTAACCCACGAGACC 59.054 41.667 1.21 0.00 0.00 3.85
2763 6904 5.644636 TGACCATAAATTTAACCCACGAGAC 59.355 40.000 1.21 0.00 0.00 3.36
2764 6905 5.806818 TGACCATAAATTTAACCCACGAGA 58.193 37.500 1.21 0.00 0.00 4.04
2765 6906 6.503589 TTGACCATAAATTTAACCCACGAG 57.496 37.500 1.21 0.00 0.00 4.18
2766 6907 6.490721 ACTTTGACCATAAATTTAACCCACGA 59.509 34.615 1.21 0.00 0.00 4.35
2767 6908 6.683715 ACTTTGACCATAAATTTAACCCACG 58.316 36.000 1.21 0.00 0.00 4.94
2768 6909 8.145122 TCAACTTTGACCATAAATTTAACCCAC 58.855 33.333 1.21 0.00 31.01 4.61
2769 6910 8.251383 TCAACTTTGACCATAAATTTAACCCA 57.749 30.769 1.21 0.00 31.01 4.51
2770 6911 8.984764 GTTCAACTTTGACCATAAATTTAACCC 58.015 33.333 1.21 0.00 36.83 4.11
2771 6912 8.984764 GGTTCAACTTTGACCATAAATTTAACC 58.015 33.333 1.21 0.00 36.83 2.85
2772 6913 9.758651 AGGTTCAACTTTGACCATAAATTTAAC 57.241 29.630 1.21 0.00 36.83 2.01
2773 6914 9.974980 GAGGTTCAACTTTGACCATAAATTTAA 57.025 29.630 1.21 0.00 36.83 1.52
2774 6915 8.293867 CGAGGTTCAACTTTGACCATAAATTTA 58.706 33.333 0.00 0.00 36.83 1.40
2775 6916 7.013846 TCGAGGTTCAACTTTGACCATAAATTT 59.986 33.333 0.00 0.00 36.83 1.82
2776 6917 6.488683 TCGAGGTTCAACTTTGACCATAAATT 59.511 34.615 11.01 0.00 36.83 1.82
2777 6918 6.001460 TCGAGGTTCAACTTTGACCATAAAT 58.999 36.000 11.01 0.00 36.83 1.40
2778 6919 5.369833 TCGAGGTTCAACTTTGACCATAAA 58.630 37.500 11.01 0.00 36.83 1.40
2779 6920 4.963373 TCGAGGTTCAACTTTGACCATAA 58.037 39.130 11.01 0.00 36.83 1.90
2780 6921 4.610605 TCGAGGTTCAACTTTGACCATA 57.389 40.909 11.01 0.00 36.83 2.74
2781 6922 3.485463 TCGAGGTTCAACTTTGACCAT 57.515 42.857 11.01 0.00 36.83 3.55
2782 6923 2.992124 TCGAGGTTCAACTTTGACCA 57.008 45.000 11.01 0.00 36.83 4.02
2783 6924 4.537015 CATTTCGAGGTTCAACTTTGACC 58.463 43.478 0.00 0.00 36.83 4.02
2784 6925 3.975035 GCATTTCGAGGTTCAACTTTGAC 59.025 43.478 0.00 0.00 36.83 3.18
2785 6926 3.303725 CGCATTTCGAGGTTCAACTTTGA 60.304 43.478 0.00 0.00 41.67 2.69
2786 6927 2.973224 CGCATTTCGAGGTTCAACTTTG 59.027 45.455 0.00 0.00 41.67 2.77
2787 6928 2.616842 ACGCATTTCGAGGTTCAACTTT 59.383 40.909 0.00 0.00 41.67 2.66
2788 6929 2.032030 CACGCATTTCGAGGTTCAACTT 60.032 45.455 0.00 0.00 41.67 2.66
2789 6930 1.531149 CACGCATTTCGAGGTTCAACT 59.469 47.619 0.00 0.00 41.67 3.16
2790 6931 1.399727 CCACGCATTTCGAGGTTCAAC 60.400 52.381 0.00 0.00 42.79 3.18
