Multiple sequence alignment - TraesCS1B01G302700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G302700 chr1B 100.000 4288 0 0 1 4288 523206998 523211285 0.000000e+00 7919.0
1 TraesCS1B01G302700 chr1B 94.750 3124 97 26 294 3400 523337594 523340667 0.000000e+00 4798.0
2 TraesCS1B01G302700 chr1B 84.650 443 51 11 2703 3142 523339558 523339986 3.960000e-115 425.0
3 TraesCS1B01G302700 chr1B 92.500 280 16 3 1 280 229674336 229674062 3.110000e-106 396.0
4 TraesCS1B01G302700 chr1B 84.334 383 52 5 2326 2705 523340033 523340410 6.770000e-98 368.0
5 TraesCS1B01G302700 chr1B 83.756 394 47 10 2752 3142 523209323 523209702 1.470000e-94 357.0
6 TraesCS1B01G302700 chr1B 83.756 394 47 10 2326 2705 523209749 523210139 1.470000e-94 357.0
7 TraesCS1B01G302700 chr1B 73.731 906 141 55 1010 1896 522739687 522740514 9.140000e-67 265.0
8 TraesCS1B01G302700 chr1B 76.525 541 90 20 1379 1911 522840638 522840127 1.180000e-65 261.0
9 TraesCS1B01G302700 chr1B 73.250 957 147 64 877 1797 522362738 522363621 9.210000e-62 248.0
10 TraesCS1B01G302700 chr1B 79.822 337 30 24 828 1137 522841178 522840853 1.210000e-50 211.0
11 TraesCS1B01G302700 chr1B 88.636 88 9 1 3871 3958 179866682 179866768 5.860000e-19 106.0
12 TraesCS1B01G302700 chr1D 94.002 1884 72 13 853 2705 390581386 390579513 0.000000e+00 2815.0
13 TraesCS1B01G302700 chr1D 90.036 1967 119 25 775 2703 390409777 390407850 0.000000e+00 2475.0
14 TraesCS1B01G302700 chr1D 90.678 944 43 9 1789 2705 390727893 390728818 0.000000e+00 1214.0
15 TraesCS1B01G302700 chr1D 92.598 716 40 5 2703 3417 390408277 390407574 0.000000e+00 1016.0
16 TraesCS1B01G302700 chr1D 92.952 454 31 1 3422 3874 390406422 390405969 0.000000e+00 660.0
17 TraesCS1B01G302700 chr1D 89.318 440 44 3 329 767 389265105 389264668 2.250000e-152 549.0
18 TraesCS1B01G302700 chr1D 82.794 587 67 19 2703 3283 390579938 390579380 1.070000e-135 494.0
19 TraesCS1B01G302700 chr1D 82.056 574 68 15 2713 3284 390728413 390728953 1.410000e-124 457.0
20 TraesCS1B01G302700 chr1D 87.906 339 35 6 3956 4288 390405972 390405634 1.120000e-105 394.0
21 TraesCS1B01G302700 chr1D 73.535 1092 157 72 852 1896 389243665 389244671 1.170000e-75 294.0
22 TraesCS1B01G302700 chr1D 77.099 524 82 25 1393 1908 389262880 389262387 7.070000e-68 268.0
23 TraesCS1B01G302700 chr1D 86.996 223 25 4 407 628 390424324 390424105 9.210000e-62 248.0
24 TraesCS1B01G302700 chr1D 77.156 429 68 18 1369 1797 388991457 388991855 5.580000e-54 222.0
25 TraesCS1B01G302700 chr1D 77.209 430 66 22 1369 1797 389213421 389213819 5.580000e-54 222.0
26 TraesCS1B01G302700 chr1D 74.303 502 58 40 852 1310 389525532 389525059 3.460000e-31 147.0
27 TraesCS1B01G302700 chr1A 93.096 1463 56 18 850 2284 488235650 488237095 0.000000e+00 2100.0
28 TraesCS1B01G302700 chr1A 95.000 380 16 3 2326 2705 488237187 488237563 1.030000e-165 593.0
29 TraesCS1B01G302700 chr1A 95.238 336 13 3 3956 4288 488238687 488239022 2.940000e-146 529.0
30 TraesCS1B01G302700 chr1A 94.512 328 14 1 3302 3625 488238157 488238484 1.780000e-138 503.0
31 TraesCS1B01G302700 chr1A 82.578 574 68 20 2713 3283 488237150 488237694 1.080000e-130 477.0
32 TraesCS1B01G302700 chr1A 98.095 210 3 1 3666 3874 488238481 488238690 8.760000e-97 364.0
33 TraesCS1B01G302700 chr1A 78.089 429 64 16 1369 1797 488071876 488072274 1.190000e-60 244.0
34 TraesCS1B01G302700 chr1A 78.824 340 41 21 3955 4288 488239809 488240123 2.610000e-47 200.0
35 TraesCS1B01G302700 chr1A 91.919 99 8 0 3727 3825 488239683 488239781 5.780000e-29 139.0
36 TraesCS1B01G302700 chr5B 96.371 248 8 1 1 248 239807686 239807932 1.440000e-109 407.0
37 TraesCS1B01G302700 chr5B 92.115 279 15 2 1 279 672964871 672964600 1.870000e-103 387.0
38 TraesCS1B01G302700 chr5B 84.507 284 31 7 1 280 674861511 674861785 7.070000e-68 268.0
39 TraesCS1B01G302700 chr5B 94.444 36 0 2 634 667 94124716 94124751 2.000000e-03 54.7
40 TraesCS1B01G302700 chr2B 96.371 248 8 1 1 248 197608322 197608076 1.440000e-109 407.0
41 TraesCS1B01G302700 chr2B 92.419 277 14 2 3 279 306781315 306781584 5.200000e-104 388.0
42 TraesCS1B01G302700 chr2B 95.473 243 10 1 1 242 194959104 194958862 1.870000e-103 387.0
43 TraesCS1B01G302700 chr7B 92.857 280 10 3 1 280 688624347 688624078 8.640000e-107 398.0
44 TraesCS1B01G302700 chr6B 92.446 278 14 2 1 278 368324412 368324682 1.450000e-104 390.0
45 TraesCS1B01G302700 chr6B 84.043 282 33 8 2 279 458847915 458848188 1.180000e-65 261.0
46 TraesCS1B01G302700 chr6B 89.773 88 8 1 3871 3958 93453031 93453117 1.260000e-20 111.0
47 TraesCS1B01G302700 chr6B 87.097 93 8 4 3873 3963 433707512 433707422 7.590000e-18 102.0
48 TraesCS1B01G302700 chr4B 92.143 280 16 3 1 280 273092414 273092687 1.450000e-104 390.0
49 TraesCS1B01G302700 chr7D 86.833 281 27 5 1 279 429606226 429605954 5.390000e-79 305.0
50 TraesCS1B01G302700 chr3D 90.217 92 7 2 3873 3963 417424084 417423994 7.530000e-23 119.0
51 TraesCS1B01G302700 chr2D 90.698 86 6 2 3873 3957 72781335 72781251 3.500000e-21 113.0
52 TraesCS1B01G302700 chr3B 88.542 96 5 5 3869 3961 654652795 654652703 1.260000e-20 111.0
53 TraesCS1B01G302700 chr3B 86.139 101 9 5 3863 3959 738379791 738379692 2.110000e-18 104.0
54 TraesCS1B01G302700 chr6D 85.714 98 9 4 3869 3963 48464591 48464496 9.810000e-17 99.0
55 TraesCS1B01G302700 chr6D 88.608 79 7 2 3881 3958 81591961 81592038 1.270000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G302700 chr1B 523206998 523211285 4287 False 2877.666667 7919 89.170667 1 4288 3 chr1B.!!$F4 4287
1 TraesCS1B01G302700 chr1B 523337594 523340667 3073 False 1863.666667 4798 87.911333 294 3400 3 chr1B.!!$F5 3106
2 TraesCS1B01G302700 chr1B 522739687 522740514 827 False 265.000000 265 73.731000 1010 1896 1 chr1B.!!$F3 886
3 TraesCS1B01G302700 chr1B 522362738 522363621 883 False 248.000000 248 73.250000 877 1797 1 chr1B.!!$F2 920
4 TraesCS1B01G302700 chr1B 522840127 522841178 1051 True 236.000000 261 78.173500 828 1911 2 chr1B.!!$R2 1083
5 TraesCS1B01G302700 chr1D 390579380 390581386 2006 True 1654.500000 2815 88.398000 853 3283 2 chr1D.!!$R5 2430
6 TraesCS1B01G302700 chr1D 390405634 390409777 4143 True 1136.250000 2475 90.873000 775 4288 4 chr1D.!!$R4 3513
7 TraesCS1B01G302700 chr1D 390727893 390728953 1060 False 835.500000 1214 86.367000 1789 3284 2 chr1D.!!$F4 1495
8 TraesCS1B01G302700 chr1D 389262387 389265105 2718 True 408.500000 549 83.208500 329 1908 2 chr1D.!!$R3 1579
9 TraesCS1B01G302700 chr1D 389243665 389244671 1006 False 294.000000 294 73.535000 852 1896 1 chr1D.!!$F3 1044
10 TraesCS1B01G302700 chr1A 488235650 488240123 4473 False 613.125000 2100 91.157750 850 4288 8 chr1A.!!$F2 3438

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
352 353 0.179062 CACTAGCTCTCCCATGCACC 60.179 60.000 0.00 0.0 0.00 5.01 F
487 490 0.935898 CATCGTCTGATTGAGCCTGC 59.064 55.000 0.00 0.0 30.49 4.85 F
542 551 1.403249 GGATTGCAGCCACAACATCAC 60.403 52.381 3.04 0.0 31.03 3.06 F
2139 3457 1.386550 GGGAAAAGCTTAGGGGGCA 59.613 57.895 0.00 0.0 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1527 2841 1.584380 GAGCGACCACGTACCTGTCT 61.584 60.00 0.00 0.0 41.98 3.41 R
2139 3457 2.432510 CGGCTCTTTCTGGAAGATACCT 59.567 50.00 13.25 0.0 46.36 3.08 R
2747 4118 4.362279 TGCACAAGAGATTTCAAAGCAAC 58.638 39.13 0.00 0.0 0.00 4.17 R
3479 6449 0.112218 TATGCACCAACCAGGCAAGT 59.888 50.00 0.00 0.0 43.14 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.708726 ATTGCTATGCCTGTTTGACTTC 57.291 40.909 0.00 0.00 0.00 3.01
22 23 3.138884 TGCTATGCCTGTTTGACTTCA 57.861 42.857 0.00 0.00 0.00 3.02
23 24 2.813754 TGCTATGCCTGTTTGACTTCAC 59.186 45.455 0.00 0.00 0.00 3.18
