Multiple sequence alignment - TraesCS1B01G301600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G301600 chr1B 100.000 7272 0 0 1 7272 522062320 522055049 0.000000e+00 13429.0
1 TraesCS1B01G301600 chr1B 93.373 166 10 1 5282 5447 10372169 10372005 2.030000e-60 244.0
2 TraesCS1B01G301600 chr1B 91.176 170 14 1 5282 5451 667834379 667834547 5.670000e-56 230.0
3 TraesCS1B01G301600 chr1B 90.643 171 16 0 5286 5456 488538938 488539108 2.040000e-55 228.0
4 TraesCS1B01G301600 chr1A 94.349 4760 170 34 547 5265 487742087 487737386 0.000000e+00 7208.0
5 TraesCS1B01G301600 chr1A 93.047 1697 67 15 5446 7131 487737270 487735614 0.000000e+00 2433.0
6 TraesCS1B01G301600 chr1A 87.833 263 14 11 277 525 487743715 487743457 7.140000e-75 292.0
7 TraesCS1B01G301600 chr1D 93.505 4788 208 40 547 5287 388651725 388646994 0.000000e+00 7023.0
8 TraesCS1B01G301600 chr1D 93.463 1698 86 14 5446 7131 388646995 388645311 0.000000e+00 2497.0
9 TraesCS1B01G301600 chr1D 91.064 470 33 4 2078 2546 84009546 84010007 1.720000e-175 627.0
10 TraesCS1B01G301600 chr1D 81.735 438 25 27 106 514 388653936 388653525 1.520000e-81 315.0
11 TraesCS1B01G301600 chr1D 86.170 94 11 1 7132 7223 42391804 42391711 4.640000e-17 100.0
12 TraesCS1B01G301600 chr5D 92.165 702 41 6 1849 2546 54190774 54190083 0.000000e+00 979.0
13 TraesCS1B01G301600 chr3A 88.679 742 72 9 954 1690 599860934 599861668 0.000000e+00 894.0
14 TraesCS1B01G301600 chr3A 81.234 389 63 9 1302 1685 579553138 579553521 9.170000e-79 305.0
15 TraesCS1B01G301600 chr3A 94.048 168 9 1 5281 5447 197436149 197436316 3.370000e-63 254.0
16 TraesCS1B01G301600 chr3A 78.333 420 68 19 4618 5022 599864388 599864799 4.360000e-62 250.0
17 TraesCS1B01G301600 chr3A 76.533 473 81 17 5796 6256 599866344 599866798 1.580000e-56 231.0
18 TraesCS1B01G301600 chr3D 87.135 754 59 22 954 1695 457018659 457019386 0.000000e+00 821.0
19 TraesCS1B01G301600 chr3D 80.720 389 65 9 1302 1685 439838885 439839268 1.980000e-75 294.0
20 TraesCS1B01G301600 chr3D 88.889 189 16 5 5286 5470 238999575 238999388 2.040000e-55 228.0
21 TraesCS1B01G301600 chr3B 85.604 778 78 19 929 1695 603601517 603602271 0.000000e+00 785.0
22 TraesCS1B01G301600 chr3B 80.977 389 64 9 1302 1685 576657676 576658059 4.260000e-77 300.0
23 TraesCS1B01G301600 chr3B 90.761 184 14 3 5286 5467 651729626 651729444 7.290000e-60 243.0
24 TraesCS1B01G301600 chr3B 91.228 171 13 2 5285 5455 252358607 252358439 1.580000e-56 231.0
25 TraesCS1B01G301600 chr3B 89.231 130 12 2 4618 4746 603605237 603605365 2.100000e-35 161.0
26 TraesCS1B01G301600 chr7D 90.283 494 37 5 1846 2338 85520227 85520710 2.860000e-178 636.0
27 TraesCS1B01G301600 chr7D 90.678 472 33 5 2078 2546 628448028 628448491 1.040000e-172 617.0
28 TraesCS1B01G301600 chr7D 88.934 497 41 6 1849 2341 621938198 621937712 1.040000e-167 601.0
29 TraesCS1B01G301600 chr7D 90.116 172 17 0 5283 5454 184831276 184831105 2.640000e-54 224.0
30 TraesCS1B01G301600 chr6D 90.283 494 37 5 1849 2341 65146045 65146528 2.860000e-178 636.0
31 TraesCS1B01G301600 chr6D 89.714 175 17 1 5286 5460 394588758 394588585 9.500000e-54 222.0
32 TraesCS1B01G301600 chr6D 87.500 96 11 1 7133 7227 41237291 41237196 7.710000e-20 110.0
33 TraesCS1B01G301600 chrUn 89.474 494 41 5 1849 2341 31511883 31511400 1.340000e-171 614.0
34 TraesCS1B01G301600 chrUn 95.102 245 12 0 2302 2546 178468027 178467783 3.180000e-103 387.0
35 TraesCS1B01G301600 chr4B 89.641 473 37 6 2078 2546 659732929 659732465 6.280000e-165 592.0
36 TraesCS1B01G301600 chr4B 95.102 245 12 0 2302 2546 636627021 636627265 3.180000e-103 387.0
37 TraesCS1B01G301600 chr6B 88.352 455 32 8 1849 2287 619067158 619066709 1.800000e-145 527.0
38 TraesCS1B01G301600 chr6B 89.412 85 9 0 7133 7217 198224140 198224056 2.770000e-19 108.0
39 TraesCS1B01G301600 chr5B 87.773 458 35 8 1846 2287 674913931 674914383 3.890000e-142 516.0
40 TraesCS1B01G301600 chr5B 93.491 169 10 1 5283 5451 677663552 677663719 4.360000e-62 250.0
41 TraesCS1B01G301600 chr5B 93.333 165 10 1 5283 5447 405526492 405526329 7.290000e-60 243.0
42 TraesCS1B01G301600 chr2B 87.912 455 34 8 1849 2287 23656545 23656096 3.890000e-142 516.0
43 TraesCS1B01G301600 chr2B 95.102 245 12 0 2302 2546 30217594 30217838 3.180000e-103 387.0
44 TraesCS1B01G301600 chr7B 87.692 455 35 8 1849 2287 540128439 540127990 1.810000e-140 510.0
45 TraesCS1B01G301600 chr7B 89.444 180 13 5 5283 5457 516791928 516791750 9.500000e-54 222.0
46 TraesCS1B01G301600 chr2D 83.188 345 54 3 1222 1564 161376696 161376354 5.480000e-81 313.0
47 TraesCS1B01G301600 chr2D 92.814 167 12 0 5283 5449 445733668 445733834 7.290000e-60 243.0
48 TraesCS1B01G301600 chr2A 95.152 165 8 0 5286 5450 608038751 608038587 2.010000e-65 261.0
49 TraesCS1B01G301600 chr2A 76.231 467 90 18 1229 1684 662905413 662905869 2.040000e-55 228.0
50 TraesCS1B01G301600 chr2A 90.643 171 15 1 5286 5456 700986074 700986243 7.340000e-55 226.0
51 TraesCS1B01G301600 chr2A 85.417 96 14 0 7123 7218 3793117 3793022 4.640000e-17 100.0
52 TraesCS1B01G301600 chr2A 86.170 94 11 2 7133 7224 202889824 202889731 4.640000e-17 100.0
53 TraesCS1B01G301600 chr4A 94.444 162 9 0 5286 5447 199801271 199801110 4.360000e-62 250.0
54 TraesCS1B01G301600 chr6A 87.500 96 11 1 7133 7227 51882712 51882617 7.710000e-20 110.0
55 TraesCS1B01G301600 chr5A 88.372 86 10 0 7132 7217 32836512 32836427 3.590000e-18 104.0
56 TraesCS1B01G301600 chr4D 87.097 93 11 1 7130 7221 498045273 498045181 3.590000e-18 104.0
57 TraesCS1B01G301600 chr4D 83.019 106 16 2 7119 7223 423945412 423945308 2.160000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G301600 chr1B 522055049 522062320 7271 True 13429.000000 13429 100.000000 1 7272 1 chr1B.!!$R2 7271
1 TraesCS1B01G301600 chr1A 487735614 487743715 8101 True 3311.000000 7208 91.743000 277 7131 3 chr1A.!!$R1 6854
2 TraesCS1B01G301600 chr1D 388645311 388653936 8625 True 3278.333333 7023 89.567667 106 7131 3 chr1D.!!$R2 7025
3 TraesCS1B01G301600 chr5D 54190083 54190774 691 True 979.000000 979 92.165000 1849 2546 1 chr5D.!!$R1 697
4 TraesCS1B01G301600 chr3A 599860934 599866798 5864 False 458.333333 894 81.181667 954 6256 3 chr3A.!!$F3 5302
5 TraesCS1B01G301600 chr3D 457018659 457019386 727 False 821.000000 821 87.135000 954 1695 1 chr3D.!!$F2 741
6 TraesCS1B01G301600 chr3B 603601517 603605365 3848 False 473.000000 785 87.417500 929 4746 2 chr3B.!!$F2 3817

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
271 295 0.250295 TTTCTCCCAAGCGACACAGG 60.250 55.000 0.00 0.00 0.00 4.00 F
379 409 0.516877 CCAAGCATCGCGTTCTTCAA 59.483 50.000 5.77 0.00 0.00 2.69 F
856 3990 0.536233 CCGCTCTGCCTCTCTAGCTA 60.536 60.000 0.00 0.00 32.73 3.32 F
858 3992 0.598065 GCTCTGCCTCTCTAGCTAGC 59.402 60.000 16.35 6.62 34.45 3.42 F
2003 5188 0.674895 GGTTGTGCTGCTAGTCCAGG 60.675 60.000 0.00 0.00 33.44 4.45 F
2048 5233 0.895100 TCACTTGCTGGTTCATGGGC 60.895 55.000 0.00 0.00 0.00 5.36 F
3009 7133 1.439353 AACACGTGTCCTTGCAGCAG 61.439 55.000 23.61 0.00 0.00 4.24 F
3865 8167 1.911357 AGATCACTGGACCATTCTGCA 59.089 47.619 0.00 0.00 0.00 4.41 F
4171 9254 2.505819 AGGGTGCCGAGAGTAAAATGAT 59.494 45.455 0.00 0.00 0.00 2.45 F
4245 9328 2.618241 TGTCTGGCATGAAACACAGTTC 59.382 45.455 0.00 0.00 32.92 3.01 F
5982 12134 1.073923 GAGGATGGGGCGGTTGATATT 59.926 52.381 0.00 0.00 0.00 1.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1843 5025 1.067846 AGTCAGATTACGCAAGCACGA 60.068 47.619 0.00 0.0 45.62 4.35 R
1985 5170 1.301677 GCCTGGACTAGCAGCACAAC 61.302 60.000 0.00 0.0 0.00 3.32 R
