Multiple sequence alignment - TraesCS1B01G308500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G308500 chr1B 100.000 2858 0 0 1 2858 531165036 531167893 0.000000e+00 5278.0
1 TraesCS1B01G308500 chr1B 97.865 281 6 0 2390 2670 660082336 660082056 1.190000e-133 486.0
2 TraesCS1B01G308500 chr1B 97.509 281 7 0 2393 2673 167110254 167110534 5.540000e-132 481.0
3 TraesCS1B01G308500 chr1D 91.797 1536 65 26 609 2114 391340715 391339211 0.000000e+00 2082.0
4 TraesCS1B01G308500 chr1D 80.137 146 13 9 2664 2793 391338981 391338836 8.430000e-16 95.3
5 TraesCS1B01G308500 chr1A 90.103 1546 80 27 609 2114 493736414 493737926 0.000000e+00 1940.0
6 TraesCS1B01G308500 chr4B 97.811 594 12 1 1 594 28703062 28703654 0.000000e+00 1024.0
7 TraesCS1B01G308500 chr4B 82.718 596 99 4 1 594 638702287 638702880 7.010000e-146 527.0
8 TraesCS1B01G308500 chr4B 98.208 279 4 1 2390 2667 424602766 424602488 1.190000e-133 486.0
9 TraesCS1B01G308500 chr2D 88.571 595 67 1 1 594 357282806 357282212 0.000000e+00 721.0
10 TraesCS1B01G308500 chr2D 95.349 43 0 2 2194 2236 639902145 639902185 1.840000e-07 67.6
11 TraesCS1B01G308500 chr7D 88.384 594 69 0 1 594 577210370 577209777 0.000000e+00 715.0
12 TraesCS1B01G308500 chr5D 87.395 595 73 2 1 594 356975812 356975219 0.000000e+00 682.0
13 TraesCS1B01G308500 chr5D 92.308 39 3 0 2200 2238 28479950 28479988 3.980000e-04 56.5
14 TraesCS1B01G308500 chr4D 87.059 595 75 2 1 594 17852212 17852805 0.000000e+00 671.0
15 TraesCS1B01G308500 chr4D 82.393 585 98 4 12 594 75235974 75235393 3.290000e-139 505.0
16 TraesCS1B01G308500 chr3A 85.378 595 84 3 1 594 706551382 706550790 5.230000e-172 614.0
17 TraesCS1B01G308500 chr3A 98.214 280 5 0 2391 2670 481022569 481022848 9.200000e-135 490.0
18 TraesCS1B01G308500 chr3A 97.059 34 1 0 2200 2233 700234762 700234795 1.110000e-04 58.4
19 TraesCS1B01G308500 chr5A 83.932 585 90 4 12 594 607295589 607295007 8.940000e-155 556.0
20 TraesCS1B01G308500 chr7A 98.214 280 5 0 2390 2669 610710717 610710438 9.200000e-135 490.0
21 TraesCS1B01G308500 chr7A 97.509 281 7 0 2390 2670 620197319 620197039 5.540000e-132 481.0
22 TraesCS1B01G308500 chr6A 97.872 282 6 0 2391 2672 38758093 38757812 3.310000e-134 488.0
23 TraesCS1B01G308500 chr6A 97.619 42 1 0 2197 2238 58311773 58311732 3.950000e-09 73.1
24 TraesCS1B01G308500 chr2B 97.518 282 7 0 2388 2669 11723880 11723599 1.540000e-132 483.0
25 TraesCS1B01G308500 chr6B 97.518 282 6 1 2388 2669 347118525 347118245 5.540000e-132 481.0
26 TraesCS1B01G308500 chr3D 97.500 40 1 0 2199 2238 250918800 250918761 5.110000e-08 69.4
27 TraesCS1B01G308500 chr3B 93.478 46 2 1 2195 2240 25137390 25137346 1.840000e-07 67.6
28 TraesCS1B01G308500 chrUn 93.023 43 3 0 2196 2238 96589248 96589206 2.380000e-06 63.9
29 TraesCS1B01G308500 chr6D 100.000 33 0 0 2208 2240 3489537 3489569 8.550000e-06 62.1
30 TraesCS1B01G308500 chr5B 94.872 39 2 0 2200 2238 20822329 20822291 8.550000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G308500 chr1B 531165036 531167893 2857 False 5278.00 5278 100.000 1 2858 1 chr1B.!!$F2 2857
1 TraesCS1B01G308500 chr1D 391338836 391340715 1879 True 1088.65 2082 85.967 609 2793 2 chr1D.!!$R1 2184
2 TraesCS1B01G308500 chr1A 493736414 493737926 1512 False 1940.00 1940 90.103 609 2114 1 chr1A.!!$F1 1505
3 TraesCS1B01G308500 chr4B 28703062 28703654 592 False 1024.00 1024 97.811 1 594 1 chr4B.!!$F1 593
4 TraesCS1B01G308500 chr4B 638702287 638702880 593 False 527.00 527 82.718 1 594 1 chr4B.!!$F2 593
5 TraesCS1B01G308500 chr2D 357282212 357282806 594 True 721.00 721 88.571 1 594 1 chr2D.!!$R1 593
6 TraesCS1B01G308500 chr7D 577209777 577210370 593 True 715.00 715 88.384 1 594 1 chr7D.!!$R1 593
7 TraesCS1B01G308500 chr5D 356975219 356975812 593 True 682.00 682 87.395 1 594 1 chr5D.!!$R1 593
8 TraesCS1B01G308500 chr4D 17852212 17852805 593 False 671.00 671 87.059 1 594 1 chr4D.!!$F1 593
9 TraesCS1B01G308500 chr4D 75235393 75235974 581 True 505.00 505 82.393 12 594 1 chr4D.!!$R1 582
10 TraesCS1B01G308500 chr3A 706550790 706551382 592 True 614.00 614 85.378 1 594 1 chr3A.!!$R1 593
11 TraesCS1B01G308500 chr5A 607295007 607295589 582 True 556.00 556 83.932 12 594 1 chr5A.!!$R1 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
985 1008 0.109964 AGCGAGCGAGCGATAGAATC 60.11 55.0 1.41 0.0 43.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2507 2569 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.0 0.0 0.0 0.0 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
299 301 6.805016 ATCTGAACATCTTAGGACTCACAT 57.195 37.500 0.00 0.00 0.00 3.21
327 329 4.579340 TCGCCCTCTAGTATCTAACAACAG 59.421 45.833 0.00 0.00 0.00 3.16
375 377 0.977395 AGGGCAGTTAGTGAGGTCAC 59.023 55.000 1.60 1.60 46.77 3.67
594 596 7.607615 TCCTAACTAAGTTAAAGTCACCACT 57.392 36.000 0.00 0.00 0.00 4.00
595 597 8.710749 TCCTAACTAAGTTAAAGTCACCACTA 57.289 34.615 0.00 0.00 30.14 2.74
596 598 8.579863 TCCTAACTAAGTTAAAGTCACCACTAC 58.420 37.037 0.00 0.00 30.14 2.73
597 599 8.583296 CCTAACTAAGTTAAAGTCACCACTACT 58.417 37.037 0.00 0.00 30.14 2.57
598 600 9.978044 CTAACTAAGTTAAAGTCACCACTACTT 57.022 33.333 0.00 0.00 38.82 2.24
600 602 9.676861 AACTAAGTTAAAGTCACCACTACTTTT 57.323 29.630 6.53 0.00 42.97 2.27
601 603 9.322773 ACTAAGTTAAAGTCACCACTACTTTTC 57.677 33.333 6.53 2.32 42.97 2.29
602 604 7.563888 AAGTTAAAGTCACCACTACTTTTCC 57.436 36.000 6.53 0.00 42.97 3.13
603 605 6.060136 AGTTAAAGTCACCACTACTTTTCCC 58.940 40.000 6.53 0.00 42.97 3.97
604 606 4.513406 AAAGTCACCACTACTTTTCCCA 57.487 40.909 0.00 0.00 42.97 4.37
605 607 4.724279 AAGTCACCACTACTTTTCCCAT 57.276 40.909 0.00 0.00 33.39 4.00
606 608 4.021102 AGTCACCACTACTTTTCCCATG 57.979 45.455 0.00 0.00 0.00 3.66
607 609 3.650942 AGTCACCACTACTTTTCCCATGA 59.349 43.478 0.00 0.00 0.00 3.07
619 621 7.544804 ACTTTTCCCATGAAAATTAGAAGCT 57.455 32.000 0.00 0.00 46.44 3.74
632 634 9.794685 GAAAATTAGAAGCTCTTAATTTCCTGG 57.205 33.333 19.94 0.00 32.81 4.45
633 635 7.888250 AATTAGAAGCTCTTAATTTCCTGGG 57.112 36.000 8.74 0.00 0.00 4.45
725 730 3.340814 TGAAGAGATTTGGAGCCAGTC 57.659 47.619 0.00 0.00 0.00 3.51
736 741 1.743996 GAGCCAGTCTCCACCAAATC 58.256 55.000 0.00 0.00 35.77 2.17
741 746 2.430465 CAGTCTCCACCAAATCACCTG 58.570 52.381 0.00 0.00 0.00 4.00
798 803 0.535102 AACCAGCAAGAGAACGTGGG 60.535 55.000 0.00 0.00 32.13 4.61
809 814 3.515316 AACGTGGGCGACTGGTCAG 62.515 63.158 0.00 0.00 42.00 3.51
815 820 2.740055 GCGACTGGTCAGCCACAG 60.740 66.667 0.00 0.00 40.46 3.66
853 858 8.893219 AGAGGAAAAGCCAAAAGAAAAATAAG 57.107 30.769 0.00 0.00 40.02 1.73
902 911 2.288395 CCTTGCAATTCTGTGGTGTTCC 60.288 50.000 0.00 0.00 0.00 3.62
903 912 2.363306 TGCAATTCTGTGGTGTTCCT 57.637 45.000 0.00 0.00 34.23 3.36
958 979 2.611518 GTGTGTGTAAGGCTAGAGCAG 58.388 52.381 3.54 0.00 44.36 4.24
985 1008 0.109964 AGCGAGCGAGCGATAGAATC 60.110 55.000 1.41 0.00 43.00 2.52
1146 1175 1.002430 TGCAATGCTTCTTCGTCTCCT 59.998 47.619 6.82 0.00 0.00 3.69
1212 1241 4.026356 GGTACGGGACCTATCTAGCTAA 57.974 50.000 0.88 0.00 45.89 3.09
1225 1254 7.040961 ACCTATCTAGCTAATCGTGTCTTCTTC 60.041 40.741 0.00 0.00 0.00 2.87
1237 1266 5.870433 TCGTGTCTTCTTCTTGTTGTTGTTA 59.130 36.000 0.00 0.00 0.00 2.41
1247 1276 1.065401 TGTTGTTGTTACTGCTGCTGC 59.935 47.619 8.89 8.89 40.20 5.25
1268 1300 4.349048 TGCTATCTGAACTTGGATATGCCT 59.651 41.667 0.00 0.00 37.63 4.75
1433 1475 3.335579 ACGCACTCCTACCAATTCTTTC 58.664 45.455 0.00 0.00 0.00 2.62
1463 1505 1.434188 TCTTCTGGCCTTGTCTTCCA 58.566 50.000 3.32 0.00 0.00 3.53
1481 1523 2.102084 TCCATCTTCTCGGCATCTCAAG 59.898 50.000 0.00 0.00 0.00 3.02
1575 1617 2.360852 ACGTCGTCCGATGGGTCT 60.361 61.111 12.97 0.00 40.70 3.85
1618 1660 3.001514 GGCTGGCCCTCATCTTCA 58.998 61.111 0.00 0.00 0.00 3.02
1863 1911 2.502080 CCGTCGTCGTGAGCTGAC 60.502 66.667 0.00 0.00 35.01 3.51
1869 1922 2.608546 GTCGTCGTGAGCTGACTATACT 59.391 50.000 0.79 0.00 34.17 2.12
1895 1948 3.119280 TGAGCGTGAGACGGAAATAATCA 60.119 43.478 0.00 0.00 42.82 2.57