24 25 3.077359 GCTATGCCTGTTTGACTTCACT 58.923 45.455 0.00 0.00 0.00 3.41
25 26 3.120060 GCTATGCCTGTTTGACTTCACTG 60.120 47.826 0.00 0.00 0.00 3.66
26 27 2.418368 TGCCTGTTTGACTTCACTGT 57.582 45.000 0.00 0.00 0.00 3.55
27 28 2.016318 TGCCTGTTTGACTTCACTGTG 58.984 47.619 0.17 0.17 0.00 3.66
28 29 2.017049 GCCTGTTTGACTTCACTGTGT 58.983 47.619 7.79 0.00 0.00 3.72
29 30 2.223340 GCCTGTTTGACTTCACTGTGTG 60.223 50.000 7.79 5.00 34.45 3.82
30 31 3.270027 CCTGTTTGACTTCACTGTGTGA 58.730 45.455 7.79 0.00 41.09 3.58
31 32 3.063997 CCTGTTTGACTTCACTGTGTGAC 59.936 47.826 7.79 3.84 42.60 3.67
32 33 3.935203 CTGTTTGACTTCACTGTGTGACT 59.065 43.478 7.79 0.00 42.60 3.41
33 34 5.079689 TGTTTGACTTCACTGTGTGACTA 57.920 39.130 7.79 0.00 42.60 2.59
34 35 4.868171 TGTTTGACTTCACTGTGTGACTAC 59.132 41.667 7.79 6.39 42.60 2.73
35 36 5.109903 GTTTGACTTCACTGTGTGACTACT 58.890 41.667 7.79 0.00 42.60 2.57
36 37 5.339008 TTGACTTCACTGTGTGACTACTT 57.661 39.130 7.79 0.00 42.60 2.24
37 38 4.682787 TGACTTCACTGTGTGACTACTTG 58.317 43.478 7.79 0.00 42.60 3.16
38 39 4.159693 TGACTTCACTGTGTGACTACTTGT 59.840 41.667 7.79 0.00 42.60 3.16
39 40 5.086104 ACTTCACTGTGTGACTACTTGTT 57.914 39.130 7.79 0.00 42.60 2.83
40 41 5.109903 ACTTCACTGTGTGACTACTTGTTC 58.890 41.667 7.79 0.00 42.60 3.18
41 42 5.105310 ACTTCACTGTGTGACTACTTGTTCT 60.105 40.000 7.79 0.00 42.60 3.01
42 43 4.682787 TCACTGTGTGACTACTTGTTCTG 58.317 43.478 7.79 0.00 37.67 3.02
43 44 4.401202 TCACTGTGTGACTACTTGTTCTGA 59.599 41.667 7.79 0.00 37.67 3.27
44 45 5.069119 TCACTGTGTGACTACTTGTTCTGAT 59.931 40.000 7.79 0.00 37.67 2.90
45 46 5.755375 CACTGTGTGACTACTTGTTCTGATT 59.245 40.000 0.00 0.00 35.23 2.57
46 47 5.755375 ACTGTGTGACTACTTGTTCTGATTG 59.245 40.000 0.00 0.00 0.00 2.67
47 48 5.056480 TGTGTGACTACTTGTTCTGATTGG 58.944 41.667 0.00 0.00 0.00 3.16
48 49 4.065088 TGTGACTACTTGTTCTGATTGGC 58.935 43.478 0.00 0.00 0.00 4.52
49 50 4.202357 TGTGACTACTTGTTCTGATTGGCT 60.202 41.667 0.00 0.00 0.00 4.75
50 51 4.757149 GTGACTACTTGTTCTGATTGGCTT 59.243 41.667 0.00 0.00 0.00 4.35
51 52 4.997395 TGACTACTTGTTCTGATTGGCTTC 59.003 41.667 0.00 0.00 0.00 3.86
52 53 3.997021 ACTACTTGTTCTGATTGGCTTCG 59.003 43.478 0.00 0.00 0.00 3.79
53 54 2.851195 ACTTGTTCTGATTGGCTTCGT 58.149 42.857 0.00 0.00 0.00 3.85
54 55 4.002906 ACTTGTTCTGATTGGCTTCGTA 57.997 40.909 0.00 0.00 0.00 3.43
55 56 3.746492 ACTTGTTCTGATTGGCTTCGTAC 59.254 43.478 0.00 0.00 0.00 3.67
56 57 3.678056 TGTTCTGATTGGCTTCGTACT 57.322 42.857 0.00 0.00 0.00 2.73
57 58 4.794278 TGTTCTGATTGGCTTCGTACTA 57.206 40.909 0.00 0.00 0.00 1.82
58 59 5.339008 TGTTCTGATTGGCTTCGTACTAT 57.661 39.130 0.00 0.00 0.00 2.12
59 60 5.348986 TGTTCTGATTGGCTTCGTACTATC 58.651 41.667 0.00 0.00 0.00 2.08
60 61 5.127194 TGTTCTGATTGGCTTCGTACTATCT 59.873 40.000 0.00 0.00 0.00 1.98
61 62 5.854010 TCTGATTGGCTTCGTACTATCTT 57.146 39.130 0.00 0.00 0.00 2.40
62 63 5.833082 TCTGATTGGCTTCGTACTATCTTC 58.167 41.667 0.00 0.00 0.00 2.87
63 64 4.945246 TGATTGGCTTCGTACTATCTTCC 58.055 43.478 0.00 0.00 0.00 3.46
64 65 4.404394 TGATTGGCTTCGTACTATCTTCCA 59.596 41.667 0.00 0.00 0.00 3.53
65 66 5.070446 TGATTGGCTTCGTACTATCTTCCAT 59.930 40.000 0.00 0.00 0.00 3.41
66 67 4.585955 TGGCTTCGTACTATCTTCCATC 57.414 45.455 0.00 0.00 0.00 3.51
67 68 3.321111 TGGCTTCGTACTATCTTCCATCC 59.679 47.826 0.00 0.00 0.00 3.51
68 69 3.306156 GGCTTCGTACTATCTTCCATCCC 60.306 52.174 0.00 0.00 0.00 3.85
69 70 3.612004 GCTTCGTACTATCTTCCATCCCG 60.612 52.174 0.00 0.00 0.00 5.14
70 71 3.497103 TCGTACTATCTTCCATCCCGA 57.503 47.619 0.00 0.00 0.00 5.14
71 72 4.030314 TCGTACTATCTTCCATCCCGAT 57.970 45.455 0.00 0.00 0.00 4.18
72 73 4.008330 TCGTACTATCTTCCATCCCGATC 58.992 47.826 0.00 0.00 0.00 3.69
73 74 3.128938 CGTACTATCTTCCATCCCGATCC 59.871 52.174 0.00 0.00 0.00 3.36
74 75 3.551635 ACTATCTTCCATCCCGATCCT 57.448 47.619 0.00 0.00 0.00 3.24
75 76 4.676799 ACTATCTTCCATCCCGATCCTA 57.323 45.455 0.00 0.00 0.00 2.94
76 77 4.345854 ACTATCTTCCATCCCGATCCTAC 58.654 47.826 0.00 0.00 0.00 3.18
77 78 3.551635 ATCTTCCATCCCGATCCTACT 57.448 47.619 0.00 0.00 0.00 2.57
78 79 4.676799 ATCTTCCATCCCGATCCTACTA 57.323 45.455 0.00 0.00 0.00 1.82
79 80 3.764218 TCTTCCATCCCGATCCTACTAC 58.236 50.000 0.00 0.00 0.00 2.73
80 81 2.599408 TCCATCCCGATCCTACTACC 57.401 55.000 0.00 0.00 0.00 3.18
81 82 2.071372 TCCATCCCGATCCTACTACCT 58.929 52.381 0.00 0.00 0.00 3.08
82 83 3.262842 TCCATCCCGATCCTACTACCTA 58.737 50.000 0.00 0.00 0.00 3.08
83 84 3.266254 TCCATCCCGATCCTACTACCTAG 59.734 52.174 0.00 0.00 0.00 3.02
84 85 2.875094 TCCCGATCCTACTACCTAGC 57.125 55.000 0.00 0.00 0.00 3.42
85 86 2.346529 TCCCGATCCTACTACCTAGCT 58.653 52.381 0.00 0.00 0.00 3.32
86 87 2.040012 TCCCGATCCTACTACCTAGCTG 59.960 54.545 0.00 0.00 0.00 4.24
87 88 1.813786 CCGATCCTACTACCTAGCTGC 59.186 57.143 0.00 0.00 0.00 5.25
88 89 2.553466 CCGATCCTACTACCTAGCTGCT 60.553 54.545 7.57 7.57 0.00 4.24
89 90 3.307550 CCGATCCTACTACCTAGCTGCTA 60.308 52.174 9.34 9.34 0.00 3.49
90 91 4.519213 CGATCCTACTACCTAGCTGCTAT 58.481 47.826 10.23 0.00 0.00 2.97
91 92 4.573201 CGATCCTACTACCTAGCTGCTATC 59.427 50.000 10.23 0.97 0.00 2.08
92 93 4.995624 TCCTACTACCTAGCTGCTATCA 57.004 45.455 10.23 0.00 0.00 2.15
93 94 4.912586 TCCTACTACCTAGCTGCTATCAG 58.087 47.826 10.23 9.76 43.16 2.90
94 95 4.351407 TCCTACTACCTAGCTGCTATCAGT 59.649 45.833 10.23 14.52 42.29 3.41
95 96 4.698304 CCTACTACCTAGCTGCTATCAGTC 59.302 50.000 10.23 0.00 42.29 3.51
96 97 4.171878 ACTACCTAGCTGCTATCAGTCA 57.828 45.455 10.23 0.00 42.29 3.41
97 98 4.735369 ACTACCTAGCTGCTATCAGTCAT 58.265 43.478 10.23 0.00 42.29 3.06
98 99 4.764823 ACTACCTAGCTGCTATCAGTCATC 59.235 45.833 10.23 0.00 42.29 2.92
99 100 3.570540 ACCTAGCTGCTATCAGTCATCA 58.429 45.455 10.23 0.00 42.29 3.07
100 101 4.158786 ACCTAGCTGCTATCAGTCATCAT 58.841 43.478 10.23 0.00 42.29 2.45
101 102 4.021280 ACCTAGCTGCTATCAGTCATCATG 60.021 45.833 10.23 0.00 42.29 3.07
102 103 2.768698 AGCTGCTATCAGTCATCATGC 58.231 47.619 0.00 0.00 42.29 4.06
103 104 2.369203 AGCTGCTATCAGTCATCATGCT 59.631 45.455 0.00 0.00 42.29 3.79
104 105 3.139850 GCTGCTATCAGTCATCATGCTT 58.860 45.455 0.00 0.00 42.29 3.91
105 106 3.564644 GCTGCTATCAGTCATCATGCTTT 59.435 43.478 0.00 0.00 42.29 3.51
106 107 4.554919 GCTGCTATCAGTCATCATGCTTTG 60.555 45.833 0.00 0.00 42.29 2.77
107 108 3.881089 TGCTATCAGTCATCATGCTTTGG 59.119 43.478 0.00 0.00 0.00 3.28
108 109 3.881688 GCTATCAGTCATCATGCTTTGGT 59.118 43.478 0.00 0.00 0.00 3.67
109 110 4.337555 GCTATCAGTCATCATGCTTTGGTT 59.662 41.667 0.00 0.00 0.00 3.67
110 111 5.163581 GCTATCAGTCATCATGCTTTGGTTT 60.164 40.000 0.00 0.00 0.00 3.27
111 112 4.771590 TCAGTCATCATGCTTTGGTTTC 57.228 40.909 0.00 0.00 0.00 2.78
112 113 4.143543 TCAGTCATCATGCTTTGGTTTCA 58.856 39.130 0.00 0.00 0.00 2.69
113 114 4.768448 TCAGTCATCATGCTTTGGTTTCAT 59.232 37.500 0.00 0.00 0.00 2.57
114 115 5.945191 TCAGTCATCATGCTTTGGTTTCATA 59.055 36.000 0.00 0.00 0.00 2.15
115 116 6.032094 CAGTCATCATGCTTTGGTTTCATAC 58.968 40.000 0.00 0.00 0.00 2.39
116 117 5.948162 AGTCATCATGCTTTGGTTTCATACT 59.052 36.000 0.00 0.00 0.00 2.12
117 118 6.435277 AGTCATCATGCTTTGGTTTCATACTT 59.565 34.615 0.00 0.00 0.00 2.24
118 119 6.529125 GTCATCATGCTTTGGTTTCATACTTG 59.471 38.462 0.00 0.00 0.00 3.16
119 120 6.209192 TCATCATGCTTTGGTTTCATACTTGT 59.791 34.615 0.00 0.00 0.00 3.16
120 121 6.012658 TCATGCTTTGGTTTCATACTTGTC 57.987 37.500 0.00 0.00 0.00 3.18
121 122 5.769662 TCATGCTTTGGTTTCATACTTGTCT 59.230 36.000 0.00 0.00 0.00 3.41
122 123 5.437289 TGCTTTGGTTTCATACTTGTCTG 57.563 39.130 0.00 0.00 0.00 3.51
123 124 5.129634 TGCTTTGGTTTCATACTTGTCTGA 58.870 37.500 0.00 0.00 0.00 3.27
