Multiple sequence alignment - TraesCS1B01G300700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G300700 chr1B 100.000 8297 0 0 1 8297 521226287 521217991 0.000000e+00 15322.0
1 TraesCS1B01G300700 chr1D 96.013 5292 151 20 865 6119 387950791 387945523 0.000000e+00 8549.0
2 TraesCS1B01G300700 chr1D 95.447 1186 43 6 6168 7346 387945523 387944342 0.000000e+00 1881.0
3 TraesCS1B01G300700 chr1D 88.727 479 39 9 7348 7819 387944215 387943745 9.340000e-159 571.0
4 TraesCS1B01G300700 chr1D 77.504 649 100 20 5 652 387953057 387952454 1.710000e-91 348.0
5 TraesCS1B01G300700 chr1D 72.669 472 92 19 12 475 295401728 295401286 1.130000e-23 122.0
6 TraesCS1B01G300700 chr1A 95.723 4700 146 26 3158 7819 487490068 487485386 0.000000e+00 7515.0
7 TraesCS1B01G300700 chr1A 96.243 905 11 5 1886 2782 487491737 487490848 0.000000e+00 1461.0
8 TraesCS1B01G300700 chr1A 92.029 552 36 5 861 1411 487493069 487492525 0.000000e+00 769.0
9 TraesCS1B01G300700 chr1A 94.737 437 13 4 1466 1901 487492528 487492101 0.000000e+00 671.0
10 TraesCS1B01G300700 chr1A 80.968 310 50 4 35 337 487494093 487493786 3.870000e-58 237.0
11 TraesCS1B01G300700 chr1A 92.958 142 4 1 2780 2921 487490725 487490590 1.410000e-47 202.0
12 TraesCS1B01G300700 chr1A 82.022 178 29 3 147 322 487493767 487493591 1.870000e-31 148.0
13 TraesCS1B01G300700 chr3D 75.568 704 136 22 2 694 103453808 103453130 1.740000e-81 315.0
14 TraesCS1B01G300700 chr3D 95.152 165 8 0 6747 6911 87925997 87926161 2.300000e-65 261.0
15 TraesCS1B01G300700 chr7B 74.855 688 137 25 122 798 474414417 474415079 6.340000e-71 279.0
16 TraesCS1B01G300700 chr7B 75.294 255 48 6 3 243 522140145 522139892 3.170000e-19 108.0
17 TraesCS1B01G300700 chr7B 100.000 29 0 0 841 869 451173983 451173955 4.000000e-03 54.7
18 TraesCS1B01G300700 chr5A 94.118 170 9 1 6742 6911 320214237 320214405 2.970000e-64 257.0
19 TraesCS1B01G300700 chr5A 91.111 180 14 2 6736 6914 653299615 653299437 8.320000e-60 243.0
20 TraesCS1B01G300700 chr4B 94.083 169 9 1 6743 6911 532434995 532435162 1.070000e-63 255.0
21 TraesCS1B01G300700 chr7A 93.976 166 10 0 6747 6912 494786993 494786828 1.380000e-62 252.0
22 TraesCS1B01G300700 chr7A 100.000 32 0 0 840 871 628672411 628672442 8.990000e-05 60.2
23 TraesCS1B01G300700 chr2A 92.982 171 12 0 6742 6912 184561323 184561153 4.970000e-62 250.0
24 TraesCS1B01G300700 chr2A 86.111 144 16 3 7677 7818 447286155 447286014 1.440000e-32 152.0
25 TraesCS1B01G300700 chr3B 90.659 182 13 4 6743 6922 501986783 501986604 1.080000e-58 239.0
26 TraesCS1B01G300700 chr2D 84.831 178 17 8 7648 7818 337135526 337135352 3.980000e-38 171.0
27 TraesCS1B01G300700 chr5D 96.842 95 3 0 1543 1637 35954302 35954208 8.620000e-35 159.0
28 TraesCS1B01G300700 chr4D 76.068 234 38 9 56 273 503859944 503859713 1.140000e-18 106.0
29 TraesCS1B01G300700 chr2B 74.800 250 47 11 198 444 102796547 102796311 1.910000e-16 99.0
30 TraesCS1B01G300700 chr2B 89.091 55 6 0 7704 7758 714326204 714326258 1.490000e-07 69.4
31 TraesCS1B01G300700 chr7D 100.000 29 0 0 841 869 433799061 433799033 4.000000e-03 54.7
32 TraesCS1B01G300700 chr6B 100.000 29 0 0 841 869 573614842 573614814 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G300700 chr1B 521217991 521226287 8296 True 15322.000000 15322 100.000000 1 8297 1 chr1B.!!$R1 8296
1 TraesCS1B01G300700 chr1D 387943745 387953057 9312 True 2837.250000 8549 89.422750 5 7819 4 chr1D.!!$R2 7814
2 TraesCS1B01G300700 chr1A 487485386 487494093 8707 True 1571.857143 7515 90.668571 35 7819 7 chr1A.!!$R1 7784
3 TraesCS1B01G300700 chr3D 103453130 103453808 678 True 315.000000 315 75.568000 2 694 1 chr3D.!!$R1 692
4 TraesCS1B01G300700 chr7B 474414417 474415079 662 False 279.000000 279 74.855000 122 798 1 chr7B.!!$F1 676

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
316 341 0.033503 TATGGAGAGCGGAGGTGTGA 60.034 55.000 0.00 0.00 39.88 3.58 F
324 349 0.036765 GCGGAGGTGTGATGTGGTTA 60.037 55.000 0.00 0.00 0.00 2.85 F
855 1112 0.039618 ACCATTTGAGGGTCCGCATT 59.960 50.000 0.00 0.00 31.49 3.56 F
975 2740 0.106015 ATTTGAGCCCATAGCCCACC 60.106 55.000 0.00 0.00 45.47 4.61 F
2513 4677 0.742635 GTAACCAGGAGCAGCAGAGC 60.743 60.000 0.00 0.00 0.00 4.09 F
3390 6012 0.742635 TGTTGACAGCACGACAAGCA 60.743 50.000 0.00 0.00 32.12 3.91 F
3731 6367 0.027194 CGCAGGCGAAGATGTGATTG 59.973 55.000 8.15 0.00 42.83 2.67 F
3891 6527 1.003696 TGGTCATTGGCCAACGATACA 59.996 47.619 23.27 18.28 32.29 2.29 F
5568 8210 0.036732 TTCAGAGCCGCCAGATTGTT 59.963 50.000 0.00 0.00 0.00 2.83 F
6695 9338 1.532437 CTGCGCAAACATCTTGTCTCA 59.468 47.619 13.05 0.00 0.00 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1427 3198 0.321671 GGCACAGGCAGAAGAGTACA 59.678 55.000 0.00 0.00 43.71 2.90 R
1428 3199 0.391793 GGGCACAGGCAGAAGAGTAC 60.392 60.000 0.00 0.00 43.71 2.73 R
2165 4322 3.119388 TCCATGCTAGTTGAATTTGCAGC 60.119 43.478 3.26 0.00 37.07 5.25 R
2953 5248 0.628522 TGAGAGAGAGACAGGGAGGG 59.371 60.000 0.00 0.00 0.00 4.30 R
3476 6098 0.830444 TCCCACTGCTTGTCTACGGT 60.830 55.000 0.00 0.00 0.00 4.83 R
5294 7936 1.748493 GTTGGTGGTTTCTGTTCTGCA 59.252 47.619 0.00 0.00 0.00 4.41 R
5483 8125 0.533491 CTCGGTCGTTGGGGTCATTA 59.467 55.000 0.00 0.00 0.00 1.90 R
5615 8257 0.825010 CAAAGGGTGGCTGCTCACTT 60.825 55.000 16.88 12.17 37.75 3.16 R
7098 9749 0.179054 GGAGGACCCGCAATTCTACC 60.179 60.000 0.00 0.00 0.00 3.18 R
8009 10798 0.032952 GCGTGGTGGTAGTTCAGTGA 59.967 55.000 0.00 0.00 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 0.949105 GTCAACCTCCGCGAACATGT 60.949 55.000 8.23 0.00 0.00 3.21
31 32 0.604073 TCAACCTCCGCGAACATGTA 59.396 50.000 8.23 0.00 0.00 2.29
45 46 3.914426 ACATGTATTCTTTCTCCGCCT 57.086 42.857 0.00 0.00 0.00 5.52
100 101 2.426023 GCGGGAGACAGTGTTGGT 59.574 61.111 0.00 0.00 0.00 3.67
150 157 3.050275 GCGCCGGCTTCAAAGAGT 61.050 61.111 26.68 0.00 35.83 3.24
159 183 0.385974 CTTCAAAGAGTTTGCCGGCG 60.386 55.000 23.90 0.00 40.43 6.46
172 196 1.883084 CCGGCGAGCCAATCTGTAC 60.883 63.158 9.30 0.00 35.37 2.90
176 200 1.515954 CGAGCCAATCTGTACCCGT 59.484 57.895 0.00 0.00 0.00 5.28
183 208 1.204704 CAATCTGTACCCGTCTGCTCA 59.795 52.381 0.00 0.00 0.00 4.26
185 210 0.251209 TCTGTACCCGTCTGCTCACT 60.251 55.000 0.00 0.00 0.00 3.41
259 284 1.172812 GGCTGCCCGACAAGACTTTT 61.173 55.000 7.66 0.00 0.00 2.27
261 286 0.593128 CTGCCCGACAAGACTTTTGG 59.407 55.000 0.00 0.00 0.00 3.28
262 287 0.181587 TGCCCGACAAGACTTTTGGA 59.818 50.000 5.63 0.00 0.00 3.53
263 288 0.875059 GCCCGACAAGACTTTTGGAG 59.125 55.000 5.63 0.00 0.00 3.86
297 322 1.880941 GGGTGTGGTAGAAGGAGGAT 58.119 55.000 0.00 0.00 0.00 3.24