1959 2012 5.577554 TGTTAGCAATTCGATACAACGCTAA 59.422 36.000 0.00 0.00 37.95 3.09
1978 2031 5.904080 CGCTAAAGTTTGAAGAGTTTGACAG 59.096 40.000 0.00 0.00 0.00 3.51
1996 2049 0.687354 AGGCCGTTCTTCACTCATGT 59.313 50.000 0.00 0.00 0.00 3.21
1999 2052 1.873591 GCCGTTCTTCACTCATGTGTT 59.126 47.619 0.00 0.00 44.14 3.32
2000 2053 2.290641 GCCGTTCTTCACTCATGTGTTT 59.709 45.455 0.00 0.00 44.14 2.83
2052 2105 3.302344 CCGGGTGGTTGGCTTTGG 61.302 66.667 0.00 0.00 0.00 3.28
2053 2106 2.520741 CGGGTGGTTGGCTTTGGT 60.521 61.111 0.00 0.00 0.00 3.67
2054 2107 2.855514 CGGGTGGTTGGCTTTGGTG 61.856 63.158 0.00 0.00 0.00 4.17
2056 2109 1.441311 GGTGGTTGGCTTTGGTGTG 59.559 57.895 0.00 0.00 0.00 3.82
2057 2110 1.227234 GTGGTTGGCTTTGGTGTGC 60.227 57.895 0.00 0.00 0.00 4.57
2058 2111 2.027460 GGTTGGCTTTGGTGTGCG 59.973 61.111 0.00 0.00 0.00 5.34
2059 2112 2.781158 GGTTGGCTTTGGTGTGCGT 61.781 57.895 0.00 0.00 0.00 5.24
2060 2113 1.448922 GGTTGGCTTTGGTGTGCGTA 61.449 55.000 0.00 0.00 0.00 4.42
2061 2114 0.382515 GTTGGCTTTGGTGTGCGTAA 59.617 50.000 0.00 0.00 0.00 3.18
2062 2115 1.000717 GTTGGCTTTGGTGTGCGTAAT 60.001 47.619 0.00 0.00 0.00 1.89
2063 2116 1.323412 TGGCTTTGGTGTGCGTAATT 58.677 45.000 0.00 0.00 0.00 1.40
2064 2117 1.000827 TGGCTTTGGTGTGCGTAATTG 60.001 47.619 0.00 0.00 0.00 2.32
2065 2118 1.059942 GCTTTGGTGTGCGTAATTGC 58.940 50.000 0.00 0.00 0.00 3.56
2106 2159 4.870363 ACCAGTTGCAATCATGTTACAAC 58.130 39.130 0.59 12.47 40.65 3.32
2107 2160 4.340666 ACCAGTTGCAATCATGTTACAACA 59.659 37.500 18.23 0.00 42.32 3.33
2109 2162 5.574055 CCAGTTGCAATCATGTTACAACATC 59.426 40.000 18.23 0.00 46.10 3.06
2110 2163 6.384224 CAGTTGCAATCATGTTACAACATCT 58.616 36.000 18.23 0.00 46.10 2.90
2111 2164 6.525628 CAGTTGCAATCATGTTACAACATCTC 59.474 38.462 18.23 0.00 46.10 2.75
2112 2165 5.565592 TGCAATCATGTTACAACATCTCC 57.434 39.130 4.61 0.00 46.10 3.71
2113 2166 5.008980 TGCAATCATGTTACAACATCTCCA 58.991 37.500 4.61 0.00 46.10 3.86
2114 2167 5.124297 TGCAATCATGTTACAACATCTCCAG 59.876 40.000 4.61 0.00 46.10 3.86
2115 2168 5.355071 GCAATCATGTTACAACATCTCCAGA 59.645 40.000 4.61 0.43 46.10 3.86
2116 2169 6.039047 GCAATCATGTTACAACATCTCCAGAT 59.961 38.462 4.61 2.61 46.10 2.90
2160 2213 8.041919 TGTTACAACATCTCCACGGAAATATAA 58.958 33.333 0.00 0.00 33.17 0.98
2167 2220 6.097915 TCTCCACGGAAATATAATCCAGTC 57.902 41.667 7.92 0.00 36.74 3.51
2205 2258 6.331061 CAACGATTGCCTATATAGTACTCCC 58.669 44.000 0.00 0.00 0.00 4.30
2206 2259 5.828871 ACGATTGCCTATATAGTACTCCCT 58.171 41.667 0.00 0.00 0.00 4.20
2207 2260 5.887035 ACGATTGCCTATATAGTACTCCCTC 59.113 44.000 0.00 0.00 0.00 4.30
2208 2261 5.299782 CGATTGCCTATATAGTACTCCCTCC 59.700 48.000 0.00 0.00 0.00 4.30
2209 2262 5.610429 TTGCCTATATAGTACTCCCTCCA 57.390 43.478 0.00 0.00 0.00 3.86
2210 2263 5.815723 TGCCTATATAGTACTCCCTCCAT 57.184 43.478 0.00 0.00 0.00 3.41
2211 2264 6.920695 TGCCTATATAGTACTCCCTCCATA 57.079 41.667 0.00 0.00 0.00 2.74
2212 2265 6.670617 TGCCTATATAGTACTCCCTCCATAC 58.329 44.000 0.00 0.00 0.00 2.39
2213 2266 6.069994 GCCTATATAGTACTCCCTCCATACC 58.930 48.000 0.00 0.00 0.00 2.73
2214 2267 6.354564 GCCTATATAGTACTCCCTCCATACCA 60.355 46.154 0.00 0.00 0.00 3.25
2215 2268 7.649715 CCTATATAGTACTCCCTCCATACCAA 58.350 42.308 0.00 0.00 0.00 3.67
2216 2269 8.120538 CCTATATAGTACTCCCTCCATACCAAA 58.879 40.741 0.00 0.00 0.00 3.28
2217 2270 9.543231 CTATATAGTACTCCCTCCATACCAAAA 57.457 37.037 0.00 0.00 0.00 2.44
2218 2271 8.990693 ATATAGTACTCCCTCCATACCAAAAT 57.009 34.615 0.00 0.00 0.00 1.82
2220 2273 8.990693 ATAGTACTCCCTCCATACCAAAATAT 57.009 34.615 0.00 0.00 0.00 1.28
2222 2275 8.808240 AGTACTCCCTCCATACCAAAATATAA 57.192 34.615 0.00 0.00 0.00 0.98
2223 2276 8.881262 AGTACTCCCTCCATACCAAAATATAAG 58.119 37.037 0.00 0.00 0.00 1.73
2224 2277 7.947782 ACTCCCTCCATACCAAAATATAAGA 57.052 36.000 0.00 0.00 0.00 2.10
2225 2278 8.525729 ACTCCCTCCATACCAAAATATAAGAT 57.474 34.615 0.00 0.00 0.00 2.40
2226 2279 8.386264 ACTCCCTCCATACCAAAATATAAGATG 58.614 37.037 0.00 0.00 0.00 2.90
2227 2280 8.287904 TCCCTCCATACCAAAATATAAGATGT 57.712 34.615 0.00 0.00 0.00 3.06
2228 2281 8.732854 TCCCTCCATACCAAAATATAAGATGTT 58.267 33.333 0.00 0.00 0.00 2.71
2229 2282 9.367160 CCCTCCATACCAAAATATAAGATGTTT 57.633 33.333 0.00 0.00 0.00 2.83
2237 2290 9.777297 ACCAAAATATAAGATGTTTTTGCAGTT 57.223 25.926 0.00 0.00 37.60 3.16
2244 2297 8.801715 ATAAGATGTTTTTGCAGTTTACACAG 57.198 30.769 0.00 0.00 0.00 3.66
2245 2298 5.591099 AGATGTTTTTGCAGTTTACACAGG 58.409 37.500 0.00 0.00 0.00 4.00
2246 2299 4.792521 TGTTTTTGCAGTTTACACAGGT 57.207 36.364 0.00 0.00 0.00 4.00
2247 2300 5.899120 TGTTTTTGCAGTTTACACAGGTA 57.101 34.783 0.00 0.00 0.00 3.08
2248 2301 5.885881 TGTTTTTGCAGTTTACACAGGTAG 58.114 37.500 0.00 0.00 0.00 3.18
2319 2381 4.272504 TGGTGATTCGTTTTCAGTCTGAAC 59.727 41.667 14.98 4.75 35.89 3.18
2323 2385 0.934496 CGTTTTCAGTCTGAACGCCA 59.066 50.000 14.98 0.00 39.49 5.69
2331 2393 2.414481 CAGTCTGAACGCCAATGAGAAG 59.586 50.000 0.00 0.00 0.00 2.85
2338 2400 2.783135 ACGCCAATGAGAAGATGTTGT 58.217 42.857 0.00 0.00 0.00 3.32
2356 2418 2.106566 TGTGGGCTCAAGCAAAAGAAA 58.893 42.857 4.13 0.00 44.36 2.52
2373 2435 8.430828 GCAAAAGAAAATCTTGCTTAATCAGAC 58.569 33.333 0.00 0.00 41.74 3.51
2385 2447 4.677584 CTTAATCAGACGAAGGACTCCAG 58.322 47.826 0.00 0.00 0.00 3.86
2394 2456 3.648694 GGACTCCAGGGCCTTAGG 58.351 66.667 1.32 2.62 40.87 2.69
2405 2467 3.577389 GCCTTAGGCTGGTCACAAT 57.423 52.632 17.16 0.00 46.69 2.71
2406 2468 1.098050 GCCTTAGGCTGGTCACAATG 58.902 55.000 17.16 0.00 46.69 2.82
2410 2472 0.548926 TAGGCTGGTCACAATGGGGA 60.549 55.000 0.00 0.00 0.00 4.81
2411 2473 1.379044 GGCTGGTCACAATGGGGAG 60.379 63.158 0.00 0.00 0.00 4.30
2412 2474 1.379044 GCTGGTCACAATGGGGAGG 60.379 63.158 0.00 0.00 0.00 4.30
2413 2475 1.852157 GCTGGTCACAATGGGGAGGA 61.852 60.000 0.00 0.00 0.00 3.71
2414 2476 0.698238 CTGGTCACAATGGGGAGGAA 59.302 55.000 0.00 0.00 0.00 3.36
2417 2479 1.075536 GGTCACAATGGGGAGGAACTT 59.924 52.381 0.00 0.00 41.55 2.66
2418 2480 2.307686 GGTCACAATGGGGAGGAACTTA 59.692 50.000 0.00 0.00 41.55 2.24
2419 2481 3.245122 GGTCACAATGGGGAGGAACTTAA 60.245 47.826 0.00 0.00 41.55 1.85
2420 2482 4.010349 GTCACAATGGGGAGGAACTTAAG 58.990 47.826 0.00 0.00 41.55 1.85
2421 2483 3.913799 TCACAATGGGGAGGAACTTAAGA 59.086 43.478 10.09 0.00 41.55 2.10
2422 2484 4.019321 TCACAATGGGGAGGAACTTAAGAG 60.019 45.833 10.09 0.00 41.55 2.85
2423 2485 3.916989 ACAATGGGGAGGAACTTAAGAGT 59.083 43.478 10.09 0.00 41.55 3.24
2424 2486 5.045869 CACAATGGGGAGGAACTTAAGAGTA 60.046 44.000 10.09 0.00 41.55 2.59
2425 2487 5.550403 ACAATGGGGAGGAACTTAAGAGTAA 59.450 40.000 10.09 0.00 41.55 2.24
2426 2488 5.695424 ATGGGGAGGAACTTAAGAGTAAC 57.305 43.478 10.09 0.00 41.55 2.50
2427 2489 4.495565 TGGGGAGGAACTTAAGAGTAACA 58.504 43.478 10.09 0.00 41.55 2.41
2428 2490 5.098663 TGGGGAGGAACTTAAGAGTAACAT 58.901 41.667 10.09 0.00 41.55 2.71
2429 2491 5.189145 TGGGGAGGAACTTAAGAGTAACATC 59.811 44.000 10.09 2.98 41.55 3.06
2430 2492 5.189145 GGGGAGGAACTTAAGAGTAACATCA 59.811 44.000 10.09 0.00 41.55 3.07
2431 2493 6.107343 GGGAGGAACTTAAGAGTAACATCAC 58.893 44.000 10.09 0.62 41.55 3.06
2432 2494 6.295688 GGGAGGAACTTAAGAGTAACATCACA 60.296 42.308 10.09 0.00 41.55 3.58
2433 2495 6.590677 GGAGGAACTTAAGAGTAACATCACAC 59.409 42.308 10.09 0.00 41.55 3.82
2434 2496 7.062749 AGGAACTTAAGAGTAACATCACACA 57.937 36.000 10.09 0.00 34.21 3.72
2435 2497 6.929606 AGGAACTTAAGAGTAACATCACACAC 59.070 38.462 10.09 0.00 34.21 3.82
2436 2498 6.929606 GGAACTTAAGAGTAACATCACACACT 59.070 38.462 10.09 0.00 34.21 3.55
2437 2499 7.116519 GGAACTTAAGAGTAACATCACACACTC 59.883 40.741 10.09 0.00 38.13 3.51
2438 2500 6.456501 ACTTAAGAGTAACATCACACACTCC 58.543 40.000 10.09 0.00 38.53 3.85
2439 2501 4.955811 AAGAGTAACATCACACACTCCA 57.044 40.909 0.00 0.00 38.53 3.86
2440 2502 4.955811 AGAGTAACATCACACACTCCAA 57.044 40.909 0.00 0.00 38.53 3.53
2441 2503 5.489792 AGAGTAACATCACACACTCCAAT 57.510 39.130 0.00 0.00 38.53 3.16
2442 2504 6.605471 AGAGTAACATCACACACTCCAATA 57.395 37.500 0.00 0.00 38.53 1.90