2620 6744 0.322456 CGAGCAAGGGTGGGAATTCA 60.322 55.000 7.93 0.0 0.00 2.57 R
2688 6812 2.283298 AGCAAGATCAGTATGGCAACG 58.717 47.619 0.00 0.0 42.51 4.10 R
3478 7604 1.227263 CATGGTAAGACCGGGCGAG 60.227 63.158 6.32 0.0 42.58 5.03 R
3818 8119 2.831685 ATCAGACTACACGTTGCCAA 57.168 45.000 0.00 0.0 0.00 4.52 R
4148 9231 1.344065 TTTTACTCTCGGCACCCTCA 58.656 50.000 0.00 0.0 0.00 3.86 R
5627 10915 1.822425 TGAACCTTAAGTGACCCCCA 58.178 50.000 0.97 0.0 0.00 4.96 R
5922 12074 1.136305 TCCTCAGGCTCGATAAAACCG 59.864 52.381 0.00 0.0 0.00 4.44 R
6166 12318 1.597854 CTTTCGCCAGTCTGTGCCA 60.598 57.895 0.00 0.0 0.00 4.92 R
7227 13403 0.329261 TTCTCCATTGGTCCAGCCTG 59.671 55.000 1.86 0.0 38.35 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.589958 CGAAGCTAAGGGTATATGGATATCT 57.410 40.000 2.05 0.00 0.00 1.98
33 34 8.012957 CGAAGCTAAGGGTATATGGATATCTT 57.987 38.462 2.05 0.00 0.00 2.40
34 35 7.923344 CGAAGCTAAGGGTATATGGATATCTTG 59.077 40.741 2.05 0.00 0.00 3.02
35 36 8.686739 AAGCTAAGGGTATATGGATATCTTGT 57.313 34.615 2.05 0.00 0.00 3.16
36 37 9.784376 AAGCTAAGGGTATATGGATATCTTGTA 57.216 33.333 2.05 0.00 0.00 2.41
37 38 9.427821 AGCTAAGGGTATATGGATATCTTGTAG 57.572 37.037 2.05 0.00 0.00 2.74
38 39 9.203163 GCTAAGGGTATATGGATATCTTGTAGT 57.797 37.037 2.05 0.00 0.00 2.73
42 43 9.924010 AGGGTATATGGATATCTTGTAGTACTC 57.076 37.037 0.00 0.00 0.00 2.59
43 44 9.924010 GGGTATATGGATATCTTGTAGTACTCT 57.076 37.037 0.00 0.00 0.00 3.24
50 51 9.862149 TGGATATCTTGTAGTACTCTGTAATCA 57.138 33.333 0.00 0.00 0.00 2.57
56 57 9.408648 TCTTGTAGTACTCTGTAATCATGATGA 57.591 33.333 9.46 0.00 0.00 2.92
62 63 9.579932 AGTACTCTGTAATCATGATGATAGTGA 57.420 33.333 20.02 9.70 35.76 3.41
65 66 9.539825 ACTCTGTAATCATGATGATAGTGAAAC 57.460 33.333 20.02 2.05 35.76 2.78
66 67 9.538508 CTCTGTAATCATGATGATAGTGAAACA 57.461 33.333 14.68 6.05 35.87 2.83
72 73 9.570468 AATCATGATGATAGTGAAACATAGCTT 57.430 29.630 9.46 0.00 35.87 3.74
73 74 8.969260 TCATGATGATAGTGAAACATAGCTTT 57.031 30.769 0.00 0.00 41.43 3.51
74 75 8.833493 TCATGATGATAGTGAAACATAGCTTTG 58.167 33.333 2.27 2.27 41.43 2.77
75 76 8.833493 CATGATGATAGTGAAACATAGCTTTGA 58.167 33.333 11.39 0.00 41.43 2.69
76 77 8.969260 TGATGATAGTGAAACATAGCTTTGAT 57.031 30.769 11.39 0.00 41.43 2.57
77 78 8.833493 TGATGATAGTGAAACATAGCTTTGATG 58.167 33.333 11.39 2.10 41.43 3.07
78 79 8.743085 ATGATAGTGAAACATAGCTTTGATGT 57.257 30.769 11.39 2.80 41.43 3.06
79 80 8.565896 TGATAGTGAAACATAGCTTTGATGTT 57.434 30.769 11.39 9.21 46.89 2.71
80 81 8.453320 TGATAGTGAAACATAGCTTTGATGTTG 58.547 33.333 12.87 0.00 44.75 3.33
81 82 6.017400 AGTGAAACATAGCTTTGATGTTGG 57.983 37.500 12.87 0.00 44.75 3.77
82 83 5.769662 AGTGAAACATAGCTTTGATGTTGGA 59.230 36.000 12.87 2.18 44.75 3.53
83 84 6.435277 AGTGAAACATAGCTTTGATGTTGGAT 59.565 34.615 12.87 0.00 44.75 3.41
84 85 6.529125 GTGAAACATAGCTTTGATGTTGGATG 59.471 38.462 12.87 0.00 44.75 3.51
85 86 6.433716 TGAAACATAGCTTTGATGTTGGATGA 59.566 34.615 12.87 0.00 44.75 2.92
86 87 6.839124 AACATAGCTTTGATGTTGGATGAA 57.161 33.333 11.39 0.00 44.03 2.57
87 88 6.839124 ACATAGCTTTGATGTTGGATGAAA 57.161 33.333 11.39 0.00 33.70 2.69
88 89 7.414222 ACATAGCTTTGATGTTGGATGAAAT 57.586 32.000 11.39 0.00 33.70 2.17
89 90 8.523915 ACATAGCTTTGATGTTGGATGAAATA 57.476 30.769 11.39 0.00 33.70 1.40
90 91 8.970020 ACATAGCTTTGATGTTGGATGAAATAA 58.030 29.630 11.39 0.00 33.70 1.40
91 92 9.806203 CATAGCTTTGATGTTGGATGAAATAAA 57.194 29.630 0.00 0.00 0.00 1.40
92 93 9.807649 ATAGCTTTGATGTTGGATGAAATAAAC 57.192 29.630 0.00 0.00 0.00 2.01
93 94 7.099120 AGCTTTGATGTTGGATGAAATAAACC 58.901 34.615 0.00 0.00 0.00 3.27
94 95 6.873076 GCTTTGATGTTGGATGAAATAAACCA 59.127 34.615 0.00 0.00 0.00 3.67
95 96 7.550196 GCTTTGATGTTGGATGAAATAAACCAT 59.450 33.333 0.00 0.00 32.31 3.55
96 97 9.439500 CTTTGATGTTGGATGAAATAAACCATT 57.561 29.630 0.00 0.00 32.31 3.16
97 98 8.774890 TTGATGTTGGATGAAATAAACCATTG 57.225 30.769 0.00 0.00 32.31 2.82
98 99 7.329499 TGATGTTGGATGAAATAAACCATTGG 58.671 34.615 0.00 0.00 32.31 3.16
99 100 6.924913 TGTTGGATGAAATAAACCATTGGA 57.075 33.333 10.37 0.00 32.31 3.53
100 101 6.696411 TGTTGGATGAAATAAACCATTGGAC 58.304 36.000 10.37 0.00 32.31 4.02
101 102 6.268617 TGTTGGATGAAATAAACCATTGGACA 59.731 34.615 10.37 0.00 32.31 4.02
102 103 6.279513 TGGATGAAATAAACCATTGGACAC 57.720 37.500 10.37 0.00 0.00 3.67
103 104 5.777223 TGGATGAAATAAACCATTGGACACA 59.223 36.000 10.37 0.50 0.00 3.72
104 105 6.440010 TGGATGAAATAAACCATTGGACACAT 59.560 34.615 10.37 5.10 0.00 3.21
105 106 6.980397 GGATGAAATAAACCATTGGACACATC 59.020 38.462 10.37 12.46 0.00 3.06
106 107 7.147846 GGATGAAATAAACCATTGGACACATCT 60.148 37.037 10.37 0.00 32.70 2.90
107 108 7.537596 TGAAATAAACCATTGGACACATCTT 57.462 32.000 10.37 0.00 0.00 2.40
108 109 7.961351 TGAAATAAACCATTGGACACATCTTT 58.039 30.769 10.37 0.10 0.00 2.52
109 110 8.428063 TGAAATAAACCATTGGACACATCTTTT 58.572 29.630 10.37 0.00 0.00 2.27
110 111 9.921637 GAAATAAACCATTGGACACATCTTTTA 57.078 29.630 10.37 1.75 0.00 1.52
151 153 9.612620 CACTCCTACAACAAATTCATCTTTTAC 57.387 33.333 0.00 0.00 0.00 2.01
153 155 7.302524 TCCTACAACAAATTCATCTTTTACGC 58.697 34.615 0.00 0.00 0.00 4.42
162 164 3.840468 TCATCTTTTACGCGCAGTCTAA 58.160 40.909 5.73 0.00 0.00 2.10
163 165 3.611113 TCATCTTTTACGCGCAGTCTAAC 59.389 43.478 5.73 0.00 0.00 2.34
165 167 2.063266 CTTTTACGCGCAGTCTAACCA 58.937 47.619 5.73 0.00 0.00 3.67
179 181 6.568653 GCAGTCTAACCATCTCCTTTGTTTTC 60.569 42.308 0.00 0.00 0.00 2.29
180 182 6.712547 CAGTCTAACCATCTCCTTTGTTTTCT 59.287 38.462 0.00 0.00 0.00 2.52
181 183 6.937465 AGTCTAACCATCTCCTTTGTTTTCTC 59.063 38.462 0.00 0.00 0.00 2.87
227 229 8.575589 TGTATTTCTGTTCATTAGTTGCATGTT 58.424 29.630 0.00 0.00 0.00 2.71
253 277 2.817258 TCATTCCCGCGTTCAAGATTTT 59.183 40.909 4.92 0.00 0.00 1.82
255 279 2.981400 TCCCGCGTTCAAGATTTTTC 57.019 45.000 4.92 0.00 0.00 2.29
257 281 2.482721 TCCCGCGTTCAAGATTTTTCTC 59.517 45.455 4.92 0.00 0.00 2.87
258 282 2.414161 CCCGCGTTCAAGATTTTTCTCC 60.414 50.000 4.92 0.00 0.00 3.71
259 283 2.414161 CCGCGTTCAAGATTTTTCTCCC 60.414 50.000 4.92 0.00 0.00 4.30
260 284 2.225491 CGCGTTCAAGATTTTTCTCCCA 59.775 45.455 0.00 0.00 0.00 4.37
261 285 3.304391 CGCGTTCAAGATTTTTCTCCCAA 60.304 43.478 0.00 0.00 0.00 4.12
263 287 4.229876 CGTTCAAGATTTTTCTCCCAAGC 58.770 43.478 0.00 0.00 0.00 4.01
265 289 3.750371 TCAAGATTTTTCTCCCAAGCGA 58.250 40.909 0.00 0.00 0.00 4.93
266 290 3.502211 TCAAGATTTTTCTCCCAAGCGAC 59.498 43.478 0.00 0.00 0.00 5.19
267 291 3.140325 AGATTTTTCTCCCAAGCGACA 57.860 42.857 0.00 0.00 0.00 4.35
270 294 1.593196 TTTTCTCCCAAGCGACACAG 58.407 50.000 0.00 0.00 0.00 3.66
271 295 0.250295 TTTCTCCCAAGCGACACAGG 60.250 55.000 0.00 0.00 0.00 4.00
296 322 4.260784 GCCGATTCCACTGTCATTGATAAC 60.261 45.833 0.00 0.00 0.00 1.89
298 324 4.025730 CGATTCCACTGTCATTGATAACGG 60.026 45.833 0.00 0.00 0.00 4.44
312 340 8.095792 TCATTGATAACGGAACAAAAGGTACTA 58.904 33.333 0.00 0.00 38.49 1.82
369 399 6.618287 TCAGGATTTAATAACCAAGCATCG 57.382 37.500 0.00 0.00 0.00 3.84
373 403 4.688511 TTTAATAACCAAGCATCGCGTT 57.311 36.364 5.77 0.00 0.00 4.84
378 408 0.602638 ACCAAGCATCGCGTTCTTCA 60.603 50.000 5.77 0.00 0.00 3.02
379 409 0.516877 CCAAGCATCGCGTTCTTCAA 59.483 50.000 5.77 0.00 0.00 2.69
403 433 5.347620 AATTTCCCCTTTAATTAACGCCC 57.652 39.130 0.00 0.00 0.00 6.13
786 3920 3.476419 CGGCTCCCCCATACCGTT 61.476 66.667 0.00 0.00 40.77 4.44
787 3921 2.135581 CGGCTCCCCCATACCGTTA 61.136 63.158 0.00 0.00 40.77 3.18
851 3985 0.547075 TACTACCGCTCTGCCTCTCT 59.453 55.000 0.00 0.00 0.00 3.10