316 341 0.033503 TATGGAGAGCGGAGGTGTGA 60.034 55.000 0.00 0.00 39.88 3.58
324 349 0.036765 GCGGAGGTGTGATGTGGTTA 60.037 55.000 0.00 0.00 0.00 2.85
327 352 3.680475 GCGGAGGTGTGATGTGGTTATTA 60.680 47.826 0.00 0.00 0.00 0.98
332 357 3.369681 GGTGTGATGTGGTTATTACCCGA 60.370 47.826 0.00 0.00 44.35 5.14
340 575 3.135167 GTGGTTATTACCCGATTCCTGGA 59.865 47.826 0.00 0.00 44.35 3.86
353 588 6.320164 CCCGATTCCTGGACATGTTTAAATAA 59.680 38.462 0.00 0.00 0.00 1.40
355 590 7.148154 CCGATTCCTGGACATGTTTAAATAACA 60.148 37.037 0.00 0.00 34.31 2.41
357 592 8.877864 ATTCCTGGACATGTTTAAATAACAGA 57.122 30.769 0.00 0.00 33.18 3.41
364 599 7.148306 GGACATGTTTAAATAACAGACGGATGT 60.148 37.037 0.00 0.00 33.18 3.06
369 604 7.658167 TGTTTAAATAACAGACGGATGTGAGAA 59.342 33.333 0.00 0.00 32.52 2.87
378 613 2.290260 ACGGATGTGAGAAGCCAATCAA 60.290 45.455 0.00 0.00 0.00 2.57
425 664 3.932580 GATGGACGTGTGGCGCTCA 62.933 63.158 7.64 4.33 46.11 4.26
445 684 4.525949 GCGCCGGAGTAGGTTCCC 62.526 72.222 5.05 0.00 33.46 3.97
454 693 0.178941 AGTAGGTTCCCCGACACACT 60.179 55.000 0.00 0.00 38.71 3.55
464 703 1.157870 CCGACACACTCGCTGGTTTT 61.158 55.000 0.00 0.00 41.46 2.43
475 714 4.080526 ACTCGCTGGTTTTAATGGAGGTAT 60.081 41.667 0.00 0.00 0.00 2.73
479 718 4.196193 CTGGTTTTAATGGAGGTATGCGA 58.804 43.478 0.00 0.00 0.00 5.10
481 720 4.196971 GGTTTTAATGGAGGTATGCGAGT 58.803 43.478 0.00 0.00 0.00 4.18
484 723 5.864418 TTTAATGGAGGTATGCGAGTAGT 57.136 39.130 0.00 0.00 0.00 2.73
501 740 1.012486 AGTCGGACGCGGTTTCAATC 61.012 55.000 12.47 0.00 0.00 2.67
504 743 2.746803 GGACGCGGTTTCAATCCGG 61.747 63.158 12.47 0.00 46.90 5.14
505 744 1.738830 GACGCGGTTTCAATCCGGA 60.739 57.895 6.61 6.61 46.90 5.14
506 745 1.693083 GACGCGGTTTCAATCCGGAG 61.693 60.000 11.34 0.00 46.90 4.63
507 746 1.447140 CGCGGTTTCAATCCGGAGA 60.447 57.895 11.34 0.00 46.90 3.71
508 747 1.421410 CGCGGTTTCAATCCGGAGAG 61.421 60.000 11.34 4.74 46.90 3.20
509 748 0.108329 GCGGTTTCAATCCGGAGAGA 60.108 55.000 11.34 7.49 46.90 3.10
510 749 1.641577 CGGTTTCAATCCGGAGAGAC 58.358 55.000 11.34 8.07 43.68 3.36
511 750 1.739371 CGGTTTCAATCCGGAGAGACC 60.739 57.143 18.59 18.59 43.68 3.85
542 781 4.179361 CACAGTGGGGTGCAACAT 57.821 55.556 3.06 0.00 39.98 2.71
553 793 2.863153 GCAACATGCGACGCTCTT 59.137 55.556 22.08 6.40 31.71 2.85
576 816 0.179275 CGACACGTCGCTTCAATGTG 60.179 55.000 6.65 0.00 46.50 3.21
619 859 1.505477 GCTCTGAGCCGGCATGAATC 61.505 60.000 31.54 17.80 34.48 2.52
652 892 1.535444 TGGAGGGAAAGAGCGTGGA 60.535 57.895 0.00 0.00 0.00 4.02
664 907 2.045242 CGTGGACGAGGGAGAGGA 60.045 66.667 0.00 0.00 43.02 3.71
671 914 0.253327 ACGAGGGAGAGGATTTTGGC 59.747 55.000 0.00 0.00 0.00 4.52
723 966 0.822164 CGGTCCGGACTCCTACAAAT 59.178 55.000 32.52 0.00 0.00 2.32
744 1001 1.551452 CCCCGGTTTGCTGGAAAATA 58.449 50.000 0.00 0.00 43.97 1.40
748 1005 2.030628 CCGGTTTGCTGGAAAATAACGT 60.031 45.455 0.00 0.00 43.97 3.99
798 1055 4.862902 CCATGTTGGATGGTAAAACACA 57.137 40.909 0.00 0.00 40.96 3.72
806 1063 3.606687 GATGGTAAAACACATCCGGACT 58.393 45.455 6.12 0.00 37.98 3.85
809 1066 2.740447 GGTAAAACACATCCGGACTGTC 59.260 50.000 6.12 0.00 0.00 3.51
826 1083 2.356075 CCGGTTCGCACGGTAACA 60.356 61.111 0.00 0.00 46.03 2.41
829 1086 2.030958 GGTTCGCACGGTAACAGGG 61.031 63.158 0.00 0.00 0.00 4.45
837 1094 0.109153 ACGGTAACAGGGGGTTTGAC 59.891 55.000 0.00 0.00 40.96 3.18
838 1095 0.607217 CGGTAACAGGGGGTTTGACC 60.607 60.000 0.00 0.00 40.96 4.02
839 1096 0.479378 GGTAACAGGGGGTTTGACCA 59.521 55.000 0.00 0.00 41.02 4.02
841 1098 2.492010 GGTAACAGGGGGTTTGACCATT 60.492 50.000 0.00 0.00 41.02 3.16
842 1099 2.487746 AACAGGGGGTTTGACCATTT 57.512 45.000 0.00 0.00 41.02 2.32
844 1101 1.219213 ACAGGGGGTTTGACCATTTGA 59.781 47.619 0.00 0.00 41.02 2.69
846 1103 1.203174 AGGGGGTTTGACCATTTGAGG 60.203 52.381 0.00 0.00 41.02 3.86
847 1104 1.266178 GGGGTTTGACCATTTGAGGG 58.734 55.000 0.00 0.00 41.02 4.30
848 1105 1.482365 GGGGTTTGACCATTTGAGGGT 60.482 52.381 0.00 0.00 41.02 4.34
854 1111 1.691219 ACCATTTGAGGGTCCGCAT 59.309 52.632 0.00 0.00 31.49 4.73
855 1112 0.039618 ACCATTTGAGGGTCCGCATT 59.960 50.000 0.00 0.00 31.49 3.56
856 1113 0.457035 CCATTTGAGGGTCCGCATTG 59.543 55.000 0.00 0.00 0.00 2.82
873 2630 4.374399 GCATTGGAGATGCCCTAAATTTG 58.626 43.478 0.00 0.00 39.01 2.32
951 2716 1.406065 ATGCTCTCAGTCCCCATCCG 61.406 60.000 0.00 0.00 0.00 4.18
974 2739 1.780503 AATTTGAGCCCATAGCCCAC 58.219 50.000 0.00 0.00 45.47 4.61
975 2740 0.106015 ATTTGAGCCCATAGCCCACC 60.106 55.000 0.00 0.00 45.47 4.61
1076 2841 3.080121 CCGCCTGCTCTCCCTCTT 61.080 66.667 0.00 0.00 0.00 2.85
1089 2854 2.047274 CTCTTCGCCCGCCTGAAA 60.047 61.111 0.00 0.00 0.00 2.69
1126 2891 2.839632 ATCTCCGCCGATCCTGCA 60.840 61.111 3.13 0.00 0.00 4.41
1180 2945 4.772231 TCTTCGCCCTACCCCGCT 62.772 66.667 0.00 0.00 0.00 5.52
1308 3073 3.706055 CCGATTGGGTATGTCAGGG 57.294 57.895 0.00 0.00 0.00 4.45
1334 3099 7.712264 TTAACCGATCGAGTTCTTTTTGTTA 57.288 32.000 18.66 9.21 0.00 2.41
1373 3141 7.833285 ATGTTTTGGAGTATGTGGTAAAGTT 57.167 32.000 0.00 0.00 0.00 2.66
1396 3164 1.324383 GTGAAATCGTGGTTTGGGGT 58.676 50.000 0.00 0.00 0.00 4.95
1457 3235 1.635487 TGCCTGTGCCCTAAGAAGATT 59.365 47.619 0.00 0.00 36.33 2.40
1470 3248 6.995091 CCCTAAGAAGATTATGGTTCCTCTTG 59.005 42.308 0.00 0.00 0.00 3.02
1525 3304 7.185318 TGCAGAATCATTATGGGAAAACAAT 57.815 32.000 0.00 0.00 0.00 2.71
1645 3424 4.307032 AAACATCAAGGTATGCCTCTGT 57.693 40.909 1.55 4.89 46.33 3.41
1656 3435 3.737559 ATGCCTCTGTTGATTGGGTTA 57.262 42.857 0.00 0.00 0.00 2.85
1712 3491 8.674607 CAGTAGTTGGTCTTTTAGTTTTCAGTT 58.325 33.333 0.00 0.00 0.00 3.16
1761 3540 4.612264 AGAATTGCTTTCATGCTTTGGT 57.388 36.364 0.00 0.00 36.75 3.67
1766 3545 7.668509 GAATTGCTTTCATGCTTTGGTGACAA 61.669 38.462 0.00 0.00 40.49 3.18
1794 3573 7.444299 AGATTGCACCATCAATTAACTTTGTT 58.556 30.769 1.40 0.00 36.85 2.83
1795 3574 7.933033 AGATTGCACCATCAATTAACTTTGTTT 59.067 29.630 1.40 0.00 36.85 2.83
1796 3575 9.202273 GATTGCACCATCAATTAACTTTGTTTA 57.798 29.630 0.00 0.00 36.85 2.01
1797 3576 8.948631 TTGCACCATCAATTAACTTTGTTTAA 57.051 26.923 0.00 0.00 0.00 1.52
1798 3577 8.586570 TGCACCATCAATTAACTTTGTTTAAG 57.413 30.769 0.00 0.00 39.87 1.85
1799 3578 8.417106 TGCACCATCAATTAACTTTGTTTAAGA 58.583 29.630 0.00 0.00 37.30 2.10
1800 3579 8.915654 GCACCATCAATTAACTTTGTTTAAGAG 58.084 33.333 0.00 0.00 37.30 2.85
1873 3652 3.545703 ACAGCAAAGTAGAGTTTGTGCT 58.454 40.909 10.67 1.97 42.83 4.40
1884 3663 5.682943 AGAGTTTGTGCTTGCGTTAATTA 57.317 34.783 0.00 0.00 0.00 1.40
1927 4083 3.806316 AGAAATTACGAAACACTGCCG 57.194 42.857 0.00 0.00 0.00 5.69