2443 2505 6.398918 AGAGTAACATCACACACTCCAATAC 58.601 40.000 0.00 0.00 38.53 1.89
2444 2506 6.014584 AGAGTAACATCACACACTCCAATACA 60.015 38.462 0.00 0.00 38.53 2.29
2445 2507 6.530120 AGTAACATCACACACTCCAATACAA 58.470 36.000 0.00 0.00 0.00 2.41
2446 2508 5.689383 AACATCACACACTCCAATACAAC 57.311 39.130 0.00 0.00 0.00 3.32
2447 2509 4.973168 ACATCACACACTCCAATACAACT 58.027 39.130 0.00 0.00 0.00 3.16
2448 2510 5.376625 ACATCACACACTCCAATACAACTT 58.623 37.500 0.00 0.00 0.00 2.66
2449 2511 5.827797 ACATCACACACTCCAATACAACTTT 59.172 36.000 0.00 0.00 0.00 2.66
2450 2512 5.749596 TCACACACTCCAATACAACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
2451 2513 4.036262 TCACACACTCCAATACAACTTTGC 59.964 41.667 0.00 0.00 0.00 3.68
2452 2514 4.036734 CACACACTCCAATACAACTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
2453 2515 4.644685 ACACACTCCAATACAACTTTGCTT 59.355 37.500 0.00 0.00 0.00 3.91
2454 2516 5.825679 ACACACTCCAATACAACTTTGCTTA 59.174 36.000 0.00 0.00 0.00 3.09
2455 2517 6.490040 ACACACTCCAATACAACTTTGCTTAT 59.510 34.615 0.00 0.00 0.00 1.73
2456 2518 6.803320 CACACTCCAATACAACTTTGCTTATG 59.197 38.462 0.00 0.00 0.00 1.90
2457 2519 6.490040 ACACTCCAATACAACTTTGCTTATGT 59.510 34.615 0.00 0.00 0.00 2.29
2458 2520 6.803320 CACTCCAATACAACTTTGCTTATGTG 59.197 38.462 0.00 0.00 0.00 3.21
2459 2521 6.071952 ACTCCAATACAACTTTGCTTATGTGG 60.072 38.462 0.00 0.00 0.00 4.17
2460 2522 4.864247 CCAATACAACTTTGCTTATGTGGC 59.136 41.667 0.00 0.00 0.00 5.01
2461 2523 5.468592 CAATACAACTTTGCTTATGTGGCA 58.531 37.500 0.00 0.00 37.97 4.92
2462 2524 3.369546 ACAACTTTGCTTATGTGGCAC 57.630 42.857 11.55 11.55 39.55 5.01
2463 2525 2.692557 ACAACTTTGCTTATGTGGCACA 59.307 40.909 24.36 24.36 39.55 4.57
2464 2526 3.321682 ACAACTTTGCTTATGTGGCACAT 59.678 39.130 33.18 33.18 44.52 3.21
2465 2527 4.522405 ACAACTTTGCTTATGTGGCACATA 59.478 37.500 31.06 31.06 44.52 2.29
2466 2528 5.185635 ACAACTTTGCTTATGTGGCACATAT 59.814 36.000 33.89 18.57 44.52 1.78
2467 2529 5.920193 ACTTTGCTTATGTGGCACATATT 57.080 34.783 33.89 17.87 44.52 1.28
2468 2530 6.284891 ACTTTGCTTATGTGGCACATATTT 57.715 33.333 33.89 17.52 44.52 1.40
2469 2531 7.403312 ACTTTGCTTATGTGGCACATATTTA 57.597 32.000 33.89 21.55 44.52 1.40
2470 2532 7.835822 ACTTTGCTTATGTGGCACATATTTAA 58.164 30.769 33.89 25.24 44.52 1.52
2471 2533 8.477256 ACTTTGCTTATGTGGCACATATTTAAT 58.523 29.630 33.89 15.77 44.52 1.40
2472 2534 8.645730 TTTGCTTATGTGGCACATATTTAATG 57.354 30.769 33.89 20.34 44.52 1.90
2473 2535 7.579761 TGCTTATGTGGCACATATTTAATGA 57.420 32.000 33.89 19.68 44.52 2.57
2474 2536 8.005192 TGCTTATGTGGCACATATTTAATGAA 57.995 30.769 33.89 20.49 44.52 2.57
2475 2537 8.136800 TGCTTATGTGGCACATATTTAATGAAG 58.863 33.333 33.89 27.40 44.52 3.02
2476 2538 8.352201 GCTTATGTGGCACATATTTAATGAAGA 58.648 33.333 33.89 17.83 44.52 2.87
2477 2539 9.888878 CTTATGTGGCACATATTTAATGAAGAG 57.111 33.333 33.89 22.09 44.52 2.85
2478 2540 9.625747 TTATGTGGCACATATTTAATGAAGAGA 57.374 29.630 33.89 16.11 44.52 3.10
2479 2541 7.558161 TGTGGCACATATTTAATGAAGAGAG 57.442 36.000 17.96 0.00 44.52 3.20
2480 2542 7.337938 TGTGGCACATATTTAATGAAGAGAGA 58.662 34.615 17.96 0.00 44.52 3.10
2481 2543 7.496920 TGTGGCACATATTTAATGAAGAGAGAG 59.503 37.037 17.96 0.00 44.52 3.20
2482 2544 6.994496 TGGCACATATTTAATGAAGAGAGAGG 59.006 38.462 0.00 0.00 0.00 3.69
2483 2545 6.995091 GGCACATATTTAATGAAGAGAGAGGT 59.005 38.462 0.00 0.00 0.00 3.85
2484 2546 7.041508 GGCACATATTTAATGAAGAGAGAGGTG 60.042 40.741 0.00 0.00 0.00 4.00
2485 2547 7.519649 GCACATATTTAATGAAGAGAGAGGTGC 60.520 40.741 0.00 0.00 37.76 5.01
2486 2548 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
2487 2549 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
2488 2550 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
2489 2551 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
2490 2552 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
2491 2553 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
2492 2554 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
2493 2555 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
2494 2556 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
2495 2557 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
2496 2558 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
2497 2559 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
2498 2560 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
2515 2577 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
2516 2578 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
2517 2579 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
2518 2580 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
2519 2581 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
2520 2582 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
2521 2583 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
2522 2584 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
2523 2585 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
2524 2586 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
2525 2587 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
2526 2588 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
2527 2589 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
2528 2590 1.800586 CGGAACATCACACACTCCAAG 59.199 52.381 0.00 0.00 0.00 3.61
2529 2591 2.547855 CGGAACATCACACACTCCAAGA 60.548 50.000 0.00 0.00 0.00 3.02
2530 2592 3.476552 GGAACATCACACACTCCAAGAA 58.523 45.455 0.00 0.00 0.00 2.52
2531 2593 3.882888 GGAACATCACACACTCCAAGAAA 59.117 43.478 0.00 0.00 0.00 2.52
2532 2594 4.261197 GGAACATCACACACTCCAAGAAAC 60.261 45.833 0.00 0.00 0.00 2.78
2533 2595 3.884895 ACATCACACACTCCAAGAAACA 58.115 40.909 0.00 0.00 0.00 2.83
2534 2596 4.269183 ACATCACACACTCCAAGAAACAA 58.731 39.130 0.00 0.00 0.00 2.83
2535 2597 4.889409 ACATCACACACTCCAAGAAACAAT 59.111 37.500 0.00 0.00 0.00 2.71
2536 2598 4.898829 TCACACACTCCAAGAAACAATG 57.101 40.909 0.00 0.00 0.00 2.82
2537 2599 4.522114 TCACACACTCCAAGAAACAATGA 58.478 39.130 0.00 0.00 0.00 2.57
2538 2600 4.576053 TCACACACTCCAAGAAACAATGAG 59.424 41.667 0.00 0.00 0.00 2.90
2539 2601 4.336433 CACACACTCCAAGAAACAATGAGT 59.664 41.667 0.00 0.00 36.77 3.41
2540 2602 4.576463 ACACACTCCAAGAAACAATGAGTC 59.424 41.667 0.00 0.00 34.21 3.36
2541 2603 4.818546 CACACTCCAAGAAACAATGAGTCT 59.181 41.667 0.00 0.00 34.21 3.24
2542 2604 5.991606 CACACTCCAAGAAACAATGAGTCTA 59.008 40.000 0.00 0.00 34.21 2.59
2543 2605 6.652481 CACACTCCAAGAAACAATGAGTCTAT 59.348 38.462 0.00 0.00 34.21 1.98
2544 2606 7.819415 CACACTCCAAGAAACAATGAGTCTATA 59.181 37.037 0.00 0.00 34.21 1.31
2545 2607 8.375506 ACACTCCAAGAAACAATGAGTCTATAA 58.624 33.333 0.00 0.00 34.21 0.98
2546 2608 8.660373 CACTCCAAGAAACAATGAGTCTATAAC 58.340 37.037 0.00 0.00 34.21 1.89
2547 2609 7.824779 ACTCCAAGAAACAATGAGTCTATAACC 59.175 37.037 0.00 0.00 30.81 2.85
2548 2610 7.918076 TCCAAGAAACAATGAGTCTATAACCT 58.082 34.615 0.00 0.00 0.00 3.50
2549 2611 9.042450 TCCAAGAAACAATGAGTCTATAACCTA 57.958 33.333 0.00 0.00 0.00 3.08
2550 2612 9.667107 CCAAGAAACAATGAGTCTATAACCTAA 57.333 33.333 0.00 0.00 0.00 2.69
2569 2631 8.445275 AACCTAATAAATACATCGTTGCATGA 57.555 30.769 0.00 0.00 0.00 3.07
2570 2632 7.861630 ACCTAATAAATACATCGTTGCATGAC 58.138 34.615 0.00 0.00 0.00 3.06
2571 2633 7.497579 ACCTAATAAATACATCGTTGCATGACA 59.502 33.333 0.00 0.00 0.00 3.58
2572 2634 7.798516 CCTAATAAATACATCGTTGCATGACAC 59.201 37.037 0.00 0.00 0.00 3.67
2573 2635 6.925610 ATAAATACATCGTTGCATGACACT 57.074 33.333 0.00 0.00 0.00 3.55
2574 2636 8.432110 AATAAATACATCGTTGCATGACACTA 57.568 30.769 0.00 0.00 0.00 2.74
2575 2637 5.718649 AATACATCGTTGCATGACACTAC 57.281 39.130 0.00 0.00 0.00 2.73
2576 2638 3.038788 ACATCGTTGCATGACACTACA 57.961 42.857 0.00 0.00 0.00 2.74
2577 2639 3.599343 ACATCGTTGCATGACACTACAT 58.401 40.909 0.00 0.00 0.00 2.29
2578 2640 4.754322 ACATCGTTGCATGACACTACATA 58.246 39.130 0.00 0.00 0.00 2.29
2579 2641 4.805719 ACATCGTTGCATGACACTACATAG 59.194 41.667 0.00 0.00 0.00 2.23