2791 6932 0.871722 CCACGCATTTCGAGGTTCAA 59.128 50.000 0.00 0.00 42.79 2.69
2792 6933 0.953471 CCCACGCATTTCGAGGTTCA 60.953 55.000 0.71 0.00 45.67 3.18
2793 6934 1.794222 CCCACGCATTTCGAGGTTC 59.206 57.895 0.71 0.00 45.67 3.62
2794 6935 2.332654 GCCCACGCATTTCGAGGTT 61.333 57.895 0.71 0.00 45.67 3.50
2795 6936 2.746277 GCCCACGCATTTCGAGGT 60.746 61.111 0.71 0.00 45.67 3.85
2796 6937 3.864686 CGCCCACGCATTTCGAGG 61.865 66.667 0.00 0.00 46.50 4.63
2806 6947 0.384230 CAAAATATAGCGCGCCCACG 60.384 55.000 30.33 4.40 44.07 4.94
2807 6948 0.040425 CCAAAATATAGCGCGCCCAC 60.040 55.000 30.33 0.00 0.00 4.61
2808 6949 0.179043 TCCAAAATATAGCGCGCCCA 60.179 50.000 30.33 17.44 0.00 5.36
2809 6950 0.948678 TTCCAAAATATAGCGCGCCC 59.051 50.000 30.33 0.16 0.00 6.13
2810 6951 1.659211 CGTTCCAAAATATAGCGCGCC 60.659 52.381 30.33 10.31 0.00 6.53
2811 6952 1.658968 CGTTCCAAAATATAGCGCGC 58.341 50.000 26.66 26.66 0.00 6.86
2812 6953 1.862201 TCCGTTCCAAAATATAGCGCG 59.138 47.619 0.00 0.00 0.00 6.86
2813 6954 2.223377 CCTCCGTTCCAAAATATAGCGC 59.777 50.000 0.00 0.00 0.00 5.92
2814 6955 2.806244 CCCTCCGTTCCAAAATATAGCG 59.194 50.000 0.00 0.00 0.00 4.26
2815 6956 4.065789 CTCCCTCCGTTCCAAAATATAGC 58.934 47.826 0.00 0.00 0.00 2.97
2816 6957 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
2817 6958 8.495160 TTATACTCCCTCCGTTCCAAAATATA 57.505 34.615 0.00 0.00 0.00 0.86
2818 6959 5.906772 ATACTCCCTCCGTTCCAAAATAT 57.093 39.130 0.00 0.00 0.00 1.28
2819 6960 6.811634 TTATACTCCCTCCGTTCCAAAATA 57.188 37.500 0.00 0.00 0.00 1.40
2820 6961 5.703730 TTATACTCCCTCCGTTCCAAAAT 57.296 39.130 0.00 0.00 0.00 1.82
2821 6962 5.190132 TGATTATACTCCCTCCGTTCCAAAA 59.810 40.000 0.00 0.00 0.00 2.44
2822 6963 4.717778 TGATTATACTCCCTCCGTTCCAAA 59.282 41.667 0.00 0.00 0.00 3.28
2823 6964 4.100498 GTGATTATACTCCCTCCGTTCCAA 59.900 45.833 0.00 0.00 0.00 3.53
2824 6965 3.640029 GTGATTATACTCCCTCCGTTCCA 59.360 47.826 0.00 0.00 0.00 3.53
2825 6966 3.006644 GGTGATTATACTCCCTCCGTTCC 59.993 52.174 0.00 0.00 0.00 3.62
2826 6967 3.305199 CGGTGATTATACTCCCTCCGTTC 60.305 52.174 0.00 0.00 33.39 3.95
2827 6968 2.626743 CGGTGATTATACTCCCTCCGTT 59.373 50.000 0.00 0.00 33.39 4.44
2828 6969 2.236766 CGGTGATTATACTCCCTCCGT 58.763 52.381 0.00 0.00 33.39 4.69
2829 6970 1.544691 CCGGTGATTATACTCCCTCCG 59.455 57.143 0.00 9.68 37.04 4.63