2165 4322 5.574891 TGTTTGGTAATTCATGATTCCCG 57.425 39.130 0.00 0.00 0.00 5.14
2263 4420 3.754850 TGTAACTAGAGCAGTGTTAGCGA 59.245 43.478 0.00 0.00 37.63 4.93
2461 4625 2.755655 ACCTCTCATTGGTCTCGTACTG 59.244 50.000 0.00 0.00 31.03 2.74
2513 4677 0.742635 GTAACCAGGAGCAGCAGAGC 60.743 60.000 0.00 0.00 0.00 4.09
2536 4700 5.462398 GCATTAACACGTCTATCTTGGTAGG 59.538 44.000 0.00 0.00 0.00 3.18
2869 5164 6.518493 ACAGAATCATGCATTGACTTTTGTT 58.482 32.000 0.00 0.00 37.11 2.83
2921 5216 4.161565 AGTTCTGGCGGTACTATCAAATCA 59.838 41.667 3.52 0.00 0.00 2.57
3009 5304 7.387673 CACCACTAGAAATATTGTTGTCACTCA 59.612 37.037 0.00 0.00 0.00 3.41
3074 5696 9.787435 AAGTTAAATGGTGTATCTCAACTGTTA 57.213 29.630 0.00 0.00 34.34 2.41
3078 5700 5.554437 TGGTGTATCTCAACTGTTAACCA 57.446 39.130 2.48 0.00 34.34 3.67
3390 6012 0.742635 TGTTGACAGCACGACAAGCA 60.743 50.000 0.00 0.00 32.12 3.91
3476 6098 5.761234 ACACGCTTTAGAAGTTATGGTGAAA 59.239 36.000 0.00 0.00 0.00 2.69
3526 6162 0.986527 TGCACATGACCATCACTCCT 59.013 50.000 0.00 0.00 0.00 3.69
3682 6318 4.678840 GCTGCCATCTCCAACAATTTAAGG 60.679 45.833 0.00 0.00 0.00 2.69
3729 6365 0.391661 AACGCAGGCGAAGATGTGAT 60.392 50.000 21.62 0.00 42.83 3.06
3731 6367 0.027194 CGCAGGCGAAGATGTGATTG 59.973 55.000 8.15 0.00 42.83 2.67
3891 6527 1.003696 TGGTCATTGGCCAACGATACA 59.996 47.619 23.27 18.28 32.29 2.29
4004 6640 5.147162 CCACAAGTCGATTAACTCTTTTGC 58.853 41.667 0.00 0.00 0.00 3.68
4587 7225 8.801715 TCTGTTTTTCTCATAGTTGCATTTTC 57.198 30.769 0.00 0.00 0.00 2.29
4658 7296 5.023514 AGGGGTTTCCTATTTTTCATGGT 57.976 39.130 0.00 0.00 45.98 3.55
4719 7357 2.627945 TGTGCGACTGTGAGTTCTTTT 58.372 42.857 0.00 0.00 0.00 2.27
5033 7675 9.466497 TCATTGTCTTATCTTCTTTAGCCAAAT 57.534 29.630 0.00 0.00 0.00 2.32
5085 7727 3.844211 TGTGAATGTTCTAGCCCCTACTT 59.156 43.478 0.00 0.00 0.00 2.24
5132 7774 7.252708 TCATGATGAGCACACATTGTAAATTC 58.747 34.615 0.00 0.00 0.00 2.17
5294 7936 5.801380 ACGTATTAGGACACCAAAGAATGT 58.199 37.500 0.00 0.00 0.00 2.71
5301 7943 3.550842 GGACACCAAAGAATGTGCAGAAC 60.551 47.826 0.00 0.00 37.15 3.01
5445 8087 1.500474 TGGAGAGGTGAGCCATAAGG 58.500 55.000 0.00 0.00 37.19 2.69
5512 8154 0.249699 AACGACCGAGTGAACATGCA 60.250 50.000 0.00 0.00 0.00 3.96
5568 8210 0.036732 TTCAGAGCCGCCAGATTGTT 59.963 50.000 0.00 0.00 0.00 2.83
5707 8349 3.893200 TCACCGTATCTGGGTAACATAGG 59.107 47.826 0.00 0.00 35.58 2.57
5770 8412 3.225798 GTTTGGCTGGCTGTGGCA 61.226 61.111 2.00 0.00 40.87 4.92
5798 8440 4.897509 AGATTTGCTGGATATCGGATCA 57.102 40.909 0.00 0.00 0.00 2.92
5810 8452 5.163364 GGATATCGGATCAGTGGATAAGCAT 60.163 44.000 0.00 0.00 32.67 3.79
6004 8646 4.844349 AGTACAGGTGGATGTAAATGCT 57.156 40.909 0.00 0.00 37.41 3.79
6118 8760 2.350522 GACCTGCATGTGGTTAGACTG 58.649 52.381 12.56 0.00 38.03 3.51
6285 8928 6.542821 AGGTTGAAATTCTAATCAGTGGACA 58.457 36.000 0.00 0.00 0.00 4.02
6424 9067 9.916397 GATGTCAAAAAGGTATATTGTTCTACG 57.084 33.333 0.00 0.00 0.00 3.51
6451 9094 7.944729 ACTTTTCTTGAATATGTATGCAGGT 57.055 32.000 0.00 0.00 0.00 4.00
6583 9226 8.367660 TCTTTGTAGATAAGAATGTCCAGAGT 57.632 34.615 0.00 0.00 0.00 3.24
6652 9295 3.077359 GGACATTGACAGGGTCTTTGAG 58.923 50.000 8.05 0.00 33.15 3.02
6695 9338 1.532437 CTGCGCAAACATCTTGTCTCA 59.468 47.619 13.05 0.00 0.00 3.27
6975 9626 5.592282 TGGTCAAACTAGTTGCAGATTTTCA 59.408 36.000 9.34 3.88 37.13 2.69
7091 9742 9.327628 GTTCTTTGTTCTTACTAGGATATTCCC 57.672 37.037 0.00 0.00 37.19 3.97
7109 9760 0.884704 CCATCGGGGGTAGAATTGCG 60.885 60.000 0.00 0.00 0.00 4.85
7130 9781 3.372440 GGTCCTCCACCATCAGAAAAT 57.628 47.619 0.00 0.00 45.98 1.82
7263 9914 7.545615 TCACAACTGTGTATAACATCATCTGTC 59.454 37.037 9.56 0.00 45.76 3.51
7314 9965 1.421410 GATTGCGCCGTCGACTTGAT 61.421 55.000 14.70 0.00 38.10 2.57
7346 9997 0.825010 GCCTGGGCATGGAGTAATGG 60.825 60.000 6.75 0.00 41.49 3.16
7390 10166 1.726853 GTCTGCGAACCTGTAATGCT 58.273 50.000 0.00 0.00 0.00 3.79
7446 10222 1.270785 TGCGTGTTGTGGACATGATCT 60.271 47.619 0.00 0.00 46.20 2.75
7458 10234 3.755378 GGACATGATCTTGCTGTGTTTCT 59.245 43.478 8.45 0.00 0.00 2.52
7485 10265 1.139058 ACTCGCTTCCTGTTTCTGTGT 59.861 47.619 0.00 0.00 0.00 3.72
7521 10301 6.859017 TGTATATATTGATGATGTACGGCGT 58.141 36.000 19.64 19.64 0.00 5.68
7573 10353 8.644318 ACTCCGTGATTGTAGTGTTAATTATC 57.356 34.615 0.00 0.00 0.00 1.75
7577 10357 8.969267 CCGTGATTGTAGTGTTAATTATCTCTC 58.031 37.037 2.24 0.00 0.00 3.20
7578 10358 9.737427 CGTGATTGTAGTGTTAATTATCTCTCT 57.263 33.333 2.24 0.00 0.00 3.10
7611 10392 8.110743 TCTCTCCTACTTCCTACATAAGGTTA 57.889 38.462 0.00 0.00 46.62 2.85
7612 10393 7.997803 TCTCTCCTACTTCCTACATAAGGTTAC 59.002 40.741 0.00 0.00 46.62 2.50
7617 10398 4.702131 ACTTCCTACATAAGGTTACGTCGT 59.298 41.667 2.21 2.21 46.62 4.34
7618 10399 5.183904 ACTTCCTACATAAGGTTACGTCGTT 59.816 40.000 1.78 0.00 46.62 3.85
7630 10411 0.323542 ACGTCGTTCATCCCTCCTCT 60.324 55.000 0.00 0.00 0.00 3.69
7660 10446 2.442262 AGGTTTTCTCCTCCCCTCTT 57.558 50.000 0.00 0.00 31.32 2.85
7661 10447 1.988846 AGGTTTTCTCCTCCCCTCTTG 59.011 52.381 0.00 0.00 31.32 3.02
7677 10463 5.511373 CCCCTCTTGGTTTTGATCTTTTTCC 60.511 44.000 0.00 0.00 0.00 3.13
7700 10487 5.392811 CCTCTCATCTCTGAATTTTTGCACC 60.393 44.000 0.00 0.00 0.00 5.01
7701 10488 4.154737 TCTCATCTCTGAATTTTTGCACCG 59.845 41.667 0.00 0.00 0.00 4.94
7703 10490 2.582052 TCTCTGAATTTTTGCACCGGT 58.418 42.857 0.00 0.00 0.00 5.28
7733 10520 3.443045 CCGCATCAACTGGCCCAC 61.443 66.667 0.00 0.00 0.00 4.61
7736 10523 2.048603 GCATCAACTGGCCCACCTC 61.049 63.158 0.00 0.00 36.63 3.85
7742 10529 2.094675 CAACTGGCCCACCTCTTATTG 58.905 52.381 0.00 0.00 36.63 1.90
7749 10536 3.542648 GCCCACCTCTTATTGACTTACC 58.457 50.000 0.00 0.00 0.00 2.85
7758 10545 9.901172 ACCTCTTATTGACTTACCGAATAAAAT 57.099 29.630 0.00 0.00 0.00 1.82
7802 10591 7.401782 ACCAATAAATGCTTACCAAATAAGGGT 59.598 33.333 0.00 0.00 40.74 4.34
7803 10592 8.264347 CCAATAAATGCTTACCAAATAAGGGTT 58.736 33.333 0.00 0.00 40.74 4.11
7820 10609 6.630203 AAGGGTTTACCAAATAAAATCCCC 57.370 37.500 0.69 0.00 38.82 4.81
7821 10610 5.666738 AGGGTTTACCAAATAAAATCCCCA 58.333 37.500 0.69 0.00 38.82 4.96
7822 10611 6.276248 AGGGTTTACCAAATAAAATCCCCAT 58.724 36.000 0.69 0.00 38.82 4.00
7823 10612 6.157820 AGGGTTTACCAAATAAAATCCCCATG 59.842 38.462 0.69 0.00 38.82 3.66
7824 10613 6.353323 GGTTTACCAAATAAAATCCCCATGG 58.647 40.000 4.14 4.14 34.50 3.66
7825 10614 5.622346 TTACCAAATAAAATCCCCATGGC 57.378 39.130 6.09 0.00 0.00 4.40
7826 10615 3.458831 ACCAAATAAAATCCCCATGGCA 58.541 40.909 6.09 0.00 0.00 4.92
7827 10616 3.848975 ACCAAATAAAATCCCCATGGCAA 59.151 39.130 6.09 0.00 0.00 4.52