2580 2642 4.712122 TCGTTGCATGACACTACATAGA 57.288 40.909 0.00 0.00 0.00 1.98
2581 2643 5.262588 TCGTTGCATGACACTACATAGAT 57.737 39.130 0.00 0.00 0.00 1.98
2582 2644 5.043248 TCGTTGCATGACACTACATAGATG 58.957 41.667 0.00 0.00 0.00 2.90
2583 2645 4.805719 CGTTGCATGACACTACATAGATGT 59.194 41.667 0.00 0.08 44.48 3.06
2584 2646 5.291858 CGTTGCATGACACTACATAGATGTT 59.708 40.000 0.00 0.00 41.97 2.71
2585 2647 6.508563 CGTTGCATGACACTACATAGATGTTC 60.509 42.308 0.00 0.00 41.97 3.18
2586 2648 5.359756 TGCATGACACTACATAGATGTTCC 58.640 41.667 0.00 0.00 41.97 3.62
2587 2649 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
2588 2650 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
2589 2651 7.015584 TGCATGACACTACATAGATGTTCCTAT 59.984 37.037 0.00 0.00 41.97 2.57
2590 2652 7.543868 GCATGACACTACATAGATGTTCCTATC 59.456 40.741 0.00 0.00 41.97 2.08
2591 2653 7.526142 TGACACTACATAGATGTTCCTATCC 57.474 40.000 0.00 0.00 41.97 2.59
2592 2654 7.066781 TGACACTACATAGATGTTCCTATCCA 58.933 38.462 0.00 0.00 41.97 3.41
2593 2655 7.014326 TGACACTACATAGATGTTCCTATCCAC 59.986 40.741 0.00 0.00 41.97 4.02
2594 2656 7.069986 ACACTACATAGATGTTCCTATCCACT 58.930 38.462 0.00 0.00 41.97 4.00
2595 2657 8.225416 ACACTACATAGATGTTCCTATCCACTA 58.775 37.037 0.00 0.00 41.97 2.74
2596 2658 9.249053 CACTACATAGATGTTCCTATCCACTAT 57.751 37.037 0.00 0.00 41.97 2.12
2597 2659 9.249053 ACTACATAGATGTTCCTATCCACTATG 57.751 37.037 0.00 0.00 41.97 2.23
2598 2660 9.467796 CTACATAGATGTTCCTATCCACTATGA 57.532 37.037 1.97 0.00 41.97 2.15
2599 2661 8.727100 ACATAGATGTTCCTATCCACTATGAA 57.273 34.615 1.97 0.00 37.90 2.57
2600 2662 8.811017 ACATAGATGTTCCTATCCACTATGAAG 58.189 37.037 1.97 0.00 37.90 3.02
2601 2663 6.678568 AGATGTTCCTATCCACTATGAAGG 57.321 41.667 0.00 0.00 0.00 3.46
2602 2664 6.146760 AGATGTTCCTATCCACTATGAAGGT 58.853 40.000 0.00 0.00 0.00 3.50
2603 2665 7.306013 AGATGTTCCTATCCACTATGAAGGTA 58.694 38.462 0.00 0.00 0.00 3.08
2604 2666 6.978674 TGTTCCTATCCACTATGAAGGTAG 57.021 41.667 0.00 0.00 0.00 3.18
2605 2667 6.441222 TGTTCCTATCCACTATGAAGGTAGT 58.559 40.000 0.00 0.00 35.34 2.73
2606 2668 7.589081 TGTTCCTATCCACTATGAAGGTAGTA 58.411 38.462 0.00 0.00 33.29 1.82
2607 2669 8.063153 TGTTCCTATCCACTATGAAGGTAGTAA 58.937 37.037 0.00 0.00 33.29 2.24
2608 2670 8.358895 GTTCCTATCCACTATGAAGGTAGTAAC 58.641 40.741 0.00 0.00 33.29 2.50
2609 2671 7.589081 TCCTATCCACTATGAAGGTAGTAACA 58.411 38.462 0.00 0.00 33.29 2.41
2610 2672 8.232412 TCCTATCCACTATGAAGGTAGTAACAT 58.768 37.037 0.00 0.00 33.29 2.71
2611 2673 9.529823 CCTATCCACTATGAAGGTAGTAACATA 57.470 37.037 0.00 0.00 33.29 2.29
2614 2676 8.461249 TCCACTATGAAGGTAGTAACATAGTC 57.539 38.462 13.37 0.00 46.61 2.59
2615 2677 8.280084 TCCACTATGAAGGTAGTAACATAGTCT 58.720 37.037 13.37 0.00 46.61 3.24
2616 2678 9.570468 CCACTATGAAGGTAGTAACATAGTCTA 57.430 37.037 13.37 0.00 46.61 2.59
2618 2680 9.796180 ACTATGAAGGTAGTAACATAGTCTAGG 57.204 37.037 0.00 0.00 46.61 3.02
2619 2681 9.233649 CTATGAAGGTAGTAACATAGTCTAGGG 57.766 40.741 0.00 0.00 38.06 3.53
2620 2682 7.217028 TGAAGGTAGTAACATAGTCTAGGGA 57.783 40.000 0.00 0.00 0.00 4.20
2621 2683 7.645942 TGAAGGTAGTAACATAGTCTAGGGAA 58.354 38.462 0.00 0.00 0.00 3.97
2622 2684 8.117956 TGAAGGTAGTAACATAGTCTAGGGAAA 58.882 37.037 0.00 0.00 0.00 3.13
2623 2685 9.145442 GAAGGTAGTAACATAGTCTAGGGAAAT 57.855 37.037 0.00 0.00 0.00 2.17
2624 2686 8.480133 AGGTAGTAACATAGTCTAGGGAAATG 57.520 38.462 0.00 0.00 0.00 2.32
2625 2687 8.066247 AGGTAGTAACATAGTCTAGGGAAATGT 58.934 37.037 0.00 0.00 34.09 2.71
2626 2688 8.142551 GGTAGTAACATAGTCTAGGGAAATGTG 58.857 40.741 0.00 0.00 33.44 3.21
2627 2689 7.735326 AGTAACATAGTCTAGGGAAATGTGT 57.265 36.000 0.00 0.00 33.44 3.72
2628 2690 8.834004 AGTAACATAGTCTAGGGAAATGTGTA 57.166 34.615 0.00 0.00 33.44 2.90
2629 2691 9.263446 AGTAACATAGTCTAGGGAAATGTGTAA 57.737 33.333 0.00 0.00 33.44 2.41
2630 2692 9.530633 GTAACATAGTCTAGGGAAATGTGTAAG 57.469 37.037 0.00 0.00 33.44 2.34
2631 2693 7.735326 ACATAGTCTAGGGAAATGTGTAAGT 57.265 36.000 0.00 0.00 32.54 2.24
2632 2694 8.147244 ACATAGTCTAGGGAAATGTGTAAGTT 57.853 34.615 0.00 0.00 32.54 2.66
2633 2695 9.263446 ACATAGTCTAGGGAAATGTGTAAGTTA 57.737 33.333 0.00 0.00 32.54 2.24
2634 2696 9.530633 CATAGTCTAGGGAAATGTGTAAGTTAC 57.469 37.037 6.06 6.06 0.00 2.50
2635 2697 7.793948 AGTCTAGGGAAATGTGTAAGTTACT 57.206 36.000 14.00 0.00 0.00 2.24
2636 2698 8.890410 AGTCTAGGGAAATGTGTAAGTTACTA 57.110 34.615 14.00 4.12 0.00 1.82
2637 2699 8.968969 AGTCTAGGGAAATGTGTAAGTTACTAG 58.031 37.037 14.00 4.64 0.00 2.57
2638 2700 7.705752 GTCTAGGGAAATGTGTAAGTTACTAGC 59.294 40.741 14.00 5.48 0.00 3.42
2639 2701 6.622427 AGGGAAATGTGTAAGTTACTAGCT 57.378 37.500 14.00 0.00 0.00 3.32
2640 2702 7.017319 AGGGAAATGTGTAAGTTACTAGCTT 57.983 36.000 14.00 3.28 0.00 3.74
2641 2703 8.142485 AGGGAAATGTGTAAGTTACTAGCTTA 57.858 34.615 14.00 0.00 0.00 3.09
2642 2704 8.769359 AGGGAAATGTGTAAGTTACTAGCTTAT 58.231 33.333 14.00 0.00 32.01 1.73
2643 2705 8.827677 GGGAAATGTGTAAGTTACTAGCTTATG 58.172 37.037 14.00 0.00 32.01 1.90
2644 2706 9.379791 GGAAATGTGTAAGTTACTAGCTTATGT 57.620 33.333 14.00 0.00 32.01 2.29
2652 2714 9.526713 GTAAGTTACTAGCTTATGTTCTTACCC 57.473 37.037 5.75 6.90 32.82 3.69
2653 2715 7.729124 AGTTACTAGCTTATGTTCTTACCCA 57.271 36.000 0.00 0.00 0.00 4.51
2654 2716 8.320338 AGTTACTAGCTTATGTTCTTACCCAT 57.680 34.615 0.00 0.00 0.00 4.00
2655 2717 8.769359 AGTTACTAGCTTATGTTCTTACCCATT 58.231 33.333 0.00 0.00 0.00 3.16
2656 2718 8.827677 GTTACTAGCTTATGTTCTTACCCATTG 58.172 37.037 0.00 0.00 0.00 2.82
2657 2719 6.958767 ACTAGCTTATGTTCTTACCCATTGT 58.041 36.000 0.00 0.00 0.00 2.71
2658 2720 6.823689 ACTAGCTTATGTTCTTACCCATTGTG 59.176 38.462 0.00 0.00 0.00 3.33
2659 2721 5.815581 AGCTTATGTTCTTACCCATTGTGA 58.184 37.500 0.00 0.00 0.00 3.58
2660 2722 5.648092 AGCTTATGTTCTTACCCATTGTGAC 59.352 40.000 0.00 0.00 0.00 3.67
2661 2723 5.163652 GCTTATGTTCTTACCCATTGTGACC 60.164 44.000 0.00 0.00 0.00 4.02
2662 2724 3.866703 TGTTCTTACCCATTGTGACCA 57.133 42.857 0.00 0.00 0.00 4.02
2668 2730 1.072266 ACCCATTGTGACCAGCCTTA 58.928 50.000 0.00 0.00 0.00 2.69
2689 2751 6.205464 CCTTACAGAGAAGAATGCTCAAACAA 59.795 38.462 0.00 0.00 46.10 2.83
2702 2766 2.482721 CTCAAACAACCGCCTATTTCGT 59.517 45.455 0.00 0.00 0.00 3.85
2708 2772 0.616891 ACCGCCTATTTCGTCCCTTT 59.383 50.000 0.00 0.00 0.00 3.11
2716 2780 4.760204 CCTATTTCGTCCCTTTCACAAGTT 59.240 41.667 0.00 0.00 0.00 2.66
2725 2789 3.384467 CCCTTTCACAAGTTCCAACATGT 59.616 43.478 0.00 0.00 41.02 3.21
2731 2795 4.023279 TCACAAGTTCCAACATGTATGTGC 60.023 41.667 0.00 0.00 38.62 4.57
2732 2796 3.888323 ACAAGTTCCAACATGTATGTGCA 59.112 39.130 0.00 0.00 38.86 4.57
2733 2797 4.523943 ACAAGTTCCAACATGTATGTGCAT 59.476 37.500 0.00 0.00 38.86 3.96
2734 2798 5.709631 ACAAGTTCCAACATGTATGTGCATA 59.290 36.000 0.00 0.00 38.86 3.14
2793 2875 1.675641 GAACAGAGGTGGCCGCATT 60.676 57.895 19.98 5.30 0.00 3.56
2794 2876 0.392461 GAACAGAGGTGGCCGCATTA 60.392 55.000 19.98 0.00 0.00 1.90
2795 2877 0.676782 AACAGAGGTGGCCGCATTAC 60.677 55.000 19.98 0.00 0.00 1.89
2796 2878 1.078497 CAGAGGTGGCCGCATTACA 60.078 57.895 19.98 0.00 0.00 2.41
2797 2879 1.078426 AGAGGTGGCCGCATTACAC 60.078 57.895 19.98 0.00 0.00 2.90
2798 2880 1.078426 GAGGTGGCCGCATTACACT 60.078 57.895 19.98 4.18 35.53 3.55
2799 2881 1.078426 AGGTGGCCGCATTACACTC 60.078 57.895 19.98 0.00 35.53 3.51
2800 2882 1.078426 GGTGGCCGCATTACACTCT 60.078 57.895 19.98 0.00 35.53 3.24
2801 2883 1.090052 GGTGGCCGCATTACACTCTC 61.090 60.000 19.98 0.00 35.53 3.20
2802 2884 1.090052 GTGGCCGCATTACACTCTCC 61.090 60.000 12.58 0.00 32.58 3.71
2803 2885 1.220749 GGCCGCATTACACTCTCCA 59.779 57.895 0.00 0.00 0.00 3.86
2804 2886 0.392461 GGCCGCATTACACTCTCCAA 60.392 55.000 0.00 0.00 0.00 3.53
2805 2887 1.009829 GCCGCATTACACTCTCCAAG 58.990 55.000 0.00 0.00 0.00 3.61
2806 2888 1.405526 GCCGCATTACACTCTCCAAGA 60.406 52.381 0.00 0.00 0.00 3.02
2808 2890 2.166459 CCGCATTACACTCTCCAAGAGA 59.834 50.000 10.81 0.16 45.07 3.10