853 3987 1.234821 CTACCGCTCTGCCTCTCTAG 58.765 60.000 0.00 0.00 0.00 2.43
856 3990 0.536233 CCGCTCTGCCTCTCTAGCTA 60.536 60.000 0.00 0.00 32.73 3.32
857 3991 0.874390 CGCTCTGCCTCTCTAGCTAG 59.126 60.000 15.01 15.01 32.73 3.42
858 3992 0.598065 GCTCTGCCTCTCTAGCTAGC 59.402 60.000 16.35 6.62 34.45 3.42
859 3993 1.979855 CTCTGCCTCTCTAGCTAGCA 58.020 55.000 18.83 9.98 0.00 3.49
911 4059 3.696051 AGCAGTCAGTTCATCTCTCTCTC 59.304 47.826 0.00 0.00 0.00 3.20
1744 4926 1.522806 TCGCTGCACTTTTGGACGT 60.523 52.632 0.00 0.00 0.00 4.34
1821 5003 2.227865 TGGAATTTTTGGTAGTGCTCGC 59.772 45.455 0.00 0.00 0.00 5.03
1932 5117 8.821147 TGTATTCTTTCTTTCGTAGCAAGTTA 57.179 30.769 0.00 0.00 30.29 2.24
1985 5170 4.077300 TGATATAGTTGGCTCTTGCAGG 57.923 45.455 0.00 0.00 41.91 4.85
2003 5188 0.674895 GGTTGTGCTGCTAGTCCAGG 60.675 60.000 0.00 0.00 33.44 4.45
2004 5189 1.003355 TTGTGCTGCTAGTCCAGGC 60.003 57.895 0.00 0.00 33.44 4.85
2006 5191 1.222936 GTGCTGCTAGTCCAGGCAT 59.777 57.895 0.00 0.00 37.83 4.40
2048 5233 0.895100 TCACTTGCTGGTTCATGGGC 60.895 55.000 0.00 0.00 0.00 5.36
2144 5993 3.249799 TGTCGTTTTGCTTGTAGTCCATG 59.750 43.478 0.00 0.00 0.00 3.66
2225 6075 9.660544 ATTATTTTGGGAAATACTAAGGCATCT 57.339 29.630 0.00 0.00 37.43 2.90
2274 6124 7.988904 AGCTGTTAGTTGACTTATCGTTATC 57.011 36.000 0.00 0.00 0.00 1.75
2291 6141 8.839310 ATCGTTATCTATAAGCAGCTCATTTT 57.161 30.769 0.00 0.00 0.00 1.82
2298 6148 4.157817 CAGCTCATTTTGCGGCAC 57.842 55.556 0.05 0.00 35.28 5.01
2299 6149 1.444895 CAGCTCATTTTGCGGCACC 60.445 57.895 0.05 0.00 35.28 5.01
2300 6150 1.902918 AGCTCATTTTGCGGCACCA 60.903 52.632 0.05 0.00 35.28 4.17
2301 6151 1.734117 GCTCATTTTGCGGCACCAC 60.734 57.895 0.05 0.00 0.00 4.16
2302 6152 1.442520 CTCATTTTGCGGCACCACG 60.443 57.895 0.05 0.00 0.00 4.94
2303 6153 2.430582 CATTTTGCGGCACCACGG 60.431 61.111 0.05 0.00 0.00 4.94
2304 6154 4.356442 ATTTTGCGGCACCACGGC 62.356 61.111 0.05 0.00 44.49 5.68
2376 6227 4.992688 TGCCACAGTAAACTTTGAAACAG 58.007 39.130 0.00 0.00 0.00 3.16
2442 6293 3.726607 CTCTCACTCAATAGGCACCATC 58.273 50.000 0.00 0.00 0.00 3.51
2446 6297 3.264193 TCACTCAATAGGCACCATCTGTT 59.736 43.478 0.00 0.00 0.00 3.16
2455 6306 2.416431 GGCACCATCTGTTCATTTCTGC 60.416 50.000 0.00 0.00 0.00 4.26
2620 6744 8.860088 AGCTTGAACCTTATTGAGTTTATTGTT 58.140 29.630 0.00 0.00 0.00 2.83
2682 6806 4.399303 GCCATCAATACTTACAAGCACCTT 59.601 41.667 0.00 0.00 0.00 3.50
2709 6833 2.286294 CGTTGCCATACTGATCTTGCTC 59.714 50.000 0.00 0.00 0.00 4.26
2715 6839 3.875727 CCATACTGATCTTGCTCACTTGG 59.124 47.826 0.00 0.00 0.00 3.61
2716 6840 4.511527 CATACTGATCTTGCTCACTTGGT 58.488 43.478 0.00 0.00 0.00 3.67
2717 6841 3.498774 ACTGATCTTGCTCACTTGGTT 57.501 42.857 0.00 0.00 0.00 3.67
2718 6842 3.825328 ACTGATCTTGCTCACTTGGTTT 58.175 40.909 0.00 0.00 0.00 3.27
2869 6993 4.800471 GCTTCACAAAAAGAAAGTGGTCTG 59.200 41.667 0.00 0.00 34.17 3.51
2882 7006 3.535561 AGTGGTCTGTCTGTTTCTTGTG 58.464 45.455 0.00 0.00 0.00 3.33
2928 7052 3.934579 GCATCCCAAATGTTTTTAGGCAG 59.065 43.478 0.00 0.00 0.00 4.85
3009 7133 1.439353 AACACGTGTCCTTGCAGCAG 61.439 55.000 23.61 0.00 0.00 4.24
3010 7134 2.974698 ACGTGTCCTTGCAGCAGC 60.975 61.111 0.00 0.00 42.57 5.25
3059 7183 6.446781 AGATAAGCCATCTGAAAATGTGTG 57.553 37.500 0.00 0.00 42.69 3.82
3060 7184 3.947910 AAGCCATCTGAAAATGTGTGG 57.052 42.857 0.00 0.00 0.00 4.17
3064 7188 2.414559 CCATCTGAAAATGTGTGGCGTC 60.415 50.000 0.00 0.00 0.00 5.19
3081 7205 2.159198 GCGTCCCTTTCCTTATACGACA 60.159 50.000 0.00 0.00 32.35 4.35
3083 7207 3.119388 CGTCCCTTTCCTTATACGACACA 60.119 47.826 0.00 0.00 32.35 3.72
3090 7214 5.471556 TTCCTTATACGACACAGTTGGAA 57.528 39.130 0.00 0.00 0.00 3.53
3117 7241 8.402798 TGTAATGCCTCTTTATGTCAAGAAAA 57.597 30.769 0.00 0.00 32.24 2.29
3166 7290 6.053005 TGTAATTCGAGTCAACTGGAACTTT 58.947 36.000 9.38 4.86 42.11 2.66
3222 7346 9.793252 CTTTAATTATTCCCTGTGAAATGTCTG 57.207 33.333 0.00 0.00 36.33 3.51
3227 7351 6.764308 ATTCCCTGTGAAATGTCTGTTATG 57.236 37.500 0.00 0.00 36.33 1.90
3277 7403 8.019094 CCATACATAATATGATGGCATTATGCG 58.981 37.037 14.42 5.58 46.21 4.73
3474 7600 5.940470 TGAGAACCTTTTATCCTTCAGCTTC 59.060 40.000 0.00 0.00 0.00 3.86
3478 7604 3.311048 CCTTTTATCCTTCAGCTTCGCTC 59.689 47.826 0.00 0.00 36.40 5.03
3483 7609 2.125912 TTCAGCTTCGCTCTCGCC 60.126 61.111 0.00 0.00 36.40 5.54
3524 7659 2.435805 TGCAGAGACTGAACAAGGAGTT 59.564 45.455 2.81 0.00 44.93 3.01
3716 7851 4.451096 CGGCACTGTGTTATGTTAGTTTCT 59.549 41.667 9.86 0.00 0.00 2.52
3733 8034 9.138596 GTTAGTTTCTATATCCTCAGAGTTCCT 57.861 37.037 0.00 0.00 0.00 3.36
3818 8119 6.290605 CCCCTTTCATGTTCTGTTTTTCAAT 58.709 36.000 0.00 0.00 0.00 2.57
3825 8127 5.793026 TGTTCTGTTTTTCAATTGGCAAC 57.207 34.783 0.00 6.94 0.00 4.17
3831 8133 4.800993 TGTTTTTCAATTGGCAACGTGTAG 59.199 37.500 0.00 0.00 42.51 2.74
3859 8161 3.652055 AGCTAGAAGATCACTGGACCAT 58.348 45.455 0.00 0.00 0.00 3.55
3865 8167 1.911357 AGATCACTGGACCATTCTGCA 59.089 47.619 0.00 0.00 0.00 4.41
3882 8184 7.063780 CCATTCTGCATTGTTTTGAATAGTTCC 59.936 37.037 0.00 0.00 0.00 3.62
4071 9154 9.155975 CTCGCTATATTTTCTGGTAGCATATTT 57.844 33.333 0.00 0.00 39.52 1.40
4148 9231 5.934402 ACATAAGTAGAAATCTGACGGGT 57.066 39.130 0.00 0.00 0.00 5.28
4151 9234 4.457834 AAGTAGAAATCTGACGGGTGAG 57.542 45.455 0.00 0.00 0.00 3.51
4171 9254 2.505819 AGGGTGCCGAGAGTAAAATGAT 59.494 45.455 0.00 0.00 0.00 2.45
4183 9266 7.518052 CGAGAGTAAAATGATGATTGAGGAAGC 60.518 40.741 0.00 0.00 0.00 3.86
4221 9304 4.326548 GCTGTAAACTTGAGATACACCGTC 59.673 45.833 0.00 0.00 0.00 4.79
4245 9328 2.618241 TGTCTGGCATGAAACACAGTTC 59.382 45.455 0.00 0.00 32.92 3.01
4566 9725 7.806690 TGTTACTGTGCATCTTGTATTTCTTC 58.193 34.615 0.00 0.00 0.00 2.87
4681 9862 3.743521 TGTTCCTCTTGGAGACATTGTG 58.256 45.455 0.00 0.00 44.24 3.33
4771 9953 8.819643 TTTCGTTTTCCCATTAATCGATTTTT 57.180 26.923 17.19 1.12 0.00 1.94
4772 9954 8.455598 TTCGTTTTCCCATTAATCGATTTTTC 57.544 30.769 17.19 0.00 0.00 2.29
5042 10231 7.343357 AGTATATACAGGGTTTTGCTTGCTTA 58.657 34.615 15.18 0.00 0.00 3.09
5082 10271 6.825610 AGATTAACTGAGCCTCTATCTTTGG 58.174 40.000 0.00 0.00 0.00 3.28
5268 10555 4.721776 TCTTGGGACCTTGAATAGTAGCAT 59.278 41.667 0.00 0.00 0.00 3.79
5291 10578 9.833917 GCATTAAGGGATAAAGGATATACTACC 57.166 37.037 0.00 0.00 0.00 3.18
5295 10582 8.903059 AAGGGATAAAGGATATACTACCTCTG 57.097 38.462 0.00 0.00 35.25 3.35
5297 10584 8.465971 AGGGATAAAGGATATACTACCTCTGTT 58.534 37.037 0.00 0.00 35.25 3.16
5298 10585 8.751242 GGGATAAAGGATATACTACCTCTGTTC 58.249 40.741 0.00 0.00 35.25 3.18
5299 10586 8.751242 GGATAAAGGATATACTACCTCTGTTCC 58.249 40.741 0.00 0.00 35.25 3.62
5300 10587 9.536510 GATAAAGGATATACTACCTCTGTTCCT 57.463 37.037 0.00 0.00 35.25 3.36
5303 10590 9.725206 AAAGGATATACTACCTCTGTTCCTAAA 57.275 33.333 0.00 0.00 35.25 1.85
5312 10599 9.939424 ACTACCTCTGTTCCTAAATATAAGTCT 57.061 33.333 0.00 0.00 0.00 3.24
5315 10602 9.892130 ACCTCTGTTCCTAAATATAAGTCTTTG 57.108 33.333 0.00 0.00 0.00 2.77
5334 10621 9.646427 AGTCTTTGTAGAGATTTCACTATGAAC 57.354 33.333 0.00 0.00 35.89 3.18
5365 10652 8.197988 ACGGAGTAAAATGAATGAATCTACAC 57.802 34.615 0.00 0.00 41.94 2.90
5366 10653 7.280205 ACGGAGTAAAATGAATGAATCTACACC 59.720 37.037 0.00 0.00 41.94 4.16
5367 10654 7.254795 CGGAGTAAAATGAATGAATCTACACCC 60.255 40.741 0.00 0.00 0.00 4.61
5368 10655 7.775561 GGAGTAAAATGAATGAATCTACACCCT 59.224 37.037 0.00 0.00 0.00 4.34
5375 10662 7.333528 TGAATGAATCTACACCCTAAAATGC 57.666 36.000 0.00 0.00 0.00 3.56
5376 10663 6.889177 TGAATGAATCTACACCCTAAAATGCA 59.111 34.615 0.00 0.00 0.00 3.96