7828 10617 4.198530 CCAAATAAAATCCCCATGGCAAC 58.801 43.478 6.09 0.00 0.00 4.17
7839 10628 4.211893 TGGCAACACATGGGCAAT 57.788 50.000 0.00 0.00 46.17 3.56
7840 10629 2.449870 TGGCAACACATGGGCAATT 58.550 47.368 0.00 0.00 46.17 2.32
7841 10630 1.637338 TGGCAACACATGGGCAATTA 58.363 45.000 0.00 0.00 46.17 1.40
7842 10631 2.186243 TGGCAACACATGGGCAATTAT 58.814 42.857 0.00 0.00 46.17 1.28
7843 10632 2.570752 TGGCAACACATGGGCAATTATT 59.429 40.909 0.00 0.00 46.17 1.40
7844 10633 3.197265 GGCAACACATGGGCAATTATTC 58.803 45.455 0.00 0.00 0.00 1.75
7845 10634 3.118665 GGCAACACATGGGCAATTATTCT 60.119 43.478 0.00 0.00 0.00 2.40
7846 10635 4.099266 GGCAACACATGGGCAATTATTCTA 59.901 41.667 0.00 0.00 0.00 2.10
7847 10636 5.284079 GCAACACATGGGCAATTATTCTAG 58.716 41.667 0.00 0.00 0.00 2.43
7848 10637 5.163519 GCAACACATGGGCAATTATTCTAGT 60.164 40.000 0.00 0.00 0.00 2.57
7849 10638 6.039270 GCAACACATGGGCAATTATTCTAGTA 59.961 38.462 0.00 0.00 0.00 1.82
7850 10639 7.642669 CAACACATGGGCAATTATTCTAGTAG 58.357 38.462 0.00 0.00 0.00 2.57
7851 10640 7.136822 ACACATGGGCAATTATTCTAGTAGA 57.863 36.000 0.00 0.00 0.00 2.59
7852 10641 7.220030 ACACATGGGCAATTATTCTAGTAGAG 58.780 38.462 0.00 0.00 0.00 2.43
7853 10642 7.147479 ACACATGGGCAATTATTCTAGTAGAGT 60.147 37.037 0.00 0.00 0.00 3.24
7854 10643 7.716998 CACATGGGCAATTATTCTAGTAGAGTT 59.283 37.037 0.00 0.00 0.00 3.01
7855 10644 8.275040 ACATGGGCAATTATTCTAGTAGAGTTT 58.725 33.333 0.00 0.00 0.00 2.66
7856 10645 9.778741 CATGGGCAATTATTCTAGTAGAGTTTA 57.221 33.333 0.00 0.00 0.00 2.01
7872 10661 8.101419 AGTAGAGTTTAAACATGAGGTAAAGGG 58.899 37.037 20.06 0.00 0.00 3.95
7873 10662 6.849151 AGAGTTTAAACATGAGGTAAAGGGT 58.151 36.000 20.06 0.00 0.00 4.34
7874 10663 6.940867 AGAGTTTAAACATGAGGTAAAGGGTC 59.059 38.462 20.06 4.09 0.00 4.46
7875 10664 5.704053 AGTTTAAACATGAGGTAAAGGGTCG 59.296 40.000 20.06 0.00 0.00 4.79
7876 10665 5.486735 TTAAACATGAGGTAAAGGGTCGA 57.513 39.130 0.00 0.00 0.00 4.20
7877 10666 4.360951 AAACATGAGGTAAAGGGTCGAA 57.639 40.909 0.00 0.00 0.00 3.71
7878 10667 4.360951 AACATGAGGTAAAGGGTCGAAA 57.639 40.909 0.00 0.00 0.00 3.46
7879 10668 4.360951 ACATGAGGTAAAGGGTCGAAAA 57.639 40.909 0.00 0.00 0.00 2.29
7880 10669 4.918588 ACATGAGGTAAAGGGTCGAAAAT 58.081 39.130 0.00 0.00 0.00 1.82
7881 10670 4.700213 ACATGAGGTAAAGGGTCGAAAATG 59.300 41.667 0.00 0.00 0.00 2.32
7882 10671 4.360951 TGAGGTAAAGGGTCGAAAATGT 57.639 40.909 0.00 0.00 0.00 2.71
7883 10672 5.486735 TGAGGTAAAGGGTCGAAAATGTA 57.513 39.130 0.00 0.00 0.00 2.29
7884 10673 5.240121 TGAGGTAAAGGGTCGAAAATGTAC 58.760 41.667 0.00 0.00 0.00 2.90
7885 10674 4.582869 AGGTAAAGGGTCGAAAATGTACC 58.417 43.478 7.46 7.46 0.00 3.34
7888 10677 3.179925 GGGTCGAAAATGTACCCCC 57.820 57.895 0.00 0.00 46.12 5.40
7889 10678 0.328926 GGGTCGAAAATGTACCCCCA 59.671 55.000 0.00 0.00 46.12 4.96
7890 10679 1.272037 GGGTCGAAAATGTACCCCCAA 60.272 52.381 0.00 0.00 46.12 4.12
7891 10680 2.622190 GGGTCGAAAATGTACCCCCAAT 60.622 50.000 0.00 0.00 46.12 3.16
7892 10681 2.686405 GGTCGAAAATGTACCCCCAATC 59.314 50.000 0.00 0.00 0.00 2.67
7893 10682 2.353579 GTCGAAAATGTACCCCCAATCG 59.646 50.000 0.00 0.00 0.00 3.34
7894 10683 2.236644 TCGAAAATGTACCCCCAATCGA 59.763 45.455 0.00 0.00 0.00 3.59
7895 10684 3.118186 TCGAAAATGTACCCCCAATCGAT 60.118 43.478 0.00 0.00 0.00 3.59
7896 10685 3.003275 CGAAAATGTACCCCCAATCGATG 59.997 47.826 0.00 0.00 0.00 3.84
7897 10686 1.981256 AATGTACCCCCAATCGATGC 58.019 50.000 0.00 0.00 0.00 3.91
7898 10687 0.843309 ATGTACCCCCAATCGATGCA 59.157 50.000 0.00 0.00 0.00 3.96
7899 10688 0.621082 TGTACCCCCAATCGATGCAA 59.379 50.000 0.00 0.00 0.00 4.08
7900 10689 1.004862 TGTACCCCCAATCGATGCAAA 59.995 47.619 0.00 0.00 0.00 3.68
7901 10690 2.096248 GTACCCCCAATCGATGCAAAA 58.904 47.619 0.00 0.00 0.00 2.44
7902 10691 0.894835 ACCCCCAATCGATGCAAAAC 59.105 50.000 0.00 0.00 0.00 2.43
7903 10692 0.175531 CCCCCAATCGATGCAAAACC 59.824 55.000 0.00 0.00 0.00 3.27
7904 10693 0.175531 CCCCAATCGATGCAAAACCC 59.824 55.000 0.00 0.00 0.00 4.11
7905 10694 1.185315 CCCAATCGATGCAAAACCCT 58.815 50.000 0.00 0.00 0.00 4.34
7906 10695 1.135024 CCCAATCGATGCAAAACCCTG 60.135 52.381 0.00 0.00 0.00 4.45
7907 10696 1.135024 CCAATCGATGCAAAACCCTGG 60.135 52.381 0.00 0.00 0.00 4.45
7908 10697 1.545582 CAATCGATGCAAAACCCTGGT 59.454 47.619 0.00 0.00 0.00 4.00
7909 10698 1.923356 ATCGATGCAAAACCCTGGTT 58.077 45.000 0.00 0.00 40.45 3.67
7910 10699 2.570415 TCGATGCAAAACCCTGGTTA 57.430 45.000 1.21 0.00 37.35 2.85
7911 10700 2.156098 TCGATGCAAAACCCTGGTTAC 58.844 47.619 1.21 0.00 37.35 2.50
7912 10701 1.883275 CGATGCAAAACCCTGGTTACA 59.117 47.619 1.21 2.24 37.35 2.41
7913 10702 2.294791 CGATGCAAAACCCTGGTTACAA 59.705 45.455 1.21 0.00 37.35 2.41
7914 10703 3.243569 CGATGCAAAACCCTGGTTACAAA 60.244 43.478 1.21 0.00 37.35 2.83
7915 10704 4.698575 GATGCAAAACCCTGGTTACAAAA 58.301 39.130 1.21 0.00 37.35 2.44
7916 10705 4.553330 TGCAAAACCCTGGTTACAAAAA 57.447 36.364 1.21 0.00 37.35 1.94
7917 10706 5.104259 TGCAAAACCCTGGTTACAAAAAT 57.896 34.783 1.21 0.00 37.35 1.82
7918 10707 5.501156 TGCAAAACCCTGGTTACAAAAATT 58.499 33.333 1.21 0.00 37.35 1.82
7919 10708 5.586643 TGCAAAACCCTGGTTACAAAAATTC 59.413 36.000 1.21 0.00 37.35 2.17
7920 10709 5.586643 GCAAAACCCTGGTTACAAAAATTCA 59.413 36.000 1.21 0.00 37.35 2.57
7921 10710 6.094186 GCAAAACCCTGGTTACAAAAATTCAA 59.906 34.615 1.21 0.00 37.35 2.69
7922 10711 7.678454 GCAAAACCCTGGTTACAAAAATTCAAG 60.678 37.037 1.21 0.00 37.35 3.02
7923 10712 5.545063 ACCCTGGTTACAAAAATTCAAGG 57.455 39.130 0.00 0.00 0.00 3.61
7924 10713 4.202315 ACCCTGGTTACAAAAATTCAAGGC 60.202 41.667 0.00 0.00 0.00 4.35
7925 10714 4.202305 CCCTGGTTACAAAAATTCAAGGCA 60.202 41.667 0.00 0.00 0.00 4.75
7926 10715 4.749598 CCTGGTTACAAAAATTCAAGGCAC 59.250 41.667 0.00 0.00 0.00 5.01
7944 10733 6.567602 AGGCACTTATGGATCTTTAGAGTT 57.432 37.500 0.00 0.00 27.25 3.01
7945 10734 6.352516 AGGCACTTATGGATCTTTAGAGTTG 58.647 40.000 0.00 0.00 27.25 3.16
7946 10735 6.156949 AGGCACTTATGGATCTTTAGAGTTGA 59.843 38.462 0.00 0.00 27.25 3.18
7947 10736 6.481644 GGCACTTATGGATCTTTAGAGTTGAG 59.518 42.308 0.00 0.00 0.00 3.02
7948 10737 7.044798 GCACTTATGGATCTTTAGAGTTGAGT 58.955 38.462 0.00 0.00 0.00 3.41
7949 10738 7.550906 GCACTTATGGATCTTTAGAGTTGAGTT 59.449 37.037 0.00 0.00 0.00 3.01
7950 10739 9.442047 CACTTATGGATCTTTAGAGTTGAGTTT 57.558 33.333 0.00 0.00 0.00 2.66
7953 10742 9.793259 TTATGGATCTTTAGAGTTGAGTTTTGT 57.207 29.630 0.00 0.00 0.00 2.83
7954 10743 8.697507 ATGGATCTTTAGAGTTGAGTTTTGTT 57.302 30.769 0.00 0.00 0.00 2.83
7955 10744 8.154649 TGGATCTTTAGAGTTGAGTTTTGTTC 57.845 34.615 0.00 0.00 0.00 3.18