2823 2905 6.029346 TCCAAGAGAGAATTCATTTTTGGC 57.971 37.500 18.78 0.00 0.00 4.52
2824 2906 5.047092 TCCAAGAGAGAATTCATTTTTGGCC 60.047 40.000 18.78 0.00 0.00 5.36
2825 2907 5.046807 CCAAGAGAGAATTCATTTTTGGCCT 60.047 40.000 8.44 0.00 0.00 5.19
2826 2908 6.461640 CAAGAGAGAATTCATTTTTGGCCTT 58.538 36.000 8.44 0.00 0.00 4.35
2827 2909 6.278172 AGAGAGAATTCATTTTTGGCCTTC 57.722 37.500 8.44 0.00 0.00 3.46
2828 2910 5.186603 AGAGAGAATTCATTTTTGGCCTTCC 59.813 40.000 8.44 0.00 0.00 3.46
2829 2911 5.089434 AGAGAATTCATTTTTGGCCTTCCT 58.911 37.500 8.44 0.00 0.00 3.36
2830 2912 5.545335 AGAGAATTCATTTTTGGCCTTCCTT 59.455 36.000 8.44 0.00 0.00 3.36
2831 2913 6.725834 AGAGAATTCATTTTTGGCCTTCCTTA 59.274 34.615 8.44 0.00 0.00 2.69
2832 2914 7.235399 AGAGAATTCATTTTTGGCCTTCCTTAA 59.765 33.333 8.44 0.00 0.00 1.85
2833 2915 7.744733 AGAATTCATTTTTGGCCTTCCTTAAA 58.255 30.769 8.44 0.00 0.00 1.52
2834 2916 8.385491 AGAATTCATTTTTGGCCTTCCTTAAAT 58.615 29.630 8.44 0.00 31.14 1.40
2835 2917 8.938801 AATTCATTTTTGGCCTTCCTTAAATT 57.061 26.923 3.32 0.38 29.69 1.82
2836 2918 8.938801 ATTCATTTTTGGCCTTCCTTAAATTT 57.061 26.923 3.32 0.00 29.69 1.82
2837 2919 8.759481 TTCATTTTTGGCCTTCCTTAAATTTT 57.241 26.923 3.32 0.00 29.69 1.82
2838 2920 8.759481 TCATTTTTGGCCTTCCTTAAATTTTT 57.241 26.923 3.32 0.00 29.69 1.94
2839 2921 8.628280 TCATTTTTGGCCTTCCTTAAATTTTTG 58.372 29.630 3.32 0.00 29.69 2.44
2840 2922 7.946381 TTTTTGGCCTTCCTTAAATTTTTGT 57.054 28.000 3.32 0.00 0.00 2.83
2841 2923 7.946381 TTTTGGCCTTCCTTAAATTTTTGTT 57.054 28.000 3.32 0.00 0.00 2.83
2842 2924 7.946381 TTTGGCCTTCCTTAAATTTTTGTTT 57.054 28.000 3.32 0.00 0.00 2.83
2843 2925 7.561021 TTGGCCTTCCTTAAATTTTTGTTTC 57.439 32.000 3.32 0.00 0.00 2.78
2844 2926 6.058833 TGGCCTTCCTTAAATTTTTGTTTCC 58.941 36.000 3.32 0.00 0.00 3.13
2845 2927 6.126623 TGGCCTTCCTTAAATTTTTGTTTCCT 60.127 34.615 3.32 0.00 0.00 3.36
2846 2928 6.426937 GGCCTTCCTTAAATTTTTGTTTCCTC 59.573 38.462 0.00 0.00 0.00 3.71
2847 2929 7.217200 GCCTTCCTTAAATTTTTGTTTCCTCT 58.783 34.615 0.00 0.00 0.00 3.69
2848 2930 7.715249 GCCTTCCTTAAATTTTTGTTTCCTCTT 59.285 33.333 0.00 0.00 0.00 2.85
2849 2931 9.613428 CCTTCCTTAAATTTTTGTTTCCTCTTT 57.387 29.630 0.00 0.00 0.00 2.52
2851 2933 8.956533 TCCTTAAATTTTTGTTTCCTCTTTGG 57.043 30.769 0.00 0.00 37.10 3.28
2852 2934 8.544622 TCCTTAAATTTTTGTTTCCTCTTTGGT 58.455 29.630 0.00 0.00 37.07 3.67
2853 2935 9.173021 CCTTAAATTTTTGTTTCCTCTTTGGTT 57.827 29.630 0.00 0.00 37.07 3.67
2855 2937 9.952030 TTAAATTTTTGTTTCCTCTTTGGTTCT 57.048 25.926 0.00 0.00 37.07 3.01
2857 2939 9.599866 AAATTTTTGTTTCCTCTTTGGTTCTAG 57.400 29.630 0.00 0.00 37.07 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 6.183810 TGCTGATCATGATAGAATGAAGGT 57.816 37.500 8.54 0.00 39.90 3.50
299 301 1.140452 AGATACTAGAGGGCGACGACA 59.860 52.381 1.63 0.00 0.00 4.35
400 402 5.938125 TGTGCTTGATAGAGTTTTTACCTCC 59.062 40.000 0.00 0.00 0.00 4.30
598 600 7.781324 AAGAGCTTCTAATTTTCATGGGAAA 57.219 32.000 0.00 0.00 41.13 3.13
599 601 8.877864 TTAAGAGCTTCTAATTTTCATGGGAA 57.122 30.769 0.00 0.00 0.00 3.97
600 602 9.479549 AATTAAGAGCTTCTAATTTTCATGGGA 57.520 29.630 7.73 0.00 0.00 4.37
606 608 9.794685 CCAGGAAATTAAGAGCTTCTAATTTTC 57.205 33.333 19.61 18.39 33.75 2.29
607 609 8.753133 CCCAGGAAATTAAGAGCTTCTAATTTT 58.247 33.333 19.61 8.96 33.75 1.82
614 616 6.590234 TTTTCCCAGGAAATTAAGAGCTTC 57.410 37.500 12.50 0.00 42.71 3.86
725 730 1.308069 CGGCAGGTGATTTGGTGGAG 61.308 60.000 0.00 0.00 0.00 3.86
736 741 1.586028 CCAACATTTCCGGCAGGTG 59.414 57.895 1.81 0.00 39.05 4.00
741 746 2.212900 GACCTGCCAACATTTCCGGC 62.213 60.000 0.00 0.00 46.43 6.13
758 763 3.596214 TGCTACGGAATTTTCTCTGGAC 58.404 45.455 0.00 0.00 0.00 4.02
787 792 2.651361 CAGTCGCCCACGTTCTCT 59.349 61.111 0.00 0.00 41.18 3.10
815 820 1.614241 TTCCTCTCCGCTTACCTGCC 61.614 60.000 0.00 0.00 0.00 4.85
853 858 1.065709 TCGGGGCTTTTGTGGAGATAC 60.066 52.381 0.00 0.00 0.00 2.24
880 885 2.071778 ACACCACAGAATTGCAAGGT 57.928 45.000 4.94 2.24 0.00 3.50
881 886 2.288395 GGAACACCACAGAATTGCAAGG 60.288 50.000 4.94 1.51 0.00 3.61
882 887 2.624838 AGGAACACCACAGAATTGCAAG 59.375 45.455 4.94 0.00 0.00 4.01
884 889 1.955778 CAGGAACACCACAGAATTGCA 59.044 47.619 0.00 0.00 0.00 4.08
902 911 2.036992 GAGGATATGGCTGTGGACTCAG 59.963 54.545 0.00 0.00 38.35 3.35
903 912 2.042464 GAGGATATGGCTGTGGACTCA 58.958 52.381 0.00 0.00 0.00 3.41
977 998 7.970061 CCATCTTCATCTTCTCTCGATTCTATC 59.030 40.741 0.00 0.00 0.00 2.08
978 999 7.577426 GCCATCTTCATCTTCTCTCGATTCTAT 60.577 40.741 0.00 0.00 0.00 1.98
979 1000 6.294453 GCCATCTTCATCTTCTCTCGATTCTA 60.294 42.308 0.00 0.00 0.00 2.10
985 1008 3.731652 AGCCATCTTCATCTTCTCTCG 57.268 47.619 0.00 0.00 0.00 4.04
1146 1175 1.007734 GTTGCACTCGGAGTCGTCA 60.008 57.895 7.89 4.06 37.69 4.35
1212 1241 4.876107 ACAACAACAAGAAGAAGACACGAT 59.124 37.500 0.00 0.00 0.00 3.73
1225 1254 3.365832 CAGCAGCAGTAACAACAACAAG 58.634 45.455 0.00 0.00 0.00 3.16
1237 1266 1.554160 AGTTCAGATAGCAGCAGCAGT 59.446 47.619 3.17 0.00 45.49 4.40
1247 1276 4.694509 GCAGGCATATCCAAGTTCAGATAG 59.305 45.833 0.00 0.00 37.29 2.08
1268 1300 4.753662 AGGCTCCCGACCTACGCA 62.754 66.667 0.00 0.00 41.07 5.24
1463 1505 1.761784 AGCTTGAGATGCCGAGAAGAT 59.238 47.619 0.00 0.00 0.00 2.40
1668 1710 0.249398 AGTATTCCGTGGTCTGCACC 59.751 55.000 0.00 0.00 44.10 5.01
1680 1722 4.620937 GGCGGGCCGGAGTATTCC 62.621 72.222 29.48 14.63 40.33 3.01
1681 1723 3.516866 GAGGCGGGCCGGAGTATTC 62.517 68.421 29.48 8.63 41.95 1.75
1863 1911 2.032722 GTCTCACGCTCACCGAGTATAG 60.033 54.545 0.00 0.00 41.02 1.31
1869 1922 3.733960 CCGTCTCACGCTCACCGA 61.734 66.667 0.00 0.00 40.91 4.69
1895 1948 7.669427 TGTCTTCCACATCAAATTTATGCTTT 58.331 30.769 0.00 0.00 0.00 3.51
1959 2012 3.381590 GGCCTGTCAAACTCTTCAAACTT 59.618 43.478 0.00 0.00 0.00 2.66
1978 2031 3.233355 ACATGAGTGAAGAACGGCC 57.767 52.632 0.00 0.00 0.00 6.13
2050 2103 0.536233 ACTGGCAATTACGCACACCA 60.536 50.000 0.00 0.00 0.00 4.17
2052 2105 2.482721 AGTAACTGGCAATTACGCACAC 59.517 45.455 12.58 0.00 37.56 3.82
2053 2106 2.773487 AGTAACTGGCAATTACGCACA 58.227 42.857 12.58 0.00 37.56 4.57
2054 2107 3.824414 AAGTAACTGGCAATTACGCAC 57.176 42.857 12.58 0.00 37.56 5.34
2056 2109 5.986004 AGATAAGTAACTGGCAATTACGC 57.014 39.130 12.58 4.97 37.56 4.42
2057 2110 6.183360 TGCAAGATAAGTAACTGGCAATTACG 60.183 38.462 12.58 0.00 39.67 3.18
2058 2111 7.083875 TGCAAGATAAGTAACTGGCAATTAC 57.916 36.000 10.67 10.67 39.67 1.89
2059 2112 7.880160 ATGCAAGATAAGTAACTGGCAATTA 57.120 32.000 2.19 0.00 44.56 1.40
2060 2113 6.780457 ATGCAAGATAAGTAACTGGCAATT 57.220 33.333 2.19 0.00 44.56 2.32
2061 2114 6.263168 GGTATGCAAGATAAGTAACTGGCAAT 59.737 38.462 2.19 0.00 44.56 3.56
2062 2115 5.588648 GGTATGCAAGATAAGTAACTGGCAA 59.411 40.000 2.19 0.00 44.56 4.52
2063 2116 5.123227 GGTATGCAAGATAAGTAACTGGCA 58.877 41.667 0.00 0.00 45.30 4.92
2064 2117 5.123227 TGGTATGCAAGATAAGTAACTGGC 58.877 41.667 0.00 0.00 34.07 4.85
2065 2118 6.349300 ACTGGTATGCAAGATAAGTAACTGG 58.651 40.000 0.00 0.00 0.00 4.00
2134 2187 3.755112 TTCCGTGGAGATGTTGTAACA 57.245 42.857 0.00 0.00 44.06 2.41
2135 2188 6.920569 ATATTTCCGTGGAGATGTTGTAAC 57.079 37.500 2.34 0.00 0.00 2.50
2136 2189 9.268268 GATTATATTTCCGTGGAGATGTTGTAA 57.732 33.333 2.34 0.00 0.00 2.41
2137 2190 7.876068 GGATTATATTTCCGTGGAGATGTTGTA 59.124 37.037 2.34 0.00 0.00 2.41
2138 2191 6.710744 GGATTATATTTCCGTGGAGATGTTGT 59.289 38.462 2.34 0.00 0.00 3.32
2139 2192 6.710295 TGGATTATATTTCCGTGGAGATGTTG 59.290 38.462 2.34 0.00 35.94 3.33
2140 2193 6.837312 TGGATTATATTTCCGTGGAGATGTT 58.163 36.000 2.34 0.00 35.94 2.71
2141 2194 6.043243 ACTGGATTATATTTCCGTGGAGATGT 59.957 38.462 2.34 0.00 35.94 3.06
2152 2205 9.952188 GGTTGCTAAAAGACTGGATTATATTTC 57.048 33.333 0.00 0.00 0.00 2.17
2160 2213 2.711542 CCGGTTGCTAAAAGACTGGAT 58.288 47.619 0.00 0.00 41.39 3.41
2167 2220 0.589223 TCGTTGCCGGTTGCTAAAAG 59.411 50.000 1.90 0.00 42.00 2.27
2193 2246 8.990693 ATTTTGGTATGGAGGGAGTACTATAT 57.009 34.615 0.00 0.00 0.00 0.86
2198 2251 8.877195 TCTTATATTTTGGTATGGAGGGAGTAC 58.123 37.037 0.00 0.00 0.00 2.73