5377 10664 7.560991 TGAATGAATCTACACCCTAAAATGCAT 59.439 33.333 0.00 0.00 0.00 3.96
5378 10665 6.942532 TGAATCTACACCCTAAAATGCATC 57.057 37.500 0.00 0.00 0.00 3.91
5379 10666 6.662755 TGAATCTACACCCTAAAATGCATCT 58.337 36.000 0.00 0.00 0.00 2.90
5380 10667 7.801104 TGAATCTACACCCTAAAATGCATCTA 58.199 34.615 0.00 0.00 0.00 1.98
5381 10668 8.439971 TGAATCTACACCCTAAAATGCATCTAT 58.560 33.333 0.00 0.00 0.00 1.98
5382 10669 9.944376 GAATCTACACCCTAAAATGCATCTATA 57.056 33.333 0.00 0.00 0.00 1.31
5388 10675 9.672673 ACACCCTAAAATGCATCTATATACATC 57.327 33.333 0.00 0.00 0.00 3.06
5389 10676 9.113838 CACCCTAAAATGCATCTATATACATCC 57.886 37.037 0.00 0.00 0.00 3.51
5397 10684 7.639113 TGCATCTATATACATCCGTATGTGA 57.361 36.000 3.56 0.00 45.99 3.58
5398 10685 8.237811 TGCATCTATATACATCCGTATGTGAT 57.762 34.615 3.56 0.26 45.99 3.06
5399 10686 8.695456 TGCATCTATATACATCCGTATGTGATT 58.305 33.333 3.56 0.00 45.99 2.57
5400 10687 9.186323 GCATCTATATACATCCGTATGTGATTC 57.814 37.037 3.56 0.00 45.99 2.52
5406 10693 5.213891 ACATCCGTATGTGATTCATAGCA 57.786 39.130 0.00 0.00 44.79 3.49
5407 10694 5.610398 ACATCCGTATGTGATTCATAGCAA 58.390 37.500 0.00 0.00 44.79 3.91
5408 10695 6.054941 ACATCCGTATGTGATTCATAGCAAA 58.945 36.000 0.00 0.00 44.79 3.68
5409 10696 6.542005 ACATCCGTATGTGATTCATAGCAAAA 59.458 34.615 0.00 0.00 44.79 2.44
5410 10697 7.229306 ACATCCGTATGTGATTCATAGCAAAAT 59.771 33.333 0.00 0.00 44.79 1.82
5411 10698 7.189693 TCCGTATGTGATTCATAGCAAAATC 57.810 36.000 0.00 0.00 39.36 2.17
5412 10699 6.992123 TCCGTATGTGATTCATAGCAAAATCT 59.008 34.615 0.00 0.00 39.36 2.40
5413 10700 7.171508 TCCGTATGTGATTCATAGCAAAATCTC 59.828 37.037 0.00 0.00 39.36 2.75
5414 10701 7.172190 CCGTATGTGATTCATAGCAAAATCTCT 59.828 37.037 0.00 0.00 39.36 3.10
5415 10702 9.196552 CGTATGTGATTCATAGCAAAATCTCTA 57.803 33.333 0.00 0.00 39.36 2.43
5417 10704 8.969260 ATGTGATTCATAGCAAAATCTCTACA 57.031 30.769 0.00 0.00 34.67 2.74
5418 10705 8.791327 TGTGATTCATAGCAAAATCTCTACAA 57.209 30.769 0.00 0.00 33.86 2.41
5419 10706 9.230122 TGTGATTCATAGCAAAATCTCTACAAA 57.770 29.630 0.00 0.00 33.86 2.83
5420 10707 9.713740 GTGATTCATAGCAAAATCTCTACAAAG 57.286 33.333 0.00 0.00 33.86 2.77
5421 10708 9.671279 TGATTCATAGCAAAATCTCTACAAAGA 57.329 29.630 0.00 0.00 33.86 2.52
5422 10709 9.928236 GATTCATAGCAAAATCTCTACAAAGAC 57.072 33.333 0.00 0.00 0.00 3.01
5423 10710 9.678260 ATTCATAGCAAAATCTCTACAAAGACT 57.322 29.630 0.00 0.00 0.00 3.24
5424 10711 9.507329 TTCATAGCAAAATCTCTACAAAGACTT 57.493 29.630 0.00 0.00 0.00 3.01
5440 10727 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
5441 10728 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
5442 10729 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
5443 10730 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
5444 10731 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
5621 10909 8.750515 TGCTCATTCTTTATCATTTACCATCA 57.249 30.769 0.00 0.00 0.00 3.07
5650 10939 4.542525 TGGGGGTCACTTAAGGTTCATAAT 59.457 41.667 7.53 0.00 0.00 1.28
5727 11016 3.057315 CCAAATGGCTTGACTTGTGTAGG 60.057 47.826 0.00 0.00 37.17 3.18
5916 12068 4.142665 GCCTTCCTGTTTTTCGATAAGGAC 60.143 45.833 0.00 0.00 36.78 3.85
5922 12074 1.632422 TTTTCGATAAGGACGGCGAC 58.368 50.000 16.62 7.58 31.91 5.19
5982 12134 1.073923 GAGGATGGGGCGGTTGATATT 59.926 52.381 0.00 0.00 0.00 1.28
5985 12137 2.039879 GGATGGGGCGGTTGATATTACT 59.960 50.000 0.00 0.00 0.00 2.24
6048 12200 2.288395 GGTGGAGGTTCATTTGCACTTG 60.288 50.000 0.00 0.00 36.13 3.16
6067 12219 2.303175 TGTGCCAAAAGGAAGGTACAC 58.697 47.619 0.00 0.00 44.00 2.90
6087 12239 3.713764 CACCCTTCAGAATGTATCCCTCT 59.286 47.826 0.00 0.00 37.40 3.69
6095 12247 7.017319 TCAGAATGTATCCCTCTCGATACTA 57.983 40.000 9.46 0.00 43.36 1.82
6166 12318 7.516198 AGAGTTTGTAGCAATGATGAAAACT 57.484 32.000 11.37 11.37 38.66 2.66
6265 12417 5.532779 GGATGGATCTGTAAAGATGGGAAAC 59.467 44.000 0.00 0.00 0.00 2.78
6349 12501 3.070302 CCCACTAAGCATAGACCCTCTTC 59.930 52.174 2.38 0.00 33.15 2.87
6568 12724 3.560025 CCCTCAGATACACTTTGTTGGCT 60.560 47.826 0.00 0.00 0.00 4.75
6693 12854 2.355115 CCGGGGGAAAGGGACAAG 59.645 66.667 0.00 0.00 0.00 3.16
6694 12855 2.228480 CCGGGGGAAAGGGACAAGA 61.228 63.158 0.00 0.00 0.00 3.02
6695 12856 1.299976 CGGGGGAAAGGGACAAGAG 59.700 63.158 0.00 0.00 0.00 2.85
6792 12959 1.204941 GATTGTCTGAGGGTACGCTGT 59.795 52.381 18.29 0.00 0.00 4.40
6870 13037 1.068748 CCTGCAGTTTGTCATCACAGC 60.069 52.381 13.81 0.00 32.71 4.40
6906 13073 1.339055 TGCCTGGTCTCATGTACTTGC 60.339 52.381 3.90 0.00 0.00 4.01
6907 13074 1.339055 GCCTGGTCTCATGTACTTGCA 60.339 52.381 3.90 0.00 0.00 4.08
6909 13076 2.005451 CTGGTCTCATGTACTTGCAGC 58.995 52.381 3.90 3.95 0.00 5.25
6910 13077 1.002366 GGTCTCATGTACTTGCAGCG 58.998 55.000 3.90 0.00 0.00 5.18
6911 13078 1.404181 GGTCTCATGTACTTGCAGCGA 60.404 52.381 3.90 0.00 0.00 4.93
6912 13079 2.544685 GTCTCATGTACTTGCAGCGAT 58.455 47.619 3.90 0.00 0.00 4.58
6913 13080 2.537625 GTCTCATGTACTTGCAGCGATC 59.462 50.000 3.90 0.00 0.00 3.69
6914 13081 1.863454 CTCATGTACTTGCAGCGATCC 59.137 52.381 3.90 0.00 0.00 3.36
6919 13093 1.016627 TACTTGCAGCGATCCATTGC 58.983 50.000 4.31 4.31 38.30 3.56
6937 13111 3.701532 TGCTCGTGGGTTTAAACTTTG 57.298 42.857 17.50 6.26 0.00 2.77
6953 13127 2.441750 ACTTTGAACCCCACTGCTCTTA 59.558 45.455 0.00 0.00 0.00 2.10
6954 13128 3.074538 ACTTTGAACCCCACTGCTCTTAT 59.925 43.478 0.00 0.00 0.00 1.73
6955 13129 3.806949 TTGAACCCCACTGCTCTTATT 57.193 42.857 0.00 0.00 0.00 1.40
6956 13130 4.919774 TTGAACCCCACTGCTCTTATTA 57.080 40.909 0.00 0.00 0.00 0.98
6957 13131 4.487714 TGAACCCCACTGCTCTTATTAG 57.512 45.455 0.00 0.00 0.00 1.73
6958 13132 4.101114 TGAACCCCACTGCTCTTATTAGA 58.899 43.478 0.00 0.00 0.00 2.10
6987 13161 5.436175 TGCTTCCGAAATCATTGGAGATTA 58.564 37.500 0.00 0.00 37.24 1.75
7057 13231 2.992689 TTCAGCTACGGACCGCCA 60.993 61.111 15.39 0.45 0.00 5.69
7059 13233 2.279517 CAGCTACGGACCGCCATC 60.280 66.667 15.39 0.53 0.00 3.51
7063 13237 1.813859 CTACGGACCGCCATCTTCA 59.186 57.895 15.39 0.00 0.00 3.02
7073 13247 1.453155 GCCATCTTCAAGCGGAGAAA 58.547 50.000 0.00 0.00 0.00 2.52
7104 13278 8.686334 TCAAAAGAGAAAGCAGTTTGTTTAGAT 58.314 29.630 0.00 0.00 32.34 1.98
7131 13307 5.230726 CGCATTCAGCTTTATCATTCCAAAC 59.769 40.000 0.00 0.00 42.61 2.93
7132 13308 6.335777 GCATTCAGCTTTATCATTCCAAACT 58.664 36.000 0.00 0.00 41.15 2.66
7133 13309 7.483307 GCATTCAGCTTTATCATTCCAAACTA 58.517 34.615 0.00 0.00 41.15 2.24
7134 13310 7.433425 GCATTCAGCTTTATCATTCCAAACTAC 59.567 37.037 0.00 0.00 41.15 2.73
7135 13311 8.680903 CATTCAGCTTTATCATTCCAAACTACT 58.319 33.333 0.00 0.00 0.00 2.57
7136 13312 7.849804 TCAGCTTTATCATTCCAAACTACTC 57.150 36.000 0.00 0.00 0.00 2.59
7137 13313 6.823689 TCAGCTTTATCATTCCAAACTACTCC 59.176 38.462 0.00 0.00 0.00 3.85
7138 13314 6.038714 CAGCTTTATCATTCCAAACTACTCCC 59.961 42.308 0.00 0.00 0.00 4.30
7139 13315 6.069381 AGCTTTATCATTCCAAACTACTCCCT 60.069 38.462 0.00 0.00 0.00 4.20
7140 13316 6.261158 GCTTTATCATTCCAAACTACTCCCTC 59.739 42.308 0.00 0.00 0.00 4.30
7141 13317 7.510675 TTTATCATTCCAAACTACTCCCTCT 57.489 36.000 0.00 0.00 0.00 3.69
7142 13318 4.826274 TCATTCCAAACTACTCCCTCTG 57.174 45.455 0.00 0.00 0.00 3.35
7143 13319 4.168101 TCATTCCAAACTACTCCCTCTGT 58.832 43.478 0.00 0.00 0.00 3.41
7144 13320 5.338632 TCATTCCAAACTACTCCCTCTGTA 58.661 41.667 0.00 0.00 0.00 2.74
7145 13321 5.783360 TCATTCCAAACTACTCCCTCTGTAA 59.217 40.000 0.00 0.00 0.00 2.41
7146 13322 6.271391 TCATTCCAAACTACTCCCTCTGTAAA 59.729 38.462 0.00 0.00 0.00 2.01
7147 13323 5.740290 TCCAAACTACTCCCTCTGTAAAG 57.260 43.478 0.00 0.00 0.00 1.85