7956 10745 7.773224 TGGATCTTTAGAGTTGAGTTTTGTTCA 59.227 33.333 0.00 0.00 0.00 3.18
7957 10746 8.621286 GGATCTTTAGAGTTGAGTTTTGTTCAA 58.379 33.333 0.00 0.00 32.44 2.69
7964 10753 5.185110 GTTGAGTTTTGTTCAACCGTTTG 57.815 39.130 6.82 0.00 45.40 2.93
7965 10754 4.506886 TGAGTTTTGTTCAACCGTTTGT 57.493 36.364 0.00 0.00 34.02 2.83
7966 10755 4.477780 TGAGTTTTGTTCAACCGTTTGTC 58.522 39.130 0.00 0.00 34.02 3.18
7967 10756 4.216687 TGAGTTTTGTTCAACCGTTTGTCT 59.783 37.500 0.00 0.00 34.02 3.41
7968 10757 5.411977 TGAGTTTTGTTCAACCGTTTGTCTA 59.588 36.000 0.00 0.00 34.02 2.59
7969 10758 5.875930 AGTTTTGTTCAACCGTTTGTCTAG 58.124 37.500 0.00 0.00 34.02 2.43
7970 10759 5.413523 AGTTTTGTTCAACCGTTTGTCTAGT 59.586 36.000 0.00 0.00 34.02 2.57
7971 10760 5.473796 TTTGTTCAACCGTTTGTCTAGTC 57.526 39.130 0.00 0.00 34.02 2.59
7972 10761 4.126208 TGTTCAACCGTTTGTCTAGTCA 57.874 40.909 0.00 0.00 34.02 3.41
7973 10762 4.116961 TGTTCAACCGTTTGTCTAGTCAG 58.883 43.478 0.00 0.00 34.02 3.51
7974 10763 2.750948 TCAACCGTTTGTCTAGTCAGC 58.249 47.619 0.00 0.00 34.02 4.26
7975 10764 2.364324 TCAACCGTTTGTCTAGTCAGCT 59.636 45.455 0.00 0.00 34.02 4.24
7976 10765 3.570975 TCAACCGTTTGTCTAGTCAGCTA 59.429 43.478 0.00 0.00 34.02 3.32
7977 10766 4.038282 TCAACCGTTTGTCTAGTCAGCTAA 59.962 41.667 0.00 0.00 34.02 3.09
7978 10767 4.595762 ACCGTTTGTCTAGTCAGCTAAA 57.404 40.909 0.00 0.00 0.00 1.85
7979 10768 4.304939 ACCGTTTGTCTAGTCAGCTAAAC 58.695 43.478 0.00 0.00 0.00 2.01
7980 10769 3.678548 CCGTTTGTCTAGTCAGCTAAACC 59.321 47.826 0.00 0.00 30.19 3.27
7981 10770 3.364023 CGTTTGTCTAGTCAGCTAAACCG 59.636 47.826 0.00 0.00 30.19 4.44
7982 10771 3.587797 TTGTCTAGTCAGCTAAACCGG 57.412 47.619 0.00 0.00 0.00 5.28
7983 10772 1.822990 TGTCTAGTCAGCTAAACCGGG 59.177 52.381 6.32 0.00 0.00 5.73
7984 10773 0.822164 TCTAGTCAGCTAAACCGGGC 59.178 55.000 6.32 0.00 0.00 6.13
7985 10774 0.527817 CTAGTCAGCTAAACCGGGCG 60.528 60.000 6.32 0.00 0.00 6.13
7986 10775 0.966875 TAGTCAGCTAAACCGGGCGA 60.967 55.000 6.32 0.00 0.00 5.54
7987 10776 1.810030 GTCAGCTAAACCGGGCGAG 60.810 63.158 6.32 0.00 0.00 5.03
7988 10777 2.511600 CAGCTAAACCGGGCGAGG 60.512 66.667 6.32 0.00 37.30 4.63
7995 10784 3.542304 ACCGGGCGAGGTTATACC 58.458 61.111 6.32 0.00 43.00 2.73
8005 10794 3.180984 GGTTATACCTCGCTCGCTG 57.819 57.895 0.00 0.00 34.73 5.18
8006 10795 0.384669 GGTTATACCTCGCTCGCTGT 59.615 55.000 0.00 0.00 34.73 4.40
8007 10796 1.478137 GTTATACCTCGCTCGCTGTG 58.522 55.000 0.00 0.00 0.00 3.66
8008 10797 0.248907 TTATACCTCGCTCGCTGTGC 60.249 55.000 0.00 0.00 0.00 4.57
8009 10798 1.101635 TATACCTCGCTCGCTGTGCT 61.102 55.000 0.00 0.00 0.00 4.40
8010 10799 2.343163 ATACCTCGCTCGCTGTGCTC 62.343 60.000 0.00 0.00 0.00 4.26
8011 10800 4.426112 CCTCGCTCGCTGTGCTCA 62.426 66.667 0.00 0.00 0.00 4.26
8012 10801 3.177920 CTCGCTCGCTGTGCTCAC 61.178 66.667 0.00 0.00 0.00 3.51
8013 10802 3.623486 CTCGCTCGCTGTGCTCACT 62.623 63.158 1.47 0.00 0.00 3.41
8014 10803 3.476646 CGCTCGCTGTGCTCACTG 61.477 66.667 1.47 2.29 0.00 3.66
8015 10804 2.048784 GCTCGCTGTGCTCACTGA 60.049 61.111 10.46 1.73 32.81 3.41
8016 10805 1.665916 GCTCGCTGTGCTCACTGAA 60.666 57.895 10.46 0.00 32.81 3.02
8017 10806 1.895280 GCTCGCTGTGCTCACTGAAC 61.895 60.000 10.46 0.00 32.81 3.18
8018 10807 0.319383 CTCGCTGTGCTCACTGAACT 60.319 55.000 10.46 0.00 32.81 3.01
8019 10808 0.958822 TCGCTGTGCTCACTGAACTA 59.041 50.000 10.46 0.00 32.81 2.24
8020 10809 1.063806 CGCTGTGCTCACTGAACTAC 58.936 55.000 10.46 0.00 32.81 2.73
8021 10810 1.433534 GCTGTGCTCACTGAACTACC 58.566 55.000 10.46 0.00 32.81 3.18
8022 10811 1.270305 GCTGTGCTCACTGAACTACCA 60.270 52.381 10.46 0.00 32.81 3.25
8023 10812 2.408050 CTGTGCTCACTGAACTACCAC 58.592 52.381 1.47 0.00 32.81 4.16
8024 10813 1.070134 TGTGCTCACTGAACTACCACC 59.930 52.381 1.47 0.00 0.00 4.61
8025 10814 1.070134 GTGCTCACTGAACTACCACCA 59.930 52.381 0.00 0.00 0.00 4.17
8026 10815 1.070134 TGCTCACTGAACTACCACCAC 59.930 52.381 0.00 0.00 0.00 4.16
8027 10816 1.935300 GCTCACTGAACTACCACCACG 60.935 57.143 0.00 0.00 0.00 4.94
8028 10817 0.032952 TCACTGAACTACCACCACGC 59.967 55.000 0.00 0.00 0.00 5.34
8029 10818 0.949105 CACTGAACTACCACCACGCC 60.949 60.000 0.00 0.00 0.00 5.68
8030 10819 1.736645 CTGAACTACCACCACGCCG 60.737 63.158 0.00 0.00 0.00 6.46
8031 10820 3.116531 GAACTACCACCACGCCGC 61.117 66.667 0.00 0.00 0.00 6.53
8032 10821 4.692475 AACTACCACCACGCCGCC 62.692 66.667 0.00 0.00 0.00 6.13
8034 10823 4.814294 CTACCACCACGCCGCCTC 62.814 72.222 0.00 0.00 0.00 4.70
8040 10829 4.697756 CCACGCCGCCTCAAGGAA 62.698 66.667 0.00 0.00 37.39 3.36
8041 10830 3.423154 CACGCCGCCTCAAGGAAC 61.423 66.667 0.00 0.00 37.39 3.62
8047 10836 4.035102 GCCTCAAGGAACGCCCCT 62.035 66.667 0.00 0.00 38.42 4.79
8048 10837 2.666098 GCCTCAAGGAACGCCCCTA 61.666 63.158 0.00 0.00 34.95 3.53
8049 10838 1.522569 CCTCAAGGAACGCCCCTAG 59.477 63.158 0.00 0.00 34.95 3.02
8050 10839 1.265454 CCTCAAGGAACGCCCCTAGT 61.265 60.000 0.00 0.00 34.95 2.57
8051 10840 0.108138 CTCAAGGAACGCCCCTAGTG 60.108 60.000 0.00 0.00 34.95 2.74
8052 10841 0.543410 TCAAGGAACGCCCCTAGTGA 60.543 55.000 0.00 0.00 34.95 3.41
8053 10842 0.108138 CAAGGAACGCCCCTAGTGAG 60.108 60.000 0.00 0.00 34.95 3.51
8054 10843 1.900545 AAGGAACGCCCCTAGTGAGC 61.901 60.000 0.00 0.00 34.95 4.26
8055 10844 2.187163 GAACGCCCCTAGTGAGCC 59.813 66.667 0.00 0.00 0.00 4.70
8056 10845 2.606519 AACGCCCCTAGTGAGCCA 60.607 61.111 0.00 0.00 0.00 4.75
8057 10846 2.579684 GAACGCCCCTAGTGAGCCAG 62.580 65.000 0.00 0.00 0.00 4.85
8058 10847 4.537433 CGCCCCTAGTGAGCCAGC 62.537 72.222 0.00 0.00 0.00 4.85
8059 10848 4.182433 GCCCCTAGTGAGCCAGCC 62.182 72.222 0.00 0.00 0.00 4.85
8060 10849 3.483869 CCCCTAGTGAGCCAGCCC 61.484 72.222 0.00 0.00 0.00 5.19
8061 10850 2.688666 CCCTAGTGAGCCAGCCCA 60.689 66.667 0.00 0.00 0.00 5.36
8062 10851 2.300967 CCCTAGTGAGCCAGCCCAA 61.301 63.158 0.00 0.00 0.00 4.12
8063 10852 1.639635 CCCTAGTGAGCCAGCCCAAT 61.640 60.000 0.00 0.00 0.00 3.16
8064 10853 1.131638 CCTAGTGAGCCAGCCCAATA 58.868 55.000 0.00 0.00 0.00 1.90
8065 10854 1.071385 CCTAGTGAGCCAGCCCAATAG 59.929 57.143 2.11 2.11 32.60 1.73
8066 10855 0.469917 TAGTGAGCCAGCCCAATAGC 59.530 55.000 0.00 0.00 0.00 2.97
8067 10856 1.077501 GTGAGCCAGCCCAATAGCA 60.078 57.895 0.00 0.00 34.23 3.49
8068 10857 1.099879 GTGAGCCAGCCCAATAGCAG 61.100 60.000 0.00 0.00 34.23 4.24
8069 10858 1.527844 GAGCCAGCCCAATAGCAGG 60.528 63.158 0.00 0.00 42.08 4.85
8070 10859 2.276309 GAGCCAGCCCAATAGCAGGT 62.276 60.000 0.00 0.00 41.28 4.00
8071 10860 1.380380 GCCAGCCCAATAGCAGGTT 60.380 57.895 0.00 0.00 41.28 3.50