2199 2252 9.629649 ATCTTATATTTTGGTATGGAGGGAGTA 57.370 33.333 0.00 0.00 0.00 2.59
2200 2253 7.947782 TCTTATATTTTGGTATGGAGGGAGT 57.052 36.000 0.00 0.00 0.00 3.85
2201 2254 8.386264 ACATCTTATATTTTGGTATGGAGGGAG 58.614 37.037 0.00 0.00 0.00 4.30
2202 2255 8.287904 ACATCTTATATTTTGGTATGGAGGGA 57.712 34.615 0.00 0.00 0.00 4.20
2203 2256 8.940397 AACATCTTATATTTTGGTATGGAGGG 57.060 34.615 0.00 0.00 0.00 4.30
2211 2264 9.777297 AACTGCAAAAACATCTTATATTTTGGT 57.223 25.926 10.66 0.81 41.02 3.67
2218 2271 9.891828 CTGTGTAAACTGCAAAAACATCTTATA 57.108 29.630 0.00 0.00 0.00 0.98
2219 2272 7.867403 CCTGTGTAAACTGCAAAAACATCTTAT 59.133 33.333 0.00 0.00 0.00 1.73
2220 2273 7.147983 ACCTGTGTAAACTGCAAAAACATCTTA 60.148 33.333 0.00 0.00 0.00 2.10
2221 2274 6.042143 CCTGTGTAAACTGCAAAAACATCTT 58.958 36.000 0.00 0.00 0.00 2.40
2222 2275 5.127031 ACCTGTGTAAACTGCAAAAACATCT 59.873 36.000 0.00 0.00 0.00 2.90
2223 2276 5.348164 ACCTGTGTAAACTGCAAAAACATC 58.652 37.500 0.00 0.00 0.00 3.06
2224 2277 5.337578 ACCTGTGTAAACTGCAAAAACAT 57.662 34.783 0.00 0.00 0.00 2.71
2225 2278 4.792521 ACCTGTGTAAACTGCAAAAACA 57.207 36.364 0.00 0.00 0.00 2.83
2226 2279 5.886992 ACTACCTGTGTAAACTGCAAAAAC 58.113 37.500 0.00 0.00 0.00 2.43
2227 2280 7.811117 ATACTACCTGTGTAAACTGCAAAAA 57.189 32.000 0.00 0.00 0.00 1.94
2228 2281 7.499563 TGAATACTACCTGTGTAAACTGCAAAA 59.500 33.333 0.00 0.00 0.00 2.44
2229 2282 6.993308 TGAATACTACCTGTGTAAACTGCAAA 59.007 34.615 0.00 0.00 0.00 3.68
2230 2283 6.526526 TGAATACTACCTGTGTAAACTGCAA 58.473 36.000 0.00 0.00 0.00 4.08
2231 2284 6.014925 TCTGAATACTACCTGTGTAAACTGCA 60.015 38.462 0.00 0.00 0.00 4.41
2232 2285 6.395629 TCTGAATACTACCTGTGTAAACTGC 58.604 40.000 0.00 0.00 0.00 4.40
2233 2286 7.545965 CCTTCTGAATACTACCTGTGTAAACTG 59.454 40.741 0.00 0.00 0.00 3.16
2234 2287 7.453752 TCCTTCTGAATACTACCTGTGTAAACT 59.546 37.037 0.00 0.00 0.00 2.66
2235 2288 7.609056 TCCTTCTGAATACTACCTGTGTAAAC 58.391 38.462 0.00 0.00 0.00 2.01
2236 2289 7.786046 TCCTTCTGAATACTACCTGTGTAAA 57.214 36.000 0.00 0.00 0.00 2.01
2237 2290 7.786046 TTCCTTCTGAATACTACCTGTGTAA 57.214 36.000 0.00 0.00 0.00 2.41
2238 2291 7.973048 ATTCCTTCTGAATACTACCTGTGTA 57.027 36.000 0.00 0.00 41.96 2.90
2239 2292 6.875972 ATTCCTTCTGAATACTACCTGTGT 57.124 37.500 0.00 0.00 41.96 3.72
2240 2293 9.265901 CATTATTCCTTCTGAATACTACCTGTG 57.734 37.037 0.00 0.00 43.87 3.66
2241 2294 9.213777 TCATTATTCCTTCTGAATACTACCTGT 57.786 33.333 0.00 0.00 43.87 4.00
2248 2301 9.442047 CCCTGTATCATTATTCCTTCTGAATAC 57.558 37.037 0.00 0.00 43.87 1.89
2286 2342 0.742281 CGAATCACCACCTGAGCCTG 60.742 60.000 0.00 0.00 30.20 4.85
2319 2381 2.159476 CCACAACATCTTCTCATTGGCG 60.159 50.000 0.00 0.00 0.00 5.69
2323 2385 3.245016 TGAGCCCACAACATCTTCTCATT 60.245 43.478 0.00 0.00 0.00 2.57
2331 2393 0.961019 TTGCTTGAGCCCACAACATC 59.039 50.000 0.00 0.00 41.18 3.06
2338 2400 3.642848 AGATTTTCTTTTGCTTGAGCCCA 59.357 39.130 0.00 0.00 41.18 5.36
2356 2418 5.582665 GTCCTTCGTCTGATTAAGCAAGATT 59.417 40.000 0.00 0.00 0.00 2.40
2373 2435 0.976073 TAAGGCCCTGGAGTCCTTCG 60.976 60.000 11.33 0.00 40.42 3.79
2390 2452 0.331278 CCCCATTGTGACCAGCCTAA 59.669 55.000 0.00 0.00 0.00 2.69
2393 2455 1.379044 CTCCCCATTGTGACCAGCC 60.379 63.158 0.00 0.00 0.00 4.85
2394 2456 1.379044 CCTCCCCATTGTGACCAGC 60.379 63.158 0.00 0.00 0.00 4.85
2397 2459 0.698818 AGTTCCTCCCCATTGTGACC 59.301 55.000 0.00 0.00 0.00 4.02
2399 2461 3.913799 TCTTAAGTTCCTCCCCATTGTGA 59.086 43.478 1.63 0.00 0.00 3.58
2400 2462 4.263506 ACTCTTAAGTTCCTCCCCATTGTG 60.264 45.833 1.63 0.00 28.74 3.33
2401 2463 3.916989 ACTCTTAAGTTCCTCCCCATTGT 59.083 43.478 1.63 0.00 28.74 2.71
2402 2464 4.576330 ACTCTTAAGTTCCTCCCCATTG 57.424 45.455 1.63 0.00 28.74 2.82
2405 2467 4.495565 TGTTACTCTTAAGTTCCTCCCCA 58.504 43.478 1.63 0.00 36.92 4.96
2406 2468 5.189145 TGATGTTACTCTTAAGTTCCTCCCC 59.811 44.000 1.63 0.00 36.92 4.81
2410 2472 6.929606 GTGTGTGATGTTACTCTTAAGTTCCT 59.070 38.462 1.63 0.00 36.92 3.36
2411 2473 6.929606 AGTGTGTGATGTTACTCTTAAGTTCC 59.070 38.462 1.63 0.00 36.92 3.62
2412 2474 7.116519 GGAGTGTGTGATGTTACTCTTAAGTTC 59.883 40.741 1.63 0.00 39.50 3.01
2413 2475 6.929606 GGAGTGTGTGATGTTACTCTTAAGTT 59.070 38.462 1.63 0.00 39.50 2.66
2414 2476 6.041637 TGGAGTGTGTGATGTTACTCTTAAGT 59.958 38.462 1.63 0.00 39.50 2.24
2416 2478 6.413783 TGGAGTGTGTGATGTTACTCTTAA 57.586 37.500 0.00 0.00 39.50 1.85
2417 2479 6.413783 TTGGAGTGTGTGATGTTACTCTTA 57.586 37.500 0.00 0.00 39.50 2.10
2418 2480 4.955811 TGGAGTGTGTGATGTTACTCTT 57.044 40.909 0.00 0.00 39.50 2.85
2419 2481 4.955811 TTGGAGTGTGTGATGTTACTCT 57.044 40.909 0.00 0.00 39.50 3.24
2420 2482 6.163476 TGTATTGGAGTGTGTGATGTTACTC 58.837 40.000 0.00 0.00 38.98 2.59
2421 2483 6.109156 TGTATTGGAGTGTGTGATGTTACT 57.891 37.500 0.00 0.00 0.00 2.24
2422 2484 6.426937 AGTTGTATTGGAGTGTGTGATGTTAC 59.573 38.462 0.00 0.00 0.00 2.50
2423 2485 6.530120 AGTTGTATTGGAGTGTGTGATGTTA 58.470 36.000 0.00 0.00 0.00 2.41
2424 2486 5.376625 AGTTGTATTGGAGTGTGTGATGTT 58.623 37.500 0.00 0.00 0.00 2.71
2425 2487 4.973168 AGTTGTATTGGAGTGTGTGATGT 58.027 39.130 0.00 0.00 0.00 3.06
2426 2488 5.947228 AAGTTGTATTGGAGTGTGTGATG 57.053 39.130 0.00 0.00 0.00 3.07
2427 2489 5.278463 GCAAAGTTGTATTGGAGTGTGTGAT 60.278 40.000 0.00 0.00 0.00 3.06
2428 2490 4.036262 GCAAAGTTGTATTGGAGTGTGTGA 59.964 41.667 0.00 0.00 0.00 3.58
2429 2491 4.036734 AGCAAAGTTGTATTGGAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
2430 2492 4.207165 AGCAAAGTTGTATTGGAGTGTGT 58.793 39.130 0.00 0.00 0.00 3.72
2431 2493 4.836125 AGCAAAGTTGTATTGGAGTGTG 57.164 40.909 0.00 0.00 0.00 3.82
2432 2494 6.490040 ACATAAGCAAAGTTGTATTGGAGTGT 59.510 34.615 0.00 0.00 0.00 3.55
2433 2495 6.803320 CACATAAGCAAAGTTGTATTGGAGTG 59.197 38.462 0.00 0.00 0.00 3.51
2434 2496 6.071952 CCACATAAGCAAAGTTGTATTGGAGT 60.072 38.462 0.00 0.00 0.00 3.85
2435 2497 6.324819 CCACATAAGCAAAGTTGTATTGGAG 58.675 40.000 0.00 0.00 0.00 3.86
2436 2498 5.336372 GCCACATAAGCAAAGTTGTATTGGA 60.336 40.000 0.00 0.00 0.00 3.53
2437 2499 4.864247 GCCACATAAGCAAAGTTGTATTGG 59.136 41.667 0.00 0.00 0.00 3.16
2438 2500 5.345741 GTGCCACATAAGCAAAGTTGTATTG 59.654 40.000 0.00 0.00 43.02 1.90
2439 2501 5.010516 TGTGCCACATAAGCAAAGTTGTATT 59.989 36.000 0.00 0.00 43.02 1.89
2440 2502 4.522405 TGTGCCACATAAGCAAAGTTGTAT 59.478 37.500 0.00 0.00 43.02 2.29
2441 2503 3.885901 TGTGCCACATAAGCAAAGTTGTA 59.114 39.130 0.00 0.00 43.02 2.41
2442 2504 2.692557 TGTGCCACATAAGCAAAGTTGT 59.307 40.909 0.00 0.00 43.02 3.32
2443 2505 3.367992 TGTGCCACATAAGCAAAGTTG 57.632 42.857 0.00 0.00 43.02 3.16
2444 2506 5.920193 ATATGTGCCACATAAGCAAAGTT 57.080 34.783 20.57 0.00 43.50 2.66
2445 2507 5.920193 AATATGTGCCACATAAGCAAAGT 57.080 34.783 20.57 0.54 43.50 2.66
2446 2508 8.757789 CATTAAATATGTGCCACATAAGCAAAG 58.242 33.333 20.57 8.50 43.50 2.77
2447 2509 8.473219 TCATTAAATATGTGCCACATAAGCAAA 58.527 29.630 20.57 12.83 43.50 3.68
2448 2510 8.005192 TCATTAAATATGTGCCACATAAGCAA 57.995 30.769 20.57 14.07 43.50 3.91
2449 2511 7.579761 TCATTAAATATGTGCCACATAAGCA 57.420 32.000 20.57 6.59 43.50 3.91
2450 2512 8.352201 TCTTCATTAAATATGTGCCACATAAGC 58.648 33.333 20.57 0.00 43.50 3.09
2451 2513 9.888878 CTCTTCATTAAATATGTGCCACATAAG 57.111 33.333 20.57 12.73 43.50 1.73
2452 2514 9.625747 TCTCTTCATTAAATATGTGCCACATAA 57.374 29.630 20.57 7.37 43.50 1.90
2453 2515 9.276590 CTCTCTTCATTAAATATGTGCCACATA 57.723 33.333 19.16 19.16 44.29 2.29
2454 2516 7.994911 TCTCTCTTCATTAAATATGTGCCACAT 59.005 33.333 15.69 15.69 42.35 3.21
2455 2517 7.337938 TCTCTCTTCATTAAATATGTGCCACA 58.662 34.615 0.00 0.00 0.00 4.17
2456 2518 7.041508 CCTCTCTCTTCATTAAATATGTGCCAC 60.042 40.741 0.00 0.00 0.00 5.01
2457 2519 6.994496 CCTCTCTCTTCATTAAATATGTGCCA 59.006 38.462 0.00 0.00 0.00 4.92
2458 2520 6.995091 ACCTCTCTCTTCATTAAATATGTGCC 59.005 38.462 0.00 0.00 0.00 5.01
2459 2521 7.519649 GCACCTCTCTCTTCATTAAATATGTGC 60.520 40.741 0.00 0.00 35.67 4.57
2460 2522 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