7148 13324 5.399991 TCCAAACTACTCCCTCTGTAAAGA 58.600 41.667 0.00 0.00 0.00 2.52
7149 13325 5.842328 TCCAAACTACTCCCTCTGTAAAGAA 59.158 40.000 0.00 0.00 0.00 2.52
7150 13326 6.328148 TCCAAACTACTCCCTCTGTAAAGAAA 59.672 38.462 0.00 0.00 0.00 2.52
7151 13327 7.017254 TCCAAACTACTCCCTCTGTAAAGAAAT 59.983 37.037 0.00 0.00 0.00 2.17
7152 13328 8.319146 CCAAACTACTCCCTCTGTAAAGAAATA 58.681 37.037 0.00 0.00 0.00 1.40
7153 13329 9.892130 CAAACTACTCCCTCTGTAAAGAAATAT 57.108 33.333 0.00 0.00 0.00 1.28
7159 13335 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
7160 13336 8.554490 TCCCTCTGTAAAGAAATATAAGAGCT 57.446 34.615 0.00 0.00 0.00 4.09
7161 13337 8.993424 TCCCTCTGTAAAGAAATATAAGAGCTT 58.007 33.333 0.00 0.00 0.00 3.74
7162 13338 9.620259 CCCTCTGTAAAGAAATATAAGAGCTTT 57.380 33.333 0.00 0.00 33.76 3.51
7231 13407 6.992715 TGAAGAGAGTAATATTAAAGGCAGGC 59.007 38.462 0.00 0.00 0.00 4.85
7232 13408 6.755542 AGAGAGTAATATTAAAGGCAGGCT 57.244 37.500 0.00 0.00 0.00 4.58
7233 13409 6.529220 AGAGAGTAATATTAAAGGCAGGCTG 58.471 40.000 10.94 10.94 0.00 4.85
7234 13410 5.625150 AGAGTAATATTAAAGGCAGGCTGG 58.375 41.667 17.64 0.00 0.00 4.85
7235 13411 5.369699 AGAGTAATATTAAAGGCAGGCTGGA 59.630 40.000 17.64 0.00 0.00 3.86
7236 13412 5.377478 AGTAATATTAAAGGCAGGCTGGAC 58.623 41.667 17.64 0.00 0.00 4.02
7237 13413 2.729028 TATTAAAGGCAGGCTGGACC 57.271 50.000 17.64 9.93 39.61 4.46
7238 13414 0.704076 ATTAAAGGCAGGCTGGACCA 59.296 50.000 17.64 0.00 43.14 4.02
7239 13415 0.480690 TTAAAGGCAGGCTGGACCAA 59.519 50.000 17.64 0.00 43.14 3.67
7240 13416 0.704076 TAAAGGCAGGCTGGACCAAT 59.296 50.000 17.64 5.43 43.14 3.16
7241 13417 0.901580 AAAGGCAGGCTGGACCAATG 60.902 55.000 17.64 0.00 43.14 2.82
7242 13418 2.757099 GGCAGGCTGGACCAATGG 60.757 66.667 17.64 0.00 43.14 3.16
7243 13419 2.356278 GCAGGCTGGACCAATGGA 59.644 61.111 17.64 0.00 43.14 3.41
7244 13420 1.751927 GCAGGCTGGACCAATGGAG 60.752 63.158 17.64 0.00 43.14 3.86
7245 13421 1.993653 CAGGCTGGACCAATGGAGA 59.006 57.895 6.16 0.00 43.14 3.71
7246 13422 0.329261 CAGGCTGGACCAATGGAGAA 59.671 55.000 6.16 0.00 43.14 2.87
7247 13423 1.064166 CAGGCTGGACCAATGGAGAAT 60.064 52.381 6.16 0.00 43.14 2.40
7248 13424 1.064166 AGGCTGGACCAATGGAGAATG 60.064 52.381 6.16 0.00 43.14 2.67
7249 13425 1.341383 GGCTGGACCAATGGAGAATGT 60.341 52.381 6.16 0.00 38.86 2.71
7250 13426 2.092429 GGCTGGACCAATGGAGAATGTA 60.092 50.000 6.16 0.00 38.86 2.29
7251 13427 3.620488 GCTGGACCAATGGAGAATGTAA 58.380 45.455 6.16 0.00 0.00 2.41
7252 13428 3.629398 GCTGGACCAATGGAGAATGTAAG 59.371 47.826 6.16 0.00 0.00 2.34
7253 13429 4.202441 CTGGACCAATGGAGAATGTAAGG 58.798 47.826 6.16 0.00 0.00 2.69
7254 13430 3.591527 TGGACCAATGGAGAATGTAAGGT 59.408 43.478 6.16 0.00 0.00 3.50
7255 13431 4.044065 TGGACCAATGGAGAATGTAAGGTT 59.956 41.667 6.16 0.00 0.00 3.50
7256 13432 5.016831 GGACCAATGGAGAATGTAAGGTTT 58.983 41.667 6.16 0.00 0.00 3.27
7257 13433 5.480422 GGACCAATGGAGAATGTAAGGTTTT 59.520 40.000 6.16 0.00 0.00 2.43
7258 13434 6.345096 ACCAATGGAGAATGTAAGGTTTTG 57.655 37.500 6.16 0.00 0.00 2.44
7259 13435 5.170748 CCAATGGAGAATGTAAGGTTTTGC 58.829 41.667 0.00 0.00 0.00 3.68
7260 13436 4.701956 ATGGAGAATGTAAGGTTTTGCG 57.298 40.909 0.00 0.00 0.00 4.85
7261 13437 3.745799 TGGAGAATGTAAGGTTTTGCGA 58.254 40.909 0.00 0.00 0.00 5.10
7262 13438 3.751175 TGGAGAATGTAAGGTTTTGCGAG 59.249 43.478 0.00 0.00 0.00 5.03
7263 13439 3.426292 GGAGAATGTAAGGTTTTGCGAGC 60.426 47.826 0.00 0.00 0.00 5.03
7264 13440 3.412386 AGAATGTAAGGTTTTGCGAGCT 58.588 40.909 0.00 0.00 0.00 4.09
7265 13441 3.437049 AGAATGTAAGGTTTTGCGAGCTC 59.563 43.478 2.73 2.73 0.00 4.09
7266 13442 2.248280 TGTAAGGTTTTGCGAGCTCA 57.752 45.000 15.40 0.00 0.00 4.26
7267 13443 2.566913 TGTAAGGTTTTGCGAGCTCAA 58.433 42.857 15.40 0.00 0.00 3.02
7268 13444 2.946329 TGTAAGGTTTTGCGAGCTCAAA 59.054 40.909 15.40 5.46 34.47 2.69
7269 13445 3.378742 TGTAAGGTTTTGCGAGCTCAAAA 59.621 39.130 15.40 11.59 41.87 2.44
7270 13446 3.518634 AAGGTTTTGCGAGCTCAAAAA 57.481 38.095 15.40 16.03 44.49 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.218316 CCTTAGCTTCGCCGGTTCT 59.782 57.895 1.90 0.00 0.00 3.01
1 2 1.814169 CCCTTAGCTTCGCCGGTTC 60.814 63.158 1.90 0.00 0.00 3.62
2 3 1.259840 TACCCTTAGCTTCGCCGGTT 61.260 55.000 1.90 0.00 0.00 4.44
3 4 1.047034 ATACCCTTAGCTTCGCCGGT 61.047 55.000 1.90 0.00 0.00 5.28
4 5 0.963962 TATACCCTTAGCTTCGCCGG 59.036 55.000 0.00 0.00 0.00 6.13
5 6 2.607187 CATATACCCTTAGCTTCGCCG 58.393 52.381 0.00 0.00 0.00 6.46
6 7 2.565834 TCCATATACCCTTAGCTTCGCC 59.434 50.000 0.00 0.00 0.00 5.54
7 8 3.955650 TCCATATACCCTTAGCTTCGC 57.044 47.619 0.00 0.00 0.00 4.70
8 9 7.589958 AGATATCCATATACCCTTAGCTTCG 57.410 40.000 0.00 0.00 0.00 3.79
9 10 8.763601 ACAAGATATCCATATACCCTTAGCTTC 58.236 37.037 0.00 0.00 0.00 3.86
10 11 8.686739 ACAAGATATCCATATACCCTTAGCTT 57.313 34.615 0.00 0.00 0.00 3.74
11 12 9.427821 CTACAAGATATCCATATACCCTTAGCT 57.572 37.037 0.00 0.00 0.00 3.32
12 13 9.203163 ACTACAAGATATCCATATACCCTTAGC 57.797 37.037 0.00 0.00 0.00 3.09
16 17 9.924010 GAGTACTACAAGATATCCATATACCCT 57.076 37.037 0.00 0.00 0.00 4.34
17 18 9.924010 AGAGTACTACAAGATATCCATATACCC 57.076 37.037 0.00 0.00 0.00 3.69
24 25 9.862149 TGATTACAGAGTACTACAAGATATCCA 57.138 33.333 0.00 0.00 0.00 3.41
30 31 9.408648 TCATCATGATTACAGAGTACTACAAGA 57.591 33.333 5.16 0.00 0.00 3.02
36 37 9.579932 TCACTATCATCATGATTACAGAGTACT 57.420 33.333 5.19 0.00 38.26 2.73
39 40 9.539825 GTTTCACTATCATCATGATTACAGAGT 57.460 33.333 5.19 0.00 38.26 3.24
40 41 9.538508 TGTTTCACTATCATCATGATTACAGAG 57.461 33.333 5.19 0.00 38.26 3.35
46 47 9.570468 AAGCTATGTTTCACTATCATCATGATT 57.430 29.630 5.19 0.00 38.26 2.57
47 48 9.570468 AAAGCTATGTTTCACTATCATCATGAT 57.430 29.630 5.24 5.24 40.72 2.45
48 49 8.833493 CAAAGCTATGTTTCACTATCATCATGA 58.167 33.333 0.00 0.00 0.00 3.07
49 50 8.833493 TCAAAGCTATGTTTCACTATCATCATG 58.167 33.333 0.00 0.00 0.00 3.07
50 51 8.969260 TCAAAGCTATGTTTCACTATCATCAT 57.031 30.769 0.00 0.00 0.00 2.45
51 52 8.833493 CATCAAAGCTATGTTTCACTATCATCA 58.167 33.333 0.00 0.00 0.00 3.07
52 53 8.834465 ACATCAAAGCTATGTTTCACTATCATC 58.166 33.333 0.00 0.00 33.83 2.92
53 54 8.743085 ACATCAAAGCTATGTTTCACTATCAT 57.257 30.769 0.00 0.00 33.83 2.45
54 55 8.453320 CAACATCAAAGCTATGTTTCACTATCA 58.547 33.333 10.06 0.00 43.31 2.15
55 56 7.912250 CCAACATCAAAGCTATGTTTCACTATC 59.088 37.037 10.06 0.00 43.31 2.08
56 57 7.611467 TCCAACATCAAAGCTATGTTTCACTAT 59.389 33.333 10.06 0.00 43.31 2.12
57 58 6.939730 TCCAACATCAAAGCTATGTTTCACTA 59.060 34.615 10.06 0.00 43.31 2.74
58 59 5.769662 TCCAACATCAAAGCTATGTTTCACT 59.230 36.000 10.06 0.00 43.31 3.41
59 60 6.012658 TCCAACATCAAAGCTATGTTTCAC 57.987 37.500 10.06 0.00 43.31 3.18
60 61 6.433716 TCATCCAACATCAAAGCTATGTTTCA 59.566 34.615 10.06 1.93 43.31 2.69
61 62 6.855836 TCATCCAACATCAAAGCTATGTTTC 58.144 36.000 10.06 0.00 43.31 2.78
62 63 6.839124 TCATCCAACATCAAAGCTATGTTT 57.161 33.333 10.06 0.00 43.31 2.83
63 64 6.839124 TTCATCCAACATCAAAGCTATGTT 57.161 33.333 7.40 7.40 45.97 2.71
64 65 6.839124 TTTCATCCAACATCAAAGCTATGT 57.161 33.333 0.00 0.00 39.22 2.29
65 66 9.806203 TTTATTTCATCCAACATCAAAGCTATG 57.194 29.630 0.00 0.00 0.00 2.23
66 67 9.807649 GTTTATTTCATCCAACATCAAAGCTAT 57.192 29.630 0.00 0.00 0.00 2.97
67 68 8.250332 GGTTTATTTCATCCAACATCAAAGCTA 58.750 33.333 0.00 0.00 0.00 3.32
68 69 7.099120 GGTTTATTTCATCCAACATCAAAGCT 58.901 34.615 0.00 0.00 0.00 3.74
69 70 6.873076 TGGTTTATTTCATCCAACATCAAAGC 59.127 34.615 0.00 0.00 0.00 3.51
70 71 9.439500 AATGGTTTATTTCATCCAACATCAAAG 57.561 29.630 0.00 0.00 33.55 2.77