8072 10861 0.972471 GCCAGCCCAATAGCAGGTTT 60.972 55.000 0.00 0.00 41.28 3.27
8073 10862 1.560505 CCAGCCCAATAGCAGGTTTT 58.439 50.000 0.00 0.00 34.85 2.43
8074 10863 1.205417 CCAGCCCAATAGCAGGTTTTG 59.795 52.381 0.00 0.00 34.85 2.44
8088 10877 5.389859 CAGGTTTTGCATTTATCCACTCA 57.610 39.130 0.00 0.00 0.00 3.41
8089 10878 5.404946 CAGGTTTTGCATTTATCCACTCAG 58.595 41.667 0.00 0.00 0.00 3.35
8090 10879 5.047802 CAGGTTTTGCATTTATCCACTCAGT 60.048 40.000 0.00 0.00 0.00 3.41
8091 10880 5.539955 AGGTTTTGCATTTATCCACTCAGTT 59.460 36.000 0.00 0.00 0.00 3.16
8092 10881 6.041979 AGGTTTTGCATTTATCCACTCAGTTT 59.958 34.615 0.00 0.00 0.00 2.66
8093 10882 6.705825 GGTTTTGCATTTATCCACTCAGTTTT 59.294 34.615 0.00 0.00 0.00 2.43
8094 10883 7.095649 GGTTTTGCATTTATCCACTCAGTTTTC 60.096 37.037 0.00 0.00 0.00 2.29
8095 10884 6.899393 TTGCATTTATCCACTCAGTTTTCT 57.101 33.333 0.00 0.00 0.00 2.52
8096 10885 6.899393 TGCATTTATCCACTCAGTTTTCTT 57.101 33.333 0.00 0.00 0.00 2.52
8097 10886 6.913170 TGCATTTATCCACTCAGTTTTCTTC 58.087 36.000 0.00 0.00 0.00 2.87
8098 10887 6.716628 TGCATTTATCCACTCAGTTTTCTTCT 59.283 34.615 0.00 0.00 0.00 2.85
8099 10888 7.231317 TGCATTTATCCACTCAGTTTTCTTCTT 59.769 33.333 0.00 0.00 0.00 2.52
8100 10889 7.752686 GCATTTATCCACTCAGTTTTCTTCTTC 59.247 37.037 0.00 0.00 0.00 2.87
8101 10890 9.007901 CATTTATCCACTCAGTTTTCTTCTTCT 57.992 33.333 0.00 0.00 0.00 2.85
8102 10891 8.980481 TTTATCCACTCAGTTTTCTTCTTCTT 57.020 30.769 0.00 0.00 0.00 2.52
8103 10892 8.608844 TTATCCACTCAGTTTTCTTCTTCTTC 57.391 34.615 0.00 0.00 0.00 2.87
8104 10893 6.240549 TCCACTCAGTTTTCTTCTTCTTCT 57.759 37.500 0.00 0.00 0.00 2.85
8105 10894 6.653989 TCCACTCAGTTTTCTTCTTCTTCTT 58.346 36.000 0.00 0.00 0.00 2.52
8106 10895 6.763610 TCCACTCAGTTTTCTTCTTCTTCTTC 59.236 38.462 0.00 0.00 0.00 2.87
8107 10896 6.765512 CCACTCAGTTTTCTTCTTCTTCTTCT 59.234 38.462 0.00 0.00 0.00 2.85
8108 10897 7.928706 CCACTCAGTTTTCTTCTTCTTCTTCTA 59.071 37.037 0.00 0.00 0.00 2.10
8109 10898 8.760569 CACTCAGTTTTCTTCTTCTTCTTCTAC 58.239 37.037 0.00 0.00 0.00 2.59
8110 10899 8.700973 ACTCAGTTTTCTTCTTCTTCTTCTACT 58.299 33.333 0.00 0.00 0.00 2.57
8111 10900 9.541143 CTCAGTTTTCTTCTTCTTCTTCTACTT 57.459 33.333 0.00 0.00 0.00 2.24
8112 10901 9.892130 TCAGTTTTCTTCTTCTTCTTCTACTTT 57.108 29.630 0.00 0.00 0.00 2.66
8222 11011 9.762933 AATGTTCATGTAGTTTAAAAGCAATGT 57.237 25.926 0.00 0.00 0.00 2.71
8223 11012 9.762933 ATGTTCATGTAGTTTAAAAGCAATGTT 57.237 25.926 0.00 0.00 0.00 2.71
8224 11013 9.243637 TGTTCATGTAGTTTAAAAGCAATGTTC 57.756 29.630 0.00 0.00 0.00 3.18
8225 11014 9.243637 GTTCATGTAGTTTAAAAGCAATGTTCA 57.756 29.630 0.00 0.00 0.00 3.18
8226 11015 8.795786 TCATGTAGTTTAAAAGCAATGTTCAC 57.204 30.769 0.00 0.00 0.00 3.18
8227 11016 7.589587 TCATGTAGTTTAAAAGCAATGTTCACG 59.410 33.333 0.00 0.00 0.00 4.35
8228 11017 5.683743 TGTAGTTTAAAAGCAATGTTCACGC 59.316 36.000 0.00 0.00 0.00 5.34
8229 11018 4.677584 AGTTTAAAAGCAATGTTCACGCA 58.322 34.783 0.00 0.00 0.00 5.24
8230 11019 5.105752 AGTTTAAAAGCAATGTTCACGCAA 58.894 33.333 0.00 0.00 0.00 4.85
8231 11020 5.005299 AGTTTAAAAGCAATGTTCACGCAAC 59.995 36.000 0.00 0.00 35.28 4.17
8232 11021 2.869233 AAAGCAATGTTCACGCAACT 57.131 40.000 0.06 0.00 35.79 3.16
8233 11022 2.869233 AAGCAATGTTCACGCAACTT 57.131 40.000 0.06 0.00 35.79 2.66
8234 11023 2.869233 AGCAATGTTCACGCAACTTT 57.131 40.000 0.06 0.00 35.79 2.66
8235 11024 2.731217 AGCAATGTTCACGCAACTTTC 58.269 42.857 0.06 0.00 35.79 2.62
8236 11025 2.098934 AGCAATGTTCACGCAACTTTCA 59.901 40.909 0.06 0.00 35.79 2.69
8237 11026 2.857152 GCAATGTTCACGCAACTTTCAA 59.143 40.909 0.06 0.00 35.79 2.69
8238 11027 3.305629 GCAATGTTCACGCAACTTTCAAA 59.694 39.130 0.06 0.00 35.79 2.69
8239 11028 4.201666 GCAATGTTCACGCAACTTTCAAAA 60.202 37.500 0.06 0.00 35.79 2.44
8240 11029 5.669848 GCAATGTTCACGCAACTTTCAAAAA 60.670 36.000 0.06 0.00 35.79 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 0.179084 CGGCAGGCGGAGAAAGAATA 60.179 55.000 8.89 0.00 0.00 1.75
31 32 1.450312 CGGCAGGCGGAGAAAGAAT 60.450 57.895 8.89 0.00 0.00 2.40
77 78 0.110486 ACACTGTCTCCCGCCAAATT 59.890 50.000 0.00 0.00 0.00 1.82
83 84 1.668151 GACCAACACTGTCTCCCGC 60.668 63.158 0.00 0.00 0.00 6.13
92 93 1.451936 GTCCAGGCTGACCAACACT 59.548 57.895 17.94 0.00 39.06 3.55
94 95 2.425592 CGTCCAGGCTGACCAACA 59.574 61.111 17.94 0.00 39.06 3.33
95 96 2.358737 CCGTCCAGGCTGACCAAC 60.359 66.667 17.94 7.58 39.06 3.77
142 149 1.227704 TCGCCGGCAAACTCTTTGA 60.228 52.632 28.98 9.20 43.26 2.69
144 151 2.617274 GCTCGCCGGCAAACTCTTT 61.617 57.895 28.98 0.00 0.00 2.52
159 183 0.824759 AGACGGGTACAGATTGGCTC 59.175 55.000 0.00 0.00 0.00 4.70
172 196 4.767255 GCCCAGTGAGCAGACGGG 62.767 72.222 0.00 9.30 40.11 5.28
176 200 0.835971 TAGGTTGCCCAGTGAGCAGA 60.836 55.000 0.00 0.00 42.17 4.26
183 208 3.717294 CGGCCTAGGTTGCCCAGT 61.717 66.667 11.31 0.00 46.48 4.00
248 273 1.878953 TCGGCTCCAAAAGTCTTGTC 58.121 50.000 0.00 0.00 0.00 3.18
297 322 0.033503 TCACACCTCCGCTCTCCATA 60.034 55.000 0.00 0.00 0.00 2.74
324 349 2.777692 ACATGTCCAGGAATCGGGTAAT 59.222 45.455 0.00 0.00 0.00 1.89
327 352 0.991920 AACATGTCCAGGAATCGGGT 59.008 50.000 0.00 0.00 0.00 5.28
332 357 8.739972 GTCTGTTATTTAAACATGTCCAGGAAT 58.260 33.333 0.00 0.00 0.00 3.01
340 575 7.389330 TCACATCCGTCTGTTATTTAAACATGT 59.611 33.333 0.00 0.00 0.00 3.21
353 588 0.247736 GGCTTCTCACATCCGTCTGT 59.752 55.000 0.00 0.00 0.00 3.41
355 590 0.976641 TTGGCTTCTCACATCCGTCT 59.023 50.000 0.00 0.00 0.00 4.18
357 592 1.278985 TGATTGGCTTCTCACATCCGT 59.721 47.619 0.00 0.00 0.00 4.69
364 599 3.181440 ACACCTCTTTGATTGGCTTCTCA 60.181 43.478 0.00 0.00 0.00 3.27
369 604 5.567423 GCATTAAACACCTCTTTGATTGGCT 60.567 40.000 0.00 0.00 0.00 4.75
378 613 2.433436 GACCGGCATTAAACACCTCTT 58.567 47.619 0.00 0.00 0.00 2.85
403 638 2.436646 GCCACACGTCCATCCCAG 60.437 66.667 0.00 0.00 0.00 4.45
404 639 4.386951 CGCCACACGTCCATCCCA 62.387 66.667 0.00 0.00 36.87 4.37
409 644 4.662961 CTGAGCGCCACACGTCCA 62.663 66.667 2.29 0.00 46.11 4.02
454 693 2.871096 ACCTCCATTAAAACCAGCGA 57.129 45.000 0.00 0.00 0.00 4.93
464 703 3.501062 CGACTACTCGCATACCTCCATTA 59.499 47.826 0.00 0.00 31.91 1.90
479 718 1.211190 GAAACCGCGTCCGACTACT 59.789 57.895 4.92 0.00 36.29 2.57
481 720 0.244450 ATTGAAACCGCGTCCGACTA 59.756 50.000 4.92 0.00 36.29 2.59
484 723 1.738830 GGATTGAAACCGCGTCCGA 60.739 57.895 4.92 0.00 36.29 4.55
492 731 2.025589 GGTCTCTCCGGATTGAAACC 57.974 55.000 3.57 1.83 0.00 3.27
504 743 1.061253 CGCGTTCTCTCGGTCTCTC 59.939 63.158 0.00 0.00 0.00 3.20
505 744 1.671704 ACGCGTTCTCTCGGTCTCT 60.672 57.895 5.58 0.00 0.00 3.10