2830 6971 2.561858 GACCGGTGATTATACTCCCTCC 59.438 54.545 14.63 0.00 0.00 4.30
2831 6972 2.561858 GGACCGGTGATTATACTCCCTC 59.438 54.545 14.63 0.00 0.00 4.30
2832 6973 2.090943 TGGACCGGTGATTATACTCCCT 60.091 50.000 14.63 0.00 0.00 4.20
2833 6974 2.299297 CTGGACCGGTGATTATACTCCC 59.701 54.545 14.63 2.60 0.00 4.30
2834 6975 2.288886 GCTGGACCGGTGATTATACTCC 60.289 54.545 14.63 3.51 0.00 3.85
2835 6976 2.628657 AGCTGGACCGGTGATTATACTC 59.371 50.000 14.63 0.00 0.00 2.59
2836 6977 2.628657 GAGCTGGACCGGTGATTATACT 59.371 50.000 14.63 0.00 0.00 2.12
2837 6978 2.628657 AGAGCTGGACCGGTGATTATAC 59.371 50.000 14.63 0.00 0.00 1.47
2838 6979 2.958818 AGAGCTGGACCGGTGATTATA 58.041 47.619 14.63 0.00 0.00 0.98
2867 7031 0.036952 ACGAGGACAATCAGTGGCTG 60.037 55.000 0.00 0.00 34.56 4.85
2935 7106 1.693083 GCATGTAGGTTCCGACGCAC 61.693 60.000 0.00 0.00 0.00 5.34
2991 7162 0.553819 TAAACAAGGGTGCAGGTGGT 59.446 50.000 0.00 0.00 0.00 4.16
3024 7195 1.007502 GCAAGTTGACAATGGCGCA 60.008 52.632 10.83 0.00 0.00 6.09
3090 7275 0.314302 CTTCGACTCGTTCACCACCT 59.686 55.000 0.00 0.00 0.00 4.00
3138 7323 5.016831 GGATGCTTCCTCCCTTTAGAAAAA 58.983 41.667 11.34 0.00 39.14 1.94
3139 7324 4.600062 GGATGCTTCCTCCCTTTAGAAAA 58.400 43.478 11.34 0.00 39.14 2.29
3140 7325 4.236527 GGATGCTTCCTCCCTTTAGAAA 57.763 45.455 11.34 0.00 39.14 2.52
3141 7326 3.933861 GGATGCTTCCTCCCTTTAGAA 57.066 47.619 11.34 0.00 39.14 2.10
3152 7337 0.179051 CAGAGGCTGAGGATGCTTCC 60.179 60.000 10.66 10.66 42.96 3.46
3153 7338 0.540923 ACAGAGGCTGAGGATGCTTC 59.459 55.000 0.00 0.00 36.89 3.86
3154 7339 1.871418 TACAGAGGCTGAGGATGCTT 58.129 50.000 0.00 0.00 35.18 3.91
3155 7340 1.969923 GATACAGAGGCTGAGGATGCT 59.030 52.381 0.00 0.00 35.18 3.79
3156 7341 1.969923 AGATACAGAGGCTGAGGATGC 59.030 52.381 0.00 0.00 35.18 3.91
3157 7342 2.299582 CCAGATACAGAGGCTGAGGATG 59.700 54.545 0.00 0.00 35.18 3.51
3158 7343 2.178764 TCCAGATACAGAGGCTGAGGAT 59.821 50.000 0.00 0.00 35.18 3.24
3159 7344 1.570979 TCCAGATACAGAGGCTGAGGA 59.429 52.381 0.00 0.00 35.18 3.71
3160 7345 2.079170 TCCAGATACAGAGGCTGAGG 57.921 55.000 0.00 0.00 35.18 3.86
3161 7346 5.722263 CATTATCCAGATACAGAGGCTGAG 58.278 45.833 0.00 0.00 35.18 3.35
3162 7347 4.020751 GCATTATCCAGATACAGAGGCTGA 60.021 45.833 0.00 0.00 35.18 4.26
3163 7348 4.252073 GCATTATCCAGATACAGAGGCTG 58.748 47.826 0.00 0.00 37.52 4.85