124 125 5.008613 TGCTTTGGTTTCATACTTGTCTGAC 59.991 40.000 0.00 0.00 0.00 3.51
125 126 5.239525 GCTTTGGTTTCATACTTGTCTGACT 59.760 40.000 9.51 0.00 0.00 3.41
126 127 6.426937 GCTTTGGTTTCATACTTGTCTGACTA 59.573 38.462 9.51 0.09 0.00 2.59
127 128 7.119846 GCTTTGGTTTCATACTTGTCTGACTAT 59.880 37.037 9.51 0.00 0.00 2.12
128 129 7.905604 TTGGTTTCATACTTGTCTGACTATG 57.094 36.000 9.51 8.89 0.00 2.23
129 130 6.406370 TGGTTTCATACTTGTCTGACTATGG 58.594 40.000 9.51 0.00 0.00 2.74
130 131 5.294552 GGTTTCATACTTGTCTGACTATGGC 59.705 44.000 9.51 4.14 0.00 4.40
131 132 5.939764 TTCATACTTGTCTGACTATGGCT 57.060 39.130 9.51 0.00 0.00 4.75
132 133 5.939764 TCATACTTGTCTGACTATGGCTT 57.060 39.130 9.51 0.00 0.00 4.35
133 134 5.664457 TCATACTTGTCTGACTATGGCTTG 58.336 41.667 9.51 0.00 0.00 4.01
134 135 5.187772 TCATACTTGTCTGACTATGGCTTGT 59.812 40.000 9.51 0.00 0.00 3.16
135 136 3.931578 ACTTGTCTGACTATGGCTTGTC 58.068 45.455 9.51 0.00 0.00 3.18
136 137 3.580458 ACTTGTCTGACTATGGCTTGTCT 59.420 43.478 9.51 0.00 34.57 3.41
137 138 4.772624 ACTTGTCTGACTATGGCTTGTCTA 59.227 41.667 9.51 0.00 34.57 2.59
138 139 4.991153 TGTCTGACTATGGCTTGTCTAG 57.009 45.455 9.51 0.00 34.57 2.43
139 140 4.344978 TGTCTGACTATGGCTTGTCTAGT 58.655 43.478 9.51 0.00 34.57 2.57
140 141 4.158579 TGTCTGACTATGGCTTGTCTAGTG 59.841 45.833 9.51 0.00 34.57 2.74
141 142 4.158764 GTCTGACTATGGCTTGTCTAGTGT 59.841 45.833 0.00 0.00 34.57 3.55
142 143 5.357314 GTCTGACTATGGCTTGTCTAGTGTA 59.643 44.000 0.00 0.00 34.57 2.90
143 144 5.590663 TCTGACTATGGCTTGTCTAGTGTAG 59.409 44.000 0.00 0.00 34.57 2.74
144 145 5.262009 TGACTATGGCTTGTCTAGTGTAGT 58.738 41.667 0.00 0.00 34.57 2.73
145 146 5.715279 TGACTATGGCTTGTCTAGTGTAGTT 59.285 40.000 0.00 0.00 34.57 2.24
146 147 6.127703 TGACTATGGCTTGTCTAGTGTAGTTC 60.128 42.308 0.00 0.00 34.57 3.01
147 148 5.715279 ACTATGGCTTGTCTAGTGTAGTTCA 59.285 40.000 0.00 0.00 0.00 3.18
148 149 5.683876 ATGGCTTGTCTAGTGTAGTTCAT 57.316 39.130 0.00 0.00 0.00 2.57
149 150 5.073311 TGGCTTGTCTAGTGTAGTTCATC 57.927 43.478 0.00 0.00 0.00 2.92
150 151 4.772624 TGGCTTGTCTAGTGTAGTTCATCT 59.227 41.667 0.00 0.00 0.00 2.90
151 152 5.246203 TGGCTTGTCTAGTGTAGTTCATCTT 59.754 40.000 0.00 0.00 0.00 2.40
152 153 5.808030 GGCTTGTCTAGTGTAGTTCATCTTC 59.192 44.000 0.00 0.00 0.00 2.87
153 154 5.808030 GCTTGTCTAGTGTAGTTCATCTTCC 59.192 44.000 0.00 0.00 0.00 3.46
154 155 5.562506 TGTCTAGTGTAGTTCATCTTCCG 57.437 43.478 0.00 0.00 0.00 4.30
155 156 4.142447 TGTCTAGTGTAGTTCATCTTCCGC 60.142 45.833 0.00 0.00 0.00 5.54
156 157 4.096682 GTCTAGTGTAGTTCATCTTCCGCT 59.903 45.833 0.00 0.00 0.00 5.52
157 158 3.238108 AGTGTAGTTCATCTTCCGCTG 57.762 47.619 0.00 0.00 0.00 5.18
158 159 1.661112 GTGTAGTTCATCTTCCGCTGC 59.339 52.381 0.00 0.00 0.00 5.25
159 160 1.275010 TGTAGTTCATCTTCCGCTGCA 59.725 47.619 0.00 0.00 0.00 4.41
160 161 2.093500 TGTAGTTCATCTTCCGCTGCAT 60.093 45.455 0.00 0.00 0.00 3.96
161 162 1.376543 AGTTCATCTTCCGCTGCATG 58.623 50.000 0.00 0.00 0.00 4.06
162 163 1.089920 GTTCATCTTCCGCTGCATGT 58.910 50.000 0.00 0.00 0.00 3.21
163 164 1.470098 GTTCATCTTCCGCTGCATGTT 59.530 47.619 0.00 0.00 0.00 2.71
164 165 1.825090 TCATCTTCCGCTGCATGTTT 58.175 45.000 0.00 0.00 0.00 2.83
165 166 2.984562 TCATCTTCCGCTGCATGTTTA 58.015 42.857 0.00 0.00 0.00 2.01
166 167 3.544684 TCATCTTCCGCTGCATGTTTAT 58.455 40.909 0.00 0.00 0.00 1.40
167 168 4.702831 TCATCTTCCGCTGCATGTTTATA 58.297 39.130 0.00 0.00 0.00 0.98
168 169 4.751600 TCATCTTCCGCTGCATGTTTATAG 59.248 41.667 0.00 0.00 0.00 1.31
169 170 3.466836 TCTTCCGCTGCATGTTTATAGG 58.533 45.455 0.00 0.00 0.00 2.57
170 171 3.118408 TCTTCCGCTGCATGTTTATAGGT 60.118 43.478 0.00 0.00 0.00 3.08
171 172 2.833794 TCCGCTGCATGTTTATAGGTC 58.166 47.619 0.00 0.00 0.00 3.85
172 173 2.434336 TCCGCTGCATGTTTATAGGTCT 59.566 45.455 0.00 0.00 0.00 3.85
173 174 3.118408 TCCGCTGCATGTTTATAGGTCTT 60.118 43.478 0.00 0.00 0.00 3.01
174 175 3.002656 CCGCTGCATGTTTATAGGTCTTG 59.997 47.826 0.00 0.00 0.00 3.02
175 176 3.623060 CGCTGCATGTTTATAGGTCTTGT 59.377 43.478 0.00 0.00 0.00 3.16
176 177 4.094887 CGCTGCATGTTTATAGGTCTTGTT 59.905 41.667 0.00 0.00 0.00 2.83
177 178 5.391950 CGCTGCATGTTTATAGGTCTTGTTT 60.392 40.000 0.00 0.00 0.00 2.83
178 179 6.389906 GCTGCATGTTTATAGGTCTTGTTTT 58.610 36.000 0.00 0.00 0.00 2.43
179 180 6.528072 GCTGCATGTTTATAGGTCTTGTTTTC 59.472 38.462 0.00 0.00 0.00 2.29
180 181 6.607689 TGCATGTTTATAGGTCTTGTTTTCG 58.392 36.000 0.00 0.00 0.00 3.46
181 182 6.205853 TGCATGTTTATAGGTCTTGTTTTCGT 59.794 34.615 0.00 0.00 0.00 3.85
182 183 6.523201 GCATGTTTATAGGTCTTGTTTTCGTG 59.477 38.462 0.00 0.00 0.00 4.35
183 184 7.581476 CATGTTTATAGGTCTTGTTTTCGTGT 58.419 34.615 0.00 0.00 0.00 4.49
184 185 7.556733 TGTTTATAGGTCTTGTTTTCGTGTT 57.443 32.000 0.00 0.00 0.00 3.32
185 186 7.987649 TGTTTATAGGTCTTGTTTTCGTGTTT 58.012 30.769 0.00 0.00 0.00 2.83
186 187 7.911205 TGTTTATAGGTCTTGTTTTCGTGTTTG 59.089 33.333 0.00 0.00 0.00 2.93
187 188 7.556733 TTATAGGTCTTGTTTTCGTGTTTGT 57.443 32.000 0.00 0.00 0.00 2.83
188 189 4.351131 AGGTCTTGTTTTCGTGTTTGTC 57.649 40.909 0.00 0.00 0.00 3.18
189 190 4.007659 AGGTCTTGTTTTCGTGTTTGTCT 58.992 39.130 0.00 0.00 0.00 3.41
190 191 4.457949 AGGTCTTGTTTTCGTGTTTGTCTT 59.542 37.500 0.00 0.00 0.00 3.01
191 192 4.791676 GGTCTTGTTTTCGTGTTTGTCTTC 59.208 41.667 0.00 0.00 0.00 2.87
192 193 4.490890 GTCTTGTTTTCGTGTTTGTCTTCG 59.509 41.667 0.00 0.00 0.00 3.79
193 194 4.389382 TCTTGTTTTCGTGTTTGTCTTCGA 59.611 37.500 0.00 0.00 0.00 3.71
194 195 4.665281 TGTTTTCGTGTTTGTCTTCGAA 57.335 36.364 0.00 0.00 39.83 3.71
195 196 5.032100 TGTTTTCGTGTTTGTCTTCGAAA 57.968 34.783 0.00 7.34 45.76 3.46
196 197 4.847217 TGTTTTCGTGTTTGTCTTCGAAAC 59.153 37.500 10.30 1.53 46.59 2.78
197 198 4.665281 TTTCGTGTTTGTCTTCGAAACA 57.335 36.364 0.00 4.27 43.75 2.83
198 199 4.868450 TTCGTGTTTGTCTTCGAAACAT 57.132 36.364 11.98 0.00 43.34 2.71
199 200 4.868450 TCGTGTTTGTCTTCGAAACATT 57.132 36.364 11.98 0.00 43.34 2.71
200 201 4.828704 TCGTGTTTGTCTTCGAAACATTC 58.171 39.130 11.98 9.49 43.34 2.67
201 202 4.330347 TCGTGTTTGTCTTCGAAACATTCA 59.670 37.500 11.98 11.18 43.34 2.57
202 203 5.007234 TCGTGTTTGTCTTCGAAACATTCAT 59.993 36.000 11.98 0.00 43.34 2.57
203 204 5.113975 CGTGTTTGTCTTCGAAACATTCATG 59.886 40.000 11.98 13.53 43.34 3.07
204 205 5.971202 GTGTTTGTCTTCGAAACATTCATGT 59.029 36.000 11.98 0.00 43.34 3.21
228 229 8.751335 TGTTTTGAAGACTTTCATAAAAATCGC 58.249 29.630 0.00 0.00 42.60 4.58
229 230 7.867445 TTTGAAGACTTTCATAAAAATCGCC 57.133 32.000 0.00 0.00 42.60 5.54
230 231 6.817765 TGAAGACTTTCATAAAAATCGCCT 57.182 33.333 0.00 0.00 38.37 5.52
231 232 7.915293 TGAAGACTTTCATAAAAATCGCCTA 57.085 32.000 0.00 0.00 38.37 3.93
232 233 8.506168 TGAAGACTTTCATAAAAATCGCCTAT 57.494 30.769 0.00 0.00 38.37 2.57
233 234 8.956426 TGAAGACTTTCATAAAAATCGCCTATT 58.044 29.630 0.00 0.00 38.37 1.73
234 235 9.439537 GAAGACTTTCATAAAAATCGCCTATTC 57.560 33.333 0.00 0.00 33.38 1.75
235 236 8.506168 AGACTTTCATAAAAATCGCCTATTCA 57.494 30.769 0.00 0.00 0.00 2.57
236 237 8.398665 AGACTTTCATAAAAATCGCCTATTCAC 58.601 33.333 0.00 0.00 0.00 3.18
237 238 7.480810 ACTTTCATAAAAATCGCCTATTCACC 58.519 34.615 0.00 0.00 0.00 4.02
238 239 6.385649 TTCATAAAAATCGCCTATTCACCC 57.614 37.500 0.00 0.00 0.00 4.61
239 240 4.825085 TCATAAAAATCGCCTATTCACCCC 59.175 41.667 0.00 0.00 0.00 4.95
240 241 2.067365 AAAATCGCCTATTCACCCCC 57.933 50.000 0.00 0.00 0.00 5.40
257 258 4.354943 CCACCCTCCACCCCCTCT 62.355 72.222 0.00 0.00 0.00 3.69
258 259 2.784984 CACCCTCCACCCCCTCTA 59.215 66.667 0.00 0.00 0.00 2.43
259 260 1.383248 CACCCTCCACCCCCTCTAG 60.383 68.421 0.00 0.00 0.00 2.43