71 72 9.217278 CAATGGTTTATTTCATCCAACATCAAA 57.783 29.630 0.00 0.00 33.55 2.69
72 73 7.823310 CCAATGGTTTATTTCATCCAACATCAA 59.177 33.333 0.00 0.00 33.55 2.57
73 74 7.179872 TCCAATGGTTTATTTCATCCAACATCA 59.820 33.333 0.00 0.00 33.55 3.07
74 75 7.492344 GTCCAATGGTTTATTTCATCCAACATC 59.508 37.037 0.00 0.00 33.55 3.06
75 76 7.038445 TGTCCAATGGTTTATTTCATCCAACAT 60.038 33.333 0.00 0.00 33.55 2.71
76 77 6.268617 TGTCCAATGGTTTATTTCATCCAACA 59.731 34.615 0.00 0.00 33.55 3.33
77 78 6.589907 GTGTCCAATGGTTTATTTCATCCAAC 59.410 38.462 0.00 0.00 33.55 3.77
78 79 6.268617 TGTGTCCAATGGTTTATTTCATCCAA 59.731 34.615 0.00 0.00 33.55 3.53
79 80 5.777223 TGTGTCCAATGGTTTATTTCATCCA 59.223 36.000 0.00 0.00 0.00 3.41
80 81 6.279513 TGTGTCCAATGGTTTATTTCATCC 57.720 37.500 0.00 0.00 0.00 3.51
81 82 7.775120 AGATGTGTCCAATGGTTTATTTCATC 58.225 34.615 0.00 5.88 0.00 2.92
82 83 7.722949 AGATGTGTCCAATGGTTTATTTCAT 57.277 32.000 0.00 0.00 0.00 2.57
83 84 7.537596 AAGATGTGTCCAATGGTTTATTTCA 57.462 32.000 0.00 0.00 0.00 2.69
84 85 8.831715 AAAAGATGTGTCCAATGGTTTATTTC 57.168 30.769 0.00 0.00 0.00 2.17
87 88 9.479549 AGATAAAAGATGTGTCCAATGGTTTAT 57.520 29.630 0.00 0.00 0.00 1.40
88 89 8.877864 AGATAAAAGATGTGTCCAATGGTTTA 57.122 30.769 0.00 0.00 0.00 2.01
89 90 7.781324 AGATAAAAGATGTGTCCAATGGTTT 57.219 32.000 0.00 0.00 0.00 3.27
90 91 7.781324 AAGATAAAAGATGTGTCCAATGGTT 57.219 32.000 0.00 0.00 0.00 3.67
91 92 7.781324 AAAGATAAAAGATGTGTCCAATGGT 57.219 32.000 0.00 0.00 0.00 3.55
92 93 8.739039 TGTAAAGATAAAAGATGTGTCCAATGG 58.261 33.333 0.00 0.00 0.00 3.16
95 96 9.513906 TGATGTAAAGATAAAAGATGTGTCCAA 57.486 29.630 0.00 0.00 0.00 3.53
96 97 8.946085 GTGATGTAAAGATAAAAGATGTGTCCA 58.054 33.333 0.00 0.00 0.00 4.02
97 98 8.946085 TGTGATGTAAAGATAAAAGATGTGTCC 58.054 33.333 0.00 0.00 0.00 4.02
104 105 8.999431 GGAGTGTTGTGATGTAAAGATAAAAGA 58.001 33.333 0.00 0.00 0.00 2.52
105 106 9.003658 AGGAGTGTTGTGATGTAAAGATAAAAG 57.996 33.333 0.00 0.00 0.00 2.27
106 107 8.918202 AGGAGTGTTGTGATGTAAAGATAAAA 57.082 30.769 0.00 0.00 0.00 1.52
107 108 9.431887 GTAGGAGTGTTGTGATGTAAAGATAAA 57.568 33.333 0.00 0.00 0.00 1.40
108 109 8.590204 TGTAGGAGTGTTGTGATGTAAAGATAA 58.410 33.333 0.00 0.00 0.00 1.75
109 110 8.129496 TGTAGGAGTGTTGTGATGTAAAGATA 57.871 34.615 0.00 0.00 0.00 1.98
110 111 7.004555 TGTAGGAGTGTTGTGATGTAAAGAT 57.995 36.000 0.00 0.00 0.00 2.40
111 112 6.413783 TGTAGGAGTGTTGTGATGTAAAGA 57.586 37.500 0.00 0.00 0.00 2.52
112 113 6.481976 TGTTGTAGGAGTGTTGTGATGTAAAG 59.518 38.462 0.00 0.00 0.00 1.85
151 153 0.872021 GGAGATGGTTAGACTGCGCG 60.872 60.000 0.00 0.00 0.00 6.86
153 155 2.932614 CAAAGGAGATGGTTAGACTGCG 59.067 50.000 0.00 0.00 0.00 5.18
162 164 4.086706 ACGAGAAAACAAAGGAGATGGT 57.913 40.909 0.00 0.00 0.00 3.55
163 165 6.743575 AATACGAGAAAACAAAGGAGATGG 57.256 37.500 0.00 0.00 0.00 3.51
165 167 7.745620 ACAAATACGAGAAAACAAAGGAGAT 57.254 32.000 0.00 0.00 0.00 2.75
253 277 1.371183 CCTGTGTCGCTTGGGAGAA 59.629 57.895 0.00 0.00 0.00 2.87
255 279 2.046892 CCCTGTGTCGCTTGGGAG 60.047 66.667 8.72 0.00 42.11 4.30
263 287 2.511600 GAATCGGCCCCTGTGTCG 60.512 66.667 0.00 0.00 0.00 4.35
265 289 2.933287 TGGAATCGGCCCCTGTGT 60.933 61.111 0.00 0.00 0.00 3.72
266 290 2.438434 GTGGAATCGGCCCCTGTG 60.438 66.667 0.00 0.00 0.00 3.66
267 291 2.610859 AGTGGAATCGGCCCCTGT 60.611 61.111 0.00 0.00 0.00 4.00
270 294 2.124695 GACAGTGGAATCGGCCCC 60.125 66.667 0.00 0.00 0.00 5.80
271 295 0.394352 AATGACAGTGGAATCGGCCC 60.394 55.000 0.00 0.00 0.00 5.80
312 340 4.032960 TCTACAATGTGGATGCTGGTTT 57.967 40.909 0.00 0.00 0.00 3.27
369 399 3.990092 AGGGGAAATTTTTGAAGAACGC 58.010 40.909 0.00 0.00 0.00 4.84
378 408 6.655848 GGGCGTTAATTAAAGGGGAAATTTTT 59.344 34.615 12.21 0.00 0.00 1.94
379 409 6.174760 GGGCGTTAATTAAAGGGGAAATTTT 58.825 36.000 12.21 0.00 0.00 1.82
403 433 3.850122 TCGGGATATAATCTGCGACTG 57.150 47.619 0.00 0.00 0.00 3.51
653 3787 3.771160 GATGGGTCGCTGGACGGT 61.771 66.667 0.00 0.00 44.39 4.83
713 3847 2.602676 CGGTGGTGGGGAGGACAAT 61.603 63.158 0.00 0.00 0.00 2.71
776 3910 1.068333 CGTCGGGTATAACGGTATGGG 60.068 57.143 2.39 0.00 35.32 4.00
786 3920 1.065199 AGACCTGTGTCGTCGGGTATA 60.065 52.381 8.07 0.00 45.86 1.47
787 3921 0.323178 AGACCTGTGTCGTCGGGTAT 60.323 55.000 8.07 3.74 45.86 2.73
851 3985 0.759436 GGGGGTGCTACTGCTAGCTA 60.759 60.000 17.23 0.00 45.20 3.32
853 3987 1.627297 AAGGGGGTGCTACTGCTAGC 61.627 60.000 8.10 8.10 45.19 3.42
856 3990 1.229658 AGAAGGGGGTGCTACTGCT 60.230 57.895 0.00 0.00 40.48 4.24
857 3991 1.222113 GAGAAGGGGGTGCTACTGC 59.778 63.158 0.00 0.00 40.20 4.40
858 3992 0.539051 CAGAGAAGGGGGTGCTACTG 59.461 60.000 0.00 0.00 0.00 2.74
859 3993 0.117340 ACAGAGAAGGGGGTGCTACT 59.883 55.000 0.00 0.00 0.00 2.57
860 3994 0.537653 GACAGAGAAGGGGGTGCTAC 59.462 60.000 0.00 0.00 0.00 3.58
865 3999 1.081277 GAGGGACAGAGAAGGGGGT 59.919 63.158 0.00 0.00 0.00 4.95
866 4000 2.060980 CGAGGGACAGAGAAGGGGG 61.061 68.421 0.00 0.00 0.00 5.40
867 4001 2.060980 CCGAGGGACAGAGAAGGGG 61.061 68.421 0.00 0.00 0.00 4.79
911 4059 2.829458 GACGGGTCGAGGAGGAGG 60.829 72.222 0.00 0.00 0.00 4.30
1753 4935 2.058798 TCACGCGCTTAGACAGAAAAG 58.941 47.619 5.73 0.00 0.00 2.27
1754 4936 2.143008 TCACGCGCTTAGACAGAAAA 57.857 45.000 5.73 0.00 0.00 2.29
1755 4937 2.259618 GATCACGCGCTTAGACAGAAA 58.740 47.619 5.73 0.00 0.00 2.52
1756 4938 1.469251 GGATCACGCGCTTAGACAGAA 60.469 52.381 5.73 0.00 0.00 3.02
1843 5025 1.067846 AGTCAGATTACGCAAGCACGA 60.068 47.619 0.00 0.00 45.62 4.35
1932 5117 3.083122 ACCGAGTACTGACATACCACT 57.917 47.619 0.00 0.00 0.00 4.00
1985 5170 1.301677 GCCTGGACTAGCAGCACAAC 61.302 60.000 0.00 0.00 0.00 3.32
2003 5188 5.645497 CCTAGCACCTATAAGATTCCAATGC 59.355 44.000 0.00 0.00 0.00 3.56
2004 5189 6.773638 ACCTAGCACCTATAAGATTCCAATG 58.226 40.000 0.00 0.00 0.00 2.82
2006 5191 6.385759 TGAACCTAGCACCTATAAGATTCCAA 59.614 38.462 0.00 0.00 0.00 3.53
2015 5200 4.030913 AGCAAGTGAACCTAGCACCTATA 58.969 43.478 0.00 0.00 36.95 1.31
2016 5201 2.840651 AGCAAGTGAACCTAGCACCTAT 59.159 45.455 0.00 0.00 36.95 2.57
2048 5233 5.588648 TCCCAAATCCTAAAAATAGCAGTCG 59.411 40.000 0.00 0.00 0.00 4.18
2173 6023 3.689347 CTCAGGTTCAACATGGGATCAA 58.311 45.455 0.00 0.00 30.75 2.57
2225 6075 4.402474 CGTATAGATGATGATAGGCCACCA 59.598 45.833 5.01 0.00 0.00 4.17
2274 6124 3.851105 GCCGCAAAATGAGCTGCTTATAG 60.851 47.826 7.39 2.76 38.86 1.31
2298 6148 2.396590 AACCAATACTACTGCCGTGG 57.603 50.000 0.00 0.00 0.00 4.94
2299 6149 7.724305 AATAATAACCAATACTACTGCCGTG 57.276 36.000 0.00 0.00 0.00 4.94
2376 6227 8.823818 ACAACTGTGTAAAACTGTTATCAGTAC 58.176 33.333 6.87 3.17 45.91 2.73
2442 6293 6.289834 AGAGATATGGAGCAGAAATGAACAG 58.710 40.000 0.00 0.00 0.00 3.16
2446 6297 6.239714 GGGTAAGAGATATGGAGCAGAAATGA 60.240 42.308 0.00 0.00 0.00 2.57
2455 6306 6.325028 TCAACAAGAGGGTAAGAGATATGGAG 59.675 42.308 0.00 0.00 0.00 3.86
2590 6714 3.503748 ACTCAATAAGGTTCAAGCTGTGC 59.496 43.478 0.00 0.00 0.00 4.57
2620 6744 0.322456 CGAGCAAGGGTGGGAATTCA 60.322 55.000 7.93 0.00 0.00 2.57
2682 6806 3.195610 AGATCAGTATGGCAACGAAGACA 59.804 43.478 0.00 0.00 42.51 3.41
2688 6812 2.283298 AGCAAGATCAGTATGGCAACG 58.717 47.619 0.00 0.00 42.51 4.10
2709 6833 6.054035 ACAAACAAACAAACAAACCAAGTG 57.946 33.333 0.00 0.00 0.00 3.16
2715 6839 8.677635 GTGATTGAAACAAACAAACAAACAAAC 58.322 29.630 0.00 0.00 33.37 2.93
2716 6840 8.616076 AGTGATTGAAACAAACAAACAAACAAA 58.384 25.926 0.00 0.00 33.37 2.83
2717 6841 8.147642 AGTGATTGAAACAAACAAACAAACAA 57.852 26.923 0.00 0.00 33.37 2.83
2718 6842 7.721286 AGTGATTGAAACAAACAAACAAACA 57.279 28.000 0.00 0.00 33.37 2.83