506 745 1.512310 CACGCGTTCTCTCGGTCTC 60.512 63.158 10.22 0.00 0.00 3.36
507 746 2.561885 CACGCGTTCTCTCGGTCT 59.438 61.111 10.22 0.00 0.00 3.85
508 747 3.173240 GCACGCGTTCTCTCGGTC 61.173 66.667 10.22 0.00 0.00 4.79
509 748 3.973516 TGCACGCGTTCTCTCGGT 61.974 61.111 10.22 0.00 0.00 4.69
510 749 3.470567 GTGCACGCGTTCTCTCGG 61.471 66.667 10.22 0.00 0.00 4.63
511 750 2.710971 CTGTGCACGCGTTCTCTCG 61.711 63.158 10.22 0.00 0.00 4.04
652 892 0.253327 GCCAAAATCCTCTCCCTCGT 59.747 55.000 0.00 0.00 0.00 4.18
671 914 2.672996 CCGACAAACCTGGCCCAG 60.673 66.667 2.91 2.91 0.00 4.45
723 966 2.299727 TTTTCCAGCAAACCGGGGGA 62.300 55.000 6.32 0.00 0.00 4.81
766 1023 4.222810 CCATCCAACATGGTCCTATATCGA 59.777 45.833 0.00 0.00 39.03 3.59
814 1071 3.697747 CCCCCTGTTACCGTGCGA 61.698 66.667 0.00 0.00 0.00 5.10
816 1073 1.228337 AAACCCCCTGTTACCGTGC 60.228 57.895 0.00 0.00 35.67 5.34
817 1074 0.108963 TCAAACCCCCTGTTACCGTG 59.891 55.000 0.00 0.00 35.67 4.94
823 1080 2.046292 CAAATGGTCAAACCCCCTGTT 58.954 47.619 0.00 0.00 37.50 3.16
824 1081 1.219213 TCAAATGGTCAAACCCCCTGT 59.781 47.619 0.00 0.00 37.50 4.00
826 1083 1.203174 CCTCAAATGGTCAAACCCCCT 60.203 52.381 0.00 0.00 37.50 4.79
829 1086 2.009681 ACCCTCAAATGGTCAAACCC 57.990 50.000 0.00 0.00 37.50 4.11
837 1094 0.457035 CAATGCGGACCCTCAAATGG 59.543 55.000 0.00 0.00 0.00 3.16
838 1095 0.457035 CCAATGCGGACCCTCAAATG 59.543 55.000 0.00 0.00 36.56 2.32
839 1096 0.331278 TCCAATGCGGACCCTCAAAT 59.669 50.000 0.00 0.00 39.64 2.32
841 1098 1.198094 TCTCCAATGCGGACCCTCAA 61.198 55.000 0.00 0.00 39.64 3.02
842 1099 0.982852 ATCTCCAATGCGGACCCTCA 60.983 55.000 0.00 0.00 39.64 3.86
844 1101 1.528824 CATCTCCAATGCGGACCCT 59.471 57.895 0.00 0.00 39.64 4.34
846 1103 2.189499 GGCATCTCCAATGCGGACC 61.189 63.158 4.11 0.00 45.41 4.46
847 1104 2.189499 GGGCATCTCCAATGCGGAC 61.189 63.158 4.11 0.00 45.41 4.79
848 1105 1.053835 TAGGGCATCTCCAATGCGGA 61.054 55.000 4.11 0.00 45.41 5.54
849 1106 0.179020 TTAGGGCATCTCCAATGCGG 60.179 55.000 4.11 0.00 45.41 5.69
850 1107 1.679139 TTTAGGGCATCTCCAATGCG 58.321 50.000 4.11 0.00 45.41 4.73
852 1109 5.603170 ACAAATTTAGGGCATCTCCAATG 57.397 39.130 0.00 0.00 36.21 2.82
854 1111 6.951198 TCTTAACAAATTTAGGGCATCTCCAA 59.049 34.615 0.00 0.00 36.21 3.53
855 1112 6.489603 TCTTAACAAATTTAGGGCATCTCCA 58.510 36.000 0.00 0.00 36.21 3.86
856 1113 7.588497 ATCTTAACAAATTTAGGGCATCTCC 57.412 36.000 0.00 0.00 0.00 3.71
858 1115 9.875691 GAAAATCTTAACAAATTTAGGGCATCT 57.124 29.630 0.00 0.00 0.00 2.90
859 1116 9.875691 AGAAAATCTTAACAAATTTAGGGCATC 57.124 29.630 0.00 0.00 0.00 3.91
873 2630 9.803315 AAACTCACCTCAAAAGAAAATCTTAAC 57.197 29.630 0.00 0.00 35.27 2.01
928 2693 2.107953 GGGACTGAGAGCATCGGC 59.892 66.667 0.00 0.00 42.67 5.54
929 2694 1.406065 ATGGGGACTGAGAGCATCGG 61.406 60.000 0.00 0.00 42.67 4.18
930 2695 0.033228 GATGGGGACTGAGAGCATCG 59.967 60.000 0.00 0.00 42.67 3.84
974 2739 1.379044 AAGAATTCCCTGCTGCGGG 60.379 57.895 20.81 20.81 46.13 6.13
975 2740 2.101700 GAAGAATTCCCTGCTGCGG 58.898 57.895 0.65 0.26 39.83 5.69
1076 2841 3.385749 GAGGATTTCAGGCGGGCGA 62.386 63.158 0.00 0.00 0.00 5.54
1110 2875 3.838271 GTGCAGGATCGGCGGAGA 61.838 66.667 7.21 0.00 0.00 3.71
1155 2920 1.916273 TAGGGCGAAGAAGGTGGCA 60.916 57.895 0.00 0.00 0.00 4.92
1207 2972 4.960866 GAAACCAACGGGGGCGGT 62.961 66.667 0.26 0.00 42.91 5.68
1213 2978 2.642700 CCAAGCGAAACCAACGGG 59.357 61.111 0.00 0.00 41.29 5.28
1223 2988 1.684734 GTACCCTCCTCCCAAGCGA 60.685 63.158 0.00 0.00 0.00 4.93
1225 2990 2.732619 CGGTACCCTCCTCCCAAGC 61.733 68.421 6.25 0.00 0.00 4.01
1288 3053 1.211949 CCCTGACATACCCAATCGGTT 59.788 52.381 0.00 0.00 45.36 4.44
1307 3072 6.128363 ACAAAAAGAACTCGATCGGTTAATCC 60.128 38.462 16.41 6.54 0.00 3.01
1308 3073 6.828672 ACAAAAAGAACTCGATCGGTTAATC 58.171 36.000 16.41 6.98 0.00 1.75
1366 3134 4.219033 CCACGATTTCACAGCAACTTTAC 58.781 43.478 0.00 0.00 0.00 2.01
1373 3141 1.336440 CCAAACCACGATTTCACAGCA 59.664 47.619 0.00 0.00 0.00 4.41
1420 3191 4.283467 ACAGGCAGAAGAGTACATGTGTAA 59.717 41.667 9.11 0.00 31.52 2.41
1426 3197 1.065854 GGCACAGGCAGAAGAGTACAT 60.066 52.381 0.00 0.00 43.71 2.29
1427 3198 0.321671 GGCACAGGCAGAAGAGTACA 59.678 55.000 0.00 0.00 43.71 2.90
1428 3199 0.391793 GGGCACAGGCAGAAGAGTAC 60.392 60.000 0.00 0.00 43.71 2.73
1429 3200 0.545309 AGGGCACAGGCAGAAGAGTA 60.545 55.000 0.00 0.00 43.71 2.59
1525 3304 4.202141 CCTTTGTCATCTGGTGCTTTTGAA 60.202 41.667 0.00 0.00 0.00 2.69
1761 3540 6.778834 ATTGATGGTGCAATCTATTTGTCA 57.221 33.333 0.00 0.00 37.65 3.58
1766 3545 9.590451 CAAAGTTAATTGATGGTGCAATCTATT 57.410 29.630 11.20 11.20 37.50 1.73
1771 3550 9.553064 TTAAACAAAGTTAATTGATGGTGCAAT 57.447 25.926 0.00 0.00 40.04 3.56
1796 3575 9.683069 CAAATGCTTTTATGTGTCTTAACTCTT 57.317 29.630 0.00 0.00 0.00 2.85
1797 3576 8.299570 CCAAATGCTTTTATGTGTCTTAACTCT 58.700 33.333 0.00 0.00 0.00 3.24
1798 3577 8.296713 TCCAAATGCTTTTATGTGTCTTAACTC 58.703 33.333 0.00 0.00 0.00 3.01
1799 3578 8.177119 TCCAAATGCTTTTATGTGTCTTAACT 57.823 30.769 0.00 0.00 0.00 2.24
1800 3579 8.863049 CATCCAAATGCTTTTATGTGTCTTAAC 58.137 33.333 0.00 0.00 0.00 2.01
1838 3617 6.216801 ACTTTGCTGTTACCTGATACGATA 57.783 37.500 0.00 0.00 0.00 2.92
1927 4083 4.918583 GTGAGTAGAACAGTGTACTGAAGC 59.081 45.833 18.18 7.11 46.59 3.86
2110 4267 6.662414 TTTATTTATGACAAGTCTCGCCAG 57.338 37.500 1.53 0.00 0.00 4.85
2165 4322 3.119388 TCCATGCTAGTTGAATTTGCAGC 60.119 43.478 3.26 0.00 37.07 5.25
2263 4420 9.855021 CCAAAATAGTTCGAAAGTGGATATTTT 57.145 29.630 0.00 7.75 33.76 1.82
2461 4625 6.003950 TCCTAAATTAAGCATCATAGGTGCC 58.996 40.000 0.00 0.00 43.50 5.01
2513 4677 5.983720 CCCTACCAAGATAGACGTGTTAATG 59.016 44.000 0.00 0.00 0.00 1.90
2536 4700 4.305989 TCAGATGACTTGTTGTTTTGCC 57.694 40.909 0.00 0.00 0.00 4.52
2845 5140 6.092955 ACAAAAGTCAATGCATGATTCTGT 57.907 33.333 0.00 2.56 40.97 3.41
2869 5164 7.921041 AATGATTCCTACAAGATAGAGTGGA 57.079 36.000 0.00 0.00 0.00 4.02
2921 5216 3.328050 AGGAAGGAACCTCATTTTCGACT 59.672 43.478 0.00 0.00 34.98 4.18
2953 5248 0.628522 TGAGAGAGAGACAGGGAGGG 59.371 60.000 0.00 0.00 0.00 4.30
3009 5304 4.739793 TGACCCAAACAAATCCTTCTGAT 58.260 39.130 0.00 0.00 34.22 2.90
3049 5344 9.787435 TTAACAGTTGAGATACACCATTTAACT 57.213 29.630 0.00 0.00 0.00 2.24
3058 5353 7.803189 CACAATTGGTTAACAGTTGAGATACAC 59.197 37.037 12.35 0.00 46.34 2.90
3078 5700 7.759489 AATATGTCAACACTACCACACAATT 57.241 32.000 0.00 0.00 0.00 2.32
3390 6012 7.011499 TGGTAACTGTATCAATTACACAGGT 57.989 36.000 14.34 11.50 43.18 4.00
3476 6098 0.830444 TCCCACTGCTTGTCTACGGT 60.830 55.000 0.00 0.00 0.00 4.83
3483 6105 2.320681 TACTAGGTCCCACTGCTTGT 57.679 50.000 0.00 0.00 0.00 3.16