260 261 1.867487 ACCCTCCACCCCCTCTAGT 60.867 63.158 0.00 0.00 0.00 2.57
261 262 1.075151 CCCTCCACCCCCTCTAGTC 60.075 68.421 0.00 0.00 0.00 2.59
262 263 1.455959 CCTCCACCCCCTCTAGTCG 60.456 68.421 0.00 0.00 0.00 4.18
263 264 1.613610 CTCCACCCCCTCTAGTCGA 59.386 63.158 0.00 0.00 0.00 4.20
264 265 0.186386 CTCCACCCCCTCTAGTCGAT 59.814 60.000 0.00 0.00 0.00 3.59
265 266 1.424302 CTCCACCCCCTCTAGTCGATA 59.576 57.143 0.00 0.00 0.00 2.92
266 267 1.854939 TCCACCCCCTCTAGTCGATAA 59.145 52.381 0.00 0.00 0.00 1.75
267 268 1.962100 CCACCCCCTCTAGTCGATAAC 59.038 57.143 0.00 0.00 0.00 1.89
268 269 2.424523 CCACCCCCTCTAGTCGATAACT 60.425 54.545 0.00 0.00 42.33 2.24
269 270 3.181436 CCACCCCCTCTAGTCGATAACTA 60.181 52.174 0.00 0.00 39.55 2.24
281 282 5.411781 AGTCGATAACTAGCACTTTCAAGG 58.588 41.667 0.00 0.00 36.07 3.61
282 283 5.185249 AGTCGATAACTAGCACTTTCAAGGA 59.815 40.000 0.00 0.00 36.07 3.36
283 284 5.867716 GTCGATAACTAGCACTTTCAAGGAA 59.132 40.000 0.00 0.00 0.00 3.36
284 285 5.867716 TCGATAACTAGCACTTTCAAGGAAC 59.132 40.000 0.00 0.00 0.00 3.62
285 286 5.220228 CGATAACTAGCACTTTCAAGGAACG 60.220 44.000 0.00 0.00 0.00 3.95
286 287 3.746045 ACTAGCACTTTCAAGGAACGA 57.254 42.857 0.00 0.00 0.00 3.85
287 288 4.067972 ACTAGCACTTTCAAGGAACGAA 57.932 40.909 0.00 0.00 0.00 3.85
288 289 4.058817 ACTAGCACTTTCAAGGAACGAAG 58.941 43.478 0.00 0.00 0.00 3.79
289 290 2.222027 AGCACTTTCAAGGAACGAAGG 58.778 47.619 0.00 0.00 0.00 3.46
290 291 2.158813 AGCACTTTCAAGGAACGAAGGA 60.159 45.455 0.00 0.00 0.00 3.36
291 292 2.616842 GCACTTTCAAGGAACGAAGGAA 59.383 45.455 0.00 0.00 0.00 3.36
292 293 3.304057 GCACTTTCAAGGAACGAAGGAAG 60.304 47.826 0.00 0.00 0.00 3.46
302 303 5.513233 AGGAACGAAGGAAGTAGTATACCA 58.487 41.667 0.00 0.00 44.47 3.25
303 304 5.954150 AGGAACGAAGGAAGTAGTATACCAA 59.046 40.000 0.00 0.00 44.47 3.67
312 313 9.733907 AAGGAAGTAGTATACCAACCCTTAATA 57.266 33.333 11.58 0.00 44.47 0.98
317 318 9.842775 AGTAGTATACCAACCCTTAATAAAAGC 57.157 33.333 0.00 0.00 44.47 3.51
319 320 6.769341 AGTATACCAACCCTTAATAAAAGCCG 59.231 38.462 0.00 0.00 0.00 5.52
321 322 2.159156 CCAACCCTTAATAAAAGCCGGC 60.159 50.000 21.89 21.89 0.00 6.13
352 353 0.179062 CACTAGCTCTCCCATGCACC 60.179 60.000 0.00 0.00 0.00 5.01
387 388 6.265196 TGACAACAAGAAGTTTGGAGCATATT 59.735 34.615 0.00 0.00 38.74 1.28
415 416 4.500887 GGATACCGTGCACTAAGCTAATCA 60.501 45.833 16.19 0.00 45.94 2.57
448 449 1.228063 ATGAGACATGCATCCGGCC 60.228 57.895 0.00 0.00 43.89 6.13
487 490 0.935898 CATCGTCTGATTGAGCCTGC 59.064 55.000 0.00 0.00 30.49 4.85
521 524 3.383761 CCATTGTCCAAGAACAGTTTGC 58.616 45.455 0.00 0.00 0.00 3.68
542 551 1.403249 GGATTGCAGCCACAACATCAC 60.403 52.381 3.04 0.00 31.03 3.06
2001 3318 4.521146 AGGTAGCATTCAATCCTGTTCTG 58.479 43.478 0.00 0.00 0.00 3.02
2139 3457 1.386550 GGGAAAAGCTTAGGGGGCA 59.613 57.895 0.00 0.00 0.00 5.36
2688 4059 7.757624 TGTCTAAACTGTGTTTTCCAATTCAAC 59.242 33.333 0.94 0.00 0.00 3.18
2696 4067 7.703328 TGTGTTTTCCAATTCAACTCTTACTC 58.297 34.615 0.00 0.00 0.00 2.59
2747 4118 8.390354 TCAGATTGCATAGATCTTTGTTTAACG 58.610 33.333 13.74 1.61 31.66 3.18
2757 4128 7.254852 AGATCTTTGTTTAACGTTGCTTTGAA 58.745 30.769 11.99 0.00 0.00 2.69
2759 4130 7.820044 TCTTTGTTTAACGTTGCTTTGAAAT 57.180 28.000 11.99 0.00 0.00 2.17
2774 4145 5.798934 GCTTTGAAATCTCTTGTGCATACTG 59.201 40.000 0.00 0.00 0.00 2.74
2789 4160 3.363378 GCATACTGCATAGCGTCATGTTC 60.363 47.826 0.00 0.00 44.26 3.18
2801 4172 3.366724 GCGTCATGTTCTGTCGATACAAA 59.633 43.478 0.00 0.00 38.45 2.83
2815 4186 4.277174 TCGATACAAACCAACTGCATTTGT 59.723 37.500 16.95 16.95 45.82 2.83
2824 4195 7.856145 AACCAACTGCATTTGTATTTGAAAA 57.144 28.000 14.83 0.00 0.00 2.29
2861 4232 6.867816 GTGTTTCATTTATCATCAGTGGCAAA 59.132 34.615 0.00 0.00 0.00 3.68
2863 4234 5.581126 TCATTTATCATCAGTGGCAAACC 57.419 39.130 0.00 0.00 0.00 3.27
2864 4235 5.263599 TCATTTATCATCAGTGGCAAACCT 58.736 37.500 0.00 0.00 36.63 3.50
2867 4238 7.560991 TCATTTATCATCAGTGGCAAACCTAAT 59.439 33.333 0.00 0.00 36.63 1.73
2868 4239 7.716799 TTTATCATCAGTGGCAAACCTAATT 57.283 32.000 0.00 0.00 36.63 1.40
2947 4318 3.034721 TGACCGTTGTTAGCAGTAAGG 57.965 47.619 0.00 0.00 0.00 2.69
2976 4348 2.574006 AAGATTGCAGCACTGAAGGA 57.426 45.000 0.00 0.00 0.00 3.36
3334 5153 6.151144 ACTGAAGTATGTTGCCATTTCTTACC 59.849 38.462 0.00 0.00 32.29 2.85
3391 5210 7.376072 GCGAAATTTGACATATTAGCAAGTACC 59.624 37.037 0.00 0.00 0.00 3.34
3479 6449 9.835389 TTTGTTAGCTGGAAAAGTTAAGTACTA 57.165 29.630 0.00 0.00 35.54 1.82
3505 6475 2.356022 CCTGGTTGGTGCATATGTCTGA 60.356 50.000 4.29 0.00 0.00 3.27
3510 6480 1.160329 GGTGCATATGTCTGACGGCC 61.160 60.000 4.29 0.00 0.00 6.13
3612 6582 1.550976 AGCTTAGCAGACACCCAGTAC 59.449 52.381 7.07 0.00 0.00 2.73
3613 6583 1.275291 GCTTAGCAGACACCCAGTACA 59.725 52.381 0.00 0.00 0.00 2.90
3628 6598 6.092670 CACCCAGTACAGTTGTTATGATGAAG 59.907 42.308 0.00 0.00 0.00 3.02
3653 6623 6.976925 GCATTGTCTTCCATTATTCTGAAAGG 59.023 38.462 0.00 0.00 0.00 3.11
3656 6626 7.452880 TGTCTTCCATTATTCTGAAAGGTTG 57.547 36.000 0.00 0.00 0.00 3.77
3676 6646 2.287644 TGTCACAAACTGATCTTGCGTG 59.712 45.455 0.00 0.00 0.00 5.34
3878 6849 8.921205 TGTTTCTGTTTACTCCTATATACTCCC 58.079 37.037 0.00 0.00 0.00 4.30
3879 6850 9.145442 GTTTCTGTTTACTCCTATATACTCCCT 57.855 37.037 0.00 0.00 0.00 4.20
3880 6851 8.937207 TTCTGTTTACTCCTATATACTCCCTC 57.063 38.462 0.00 0.00 0.00 4.30
3881 6852 8.290463 TCTGTTTACTCCTATATACTCCCTCT 57.710 38.462 0.00 0.00 0.00 3.69
3882 6853 8.164733 TCTGTTTACTCCTATATACTCCCTCTG 58.835 40.741 0.00 0.00 0.00 3.35
3883 6854 7.823635 TGTTTACTCCTATATACTCCCTCTGT 58.176 38.462 0.00 0.00 0.00 3.41
3884 6855 8.952602 TGTTTACTCCTATATACTCCCTCTGTA 58.047 37.037 0.00 0.00 0.00 2.74
3885 6856 9.230122 GTTTACTCCTATATACTCCCTCTGTAC 57.770 40.741 0.00 0.00 0.00 2.90
3886 6857 6.391479 ACTCCTATATACTCCCTCTGTACC 57.609 45.833 0.00 0.00 0.00 3.34
3887 6858 5.045724 ACTCCTATATACTCCCTCTGTACCG 60.046 48.000 0.00 0.00 0.00 4.02
3888 6859 5.096521 TCCTATATACTCCCTCTGTACCGA 58.903 45.833 0.00 0.00 0.00 4.69
3889 6860 5.549228 TCCTATATACTCCCTCTGTACCGAA 59.451 44.000 0.00 0.00 0.00 4.30
3890 6861 6.044754 TCCTATATACTCCCTCTGTACCGAAA 59.955 42.308 0.00 0.00 0.00 3.46
3891 6862 6.890814 CCTATATACTCCCTCTGTACCGAAAT 59.109 42.308 0.00 0.00 0.00 2.17
3892 6863 8.051535 CCTATATACTCCCTCTGTACCGAAATA 58.948 40.741 0.00 0.00 0.00 1.40
3893 6864 7.700022 ATATACTCCCTCTGTACCGAAATAC 57.300 40.000 0.00 0.00 0.00 1.89
3894 6865 3.978610 ACTCCCTCTGTACCGAAATACT 58.021 45.455 0.00 0.00 0.00 2.12
3895 6866 4.351127 ACTCCCTCTGTACCGAAATACTT 58.649 43.478 0.00 0.00 0.00 2.24
3896 6867 4.776308 ACTCCCTCTGTACCGAAATACTTT 59.224 41.667 0.00 0.00 0.00 2.66
3897 6868 5.080969 TCCCTCTGTACCGAAATACTTTG 57.919 43.478 0.00 0.00 0.00 2.77
3898 6869 4.529377 TCCCTCTGTACCGAAATACTTTGT 59.471 41.667 0.00 0.00 0.00 2.83
3899 6870 5.716228 TCCCTCTGTACCGAAATACTTTGTA 59.284 40.000 0.00 0.00 0.00 2.41
3900 6871 6.040878 CCCTCTGTACCGAAATACTTTGTAG 58.959 44.000 0.00 0.00 0.00 2.74
3901 6872 6.350780 CCCTCTGTACCGAAATACTTTGTAGT 60.351 42.308 0.00 0.00 38.44 2.73
3902 6873 7.095270 CCTCTGTACCGAAATACTTTGTAGTT 58.905 38.462 0.00 0.00 35.78 2.24
3903 6874 8.246180 CCTCTGTACCGAAATACTTTGTAGTTA 58.754 37.037 0.00 0.00 35.78 2.24
3904 6875 9.286946 CTCTGTACCGAAATACTTTGTAGTTAG 57.713 37.037 0.00 0.00 35.78 2.34
3905 6876 8.246180 TCTGTACCGAAATACTTTGTAGTTAGG 58.754 37.037 12.82 12.82 35.78 2.69
3906 6877 7.322664 TGTACCGAAATACTTTGTAGTTAGGG 58.677 38.462 16.68 11.40 35.78 3.53
3907 6878 6.610075 ACCGAAATACTTTGTAGTTAGGGA 57.390 37.500 16.68 0.00 35.78 4.20
3908 6879 7.008021 ACCGAAATACTTTGTAGTTAGGGAA 57.992 36.000 16.68 0.00 35.78 3.97