3164 7349 3.906218 TGCATTATCCAGATACAGAGGCT 59.094 43.478 0.00 0.00 0.00 4.58
3165 7350 4.277515 TGCATTATCCAGATACAGAGGC 57.722 45.455 0.00 0.00 0.00 4.70
3166 7351 6.038985 CGTATGCATTATCCAGATACAGAGG 58.961 44.000 3.54 0.00 0.00 3.69
3167 7352 6.038985 CCGTATGCATTATCCAGATACAGAG 58.961 44.000 3.54 0.00 0.00 3.35
3168 7353 5.480422 ACCGTATGCATTATCCAGATACAGA 59.520 40.000 3.54 0.00 0.00 3.41
3169 7354 5.724328 ACCGTATGCATTATCCAGATACAG 58.276 41.667 3.54 0.00 0.00 2.74
3170 7355 5.245075 TGACCGTATGCATTATCCAGATACA 59.755 40.000 3.54 0.00 0.00 2.29
3171 7356 5.577164 GTGACCGTATGCATTATCCAGATAC 59.423 44.000 3.54 0.00 0.00 2.24
3172 7357 5.480422 AGTGACCGTATGCATTATCCAGATA 59.520 40.000 3.54 0.00 0.00 1.98
3173 7358 4.284490 AGTGACCGTATGCATTATCCAGAT 59.716 41.667 3.54 0.00 0.00 2.90
3174 7359 3.641436 AGTGACCGTATGCATTATCCAGA 59.359 43.478 3.54 0.00 0.00 3.86
3175 7360 3.995199 AGTGACCGTATGCATTATCCAG 58.005 45.455 3.54 0.00 0.00 3.86
3176 7361 4.415881 AAGTGACCGTATGCATTATCCA 57.584 40.909 3.54 0.00 0.00 3.41
3177 7362 7.435068 AATAAAGTGACCGTATGCATTATCC 57.565 36.000 3.54 0.00 0.00 2.59
3204 7389 9.959749 CTTTGTAAGGTCTTTTGTGCTTAATAA 57.040 29.630 0.00 0.00 0.00 1.40
3205 7390 9.127277 ACTTTGTAAGGTCTTTTGTGCTTAATA 57.873 29.630 0.00 0.00 0.00 0.98
3206 7391 8.007405 ACTTTGTAAGGTCTTTTGTGCTTAAT 57.993 30.769 0.00 0.00 0.00 1.40
3207 7392 7.399245 ACTTTGTAAGGTCTTTTGTGCTTAA 57.601 32.000 0.00 0.00 0.00 1.85
3208 7393 7.771826 ACTACTTTGTAAGGTCTTTTGTGCTTA 59.228 33.333 0.00 0.00 0.00 3.09
3209 7394 5.914898 ACTTTGTAAGGTCTTTTGTGCTT 57.085 34.783 0.00 0.00 0.00 3.91
3210 7395 6.120220 ACTACTTTGTAAGGTCTTTTGTGCT 58.880 36.000 0.00 0.00 0.00 4.40
3211 7396 6.373186 ACTACTTTGTAAGGTCTTTTGTGC 57.627 37.500 0.00 0.00 0.00 4.57
3212 7397 8.428186 TGTACTACTTTGTAAGGTCTTTTGTG 57.572 34.615 0.00 0.00 0.00 3.33
3213 7398 9.269453 GATGTACTACTTTGTAAGGTCTTTTGT 57.731 33.333 0.00 0.00 0.00 2.83
3214 7399 9.268268 TGATGTACTACTTTGTAAGGTCTTTTG 57.732 33.333 0.00 0.00 0.00 2.44
3215 7400 9.490379 CTGATGTACTACTTTGTAAGGTCTTTT 57.510 33.333 0.00 0.00 0.00 2.27
3216 7401 8.648693 ACTGATGTACTACTTTGTAAGGTCTTT 58.351 33.333 0.00 0.00 0.00 2.52
3217 7402 8.191534 ACTGATGTACTACTTTGTAAGGTCTT 57.808 34.615 0.00 0.00 0.00 3.01
3218 7403 7.778185 ACTGATGTACTACTTTGTAAGGTCT 57.222 36.000 0.00 0.00 0.00 3.85