2461 2523 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
2462 2524 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
2463 2525 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
2464 2526 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
2465 2527 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
2466 2528 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
2467 2529 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
2468 2530 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
2469 2531 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
2470 2532 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
2471 2533 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
2472 2534 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
2473 2535 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
2474 2536 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
2475 2537 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
2476 2538 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
2477 2539 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
2478 2540 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
2479 2541 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
2480 2542 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
2481 2543 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
2482 2544 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
2483 2545 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
2492 2554 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
2494 2556 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
2495 2557 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
2496 2558 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
2497 2559 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
2498 2560 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
2499 2561 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
2500 2562 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
2501 2563 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
2502 2564 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
2503 2565 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
2504 2566 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
2505 2567 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
2506 2568 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
2507 2569 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
2508 2570 1.800586 CTTGGAGTGTGTGATGTTCCG 59.199 52.381 0.00 0.00 0.00 4.30
2509 2571 3.126001 TCTTGGAGTGTGTGATGTTCC 57.874 47.619 0.00 0.00 0.00 3.62
2510 2572 4.335315 TGTTTCTTGGAGTGTGTGATGTTC 59.665 41.667 0.00 0.00 0.00 3.18
2511 2573 4.269183 TGTTTCTTGGAGTGTGTGATGTT 58.731 39.130 0.00 0.00 0.00 2.71
2512 2574 3.884895 TGTTTCTTGGAGTGTGTGATGT 58.115 40.909 0.00 0.00 0.00 3.06
2513 2575 4.898829 TTGTTTCTTGGAGTGTGTGATG 57.101 40.909 0.00 0.00 0.00 3.07
2514 2576 5.132502 TCATTGTTTCTTGGAGTGTGTGAT 58.867 37.500 0.00 0.00 0.00 3.06
2515 2577 4.522114 TCATTGTTTCTTGGAGTGTGTGA 58.478 39.130 0.00 0.00 0.00 3.58
2516 2578 4.336433 ACTCATTGTTTCTTGGAGTGTGTG 59.664 41.667 0.00 0.00 37.43 3.82
2517 2579 4.526970 ACTCATTGTTTCTTGGAGTGTGT 58.473 39.130 0.00 0.00 37.43 3.72
2518 2580 4.818546 AGACTCATTGTTTCTTGGAGTGTG 59.181 41.667 0.00 0.00 38.82 3.82
2519 2581 5.041191 AGACTCATTGTTTCTTGGAGTGT 57.959 39.130 0.00 0.00 38.82 3.55
2520 2582 8.660373 GTTATAGACTCATTGTTTCTTGGAGTG 58.340 37.037 0.00 0.00 38.82 3.51
2521 2583 7.824779 GGTTATAGACTCATTGTTTCTTGGAGT 59.175 37.037 0.00 0.00 41.22 3.85
2522 2584 8.043710 AGGTTATAGACTCATTGTTTCTTGGAG 58.956 37.037 0.00 0.00 0.00 3.86
2523 2585 7.918076 AGGTTATAGACTCATTGTTTCTTGGA 58.082 34.615 0.00 0.00 0.00 3.53
2524 2586 9.667107 TTAGGTTATAGACTCATTGTTTCTTGG 57.333 33.333 0.00 0.00 0.00 3.61
2543 2605 9.549078 TCATGCAACGATGTATTTATTAGGTTA 57.451 29.630 0.00 0.00 28.42 2.85
2544 2606 8.342634 GTCATGCAACGATGTATTTATTAGGTT 58.657 33.333 0.00 0.00 28.42 3.50
2545 2607 7.497579 TGTCATGCAACGATGTATTTATTAGGT 59.502 33.333 0.00 0.00 28.42 3.08
2546 2608 7.798516 GTGTCATGCAACGATGTATTTATTAGG 59.201 37.037 0.00 0.00 28.42 2.69
2547 2609 8.551205 AGTGTCATGCAACGATGTATTTATTAG 58.449 33.333 0.00 0.00 28.42 1.73
2548 2610 8.432110 AGTGTCATGCAACGATGTATTTATTA 57.568 30.769 0.00 0.00 28.42 0.98
2549 2611 7.320443 AGTGTCATGCAACGATGTATTTATT 57.680 32.000 0.00 0.00 28.42 1.40
2550 2612 6.925610 AGTGTCATGCAACGATGTATTTAT 57.074 33.333 0.00 0.00 28.42 1.40
2551 2613 6.814146 TGTAGTGTCATGCAACGATGTATTTA 59.186 34.615 0.00 0.00 28.42 1.40
2552 2614 5.641636 TGTAGTGTCATGCAACGATGTATTT 59.358 36.000 0.00 0.00 28.42 1.40
2553 2615 5.175127 TGTAGTGTCATGCAACGATGTATT 58.825 37.500 0.00 0.00 28.42 1.89
2554 2616 4.754322 TGTAGTGTCATGCAACGATGTAT 58.246 39.130 0.00 0.00 31.41 2.29
2555 2617 4.181309 TGTAGTGTCATGCAACGATGTA 57.819 40.909 0.00 0.00 0.00 2.29
2556 2618 3.038788 TGTAGTGTCATGCAACGATGT 57.961 42.857 0.00 0.00 0.00 3.06
2557 2619 5.043248 TCTATGTAGTGTCATGCAACGATG 58.957 41.667 0.00 0.00 0.00 3.84
2558 2620 5.262588 TCTATGTAGTGTCATGCAACGAT 57.737 39.130 0.00 0.00 0.00 3.73
2559 2621 4.712122 TCTATGTAGTGTCATGCAACGA 57.288 40.909 0.00 0.00 0.00 3.85
2560 2622 4.805719 ACATCTATGTAGTGTCATGCAACG 59.194 41.667 0.00 0.00 39.68 4.10
2561 2623 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
2562 2624 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
2563 2625 5.129320 AGGAACATCTATGTAGTGTCATGCA 59.871 40.000 0.00 0.00 40.80 3.96
2564 2626 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
2565 2627 8.031864 GGATAGGAACATCTATGTAGTGTCATG 58.968 40.741 0.00 0.00 40.80 3.07
2566 2628 7.730332 TGGATAGGAACATCTATGTAGTGTCAT 59.270 37.037 0.00 0.00 40.80 3.06
2567 2629 7.014326 GTGGATAGGAACATCTATGTAGTGTCA 59.986 40.741 0.00 0.00 40.80 3.58
2568 2630 7.231722 AGTGGATAGGAACATCTATGTAGTGTC 59.768 40.741 0.00 0.00 40.80 3.67
2569 2631 7.069986 AGTGGATAGGAACATCTATGTAGTGT 58.930 38.462 0.00 0.00 40.80 3.55
2570 2632 7.531857 AGTGGATAGGAACATCTATGTAGTG 57.468 40.000 0.00 0.00 40.80 2.74
2571 2633 9.249053 CATAGTGGATAGGAACATCTATGTAGT 57.751 37.037 0.00 0.00 40.80 2.73
2572 2634 9.467796 TCATAGTGGATAGGAACATCTATGTAG 57.532 37.037 0.00 0.00 40.80 2.74
2573 2635 9.822727 TTCATAGTGGATAGGAACATCTATGTA 57.177 33.333 0.00 0.00 40.80 2.29
2574 2636 8.727100 TTCATAGTGGATAGGAACATCTATGT 57.273 34.615 0.00 0.00 44.20 2.29
2575 2637 8.256605 CCTTCATAGTGGATAGGAACATCTATG 58.743 40.741 0.00 0.00 36.42 2.23
2576 2638 7.958583 ACCTTCATAGTGGATAGGAACATCTAT 59.041 37.037 0.00 0.00 31.23 1.98
2577 2639 7.306013 ACCTTCATAGTGGATAGGAACATCTA 58.694 38.462 0.00 0.00 31.23 1.98
2578 2640 6.146760 ACCTTCATAGTGGATAGGAACATCT 58.853 40.000 0.00 0.00 31.23 2.90
2579 2641 6.426646 ACCTTCATAGTGGATAGGAACATC 57.573 41.667 0.00 0.00 31.23 3.06
2580 2642 7.076446 ACTACCTTCATAGTGGATAGGAACAT 58.924 38.462 0.00 0.00 34.02 2.71
2581 2643 6.441222 ACTACCTTCATAGTGGATAGGAACA 58.559 40.000 0.00 0.00 34.02 3.18
2582 2644 6.980416 ACTACCTTCATAGTGGATAGGAAC 57.020 41.667 0.00 0.00 34.02 3.62
2583 2645 8.063153 TGTTACTACCTTCATAGTGGATAGGAA 58.937 37.037 0.00 0.00 36.09 3.36
2584 2646 7.589081 TGTTACTACCTTCATAGTGGATAGGA 58.411 38.462 0.00 0.00 36.09 2.94
2585 2647 7.834881 TGTTACTACCTTCATAGTGGATAGG 57.165 40.000 0.00 0.00 36.09 2.57
2588 2650 9.080097 GACTATGTTACTACCTTCATAGTGGAT 57.920 37.037 17.43 0.00 46.89 3.41
2589 2651 8.280084 AGACTATGTTACTACCTTCATAGTGGA 58.720 37.037 17.43 0.00 46.89 4.02
2590 2652 8.466617 AGACTATGTTACTACCTTCATAGTGG 57.533 38.462 17.43 0.00 46.89 4.00
2593 2655 9.233649 CCCTAGACTATGTTACTACCTTCATAG 57.766 40.741 8.77 8.77 42.80 2.23
2594 2656 8.952602 TCCCTAGACTATGTTACTACCTTCATA 58.047 37.037 0.00 0.00 0.00 2.15
2595 2657 7.823635 TCCCTAGACTATGTTACTACCTTCAT 58.176 38.462 0.00 0.00 0.00 2.57
2596 2658 7.217028 TCCCTAGACTATGTTACTACCTTCA 57.783 40.000 0.00 0.00 0.00 3.02
2597 2659 8.530804 TTTCCCTAGACTATGTTACTACCTTC 57.469 38.462 0.00 0.00 0.00 3.46