3909 6880 7.452562 ACCGAAATACTTTGTAGTTAGGGAAA 58.547 34.615 16.68 0.00 35.78 3.13
3910 6881 7.605309 ACCGAAATACTTTGTAGTTAGGGAAAG 59.395 37.037 16.68 0.00 35.78 2.62
3911 6882 7.413767 CCGAAATACTTTGTAGTTAGGGAAAGC 60.414 40.741 8.46 0.00 35.78 3.51
3912 6883 7.333672 CGAAATACTTTGTAGTTAGGGAAAGCT 59.666 37.037 0.00 0.00 35.78 3.74
3913 6884 9.662947 GAAATACTTTGTAGTTAGGGAAAGCTA 57.337 33.333 0.00 0.00 35.78 3.32
3914 6885 9.668497 AAATACTTTGTAGTTAGGGAAAGCTAG 57.332 33.333 0.00 0.00 35.78 3.42
3915 6886 6.683312 ACTTTGTAGTTAGGGAAAGCTAGT 57.317 37.500 0.00 0.00 0.00 2.57
3916 6887 7.787623 ACTTTGTAGTTAGGGAAAGCTAGTA 57.212 36.000 0.00 0.00 0.00 1.82
3917 6888 7.609960 ACTTTGTAGTTAGGGAAAGCTAGTAC 58.390 38.462 0.00 0.00 0.00 2.73
3918 6889 7.234166 ACTTTGTAGTTAGGGAAAGCTAGTACA 59.766 37.037 0.00 0.00 0.00 2.90
3919 6890 7.543359 TTGTAGTTAGGGAAAGCTAGTACAA 57.457 36.000 6.70 6.70 0.00 2.41
3920 6891 7.166691 TGTAGTTAGGGAAAGCTAGTACAAG 57.833 40.000 0.00 0.00 0.00 3.16
3921 6892 5.087391 AGTTAGGGAAAGCTAGTACAAGC 57.913 43.478 0.00 0.00 43.11 4.01
3922 6893 4.081031 AGTTAGGGAAAGCTAGTACAAGCC 60.081 45.833 0.00 0.00 43.86 4.35
3923 6894 1.560146 AGGGAAAGCTAGTACAAGCCC 59.440 52.381 0.00 0.00 43.86 5.19
3924 6895 1.408405 GGGAAAGCTAGTACAAGCCCC 60.408 57.143 0.00 0.00 43.86 5.80
3925 6896 1.408405 GGAAAGCTAGTACAAGCCCCC 60.408 57.143 0.00 0.00 43.86 5.40
3953 6924 4.819105 CAAGTATTGTGGTACAGAGGGA 57.181 45.455 0.00 0.00 42.34 4.20
3954 6925 4.759782 CAAGTATTGTGGTACAGAGGGAG 58.240 47.826 0.00 0.00 42.34 4.30
3955 6926 4.062490 AGTATTGTGGTACAGAGGGAGT 57.938 45.455 0.00 0.00 41.80 3.85
3956 6927 5.202746 AGTATTGTGGTACAGAGGGAGTA 57.797 43.478 0.00 0.00 41.80 2.59
3963 6934 8.792830 TTGTGGTACAGAGGGAGTATATATTT 57.207 34.615 0.00 0.00 41.80 1.40
3964 6935 8.190326 TGTGGTACAGAGGGAGTATATATTTG 57.810 38.462 0.00 0.00 41.80 2.32
3971 6942 7.072454 ACAGAGGGAGTATATATTTGGCTCAAA 59.928 37.037 3.33 3.33 37.75 2.69
4184 7157 4.755266 ATTGATGGTGGTAGACTGGTAC 57.245 45.455 0.00 0.00 0.00 3.34
4197 7170 3.166679 GACTGGTACTTCCTGAACTCCT 58.833 50.000 0.00 0.00 38.33 3.69
4210 7184 2.178984 TGAACTCCTGTTTTGGGGGAAT 59.821 45.455 0.00 0.00 36.39 3.01
4212 7186 1.503347 ACTCCTGTTTTGGGGGAATGT 59.497 47.619 0.00 0.00 0.00 2.71
4215 7189 1.347378 CCTGTTTTGGGGGAATGTTGG 59.653 52.381 0.00 0.00 0.00 3.77
4221 7195 0.407918 TGGGGGAATGTTGGGAGAAC 59.592 55.000 0.00 0.00 0.00 3.01
4241 7215 2.430694 ACTTTGGGTTTGTCAGGCTTTC 59.569 45.455 0.00 0.00 0.00 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.081406 TGAAGTCAAACAGGCATAGCAAT 58.919 39.130 0.00 0.00 0.00 3.56
2 3 2.813754 GTGAAGTCAAACAGGCATAGCA 59.186 45.455 0.00 0.00 0.00 3.49
3 4 3.077359 AGTGAAGTCAAACAGGCATAGC 58.923 45.455 0.00 0.00 0.00 2.97
4 5 4.067896 ACAGTGAAGTCAAACAGGCATAG 58.932 43.478 0.00 0.00 0.00 2.23
6 7 2.620115 CACAGTGAAGTCAAACAGGCAT 59.380 45.455 0.00 0.00 0.00 4.40
7 8 2.016318 CACAGTGAAGTCAAACAGGCA 58.984 47.619 0.00 0.00 0.00 4.75
8 9 2.017049 ACACAGTGAAGTCAAACAGGC 58.983 47.619 7.81 0.00 0.00 4.85
9 10 3.063997 GTCACACAGTGAAGTCAAACAGG 59.936 47.826 7.81 0.00 44.49 4.00
10 11 3.935203 AGTCACACAGTGAAGTCAAACAG 59.065 43.478 7.81 0.00 44.49 3.16
11 12 3.937814 AGTCACACAGTGAAGTCAAACA 58.062 40.909 7.81 0.00 44.49 2.83
12 13 5.109903 AGTAGTCACACAGTGAAGTCAAAC 58.890 41.667 7.81 0.00 44.49 2.93
13 14 5.339008 AGTAGTCACACAGTGAAGTCAAA 57.661 39.130 7.81 0.00 44.49 2.69
14 15 5.109210 CAAGTAGTCACACAGTGAAGTCAA 58.891 41.667 7.81 0.00 44.49 3.18
15 16 4.159693 ACAAGTAGTCACACAGTGAAGTCA 59.840 41.667 7.81 0.00 44.49 3.41
16 17 4.683832 ACAAGTAGTCACACAGTGAAGTC 58.316 43.478 7.81 0.00 44.49 3.01
17 18 4.737855 ACAAGTAGTCACACAGTGAAGT 57.262 40.909 7.81 0.49 44.49 3.01
18 19 5.233050 CAGAACAAGTAGTCACACAGTGAAG 59.767 44.000 7.81 0.00 44.49 3.02
19 20 5.105513 TCAGAACAAGTAGTCACACAGTGAA 60.106 40.000 7.81 0.00 44.49 3.18
20 21 4.401202 TCAGAACAAGTAGTCACACAGTGA 59.599 41.667 7.81 0.00 40.50 3.41
21 22 4.682787 TCAGAACAAGTAGTCACACAGTG 58.317 43.478 0.00 0.00 34.45 3.66
22 23 5.537300 ATCAGAACAAGTAGTCACACAGT 57.463 39.130 0.00 0.00 0.00 3.55
23 24 5.178252 CCAATCAGAACAAGTAGTCACACAG 59.822 44.000 0.00 0.00 0.00 3.66
24 25 5.056480 CCAATCAGAACAAGTAGTCACACA 58.944 41.667 0.00 0.00 0.00 3.72
25 26 4.083802 GCCAATCAGAACAAGTAGTCACAC 60.084 45.833 0.00 0.00 0.00 3.82
26 27 4.065088 GCCAATCAGAACAAGTAGTCACA 58.935 43.478 0.00 0.00 0.00 3.58
27 28 4.319177 AGCCAATCAGAACAAGTAGTCAC 58.681 43.478 0.00 0.00 0.00 3.67
28 29 4.623932 AGCCAATCAGAACAAGTAGTCA 57.376 40.909 0.00 0.00 0.00 3.41
29 30 4.092091 CGAAGCCAATCAGAACAAGTAGTC 59.908 45.833 0.00 0.00 0.00 2.59
30 31 3.997021 CGAAGCCAATCAGAACAAGTAGT 59.003 43.478 0.00 0.00 0.00 2.73
31 32 3.997021 ACGAAGCCAATCAGAACAAGTAG 59.003 43.478 0.00 0.00 0.00 2.57
32 33 4.002906 ACGAAGCCAATCAGAACAAGTA 57.997 40.909 0.00 0.00 0.00 2.24
33 34 2.851195 ACGAAGCCAATCAGAACAAGT 58.149 42.857 0.00 0.00 0.00 3.16
34 35 3.997021 AGTACGAAGCCAATCAGAACAAG 59.003 43.478 0.00 0.00 0.00 3.16
35 36 4.002906 AGTACGAAGCCAATCAGAACAA 57.997 40.909 0.00 0.00 0.00 2.83
36 37 3.678056 AGTACGAAGCCAATCAGAACA 57.322 42.857 0.00 0.00 0.00 3.18
37 38 5.593010 AGATAGTACGAAGCCAATCAGAAC 58.407 41.667 0.00 0.00 0.00 3.01
38 39 5.854010 AGATAGTACGAAGCCAATCAGAA 57.146 39.130 0.00 0.00 0.00 3.02
39 40 5.221263 GGAAGATAGTACGAAGCCAATCAGA 60.221 44.000 0.00 0.00 0.00 3.27
40 41 4.985409 GGAAGATAGTACGAAGCCAATCAG 59.015 45.833 0.00 0.00 0.00 2.90
41 42 4.404394 TGGAAGATAGTACGAAGCCAATCA 59.596 41.667 0.00 0.00 0.00 2.57
42 43 4.945246 TGGAAGATAGTACGAAGCCAATC 58.055 43.478 0.00 0.00 0.00 2.67
43 44 5.511545 GGATGGAAGATAGTACGAAGCCAAT 60.512 44.000 0.00 0.00 0.00 3.16
44 45 4.202223 GGATGGAAGATAGTACGAAGCCAA 60.202 45.833 0.00 0.00 0.00 4.52
45 46 3.321111 GGATGGAAGATAGTACGAAGCCA 59.679 47.826 0.00 0.00 0.00 4.75
46 47 3.306156 GGGATGGAAGATAGTACGAAGCC 60.306 52.174 0.00 0.00 0.00 4.35
47 48 3.612004 CGGGATGGAAGATAGTACGAAGC 60.612 52.174 0.00 0.00 0.00 3.86
48 49 3.819337 TCGGGATGGAAGATAGTACGAAG 59.181 47.826 0.00 0.00 0.00 3.79
49 50 3.824133 TCGGGATGGAAGATAGTACGAA 58.176 45.455 0.00 0.00 0.00 3.85
50 51 3.497103 TCGGGATGGAAGATAGTACGA 57.503 47.619 0.00 0.00 0.00 3.43
51 52 3.128938 GGATCGGGATGGAAGATAGTACG 59.871 52.174 0.00 0.00 0.00 3.67
52 53 4.345854 AGGATCGGGATGGAAGATAGTAC 58.654 47.826 0.00 0.00 0.00 2.73
53 54 4.676799 AGGATCGGGATGGAAGATAGTA 57.323 45.455 0.00 0.00 0.00 1.82
54 55 3.551635 AGGATCGGGATGGAAGATAGT 57.448 47.619 0.00 0.00 0.00 2.12
55 56 4.605183 AGTAGGATCGGGATGGAAGATAG 58.395 47.826 0.00 0.00 0.00 2.08
56 57 4.676799 AGTAGGATCGGGATGGAAGATA 57.323 45.455 0.00 0.00 0.00 1.98
57 58 3.551635 AGTAGGATCGGGATGGAAGAT 57.448 47.619 0.00 0.00 0.00 2.40
58 59 3.499926 GGTAGTAGGATCGGGATGGAAGA 60.500 52.174 0.00 0.00 0.00 2.87
59 60 2.826725 GGTAGTAGGATCGGGATGGAAG 59.173 54.545 0.00 0.00 0.00 3.46
60 61 2.449730 AGGTAGTAGGATCGGGATGGAA 59.550 50.000 0.00 0.00 0.00 3.53
61 62 2.071372 AGGTAGTAGGATCGGGATGGA 58.929 52.381 0.00 0.00 0.00 3.41
62 63 2.606751 AGGTAGTAGGATCGGGATGG 57.393 55.000 0.00 0.00 0.00 3.51
63 64 3.018149 GCTAGGTAGTAGGATCGGGATG 58.982 54.545 0.00 0.00 0.00 3.51
64 65 2.920941 AGCTAGGTAGTAGGATCGGGAT 59.079 50.000 0.00 0.00 0.00 3.85
65 66 2.040012 CAGCTAGGTAGTAGGATCGGGA 59.960 54.545 0.00 0.00 0.00 5.14
66 67 2.438411 CAGCTAGGTAGTAGGATCGGG 58.562 57.143 0.00 0.00 0.00 5.14
67 68 1.813786 GCAGCTAGGTAGTAGGATCGG 59.186 57.143 0.00 0.00 0.00 4.18
68 69 2.785562 AGCAGCTAGGTAGTAGGATCG 58.214 52.381 0.00 0.00 0.00 3.69