3219 7404 9.570488 CTTACTGATGTACTACTTTGTAAGGTC 57.430 37.037 0.00 0.00 34.82 3.85
3220 7405 8.033626 GCTTACTGATGTACTACTTTGTAAGGT 58.966 37.037 18.10 0.00 37.29 3.50
3221 7406 7.491696 GGCTTACTGATGTACTACTTTGTAAGG 59.508 40.741 18.10 9.39 37.29 2.69
3222 7407 8.251721 AGGCTTACTGATGTACTACTTTGTAAG 58.748 37.037 15.44 15.44 38.81 2.34
3223 7408 8.130671 AGGCTTACTGATGTACTACTTTGTAA 57.869 34.615 0.00 0.00 0.00 2.41
3224 7409 7.713734 AGGCTTACTGATGTACTACTTTGTA 57.286 36.000 0.00 0.00 0.00 2.41
3225 7410 6.607004 AGGCTTACTGATGTACTACTTTGT 57.393 37.500 0.00 0.00 0.00 2.83
3240 7425 0.995024 ATGGTGGCTTCAGGCTTACT 59.005 50.000 1.64 0.00 41.69 2.24
3241 7426 1.065126 AGATGGTGGCTTCAGGCTTAC 60.065 52.381 1.64 0.00 41.69 2.34
3242 7427 1.289160 AGATGGTGGCTTCAGGCTTA 58.711 50.000 1.64 0.00 41.69 3.09
3243 7428 1.211457 CTAGATGGTGGCTTCAGGCTT 59.789 52.381 1.64 0.00 41.69 4.35
3244 7429 0.835941 CTAGATGGTGGCTTCAGGCT 59.164 55.000 1.64 0.00 41.69 4.58
3245 7430 0.179034 CCTAGATGGTGGCTTCAGGC 60.179 60.000 0.00 0.00 41.50 4.85
3246 7431 0.179034 GCCTAGATGGTGGCTTCAGG 60.179 60.000 0.00 0.00 45.26 3.86
3247 7432 3.393472 GCCTAGATGGTGGCTTCAG 57.607 57.895 0.00 0.00 45.26 3.02
3253 7438 4.381398 CGAGAGATATTGCCTAGATGGTGG 60.381 50.000 0.00 0.00 38.35 4.61
3254 7439 4.742417 CGAGAGATATTGCCTAGATGGTG 58.258 47.826 0.00 0.00 38.35 4.17
3255 7440 3.194542 GCGAGAGATATTGCCTAGATGGT 59.805 47.826 0.00 0.00 38.35 3.55
3256 7441 3.446873 AGCGAGAGATATTGCCTAGATGG 59.553 47.826 0.00 0.00 39.35 3.51
3257 7442 4.717233 AGCGAGAGATATTGCCTAGATG 57.283 45.455 0.00 0.00 0.00 2.90
3267 7452 4.538738 GGGGTAGGAATAGCGAGAGATAT 58.461 47.826 0.00 0.00 46.04 1.63
3268 7453 3.308976 GGGGGTAGGAATAGCGAGAGATA 60.309 52.174 0.00 0.00 35.88 1.98
3269 7454 2.557901 GGGGGTAGGAATAGCGAGAGAT 60.558 54.545 0.00 0.00 0.00 2.75
3270 7455 1.203025 GGGGGTAGGAATAGCGAGAGA 60.203 57.143 0.00 0.00 0.00 3.10
3271 7456 1.203075 AGGGGGTAGGAATAGCGAGAG 60.203 57.143 0.00 0.00 0.00 3.20
3272 7457 0.858369 AGGGGGTAGGAATAGCGAGA 59.142 55.000 0.00 0.00 0.00 4.04
3273 7458 1.344763 CAAGGGGGTAGGAATAGCGAG 59.655 57.143 0.00 0.00 0.00 5.03
3274 7459 1.062734 TCAAGGGGGTAGGAATAGCGA 60.063 52.381 0.00 0.00 0.00 4.93
3275 7460 1.420430 TCAAGGGGGTAGGAATAGCG 58.580 55.000 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.