2598 2660 8.925338 CATTTCCCTAGACTATGTTACTACCTT 58.075 37.037 0.00 0.00 0.00 3.50
2599 2661 8.066247 ACATTTCCCTAGACTATGTTACTACCT 58.934 37.037 0.00 0.00 28.04 3.08
2600 2662 8.142551 CACATTTCCCTAGACTATGTTACTACC 58.857 40.741 0.00 0.00 29.39 3.18
2601 2663 8.693625 ACACATTTCCCTAGACTATGTTACTAC 58.306 37.037 0.00 0.00 29.39 2.73
2602 2664 8.834004 ACACATTTCCCTAGACTATGTTACTA 57.166 34.615 0.00 0.00 29.39 1.82
2603 2665 7.735326 ACACATTTCCCTAGACTATGTTACT 57.265 36.000 0.00 0.00 29.39 2.24
2604 2666 9.530633 CTTACACATTTCCCTAGACTATGTTAC 57.469 37.037 0.00 0.00 29.39 2.50
2605 2667 9.263446 ACTTACACATTTCCCTAGACTATGTTA 57.737 33.333 0.00 0.00 29.39 2.41
2606 2668 8.147244 ACTTACACATTTCCCTAGACTATGTT 57.853 34.615 0.00 0.00 29.39 2.71
2607 2669 7.735326 ACTTACACATTTCCCTAGACTATGT 57.265 36.000 0.00 0.00 31.07 2.29
2608 2670 9.530633 GTAACTTACACATTTCCCTAGACTATG 57.469 37.037 0.00 0.00 0.00 2.23
2609 2671 9.490083 AGTAACTTACACATTTCCCTAGACTAT 57.510 33.333 1.79 0.00 0.00 2.12
2610 2672 8.890410 AGTAACTTACACATTTCCCTAGACTA 57.110 34.615 1.79 0.00 0.00 2.59
2611 2673 7.793948 AGTAACTTACACATTTCCCTAGACT 57.206 36.000 1.79 0.00 0.00 3.24
2612 2674 7.705752 GCTAGTAACTTACACATTTCCCTAGAC 59.294 40.741 1.79 0.00 0.00 2.59
2613 2675 7.618512 AGCTAGTAACTTACACATTTCCCTAGA 59.381 37.037 1.79 0.00 0.00 2.43
2614 2676 7.783042 AGCTAGTAACTTACACATTTCCCTAG 58.217 38.462 1.79 0.00 0.00 3.02
2615 2677 7.729124 AGCTAGTAACTTACACATTTCCCTA 57.271 36.000 1.79 0.00 0.00 3.53
2616 2678 6.622427 AGCTAGTAACTTACACATTTCCCT 57.378 37.500 1.79 0.00 0.00 4.20
2617 2679 8.827677 CATAAGCTAGTAACTTACACATTTCCC 58.172 37.037 1.79 0.00 32.67 3.97
2618 2680 9.379791 ACATAAGCTAGTAACTTACACATTTCC 57.620 33.333 1.79 0.00 32.67 3.13
2626 2688 9.526713 GGGTAAGAACATAAGCTAGTAACTTAC 57.473 37.037 20.14 20.14 37.21 2.34
2627 2689 9.258629 TGGGTAAGAACATAAGCTAGTAACTTA 57.741 33.333 0.00 0.00 34.29 2.24
2628 2690 8.142485 TGGGTAAGAACATAAGCTAGTAACTT 57.858 34.615 0.00 0.00 0.00 2.66
2629 2691 7.729124 TGGGTAAGAACATAAGCTAGTAACT 57.271 36.000 0.00 0.00 0.00 2.24
2630 2692 8.827677 CAATGGGTAAGAACATAAGCTAGTAAC 58.172 37.037 0.00 0.00 0.00 2.50
2631 2693 8.545472 ACAATGGGTAAGAACATAAGCTAGTAA 58.455 33.333 0.00 0.00 0.00 2.24
2632 2694 7.985184 CACAATGGGTAAGAACATAAGCTAGTA 59.015 37.037 0.00 0.00 0.00 1.82
2633 2695 6.823689 CACAATGGGTAAGAACATAAGCTAGT 59.176 38.462 0.00 0.00 0.00 2.57
2634 2696 7.011482 GTCACAATGGGTAAGAACATAAGCTAG 59.989 40.741 0.00 0.00 0.00 3.42
2635 2697 6.821665 GTCACAATGGGTAAGAACATAAGCTA 59.178 38.462 0.00 0.00 0.00 3.32
2636 2698 5.648092 GTCACAATGGGTAAGAACATAAGCT 59.352 40.000 0.00 0.00 0.00 3.74
2637 2699 5.163652 GGTCACAATGGGTAAGAACATAAGC 60.164 44.000 0.00 0.00 0.00 3.09
2638 2700 5.943416 TGGTCACAATGGGTAAGAACATAAG 59.057 40.000 0.00 0.00 0.00 1.73
2639 2701 5.882040 TGGTCACAATGGGTAAGAACATAA 58.118 37.500 0.00 0.00 0.00 1.90
2640 2702 5.496556 CTGGTCACAATGGGTAAGAACATA 58.503 41.667 0.00 0.00 0.00 2.29
2641 2703 4.335416 CTGGTCACAATGGGTAAGAACAT 58.665 43.478 0.00 0.00 0.00 2.71
2642 2704 3.750371 CTGGTCACAATGGGTAAGAACA 58.250 45.455 0.00 0.00 0.00 3.18
2643 2705 2.488153 GCTGGTCACAATGGGTAAGAAC 59.512 50.000 0.00 0.00 0.00 3.01
2644 2706 2.554344 GGCTGGTCACAATGGGTAAGAA 60.554 50.000 0.00 0.00 0.00 2.52
2645 2707 1.004277 GGCTGGTCACAATGGGTAAGA 59.996 52.381 0.00 0.00 0.00 2.10
2646 2708 1.004745 AGGCTGGTCACAATGGGTAAG 59.995 52.381 0.00 0.00 0.00 2.34
2647 2709 1.072266 AGGCTGGTCACAATGGGTAA 58.928 50.000 0.00 0.00 0.00 2.85
2648 2710 1.072266 AAGGCTGGTCACAATGGGTA 58.928 50.000 0.00 0.00 0.00 3.69
2649 2711 1.072266 TAAGGCTGGTCACAATGGGT 58.928 50.000 0.00 0.00 0.00 4.51
2650 2712 1.271871 TGTAAGGCTGGTCACAATGGG 60.272 52.381 0.00 0.00 0.00 4.00
2651 2713 2.086869 CTGTAAGGCTGGTCACAATGG 58.913 52.381 0.00 0.00 0.00 3.16
2652 2714 3.005554 CTCTGTAAGGCTGGTCACAATG 58.994 50.000 0.00 0.00 0.00 2.82
2653 2715 2.906389 TCTCTGTAAGGCTGGTCACAAT 59.094 45.455 0.00 0.00 0.00 2.71
2654 2716 2.325484 TCTCTGTAAGGCTGGTCACAA 58.675 47.619 0.00 0.00 0.00 3.33
2655 2717 2.009681 TCTCTGTAAGGCTGGTCACA 57.990 50.000 0.00 0.00 0.00 3.58
2656 2718 2.563179 TCTTCTCTGTAAGGCTGGTCAC 59.437 50.000 0.00 0.00 0.00 3.67
2657 2719 2.889512 TCTTCTCTGTAAGGCTGGTCA 58.110 47.619 0.00 0.00 0.00 4.02
2658 2720 3.963428 TTCTTCTCTGTAAGGCTGGTC 57.037 47.619 0.00 0.00 0.00 4.02
2659 2721 3.620966 GCATTCTTCTCTGTAAGGCTGGT 60.621 47.826 0.00 0.00 0.00 4.00
2660 2722 2.941720 GCATTCTTCTCTGTAAGGCTGG 59.058 50.000 0.00 0.00 0.00 4.85
2661 2723 3.870419 GAGCATTCTTCTCTGTAAGGCTG 59.130 47.826 0.00 0.00 0.00 4.85
2662 2724 3.517100 TGAGCATTCTTCTCTGTAAGGCT 59.483 43.478 0.00 0.00 0.00 4.58
2668 2730 4.276926 GGTTGTTTGAGCATTCTTCTCTGT 59.723 41.667 0.00 0.00 0.00 3.41
2689 2751 0.616891 AAAGGGACGAAATAGGCGGT 59.383 50.000 0.00 0.00 0.00 5.68
2702 2766 3.374042 TGTTGGAACTTGTGAAAGGGA 57.626 42.857 0.00 0.00 0.00 4.20
2708 2772 4.023279 GCACATACATGTTGGAACTTGTGA 60.023 41.667 17.05 6.02 44.09 3.58
2716 2780 7.282901 GCCATATATATGCACATACATGTTGGA 59.717 37.037 16.08 0.00 39.39 3.53
2725 2789 4.163268 ACCACCGCCATATATATGCACATA 59.837 41.667 16.08 0.00 32.40 2.29
2731 2795 3.561310 GCATCACCACCGCCATATATATG 59.439 47.826 14.78 14.78 0.00 1.78
2732 2796 3.741075 CGCATCACCACCGCCATATATAT 60.741 47.826 0.00 0.00 0.00 0.86
2733 2797 2.418060 CGCATCACCACCGCCATATATA 60.418 50.000 0.00 0.00 0.00 0.86
2734 2798 1.675714 CGCATCACCACCGCCATATAT 60.676 52.381 0.00 0.00 0.00 0.86
2799 2881 6.098017 GCCAAAAATGAATTCTCTCTTGGAG 58.902 40.000 22.94 7.75 43.12 3.86
2800 2882 5.047092 GGCCAAAAATGAATTCTCTCTTGGA 60.047 40.000 22.94 0.00 35.18 3.53
2801 2883 5.046807 AGGCCAAAAATGAATTCTCTCTTGG 60.047 40.000 5.01 18.09 36.08 3.61
2802 2884 6.034161 AGGCCAAAAATGAATTCTCTCTTG 57.966 37.500 5.01 5.65 0.00 3.02
2803 2885 6.295518 GGAAGGCCAAAAATGAATTCTCTCTT 60.296 38.462 5.01 0.00 0.00 2.85
2804 2886 5.186603 GGAAGGCCAAAAATGAATTCTCTCT 59.813 40.000 5.01 0.00 0.00 3.10
2805 2887 5.186603 AGGAAGGCCAAAAATGAATTCTCTC 59.813 40.000 5.01 0.00 36.29 3.20
2806 2888 5.089434 AGGAAGGCCAAAAATGAATTCTCT 58.911 37.500 5.01 0.00 36.29 3.10
2807 2889 5.411831 AGGAAGGCCAAAAATGAATTCTC 57.588 39.130 5.01 0.00 36.29 2.87
2808 2890 5.830799 AAGGAAGGCCAAAAATGAATTCT 57.169 34.783 5.01 0.00 36.29 2.40
2809 2891 7.977789 TTTAAGGAAGGCCAAAAATGAATTC 57.022 32.000 5.01 0.00 36.29 2.17
2810 2892 8.938801 AATTTAAGGAAGGCCAAAAATGAATT 57.061 26.923 5.01 1.06 33.58 2.17
2811 2893 8.938801 AAATTTAAGGAAGGCCAAAAATGAAT 57.061 26.923 5.01 0.00 33.58 2.57
2812 2894 8.759481 AAAATTTAAGGAAGGCCAAAAATGAA 57.241 26.923 5.01 0.00 33.58 2.57
2813 2895 8.628280 CAAAAATTTAAGGAAGGCCAAAAATGA 58.372 29.630 5.01 0.00 33.58 2.57
2814 2896 8.412456 ACAAAAATTTAAGGAAGGCCAAAAATG 58.588 29.630 5.01 0.00 33.58 2.32
2815 2897 8.532186 ACAAAAATTTAAGGAAGGCCAAAAAT 57.468 26.923 5.01 0.00 34.26 1.82
2816 2898 7.946381 ACAAAAATTTAAGGAAGGCCAAAAA 57.054 28.000 5.01 0.00 36.29 1.94
2817 2899 7.946381 AACAAAAATTTAAGGAAGGCCAAAA 57.054 28.000 5.01 0.00 36.29 2.44
2818 2900 7.067615 GGAAACAAAAATTTAAGGAAGGCCAAA 59.932 33.333 5.01 0.00 36.29 3.28
2819 2901 6.544197 GGAAACAAAAATTTAAGGAAGGCCAA 59.456 34.615 5.01 0.00 36.29 4.52
2820 2902 6.058833 GGAAACAAAAATTTAAGGAAGGCCA 58.941 36.000 5.01 0.00 36.29 5.36
2821 2903 6.296026 AGGAAACAAAAATTTAAGGAAGGCC 58.704 36.000 0.00 0.00 0.00 5.19
2822 2904 7.217200 AGAGGAAACAAAAATTTAAGGAAGGC 58.783 34.615 0.00 0.00 0.00 4.35
2823 2905 9.613428 AAAGAGGAAACAAAAATTTAAGGAAGG 57.387 29.630 0.00 0.00 0.00 3.46
2825 2907 9.389755 CCAAAGAGGAAACAAAAATTTAAGGAA 57.610 29.630 0.00 0.00 41.22 3.36
2826 2908 8.544622 ACCAAAGAGGAAACAAAAATTTAAGGA 58.455 29.630 0.00 0.00 41.22 3.36
2827 2909 8.731275 ACCAAAGAGGAAACAAAAATTTAAGG 57.269 30.769 0.00 0.00 41.22 2.69
2829 2911 9.952030 AGAACCAAAGAGGAAACAAAAATTTAA 57.048 25.926 0.00 0.00 41.22 1.52
2831 2913 9.599866 CTAGAACCAAAGAGGAAACAAAAATTT 57.400 29.630 0.00 0.00 41.22 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.