69 70 5.502079 TGATAGCAGCTAGGTAGTAGGATC 58.498 45.833 8.43 0.00 32.98 3.36
70 71 5.014755 ACTGATAGCAGCTAGGTAGTAGGAT 59.985 44.000 8.16 0.00 46.26 3.24
71 72 4.351407 ACTGATAGCAGCTAGGTAGTAGGA 59.649 45.833 8.16 0.00 46.26 2.94
72 73 4.658063 ACTGATAGCAGCTAGGTAGTAGG 58.342 47.826 8.16 0.00 46.26 3.18
73 74 5.309638 TGACTGATAGCAGCTAGGTAGTAG 58.690 45.833 8.16 2.73 46.26 2.57
74 75 5.306114 TGACTGATAGCAGCTAGGTAGTA 57.694 43.478 8.16 0.00 46.26 1.82
75 76 4.171878 TGACTGATAGCAGCTAGGTAGT 57.828 45.455 8.16 11.28 46.26 2.73
76 77 4.764308 TGATGACTGATAGCAGCTAGGTAG 59.236 45.833 8.16 8.30 46.26 3.18
77 78 4.729868 TGATGACTGATAGCAGCTAGGTA 58.270 43.478 8.16 0.00 46.26 3.08
78 79 3.570540 TGATGACTGATAGCAGCTAGGT 58.429 45.455 8.16 6.72 46.26 3.08
79 80 4.496360 CATGATGACTGATAGCAGCTAGG 58.504 47.826 8.16 3.57 46.26 3.02
80 81 3.927758 GCATGATGACTGATAGCAGCTAG 59.072 47.826 8.16 0.00 46.26 3.42
81 82 3.577415 AGCATGATGACTGATAGCAGCTA 59.423 43.478 8.16 4.10 46.26 3.32
82 83 2.369203 AGCATGATGACTGATAGCAGCT 59.631 45.455 8.16 0.00 46.26 4.24
83 84 2.768698 AGCATGATGACTGATAGCAGC 58.231 47.619 8.16 1.57 46.26 5.25
85 86 3.881089 CCAAAGCATGATGACTGATAGCA 59.119 43.478 0.00 0.00 0.00 3.49
86 87 3.881688 ACCAAAGCATGATGACTGATAGC 59.118 43.478 0.00 0.00 0.00 2.97
87 88 6.094464 TGAAACCAAAGCATGATGACTGATAG 59.906 38.462 0.00 0.00 0.00 2.08
88 89 5.945191 TGAAACCAAAGCATGATGACTGATA 59.055 36.000 0.00 0.00 0.00 2.15
89 90 4.768448 TGAAACCAAAGCATGATGACTGAT 59.232 37.500 0.00 0.00 0.00 2.90
90 91 4.143543 TGAAACCAAAGCATGATGACTGA 58.856 39.130 0.00 0.00 0.00 3.41
91 92 4.508461 TGAAACCAAAGCATGATGACTG 57.492 40.909 0.00 0.00 0.00 3.51
92 93 5.948162 AGTATGAAACCAAAGCATGATGACT 59.052 36.000 0.00 0.00 0.00 3.41
93 94 6.199937 AGTATGAAACCAAAGCATGATGAC 57.800 37.500 0.00 0.00 0.00 3.06
94 95 6.209192 ACAAGTATGAAACCAAAGCATGATGA 59.791 34.615 0.00 0.00 0.00 2.92
95 96 6.392354 ACAAGTATGAAACCAAAGCATGATG 58.608 36.000 0.00 0.00 0.00 3.07
96 97 6.435277 AGACAAGTATGAAACCAAAGCATGAT 59.565 34.615 0.00 0.00 0.00 2.45
97 98 5.769662 AGACAAGTATGAAACCAAAGCATGA 59.230 36.000 0.00 0.00 0.00 3.07
98 99 5.860182 CAGACAAGTATGAAACCAAAGCATG 59.140 40.000 0.00 0.00 0.00 4.06
99 100 5.769662 TCAGACAAGTATGAAACCAAAGCAT 59.230 36.000 0.00 0.00 0.00 3.79
100 101 5.008613 GTCAGACAAGTATGAAACCAAAGCA 59.991 40.000 0.00 0.00 32.12 3.91
101 102 5.239525 AGTCAGACAAGTATGAAACCAAAGC 59.760 40.000 2.66 0.00 32.12 3.51
102 103 6.867662 AGTCAGACAAGTATGAAACCAAAG 57.132 37.500 2.66 0.00 32.12 2.77
103 104 7.390440 CCATAGTCAGACAAGTATGAAACCAAA 59.610 37.037 2.66 0.00 35.45 3.28
104 105 6.878923 CCATAGTCAGACAAGTATGAAACCAA 59.121 38.462 2.66 0.00 35.45 3.67
105 106 6.406370 CCATAGTCAGACAAGTATGAAACCA 58.594 40.000 2.66 0.00 35.45 3.67
106 107 5.294552 GCCATAGTCAGACAAGTATGAAACC 59.705 44.000 2.66 0.00 35.45 3.27
107 108 6.109359 AGCCATAGTCAGACAAGTATGAAAC 58.891 40.000 2.66 0.00 35.45 2.78
108 109 6.299805 AGCCATAGTCAGACAAGTATGAAA 57.700 37.500 2.66 0.00 35.45 2.69
109 110 5.939764 AGCCATAGTCAGACAAGTATGAA 57.060 39.130 2.66 0.00 35.45 2.57
110 111 5.187772 ACAAGCCATAGTCAGACAAGTATGA 59.812 40.000 2.66 0.00 35.45 2.15
111 112 5.423015 ACAAGCCATAGTCAGACAAGTATG 58.577 41.667 2.66 2.60 33.92 2.39
112 113 5.423610 AGACAAGCCATAGTCAGACAAGTAT 59.576 40.000 2.66 0.00 37.23 2.12
113 114 4.772624 AGACAAGCCATAGTCAGACAAGTA 59.227 41.667 2.66 0.00 37.23 2.24
114 115 3.580458 AGACAAGCCATAGTCAGACAAGT 59.420 43.478 2.66 0.00 37.23 3.16
115 116 4.199432 AGACAAGCCATAGTCAGACAAG 57.801 45.455 2.66 0.00 37.23 3.16
116 117 4.772624 ACTAGACAAGCCATAGTCAGACAA 59.227 41.667 2.66 0.00 37.23 3.18
117 118 4.158579 CACTAGACAAGCCATAGTCAGACA 59.841 45.833 2.66 0.00 37.23 3.41
118 119 4.158764 ACACTAGACAAGCCATAGTCAGAC 59.841 45.833 0.00 0.00 37.23 3.51
119 120 4.344978 ACACTAGACAAGCCATAGTCAGA 58.655 43.478 0.00 0.00 37.23 3.27
120 121 4.727507 ACACTAGACAAGCCATAGTCAG 57.272 45.455 0.00 0.00 37.23 3.51
121 122 5.262009 ACTACACTAGACAAGCCATAGTCA 58.738 41.667 0.00 0.00 37.23 3.41
122 123 5.838531 ACTACACTAGACAAGCCATAGTC 57.161 43.478 0.00 0.00 35.02 2.59
123 124 5.715279 TGAACTACACTAGACAAGCCATAGT 59.285 40.000 0.00 0.00 0.00 2.12
124 125 6.208988 TGAACTACACTAGACAAGCCATAG 57.791 41.667 0.00 0.00 0.00 2.23
125 126 6.607600 AGATGAACTACACTAGACAAGCCATA 59.392 38.462 0.00 0.00 0.00 2.74
126 127 5.423610 AGATGAACTACACTAGACAAGCCAT 59.576 40.000 0.00 0.00 0.00 4.40
127 128 4.772624 AGATGAACTACACTAGACAAGCCA 59.227 41.667 0.00 0.00 0.00 4.75
128 129 5.331876 AGATGAACTACACTAGACAAGCC 57.668 43.478 0.00 0.00 0.00 4.35
129 130 5.808030 GGAAGATGAACTACACTAGACAAGC 59.192 44.000 0.00 0.00 0.00 4.01
130 131 6.030849 CGGAAGATGAACTACACTAGACAAG 58.969 44.000 0.00 0.00 0.00 3.16
131 132 5.621555 GCGGAAGATGAACTACACTAGACAA 60.622 44.000 0.00 0.00 0.00 3.18
132 133 4.142447 GCGGAAGATGAACTACACTAGACA 60.142 45.833 0.00 0.00 0.00 3.41
133 134 4.096682 AGCGGAAGATGAACTACACTAGAC 59.903 45.833 0.00 0.00 0.00 2.59
134 135 4.270834 AGCGGAAGATGAACTACACTAGA 58.729 43.478 0.00 0.00 0.00 2.43
135 136 4.640789 AGCGGAAGATGAACTACACTAG 57.359 45.455 0.00 0.00 0.00 2.57
147 148 4.067896 CCTATAAACATGCAGCGGAAGAT 58.932 43.478 0.00 0.00 0.00 2.40
148 149 3.118408 ACCTATAAACATGCAGCGGAAGA 60.118 43.478 0.00 0.00 0.00 2.87
149 150 3.206150 ACCTATAAACATGCAGCGGAAG 58.794 45.455 0.00 0.00 0.00 3.46
150 151 3.118408 AGACCTATAAACATGCAGCGGAA 60.118 43.478 0.00 0.00 0.00 4.30
151 152 2.434336 AGACCTATAAACATGCAGCGGA 59.566 45.455 0.00 0.00 0.00 5.54
152 153 2.838736 AGACCTATAAACATGCAGCGG 58.161 47.619 0.00 0.00 0.00 5.52
153 154 3.623060 ACAAGACCTATAAACATGCAGCG 59.377 43.478 0.00 0.00 0.00 5.18
154 155 5.567138 AACAAGACCTATAAACATGCAGC 57.433 39.130 0.00 0.00 0.00 5.25
155 156 6.742718 CGAAAACAAGACCTATAAACATGCAG 59.257 38.462 0.00 0.00 0.00 4.41
156 157 6.205853 ACGAAAACAAGACCTATAAACATGCA 59.794 34.615 0.00 0.00 0.00 3.96
157 158 6.523201 CACGAAAACAAGACCTATAAACATGC 59.477 38.462 0.00 0.00 0.00 4.06
158 159 7.581476 ACACGAAAACAAGACCTATAAACATG 58.419 34.615 0.00 0.00 0.00 3.21
159 160 7.739498 ACACGAAAACAAGACCTATAAACAT 57.261 32.000 0.00 0.00 0.00 2.71
160 161 7.556733 AACACGAAAACAAGACCTATAAACA 57.443 32.000 0.00 0.00 0.00 2.83
161 162 7.911727 ACAAACACGAAAACAAGACCTATAAAC 59.088 33.333 0.00 0.00 0.00 2.01
162 163 7.987649 ACAAACACGAAAACAAGACCTATAAA 58.012 30.769 0.00 0.00 0.00 1.40
163 164 7.496591 AGACAAACACGAAAACAAGACCTATAA 59.503 33.333 0.00 0.00 0.00 0.98
164 165 6.987992 AGACAAACACGAAAACAAGACCTATA 59.012 34.615 0.00 0.00 0.00 1.31
165 166 5.820947 AGACAAACACGAAAACAAGACCTAT 59.179 36.000 0.00 0.00 0.00 2.57
166 167 5.180271 AGACAAACACGAAAACAAGACCTA 58.820 37.500 0.00 0.00 0.00 3.08
167 168 4.007659 AGACAAACACGAAAACAAGACCT 58.992 39.130 0.00 0.00 0.00 3.85
168 169 4.351131 AGACAAACACGAAAACAAGACC 57.649 40.909 0.00 0.00 0.00 3.85
169 170 4.490890 CGAAGACAAACACGAAAACAAGAC 59.509 41.667 0.00 0.00 0.00 3.01
170 171 4.389382 TCGAAGACAAACACGAAAACAAGA 59.611 37.500 0.00 0.00 0.00 3.02
171 172 4.643953 TCGAAGACAAACACGAAAACAAG 58.356 39.130 0.00 0.00 0.00 3.16
172 173 4.665281 TCGAAGACAAACACGAAAACAA 57.335 36.364 0.00 0.00 0.00 2.83
173 174 4.665281 TTCGAAGACAAACACGAAAACA 57.335 36.364 0.00 0.00 40.76 2.83
176 177 4.665281 TGTTTCGAAGACAAACACGAAA 57.335 36.364 0.00 0.00 46.91 3.46
177 178 4.868450 ATGTTTCGAAGACAAACACGAA 57.132 36.364 14.24 0.00 44.46 3.85
178 179 4.330347 TGAATGTTTCGAAGACAAACACGA 59.670 37.500 14.24 0.00 44.46 4.35
179 180 4.583426 TGAATGTTTCGAAGACAAACACG 58.417 39.130 14.24 0.00 44.46 4.49
180 181 5.971202 ACATGAATGTTTCGAAGACAAACAC 59.029 36.000 14.24 2.82 44.46 3.32