2777 6901 2.685897 GTTACAACTGTTTGGTGGCTCA 59.314 45.455 0.00 0.00 37.78 4.26
2869 6993 4.970003 CGAACAAATCCACAAGAAACAGAC 59.030 41.667 0.00 0.00 0.00 3.51
2882 7006 6.430451 CCTATAATCAACAGCGAACAAATCC 58.570 40.000 0.00 0.00 0.00 3.01
2928 7052 3.973657 CCAGATTGGCAATAAGATGTGC 58.026 45.455 13.65 0.00 40.14 4.57
3009 7133 1.347320 CGTTCTTCCTACAAGGACGC 58.653 55.000 2.37 0.00 45.78 5.19
3027 7151 9.692749 TTTTCAGATGGCTTATCTATTAGTACG 57.307 33.333 4.14 0.00 44.34 3.67
3059 7183 1.410153 TCGTATAAGGAAAGGGACGCC 59.590 52.381 0.00 0.00 0.00 5.68
3060 7184 2.159198 TGTCGTATAAGGAAAGGGACGC 60.159 50.000 0.00 0.00 0.00 5.19
3064 7188 4.467198 ACTGTGTCGTATAAGGAAAGGG 57.533 45.455 0.00 0.00 0.00 3.95
3081 7205 4.666512 AGAGGCATTACAATTCCAACTGT 58.333 39.130 0.00 0.00 0.00 3.55
3083 7207 7.397192 ACATAAAGAGGCATTACAATTCCAACT 59.603 33.333 0.00 0.00 0.00 3.16
3090 7214 8.579850 TTCTTGACATAAAGAGGCATTACAAT 57.420 30.769 0.00 0.00 37.48 2.71
3117 7241 9.927668 CAAACATAAAAAGTGATATTTGAGGGT 57.072 29.630 0.00 0.00 0.00 4.34
3166 7290 6.018751 GCGACAGATAGCAAAGTAAATCATCA 60.019 38.462 0.00 0.00 0.00 3.07
3253 7379 8.907222 TCGCATAATGCCATCATATTATGTAT 57.093 30.769 14.70 0.00 43.85 2.29
3277 7403 7.155328 TCAGAGAACTTCTCACCTAAACAATC 58.845 38.462 19.00 0.00 45.73 2.67
3478 7604 1.227263 CATGGTAAGACCGGGCGAG 60.227 63.158 6.32 0.00 42.58 5.03
3483 7609 3.684788 GCAATATAGCATGGTAAGACCGG 59.315 47.826 8.98 0.00 42.58 5.28
3733 8034 6.419413 GGAACTTACGCAAATTTGATGTTTCA 59.581 34.615 22.31 2.14 0.00 2.69
3818 8119 2.831685 ATCAGACTACACGTTGCCAA 57.168 45.000 0.00 0.00 0.00 4.52
3825 8127 6.425417 TGATCTTCTAGCTATCAGACTACACG 59.575 42.308 0.00 0.00 0.00 4.49
3831 8133 5.767665 TCCAGTGATCTTCTAGCTATCAGAC 59.232 44.000 0.00 0.00 30.58 3.51
3859 8161 6.454795 GGGAACTATTCAAAACAATGCAGAA 58.545 36.000 0.00 0.00 0.00 3.02
3865 8167 9.065798 CAAAAATGGGGAACTATTCAAAACAAT 57.934 29.630 0.00 0.00 41.12 2.71
3882 8184 7.068103 TGGTAGATACTTATGTGCAAAAATGGG 59.932 37.037 0.00 0.00 0.00 4.00
4071 9154 4.973168 ACATCCAGCTTACAGAAGTCAAA 58.027 39.130 0.00 0.00 34.90 2.69
4148 9231 1.344065 TTTTACTCTCGGCACCCTCA 58.656 50.000 0.00 0.00 0.00 3.86
4151 9234 2.396590 TCATTTTACTCTCGGCACCC 57.603 50.000 0.00 0.00 0.00 4.61
4171 9254 8.125978 ACATTTAAAATCTGCTTCCTCAATCA 57.874 30.769 0.00 0.00 0.00 2.57
4221 9304 1.805943 TGTGTTTCATGCCAGACATCG 59.194 47.619 0.00 0.00 36.64 3.84
4245 9328 4.960938 TGTAATAGCCATCTAGTGCTTGG 58.039 43.478 8.93 4.92 39.00 3.61
4396 9480 5.824097 AGCAAAATGAAGAAATGGCTTTGTT 59.176 32.000 0.00 0.00 31.08 2.83
4681 9862 1.889545 ACTGCTTCAGCCTTGACTTC 58.110 50.000 0.00 0.00 41.18 3.01
4771 9953 6.393897 AGAGATATTCAGTATCAAAGGGGGA 58.606 40.000 0.00 0.00 41.43 4.81
4772 9954 6.500049 AGAGAGATATTCAGTATCAAAGGGGG 59.500 42.308 0.00 0.00 41.43 5.40
5286 10573 9.939424 AGACTTATATTTAGGAACAGAGGTAGT 57.061 33.333 0.00 0.00 0.00 2.73
5289 10576 9.892130 CAAAGACTTATATTTAGGAACAGAGGT 57.108 33.333 0.00 0.00 0.00 3.85
5290 10577 9.892130 ACAAAGACTTATATTTAGGAACAGAGG 57.108 33.333 0.00 0.00 0.00 3.69
5308 10595 9.646427 GTTCATAGTGAAATCTCTACAAAGACT 57.354 33.333 0.00 0.00 38.22 3.24
5339 10626 9.309516 GTGTAGATTCATTCATTTTACTCCGTA 57.690 33.333 0.00 0.00 0.00 4.02
5340 10627 7.280205 GGTGTAGATTCATTCATTTTACTCCGT 59.720 37.037 0.00 0.00 0.00 4.69
5341 10628 7.254795 GGGTGTAGATTCATTCATTTTACTCCG 60.255 40.741 0.00 0.00 0.00 4.63
5342 10629 7.775561 AGGGTGTAGATTCATTCATTTTACTCC 59.224 37.037 0.00 0.00 0.00 3.85
5343 10630 8.738645 AGGGTGTAGATTCATTCATTTTACTC 57.261 34.615 0.00 0.00 0.00 2.59
5351 10638 6.889177 TGCATTTTAGGGTGTAGATTCATTCA 59.111 34.615 0.00 0.00 0.00 2.57
5352 10639 7.333528 TGCATTTTAGGGTGTAGATTCATTC 57.666 36.000 0.00 0.00 0.00 2.67
5354 10641 7.293073 AGATGCATTTTAGGGTGTAGATTCAT 58.707 34.615 0.00 0.00 0.00 2.57
5355 10642 6.662755 AGATGCATTTTAGGGTGTAGATTCA 58.337 36.000 0.00 0.00 0.00 2.57
5356 10643 8.854614 ATAGATGCATTTTAGGGTGTAGATTC 57.145 34.615 0.00 0.00 0.00 2.52
5362 10649 9.672673 GATGTATATAGATGCATTTTAGGGTGT 57.327 33.333 0.00 0.00 38.38 4.16
5363 10650 9.113838 GGATGTATATAGATGCATTTTAGGGTG 57.886 37.037 0.00 0.00 38.38 4.61
5365 10652 7.987458 ACGGATGTATATAGATGCATTTTAGGG 59.013 37.037 11.19 0.00 38.38 3.53
5366 10653 8.948631 ACGGATGTATATAGATGCATTTTAGG 57.051 34.615 11.19 0.00 38.38 2.69
5371 10658 8.695456 TCACATACGGATGTATATAGATGCATT 58.305 33.333 14.23 1.23 44.82 3.56
5374 10661 9.186323 GAATCACATACGGATGTATATAGATGC 57.814 37.037 14.23 6.60 44.82 3.91
5380 10667 8.695456 TGCTATGAATCACATACGGATGTATAT 58.305 33.333 14.23 7.46 44.82 0.86
5381 10668 8.062065 TGCTATGAATCACATACGGATGTATA 57.938 34.615 14.23 6.48 44.82 1.47
5382 10669 6.935167 TGCTATGAATCACATACGGATGTAT 58.065 36.000 14.23 5.54 44.82 2.29
5383 10670 6.339587 TGCTATGAATCACATACGGATGTA 57.660 37.500 14.23 2.61 44.82 2.29
5387 10674 6.992123 AGATTTTGCTATGAATCACATACGGA 59.008 34.615 0.00 0.00 40.07 4.69
5388 10675 7.172190 AGAGATTTTGCTATGAATCACATACGG 59.828 37.037 0.00 0.00 40.07 4.02
5389 10676 8.081208 AGAGATTTTGCTATGAATCACATACG 57.919 34.615 0.00 0.00 40.07 3.06
5392 10679 8.969260 TGTAGAGATTTTGCTATGAATCACAT 57.031 30.769 0.00 0.00 42.39 3.21
5393 10680 8.791327 TTGTAGAGATTTTGCTATGAATCACA 57.209 30.769 0.00 0.00 35.28 3.58
5394 10681 9.713740 CTTTGTAGAGATTTTGCTATGAATCAC 57.286 33.333 0.00 0.00 35.28 3.06
5397 10684 9.678260 AGTCTTTGTAGAGATTTTGCTATGAAT 57.322 29.630 0.00 0.00 0.00 2.57
5398 10685 9.507329 AAGTCTTTGTAGAGATTTTGCTATGAA 57.493 29.630 0.00 0.00 0.00 2.57
5415 10702 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
5416 10703 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
5417 10704 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
5418 10705 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
5419 10706 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
5420 10707 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
5421 10708 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
5422 10709 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
5423 10710 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
5424 10711 9.827198 TTATTACTCCCTCCGTTCCTAAATATA 57.173 33.333 0.00 0.00 0.00 0.86
5425 10712 8.731591 TTATTACTCCCTCCGTTCCTAAATAT 57.268 34.615 0.00 0.00 0.00 1.28
5426 10713 8.424133 GTTTATTACTCCCTCCGTTCCTAAATA 58.576 37.037 0.00 0.00 0.00 1.40
5427 10714 7.126879 AGTTTATTACTCCCTCCGTTCCTAAAT 59.873 37.037 0.00 0.00 28.23 1.40
5428 10715 6.441604 AGTTTATTACTCCCTCCGTTCCTAAA 59.558 38.462 0.00 0.00 28.23 1.85
5429 10716 5.960202 AGTTTATTACTCCCTCCGTTCCTAA 59.040 40.000 0.00 0.00 28.23 2.69
5430 10717 5.522641 AGTTTATTACTCCCTCCGTTCCTA 58.477 41.667 0.00 0.00 28.23 2.94
5431 10718 4.359996 AGTTTATTACTCCCTCCGTTCCT 58.640 43.478 0.00 0.00 28.23 3.36
5432 10719 4.750021 AGTTTATTACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 28.23 3.62
5433 10720 4.331992 GCAAGTTTATTACTCCCTCCGTTC 59.668 45.833 0.00 0.00 35.54 3.95
5434 10721 4.259356 GCAAGTTTATTACTCCCTCCGTT 58.741 43.478 0.00 0.00 35.54 4.44
5435 10722 3.262405 TGCAAGTTTATTACTCCCTCCGT 59.738 43.478 0.00 0.00 35.54 4.69
5436 10723 3.621715 GTGCAAGTTTATTACTCCCTCCG 59.378 47.826 0.00 0.00 35.54 4.63
5437 10724 4.844884 AGTGCAAGTTTATTACTCCCTCC 58.155 43.478 0.00 0.00 35.54 4.30
5438 10725 6.430000 TGAAAGTGCAAGTTTATTACTCCCTC 59.570 38.462 0.00 0.00 40.14 4.30
5439 10726 6.303839 TGAAAGTGCAAGTTTATTACTCCCT 58.696 36.000 0.00 0.00 40.14 4.20
5440 10727 6.569179 TGAAAGTGCAAGTTTATTACTCCC 57.431 37.500 0.00 0.00 40.14 4.30