181 182 6.130298 ACATGAATGTTTCGAAGACAAACA 57.870 33.333 14.24 15.43 45.43 2.83
202 203 8.751335 GCGATTTTTATGAAAGTCTTCAAAACA 58.249 29.630 4.37 0.00 44.64 2.83
203 204 8.214472 GGCGATTTTTATGAAAGTCTTCAAAAC 58.786 33.333 4.37 0.00 44.64 2.43
204 205 8.141268 AGGCGATTTTTATGAAAGTCTTCAAAA 58.859 29.630 4.37 0.00 44.64 2.44
205 206 7.657336 AGGCGATTTTTATGAAAGTCTTCAAA 58.343 30.769 4.37 0.00 44.64 2.69
206 207 7.214467 AGGCGATTTTTATGAAAGTCTTCAA 57.786 32.000 4.37 0.00 44.64 2.69
207 208 6.817765 AGGCGATTTTTATGAAAGTCTTCA 57.182 33.333 4.37 0.00 45.53 3.02
208 209 9.439537 GAATAGGCGATTTTTATGAAAGTCTTC 57.560 33.333 4.37 0.00 31.44 2.87
209 210 8.956426 TGAATAGGCGATTTTTATGAAAGTCTT 58.044 29.630 4.37 0.00 31.44 3.01
210 211 8.398665 GTGAATAGGCGATTTTTATGAAAGTCT 58.601 33.333 4.37 0.00 31.44 3.24
211 212 7.644157 GGTGAATAGGCGATTTTTATGAAAGTC 59.356 37.037 0.00 0.00 0.00 3.01
212 213 7.416326 GGGTGAATAGGCGATTTTTATGAAAGT 60.416 37.037 0.00 0.00 0.00 2.66
213 214 6.918022 GGGTGAATAGGCGATTTTTATGAAAG 59.082 38.462 0.00 0.00 0.00 2.62
214 215 6.183360 GGGGTGAATAGGCGATTTTTATGAAA 60.183 38.462 0.00 0.00 0.00 2.69
215 216 5.300792 GGGGTGAATAGGCGATTTTTATGAA 59.699 40.000 0.00 0.00 0.00 2.57
216 217 4.825085 GGGGTGAATAGGCGATTTTTATGA 59.175 41.667 0.00 0.00 0.00 2.15
217 218 4.022329 GGGGGTGAATAGGCGATTTTTATG 60.022 45.833 0.00 0.00 0.00 1.90
218 219 4.149598 GGGGGTGAATAGGCGATTTTTAT 58.850 43.478 0.00 0.00 0.00 1.40
219 220 3.558033 GGGGGTGAATAGGCGATTTTTA 58.442 45.455 0.00 0.00 0.00 1.52
220 221 2.384828 GGGGGTGAATAGGCGATTTTT 58.615 47.619 0.00 0.00 0.00 1.94
221 222 2.067365 GGGGGTGAATAGGCGATTTT 57.933 50.000 0.00 0.00 0.00 1.82
222 223 3.821306 GGGGGTGAATAGGCGATTT 57.179 52.632 0.00 0.00 0.00 2.17
240 241 2.898472 CTAGAGGGGGTGGAGGGTGG 62.898 70.000 0.00 0.00 0.00 4.61
241 242 1.383248 CTAGAGGGGGTGGAGGGTG 60.383 68.421 0.00 0.00 0.00 4.61
242 243 1.867487 ACTAGAGGGGGTGGAGGGT 60.867 63.158 0.00 0.00 0.00 4.34
243 244 1.075151 GACTAGAGGGGGTGGAGGG 60.075 68.421 0.00 0.00 0.00 4.30
244 245 1.455959 CGACTAGAGGGGGTGGAGG 60.456 68.421 0.00 0.00 0.00 4.30
245 246 0.186386 ATCGACTAGAGGGGGTGGAG 59.814 60.000 0.00 0.00 0.00 3.86
246 247 1.526315 TATCGACTAGAGGGGGTGGA 58.474 55.000 0.00 0.00 0.00 4.02
247 248 1.962100 GTTATCGACTAGAGGGGGTGG 59.038 57.143 0.00 0.00 0.00 4.61
248 249 2.946785 AGTTATCGACTAGAGGGGGTG 58.053 52.381 0.00 0.00 36.65 4.61
257 258 6.376299 TCCTTGAAAGTGCTAGTTATCGACTA 59.624 38.462 0.00 0.00 39.86 2.59
258 259 5.185249 TCCTTGAAAGTGCTAGTTATCGACT 59.815 40.000 0.00 0.00 42.55 4.18
259 260 5.408356 TCCTTGAAAGTGCTAGTTATCGAC 58.592 41.667 0.00 0.00 0.00 4.20
260 261 5.654603 TCCTTGAAAGTGCTAGTTATCGA 57.345 39.130 0.00 0.00 0.00 3.59
261 262 5.220228 CGTTCCTTGAAAGTGCTAGTTATCG 60.220 44.000 0.00 0.00 0.00 2.92
262 263 5.867716 TCGTTCCTTGAAAGTGCTAGTTATC 59.132 40.000 0.00 0.00 0.00 1.75
263 264 5.790593 TCGTTCCTTGAAAGTGCTAGTTAT 58.209 37.500 0.00 0.00 0.00 1.89
264 265 5.204409 TCGTTCCTTGAAAGTGCTAGTTA 57.796 39.130 0.00 0.00 0.00 2.24
265 266 4.067972 TCGTTCCTTGAAAGTGCTAGTT 57.932 40.909 0.00 0.00 0.00 2.24
266 267 3.746045 TCGTTCCTTGAAAGTGCTAGT 57.254 42.857 0.00 0.00 0.00 2.57
267 268 3.433615 CCTTCGTTCCTTGAAAGTGCTAG 59.566 47.826 0.00 0.00 0.00 3.42
268 269 3.070446 TCCTTCGTTCCTTGAAAGTGCTA 59.930 43.478 0.00 0.00 0.00 3.49
269 270 2.158813 TCCTTCGTTCCTTGAAAGTGCT 60.159 45.455 0.00 0.00 0.00 4.40
270 271 2.218603 TCCTTCGTTCCTTGAAAGTGC 58.781 47.619 0.00 0.00 0.00 4.40
271 272 3.877508 ACTTCCTTCGTTCCTTGAAAGTG 59.122 43.478 0.00 0.00 0.00 3.16
272 273 4.152284 ACTTCCTTCGTTCCTTGAAAGT 57.848 40.909 0.00 0.00 0.00 2.66
273 274 5.298347 ACTACTTCCTTCGTTCCTTGAAAG 58.702 41.667 0.00 0.00 0.00 2.62
274 275 5.286267 ACTACTTCCTTCGTTCCTTGAAA 57.714 39.130 0.00 0.00 0.00 2.69
275 276 4.950205 ACTACTTCCTTCGTTCCTTGAA 57.050 40.909 0.00 0.00 0.00 2.69
276 277 6.096001 GGTATACTACTTCCTTCGTTCCTTGA 59.904 42.308 2.25 0.00 0.00 3.02
277 278 6.127535 TGGTATACTACTTCCTTCGTTCCTTG 60.128 42.308 2.25 0.00 0.00 3.61
278 279 5.954150 TGGTATACTACTTCCTTCGTTCCTT 59.046 40.000 2.25 0.00 0.00 3.36
279 280 5.513233 TGGTATACTACTTCCTTCGTTCCT 58.487 41.667 2.25 0.00 0.00 3.36
280 281 5.841957 TGGTATACTACTTCCTTCGTTCC 57.158 43.478 2.25 0.00 0.00 3.62
281 282 6.038985 GGTTGGTATACTACTTCCTTCGTTC 58.961 44.000 2.25 0.00 0.00 3.95
282 283 5.105187 GGGTTGGTATACTACTTCCTTCGTT 60.105 44.000 2.25 0.00 0.00 3.85
283 284 4.403752 GGGTTGGTATACTACTTCCTTCGT 59.596 45.833 2.25 0.00 0.00 3.85
284 285 4.648307 AGGGTTGGTATACTACTTCCTTCG 59.352 45.833 2.25 0.00 0.00 3.79
285 286 6.556974 AAGGGTTGGTATACTACTTCCTTC 57.443 41.667 2.25 0.00 0.00 3.46
286 287 8.634188 ATTAAGGGTTGGTATACTACTTCCTT 57.366 34.615 15.92 15.92 0.00 3.36
287 288 9.733907 TTATTAAGGGTTGGTATACTACTTCCT 57.266 33.333 2.25 1.09 0.00 3.36
291 292 9.842775 GCTTTTATTAAGGGTTGGTATACTACT 57.157 33.333 2.25 0.00 0.00 2.57
292 293 9.060347 GGCTTTTATTAAGGGTTGGTATACTAC 57.940 37.037 2.25 1.81 0.00 2.73
302 303 2.758423 CAGCCGGCTTTTATTAAGGGTT 59.242 45.455 30.60 0.00 0.00 4.11
303 304 2.375146 CAGCCGGCTTTTATTAAGGGT 58.625 47.619 30.60 0.00 0.00 4.34
312 313 2.100749 GCATATAAACCAGCCGGCTTTT 59.899 45.455 30.60 27.24 34.57 2.27
317 318 1.967319 AGTGCATATAAACCAGCCGG 58.033 50.000 0.00 0.00 38.77 6.13
319 320 3.744660 AGCTAGTGCATATAAACCAGCC 58.255 45.455 0.00 0.00 42.74 4.85
321 322 5.233988 GGAGAGCTAGTGCATATAAACCAG 58.766 45.833 0.00 0.00 42.74 4.00
352 353 3.126001 TCTTGTTGTCAGGCTTAGTGG 57.874 47.619 0.00 0.00 0.00 4.00
387 388 1.277579 TAGTGCACGGTATCCCCAAA 58.722 50.000 12.01 0.00 0.00 3.28
435 436 1.656818 CGAAAAGGCCGGATGCATGT 61.657 55.000 5.05 0.00 43.89 3.21
470 471 1.219124 GGCAGGCTCAATCAGACGA 59.781 57.895 0.00 0.00 33.76 4.20
471 472 0.674581 TTGGCAGGCTCAATCAGACG 60.675 55.000 0.00 0.00 33.76 4.18
487 490 0.678950 ACAATGGGCGAGGTTTTTGG 59.321 50.000 0.00 0.00 0.00 3.28
521 524 0.179156 GATGTTGTGGCTGCAATCCG 60.179 55.000 0.50 0.00 0.00 4.18
542 551 1.004044 AGACTTGGGCTGTGATCAAGG 59.996 52.381 0.00 0.00 41.35 3.61
1162 2226 3.650950 GGAGAGCTGGGCCCACAA 61.651 66.667 24.45 0.00 0.00 3.33
1219 2292 2.943978 CGAAGAAGCCCGTGGAGGT 61.944 63.158 0.00 0.00 38.74 3.85
1220 2293 2.125512 CGAAGAAGCCCGTGGAGG 60.126 66.667 0.00 0.00 40.63 4.30
1221 2294 2.815647 GCGAAGAAGCCCGTGGAG 60.816 66.667 0.00 0.00 0.00 3.86
1527 2841 1.584380 GAGCGACCACGTACCTGTCT 61.584 60.000 0.00 0.00 41.98 3.41
2001 3318 2.611224 CCAGAATTTGCACCTTTCAGGC 60.611 50.000 0.00 0.00 39.63 4.85
2031 3349 4.174129 GGCGGCAATGCACGGTAC 62.174 66.667 7.79 0.00 36.28 3.34
2139 3457 2.432510 CGGCTCTTTCTGGAAGATACCT 59.567 50.000 13.25 0.00 46.36 3.08
2747 4118 4.362279 TGCACAAGAGATTTCAAAGCAAC 58.638 39.130 0.00 0.00 0.00 4.17
2774 4145 1.256376 CGACAGAACATGACGCTATGC 59.744 52.381 0.00 0.00 40.00 3.14
2778 4149 2.163613 TGTATCGACAGAACATGACGCT 59.836 45.455 0.00 0.00 44.96 5.07
2781 4152 4.688879 TGGTTTGTATCGACAGAACATGAC 59.311 41.667 0.00 0.00 32.67 3.06
2789 4160 2.805671 TGCAGTTGGTTTGTATCGACAG 59.194 45.455 0.00 0.00 36.76 3.51
2801 4172 8.987890 GTATTTTCAAATACAAATGCAGTTGGT 58.012 29.630 28.40 16.98 46.25 3.67
2861 4232 8.691661 ATGAAACTCTACACAACAAATTAGGT 57.308 30.769 0.00 0.00 0.00 3.08
2863 4234 8.905702 GCAATGAAACTCTACACAACAAATTAG 58.094 33.333 0.00 0.00 0.00 1.73
2864 4235 7.865385 GGCAATGAAACTCTACACAACAAATTA 59.135 33.333 0.00 0.00 0.00 1.40
2867 4238 5.587289 GGCAATGAAACTCTACACAACAAA 58.413 37.500 0.00 0.00 0.00 2.83
2868 4239 4.260990 CGGCAATGAAACTCTACACAACAA 60.261 41.667 0.00 0.00 0.00 2.83
2899 4270 3.436700 TCAGCGGTGTATGACAGTATG 57.563 47.619 15.22 0.00 46.00 2.39