5441 10728 9.129209 GAAATGAAAGTGCAAGTTTATTACTCC 57.871 33.333 0.00 0.00 40.14 3.85
5442 10729 9.129209 GGAAATGAAAGTGCAAGTTTATTACTC 57.871 33.333 0.00 0.00 40.14 2.59
5443 10730 8.637986 TGGAAATGAAAGTGCAAGTTTATTACT 58.362 29.630 0.00 0.00 40.14 2.24
5444 10731 8.810652 TGGAAATGAAAGTGCAAGTTTATTAC 57.189 30.769 0.00 0.00 40.14 1.89
5585 10872 5.649782 AAAGAATGAGCAGGTACATTTGG 57.350 39.130 0.00 0.00 36.94 3.28
5627 10915 1.822425 TGAACCTTAAGTGACCCCCA 58.178 50.000 0.97 0.00 0.00 4.96
5650 10939 9.529325 GTCACATGCAATAGTGTTATACTCTTA 57.471 33.333 14.42 0.00 40.89 2.10
5660 10949 2.995939 CTCACGTCACATGCAATAGTGT 59.004 45.455 14.42 1.41 37.07 3.55
5727 11016 6.690194 TGTTCTCGTAAATACTAGAGGACC 57.310 41.667 0.00 0.00 38.20 4.46
5916 12068 1.915093 CTCGATAAAACCGTCGCCG 59.085 57.895 0.00 0.00 37.74 6.46
5922 12074 1.136305 TCCTCAGGCTCGATAAAACCG 59.864 52.381 0.00 0.00 0.00 4.44
5982 12134 6.406370 CAATATGTCCTTCACCACTTCAGTA 58.594 40.000 0.00 0.00 0.00 2.74
5985 12137 4.009675 GCAATATGTCCTTCACCACTTCA 58.990 43.478 0.00 0.00 0.00 3.02
6048 12200 1.611977 GGTGTACCTTCCTTTTGGCAC 59.388 52.381 0.00 0.00 40.12 5.01
6067 12219 3.006323 CGAGAGGGATACATTCTGAAGGG 59.994 52.174 7.01 0.00 39.74 3.95
6087 12239 7.549134 ACAATCAAAGCAGATGTTTAGTATCGA 59.451 33.333 0.00 0.00 0.00 3.59
6095 12247 5.464389 GCAGAAACAATCAAAGCAGATGTTT 59.536 36.000 2.18 2.18 34.76 2.83
6166 12318 1.597854 CTTTCGCCAGTCTGTGCCA 60.598 57.895 0.00 0.00 0.00 4.92
6265 12417 0.095935 CAAGCCTGCGATTTCACTCG 59.904 55.000 0.00 0.00 41.54 4.18
6276 12428 2.694760 GCACCAGCTACAAGCCTGC 61.695 63.158 0.00 0.00 43.77 4.85
6349 12501 5.278169 CGCCAAAATAATCATCAGAGAAGGG 60.278 44.000 0.00 0.00 0.00 3.95
6568 12724 5.147330 ACAGTACAGACGATTCCATCAAA 57.853 39.130 0.00 0.00 0.00 2.69
6693 12854 2.423446 CTACATGGCGCCCTCCTC 59.577 66.667 26.77 0.00 0.00 3.71
6694 12855 3.866582 GCTACATGGCGCCCTCCT 61.867 66.667 26.77 6.07 0.00 3.69
6695 12856 4.937431 GGCTACATGGCGCCCTCC 62.937 72.222 26.77 11.79 40.43 4.30
6792 12959 4.335400 TCAGTATCAGACAGCAACACAA 57.665 40.909 0.00 0.00 0.00 3.33
6870 13037 6.029346 ACCAGGCAAACTCTGAAAATTATG 57.971 37.500 0.00 0.00 34.36 1.90
6910 13077 1.463674 AAACCCACGAGCAATGGATC 58.536 50.000 2.64 0.00 39.87 3.36
6911 13078 2.799126 TAAACCCACGAGCAATGGAT 57.201 45.000 2.64 0.00 39.87 3.41
6912 13079 2.554893 GTTTAAACCCACGAGCAATGGA 59.445 45.455 7.12 0.00 39.87 3.41
6913 13080 2.556622 AGTTTAAACCCACGAGCAATGG 59.443 45.455 14.72 0.00 36.94 3.16
6914 13081 3.915437 AGTTTAAACCCACGAGCAATG 57.085 42.857 14.72 0.00 0.00 2.82
6919 13093 4.603985 GGTTCAAAGTTTAAACCCACGAG 58.396 43.478 14.72 0.39 37.13 4.18
6937 13111 4.698575 CTCTAATAAGAGCAGTGGGGTTC 58.301 47.826 0.00 0.00 42.79 3.62
6987 13161 2.391678 GAAATGGGAGGAATGCCACAT 58.608 47.619 0.00 0.00 36.29 3.21
7047 13221 1.079127 CTTGAAGATGGCGGTCCGT 60.079 57.895 13.94 0.00 34.14 4.69
7048 13222 2.464459 GCTTGAAGATGGCGGTCCG 61.464 63.158 6.99 6.99 34.14 4.79
7049 13223 2.464459 CGCTTGAAGATGGCGGTCC 61.464 63.158 0.00 0.00 44.32 4.46
7050 13224 3.093278 CGCTTGAAGATGGCGGTC 58.907 61.111 0.00 0.00 44.32 4.79
7073 13247 8.552083 ACAAACTGCTTTCTCTTTTGATTTTT 57.448 26.923 0.00 0.00 32.60 1.94
7092 13266 6.314784 GCTGAATGCGTTATCTAAACAAACT 58.685 36.000 0.00 0.00 0.00 2.66
7104 13278 5.588246 TGGAATGATAAAGCTGAATGCGTTA 59.412 36.000 0.00 0.00 46.29 3.18
7133 13309 8.425703 GCTCTTATATTTCTTTACAGAGGGAGT 58.574 37.037 0.00 0.00 0.00 3.85
7134 13310 8.646900 AGCTCTTATATTTCTTTACAGAGGGAG 58.353 37.037 0.00 0.00 0.00 4.30
7135 13311 8.554490 AGCTCTTATATTTCTTTACAGAGGGA 57.446 34.615 0.00 0.00 0.00 4.20
7136 13312 9.620259 AAAGCTCTTATATTTCTTTACAGAGGG 57.380 33.333 0.00 0.00 0.00 4.30
7205 13381 7.663493 GCCTGCCTTTAATATTACTCTCTTCAT 59.337 37.037 0.00 0.00 0.00 2.57
7206 13382 6.992715 GCCTGCCTTTAATATTACTCTCTTCA 59.007 38.462 0.00 0.00 0.00 3.02
7207 13383 7.172361 CAGCCTGCCTTTAATATTACTCTCTTC 59.828 40.741 0.00 0.00 0.00 2.87
7208 13384 6.995091 CAGCCTGCCTTTAATATTACTCTCTT 59.005 38.462 0.00 0.00 0.00 2.85
7209 13385 6.465035 CCAGCCTGCCTTTAATATTACTCTCT 60.465 42.308 0.00 0.00 0.00 3.10
7210 13386 5.703130 CCAGCCTGCCTTTAATATTACTCTC 59.297 44.000 0.00 0.00 0.00 3.20
7211 13387 5.369699 TCCAGCCTGCCTTTAATATTACTCT 59.630 40.000 0.00 0.00 0.00 3.24
7212 13388 5.470437 GTCCAGCCTGCCTTTAATATTACTC 59.530 44.000 0.00 0.00 0.00 2.59
7213 13389 5.377478 GTCCAGCCTGCCTTTAATATTACT 58.623 41.667 0.00 0.00 0.00 2.24
7214 13390 4.519350 GGTCCAGCCTGCCTTTAATATTAC 59.481 45.833 0.00 0.00 0.00 1.89
7215 13391 4.167113 TGGTCCAGCCTGCCTTTAATATTA 59.833 41.667 0.00 0.00 38.35 0.98
7216 13392 3.052944 TGGTCCAGCCTGCCTTTAATATT 60.053 43.478 0.00 0.00 38.35 1.28
7217 13393 2.513738 TGGTCCAGCCTGCCTTTAATAT 59.486 45.455 0.00 0.00 38.35 1.28
7218 13394 1.919654 TGGTCCAGCCTGCCTTTAATA 59.080 47.619 0.00 0.00 38.35 0.98
7219 13395 0.704076 TGGTCCAGCCTGCCTTTAAT 59.296 50.000 0.00 0.00 38.35 1.40
7220 13396 0.480690 TTGGTCCAGCCTGCCTTTAA 59.519 50.000 0.00 0.00 38.35 1.52
7221 13397 0.704076 ATTGGTCCAGCCTGCCTTTA 59.296 50.000 0.00 0.00 38.35 1.85
7222 13398 0.901580 CATTGGTCCAGCCTGCCTTT 60.902 55.000 0.00 0.00 38.35 3.11
7223 13399 1.304713 CATTGGTCCAGCCTGCCTT 60.305 57.895 0.00 0.00 38.35 4.35
7224 13400 2.357836 CATTGGTCCAGCCTGCCT 59.642 61.111 0.00 0.00 38.35 4.75
7225 13401 2.757099 CCATTGGTCCAGCCTGCC 60.757 66.667 0.00 0.00 38.35 4.85
7226 13402 1.751927 CTCCATTGGTCCAGCCTGC 60.752 63.158 1.86 0.00 38.35 4.85
7227 13403 0.329261 TTCTCCATTGGTCCAGCCTG 59.671 55.000 1.86 0.00 38.35 4.85
7228 13404 1.064166 CATTCTCCATTGGTCCAGCCT 60.064 52.381 1.86 0.00 38.35 4.58
7229 13405 1.341383 ACATTCTCCATTGGTCCAGCC 60.341 52.381 1.86 0.00 37.90 4.85
7230 13406 2.134789 ACATTCTCCATTGGTCCAGC 57.865 50.000 1.86 0.00 0.00 4.85
7231 13407 4.202441 CCTTACATTCTCCATTGGTCCAG 58.798 47.826 1.86 0.00 0.00 3.86
7232 13408 3.591527 ACCTTACATTCTCCATTGGTCCA 59.408 43.478 1.86 0.00 0.00 4.02
7233 13409 4.236527 ACCTTACATTCTCCATTGGTCC 57.763 45.455 1.86 0.00 0.00 4.46
7234 13410 6.389906 CAAAACCTTACATTCTCCATTGGTC 58.610 40.000 1.86 0.00 0.00 4.02
7235 13411 5.279456 GCAAAACCTTACATTCTCCATTGGT 60.279 40.000 1.86 0.00 0.00 3.67
7236 13412 5.170748 GCAAAACCTTACATTCTCCATTGG 58.829 41.667 0.00 0.00 0.00 3.16
7237 13413 4.858692 CGCAAAACCTTACATTCTCCATTG 59.141 41.667 0.00 0.00 0.00 2.82
7238 13414 4.764823 TCGCAAAACCTTACATTCTCCATT 59.235 37.500 0.00 0.00 0.00 3.16
7239 13415 4.331968 TCGCAAAACCTTACATTCTCCAT 58.668 39.130 0.00 0.00 0.00 3.41
7240 13416 3.745799 TCGCAAAACCTTACATTCTCCA 58.254 40.909 0.00 0.00 0.00 3.86
7241 13417 3.426292 GCTCGCAAAACCTTACATTCTCC 60.426 47.826 0.00 0.00 0.00 3.71
7242 13418 3.437049 AGCTCGCAAAACCTTACATTCTC 59.563 43.478 0.00 0.00 0.00 2.87
7243 13419 3.412386 AGCTCGCAAAACCTTACATTCT 58.588 40.909 0.00 0.00 0.00 2.40
7244 13420 3.188460 TGAGCTCGCAAAACCTTACATTC 59.812 43.478 9.64 0.00 0.00 2.67
7245 13421 3.146066 TGAGCTCGCAAAACCTTACATT 58.854 40.909 9.64 0.00 0.00 2.71
7246 13422 2.778299 TGAGCTCGCAAAACCTTACAT 58.222 42.857 9.64 0.00 0.00 2.29
7247 13423 2.248280 TGAGCTCGCAAAACCTTACA 57.752 45.000 9.64 0.00 0.00 2.41
7248 13424 3.619233 TTTGAGCTCGCAAAACCTTAC 57.381 42.857 9.64 0.00 35.03 2.34
7249 13425 4.356289 GTTTTTGAGCTCGCAAAACCTTA 58.644 39.130 28.05 9.47 44.68 2.69
7250 13426 3.186909 GTTTTTGAGCTCGCAAAACCTT 58.813 40.909 28.05 0.00 44.68 3.50
7251 13427 2.809446 GTTTTTGAGCTCGCAAAACCT 58.191 42.857 28.05 0.00 44.68 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.