2900 4271 4.465632 TTTCAGCGGTGTATGACAGTAT 57.534 40.909 15.22 0.00 0.00 2.12
2901 4272 3.945981 TTTCAGCGGTGTATGACAGTA 57.054 42.857 15.22 0.00 0.00 2.74
2902 4273 2.831685 TTTCAGCGGTGTATGACAGT 57.168 45.000 15.22 0.00 0.00 3.55
2903 4274 5.794687 TTTATTTCAGCGGTGTATGACAG 57.205 39.130 15.22 0.00 0.00 3.51
2904 4275 6.372937 TCAATTTATTTCAGCGGTGTATGACA 59.627 34.615 15.22 0.00 0.00 3.58
2905 4276 6.687105 GTCAATTTATTTCAGCGGTGTATGAC 59.313 38.462 15.22 10.51 0.00 3.06
2906 4277 6.183360 GGTCAATTTATTTCAGCGGTGTATGA 60.183 38.462 15.22 1.77 0.00 2.15
2947 4318 5.403466 CAGTGCTGCAATCTTAAAGGAAAAC 59.597 40.000 2.77 0.00 0.00 2.43
2976 4348 4.088634 TCTAGCAATGCCAAATTCCACTT 58.911 39.130 0.00 0.00 0.00 3.16
3121 4493 8.474710 TGTTCCTTAGTTACAGTAAGAGTTCT 57.525 34.615 0.00 0.00 33.91 3.01
3149 4521 6.662414 TGACAAAGAACAAAGACAGTAGTG 57.338 37.500 0.00 0.00 0.00 2.74
3276 4650 4.651503 ACTAGGTGATAATCAGACCCTGTG 59.348 45.833 0.00 0.00 32.61 3.66
3391 5210 9.193133 CACGGATACTTTAGGTTATATGAACTG 57.807 37.037 0.00 0.00 0.00 3.16
3479 6449 0.112218 TATGCACCAACCAGGCAAGT 59.888 50.000 0.00 0.00 43.14 3.16
3505 6475 1.302993 AATACAGTTTGGCGGCCGT 60.303 52.632 28.70 6.42 0.00 5.68
3510 6480 8.612619 AGAAAATATACTCAATACAGTTTGGCG 58.387 33.333 0.00 0.00 0.00 5.69
3612 6582 6.849502 AGACAATGCTTCATCATAACAACTG 58.150 36.000 0.00 0.00 0.00 3.16
3613 6583 7.362401 GGAAGACAATGCTTCATCATAACAACT 60.362 37.037 15.44 0.00 44.71 3.16
3628 6598 6.976925 CCTTTCAGAATAATGGAAGACAATGC 59.023 38.462 0.00 0.00 37.93 3.56
3653 6623 3.242739 ACGCAAGATCAGTTTGTGACAAC 60.243 43.478 12.22 0.00 38.55 3.32
3656 6626 2.543848 TCACGCAAGATCAGTTTGTGAC 59.456 45.455 12.22 0.00 38.55 3.67
3676 6646 6.116126 AGGTAGAAATAGCATGGTTCACTTC 58.884 40.000 1.12 1.58 0.00 3.01
3874 6845 5.109903 CAAAGTATTTCGGTACAGAGGGAG 58.890 45.833 0.00 0.00 35.03 4.30
3875 6846 4.529377 ACAAAGTATTTCGGTACAGAGGGA 59.471 41.667 0.00 0.00 35.03 4.20
3876 6847 4.828829 ACAAAGTATTTCGGTACAGAGGG 58.171 43.478 0.00 0.00 35.03 4.30
3877 6848 6.628185 ACTACAAAGTATTTCGGTACAGAGG 58.372 40.000 0.00 0.00 35.03 3.69
3878 6849 9.286946 CTAACTACAAAGTATTTCGGTACAGAG 57.713 37.037 0.00 0.00 35.03 3.35
3879 6850 8.246180 CCTAACTACAAAGTATTTCGGTACAGA 58.754 37.037 0.00 0.00 35.03 3.41
3880 6851 7.490402 CCCTAACTACAAAGTATTTCGGTACAG 59.510 40.741 0.00 0.00 35.03 2.74
3881 6852 7.178274 TCCCTAACTACAAAGTATTTCGGTACA 59.822 37.037 0.00 0.00 35.03 2.90
3882 6853 7.547227 TCCCTAACTACAAAGTATTTCGGTAC 58.453 38.462 0.00 0.00 35.03 3.34
3883 6854 7.716799 TCCCTAACTACAAAGTATTTCGGTA 57.283 36.000 0.00 0.00 35.03 4.02
3884 6855 6.610075 TCCCTAACTACAAAGTATTTCGGT 57.390 37.500 0.00 0.00 35.03 4.69
3885 6856 7.413767 GCTTTCCCTAACTACAAAGTATTTCGG 60.414 40.741 0.00 0.00 35.03 4.30
3886 6857 7.333672 AGCTTTCCCTAACTACAAAGTATTTCG 59.666 37.037 0.00 0.00 35.03 3.46
3887 6858 8.563123 AGCTTTCCCTAACTACAAAGTATTTC 57.437 34.615 0.00 0.00 35.03 2.17
3888 6859 9.668497 CTAGCTTTCCCTAACTACAAAGTATTT 57.332 33.333 0.00 0.00 40.26 1.40
3889 6860 8.823794 ACTAGCTTTCCCTAACTACAAAGTATT 58.176 33.333 0.00 0.00 33.75 1.89
3890 6861 8.376803 ACTAGCTTTCCCTAACTACAAAGTAT 57.623 34.615 0.00 0.00 33.75 2.12
3891 6862 7.787623 ACTAGCTTTCCCTAACTACAAAGTA 57.212 36.000 0.00 0.00 33.75 2.24
3892 6863 6.683312 ACTAGCTTTCCCTAACTACAAAGT 57.317 37.500 0.00 0.00 37.65 2.66
3893 6864 7.609056 TGTACTAGCTTTCCCTAACTACAAAG 58.391 38.462 0.00 0.00 0.00 2.77
3894 6865 7.543359 TGTACTAGCTTTCCCTAACTACAAA 57.457 36.000 0.00 0.00 0.00 2.83
3895 6866 7.543359 TTGTACTAGCTTTCCCTAACTACAA 57.457 36.000 0.00 0.00 0.00 2.41
3896 6867 6.350780 GCTTGTACTAGCTTTCCCTAACTACA 60.351 42.308 20.15 0.00 38.15 2.74
3897 6868 6.041511 GCTTGTACTAGCTTTCCCTAACTAC 58.958 44.000 20.15 0.00 38.15 2.73
3898 6869 5.128335 GGCTTGTACTAGCTTTCCCTAACTA 59.872 44.000 24.97 0.00 40.99 2.24
3899 6870 4.081031 GGCTTGTACTAGCTTTCCCTAACT 60.081 45.833 24.97 0.00 40.99 2.24
3900 6871 4.190001 GGCTTGTACTAGCTTTCCCTAAC 58.810 47.826 24.97 5.22 40.99 2.34
3901 6872 3.199289 GGGCTTGTACTAGCTTTCCCTAA 59.801 47.826 24.97 0.00 40.99 2.69
3902 6873 2.770232 GGGCTTGTACTAGCTTTCCCTA 59.230 50.000 24.97 0.00 40.99 3.53
3903 6874 1.560146 GGGCTTGTACTAGCTTTCCCT 59.440 52.381 24.97 0.00 40.99 4.20
3904 6875 1.408405 GGGGCTTGTACTAGCTTTCCC 60.408 57.143 24.97 22.40 40.99 3.97
3905 6876 1.408405 GGGGGCTTGTACTAGCTTTCC 60.408 57.143 24.97 21.77 40.99 3.13
3906 6877 2.039818 GGGGGCTTGTACTAGCTTTC 57.960 55.000 24.97 15.81 40.99 2.62
3922 6893 2.298729 CCACAATACTTGTTGTTGGGGG 59.701 50.000 10.22 5.31 44.41 5.40
3923 6894 3.658757 CCACAATACTTGTTGTTGGGG 57.341 47.619 5.79 5.79 42.93 4.96
3924 6895 4.580995 TGTACCACAATACTTGTTGTTGGG 59.419 41.667 2.59 0.00 43.23 4.12
3925 6896 5.529430 TCTGTACCACAATACTTGTTGTTGG 59.471 40.000 2.59 0.00 43.23 3.77
3926 6897 6.293407 CCTCTGTACCACAATACTTGTTGTTG 60.293 42.308 2.59 0.00 43.23 3.33
3927 6898 5.763204 CCTCTGTACCACAATACTTGTTGTT 59.237 40.000 2.59 0.00 43.23 2.83
3928 6899 5.305585 CCTCTGTACCACAATACTTGTTGT 58.694 41.667 2.82 2.82 43.23 3.32
3929 6900 4.695455 CCCTCTGTACCACAATACTTGTTG 59.305 45.833 0.00 0.00 43.23 3.33
3930 6901 4.595781 TCCCTCTGTACCACAATACTTGTT 59.404 41.667 0.00 0.00 43.23 2.83
3931 6902 4.164981 TCCCTCTGTACCACAATACTTGT 58.835 43.478 0.00 0.00 46.75 3.16
3932 6903 4.223032 ACTCCCTCTGTACCACAATACTTG 59.777 45.833 0.00 0.00 0.00 3.16
3933 6904 4.426704 ACTCCCTCTGTACCACAATACTT 58.573 43.478 0.00 0.00 0.00 2.24
3934 6905 4.062490 ACTCCCTCTGTACCACAATACT 57.938 45.455 0.00 0.00 0.00 2.12
3935 6906 7.778185 ATATACTCCCTCTGTACCACAATAC 57.222 40.000 0.00 0.00 0.00 1.89
3937 6908 8.974292 AATATATACTCCCTCTGTACCACAAT 57.026 34.615 0.00 0.00 0.00 2.71
3938 6909 8.647796 CAAATATATACTCCCTCTGTACCACAA 58.352 37.037 0.00 0.00 0.00 3.33
3939 6910 7.234782 CCAAATATATACTCCCTCTGTACCACA 59.765 40.741 0.00 0.00 0.00 4.17
3940 6911 7.612677 CCAAATATATACTCCCTCTGTACCAC 58.387 42.308 0.00 0.00 0.00 4.16
3941 6912 6.212791 GCCAAATATATACTCCCTCTGTACCA 59.787 42.308 0.00 0.00 0.00 3.25
3942 6913 6.440965 AGCCAAATATATACTCCCTCTGTACC 59.559 42.308 0.00 0.00 0.00 3.34
3943 6914 7.178628 TGAGCCAAATATATACTCCCTCTGTAC 59.821 40.741 0.00 0.00 0.00 2.90
3944 6915 7.246027 TGAGCCAAATATATACTCCCTCTGTA 58.754 38.462 0.00 0.00 0.00 2.74
3945 6916 6.084738 TGAGCCAAATATATACTCCCTCTGT 58.915 40.000 0.00 0.00 0.00 3.41
3946 6917 6.611613 TGAGCCAAATATATACTCCCTCTG 57.388 41.667 0.00 0.00 0.00 3.35
3947 6918 7.633018 TTTGAGCCAAATATATACTCCCTCT 57.367 36.000 0.00 0.00 0.00 3.69
3948 6919 8.691661 TTTTTGAGCCAAATATATACTCCCTC 57.308 34.615 1.89 0.00 33.19 4.30
3949 6920 8.502738 TCTTTTTGAGCCAAATATATACTCCCT 58.497 33.333 1.89 0.00 33.19 4.20
3950 6921 8.691661 TCTTTTTGAGCCAAATATATACTCCC 57.308 34.615 1.89 0.00 33.19 4.30
3963 6934 5.867903 TTTCTCCATTTCTTTTTGAGCCA 57.132 34.783 0.00 0.00 0.00 4.75
4082 7055 2.254546 AAACATGAACGTGAGGCTCA 57.745 45.000 14.43 14.43 0.00 4.26
4095 7068 3.573598 TGCAAAGCGGATTGTAAACATG 58.426 40.909 0.00 0.00 32.80 3.21
4184 7157 2.887152 CCCAAAACAGGAGTTCAGGAAG 59.113 50.000 0.00 0.00 36.84 3.46
4197 7170 1.062121 TCCCAACATTCCCCCAAAACA 60.062 47.619 0.00 0.00 0.00 2.83
4210 7184 2.763448 CAAACCCAAAGTTCTCCCAACA 59.237 45.455 0.00 0.00 37.88 3.33
4212 7186 3.028130 GACAAACCCAAAGTTCTCCCAA 58.972 45.455 0.00 0.00 37.88 4.12
4215 7189 2.623416 CCTGACAAACCCAAAGTTCTCC 59.377 50.000 0.00 0.00 37.88 3.71
4221 7195 2.224042 GGAAAGCCTGACAAACCCAAAG 60.224 50.000 0.00 0.00 0.00 2.77
4241 7215 1.365633 GTAGAGGAGGCGCATCAGG 59.634 63.158 24.79 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.