3526 6162 2.602676 CCAAGGCCGAGAAAGGGGA 61.603 63.158 0.00 0.00 0.00 4.81
3682 6318 6.748132 TGAAATCATGAAAACCAAAGAGACC 58.252 36.000 0.00 0.00 0.00 3.85
3729 6365 9.209048 TGGATATAGAAGAGCCTAAAACTACAA 57.791 33.333 0.00 0.00 0.00 2.41
3891 6527 3.477210 AGAGCTTCAACCGTTTTCTCT 57.523 42.857 0.00 0.00 0.00 3.10
4004 6640 8.420374 ACCGTATACACAAAATGAAGAGTATG 57.580 34.615 3.32 0.00 0.00 2.39
4329 6965 6.659242 TCCCTGAGTAATTTCTTCAAATCACC 59.341 38.462 0.00 0.00 30.37 4.02
4330 6966 7.687941 TCCCTGAGTAATTTCTTCAAATCAC 57.312 36.000 0.00 0.00 30.37 3.06
4619 7257 3.458487 ACCCCTTACTGTCCCATGATAAC 59.542 47.826 0.00 0.00 0.00 1.89
4658 7296 8.463607 CAACACAGGAGAACCTAAAACTAAAAA 58.536 33.333 0.00 0.00 45.94 1.94
5132 7774 6.532657 AGCACATTCAACAAAAAGAACTCTTG 59.467 34.615 0.00 0.00 36.12 3.02
5294 7936 1.748493 GTTGGTGGTTTCTGTTCTGCA 59.252 47.619 0.00 0.00 0.00 4.41
5445 8087 2.171635 GATGTTGGCTGGAACGTCC 58.828 57.895 0.00 0.00 36.31 4.79
5483 8125 0.533491 CTCGGTCGTTGGGGTCATTA 59.467 55.000 0.00 0.00 0.00 1.90
5512 8154 3.880490 TGTTTCTTTGATGCGGTAACACT 59.120 39.130 0.00 0.00 0.00 3.55
5568 8210 2.042464 GTCAGGTGGCTGATCATCCTA 58.958 52.381 16.28 0.91 35.65 2.94
5615 8257 0.825010 CAAAGGGTGGCTGCTCACTT 60.825 55.000 16.88 12.17 37.75 3.16
5707 8349 3.368323 CCAAACATCCAAAGGGTGTATGC 60.368 47.826 1.81 0.00 34.93 3.14
5770 8412 4.993584 CGATATCCAGCAAATCTAACAGCT 59.006 41.667 0.00 0.00 37.95 4.24
5798 8440 2.094675 GTTGCACCATGCTTATCCACT 58.905 47.619 2.02 0.00 45.31 4.00
5879 8521 4.136796 CAGATCAAAACTCAACACTGGGA 58.863 43.478 0.00 0.00 0.00 4.37
6004 8646 6.428771 GCAAACAGGTACAGGTAGAAACATAA 59.571 38.462 0.00 0.00 0.00 1.90
6118 8760 8.522178 AATACTAAGAGCGTGCAATAATCTAC 57.478 34.615 0.00 0.00 0.00 2.59
6349 8992 2.813754 TGTCTGCTTTGCATAAGACCAC 59.186 45.455 11.34 5.59 38.13 4.16
6424 9067 9.722056 CCTGCATACATATTCAAGAAAAGTAAC 57.278 33.333 0.00 0.00 0.00 2.50
6562 9205 8.824756 AGTTACTCTGGACATTCTTATCTACA 57.175 34.615 0.00 0.00 0.00 2.74
6583 9226 8.255905 GGAGGAACTAGTTAACATAGCAAGTTA 58.744 37.037 8.42 0.00 41.55 2.24
6898 9543 3.385111 ACATCAAATCTACTCCCTCCGTC 59.615 47.826 0.00 0.00 0.00 4.79
6975 9626 5.226194 TCAAAAGGCTGCATAACCATTTT 57.774 34.783 0.50 4.84 0.00 1.82
7091 9742 0.884704 CCGCAATTCTACCCCCGATG 60.885 60.000 0.00 0.00 0.00 3.84
7098 9749 0.179054 GGAGGACCCGCAATTCTACC 60.179 60.000 0.00 0.00 0.00 3.18
7109 9760 0.991920 TTTCTGATGGTGGAGGACCC 59.008 55.000 0.00 0.00 45.45 4.46
7124 9775 0.962356 CAGAGGGCGCCACATTTTCT 60.962 55.000 30.85 14.42 0.00 2.52
7125 9776 1.508088 CAGAGGGCGCCACATTTTC 59.492 57.895 30.85 14.67 0.00 2.29
7346 9997 1.817209 CCGGGTGGCTTCTCTACTC 59.183 63.158 0.00 0.00 0.00 2.59
7390 10166 7.221259 CGTAAACGTGTCATACAATATCAAGGA 59.779 37.037 0.00 0.00 34.11 3.36
7446 10222 4.060900 GAGTCAGATCAGAAACACAGCAA 58.939 43.478 0.00 0.00 0.00 3.91
7458 10234 1.550327 ACAGGAAGCGAGTCAGATCA 58.450 50.000 0.00 0.00 0.00 2.92
7515 10295 3.690422 CATGTTATTGCATTAACGCCGT 58.310 40.909 20.67 8.82 35.30 5.68
7517 10297 2.467305 CGCATGTTATTGCATTAACGCC 59.533 45.455 20.67 12.95 42.91 5.68
7521 10301 6.616017 TGAAAGTCGCATGTTATTGCATTAA 58.384 32.000 0.00 0.00 42.91 1.40
7573 10353 9.010029 GGAAGTAGGAGAGATAATTACAGAGAG 57.990 40.741 0.00 0.00 0.00 3.20
7577 10357 9.575868 TGTAGGAAGTAGGAGAGATAATTACAG 57.424 37.037 0.00 0.00 0.00 2.74
7611 10392 0.323542 AGAGGAGGGATGAACGACGT 60.324 55.000 0.00 0.00 0.00 4.34
7612 10393 1.676746 TAGAGGAGGGATGAACGACG 58.323 55.000 0.00 0.00 0.00 5.12
7617 10398 4.015541 AGGTAAGGTTAGAGGAGGGATGAA 60.016 45.833 0.00 0.00 0.00 2.57
7618 10399 3.536434 AGGTAAGGTTAGAGGAGGGATGA 59.464 47.826 0.00 0.00 0.00 2.92
7647 10428 1.705186 CAAAACCAAGAGGGGAGGAGA 59.295 52.381 0.00 0.00 42.91 3.71
7648 10429 1.705186 TCAAAACCAAGAGGGGAGGAG 59.295 52.381 0.00 0.00 42.91 3.69
7649 10430 1.827792 TCAAAACCAAGAGGGGAGGA 58.172 50.000 0.00 0.00 42.91 3.71
7652 10433 4.469469 AAAGATCAAAACCAAGAGGGGA 57.531 40.909 0.00 0.00 42.91 4.81
7660 10446 7.006509 AGATGAGAGGAAAAAGATCAAAACCA 58.993 34.615 0.00 0.00 0.00 3.67
7661 10447 7.392953 AGAGATGAGAGGAAAAAGATCAAAACC 59.607 37.037 0.00 0.00 0.00 3.27
7677 10463 5.638783 GGTGCAAAAATTCAGAGATGAGAG 58.361 41.667 0.00 0.00 0.00 3.20
7703 10490 4.116238 GTTGATGCGGTTTTCAAGGAAAA 58.884 39.130 0.28 0.28 38.90 2.29
7717 10504 3.443045 GGTGGGCCAGTTGATGCG 61.443 66.667 6.40 0.00 34.09 4.73
7777 10566 7.791029 ACCCTTATTTGGTAAGCATTTATTGG 58.209 34.615 0.00 0.00 38.78 3.16
7802 10591 5.488919 TGCCATGGGGATTTTATTTGGTAAA 59.511 36.000 15.13 0.00 35.59 2.01
7803 10592 5.032846 TGCCATGGGGATTTTATTTGGTAA 58.967 37.500 15.13 0.00 35.59 2.85
7805 10594 3.458831 TGCCATGGGGATTTTATTTGGT 58.541 40.909 15.13 0.00 35.59 3.67
7820 10609 0.250793 ATTGCCCATGTGTTGCCATG 59.749 50.000 0.00 0.00 41.52 3.66
7821 10610 0.985760 AATTGCCCATGTGTTGCCAT 59.014 45.000 0.00 0.00 0.00 4.40
7822 10611 1.637338 TAATTGCCCATGTGTTGCCA 58.363 45.000 0.00 0.00 0.00 4.92
7823 10612 2.985957 ATAATTGCCCATGTGTTGCC 57.014 45.000 0.00 0.00 0.00 4.52
7824 10613 4.127566 AGAATAATTGCCCATGTGTTGC 57.872 40.909 0.00 0.00 0.00 4.17
7825 10614 6.455360 ACTAGAATAATTGCCCATGTGTTG 57.545 37.500 0.00 0.00 0.00 3.33
7826 10615 7.573710 TCTACTAGAATAATTGCCCATGTGTT 58.426 34.615 0.00 0.00 0.00 3.32
7827 10616 7.136822 TCTACTAGAATAATTGCCCATGTGT 57.863 36.000 0.00 0.00 0.00 3.72
7828 10617 7.220030 ACTCTACTAGAATAATTGCCCATGTG 58.780 38.462 0.00 0.00 0.00 3.21
7829 10618 7.380423 ACTCTACTAGAATAATTGCCCATGT 57.620 36.000 0.00 0.00 0.00 3.21
7830 10619 8.682936 AAACTCTACTAGAATAATTGCCCATG 57.317 34.615 0.00 0.00 0.00 3.66
7846 10635 8.101419 CCCTTTACCTCATGTTTAAACTCTACT 58.899 37.037 18.72 1.06 0.00 2.57
7847 10636 7.881751 ACCCTTTACCTCATGTTTAAACTCTAC 59.118 37.037 18.72 0.00 0.00 2.59
7848 10637 7.981142 ACCCTTTACCTCATGTTTAAACTCTA 58.019 34.615 18.72 0.00 0.00 2.43
7849 10638 6.849151 ACCCTTTACCTCATGTTTAAACTCT 58.151 36.000 18.72 4.26 0.00 3.24
7850 10639 6.128363 CGACCCTTTACCTCATGTTTAAACTC 60.128 42.308 18.72 2.76 0.00 3.01
7851 10640 5.704053 CGACCCTTTACCTCATGTTTAAACT 59.296 40.000 18.72 2.56 0.00 2.66
7852 10641 5.702209 TCGACCCTTTACCTCATGTTTAAAC 59.298 40.000 11.54 11.54 0.00 2.01
7853 10642 5.867330 TCGACCCTTTACCTCATGTTTAAA 58.133 37.500 0.00 0.00 0.00 1.52
7854 10643 5.486735 TCGACCCTTTACCTCATGTTTAA 57.513 39.130 0.00 0.00 0.00 1.52
7855 10644 5.486735 TTCGACCCTTTACCTCATGTTTA 57.513 39.130 0.00 0.00 0.00 2.01
7856 10645 4.360951 TTCGACCCTTTACCTCATGTTT 57.639 40.909 0.00 0.00 0.00 2.83
7857 10646 4.360951 TTTCGACCCTTTACCTCATGTT 57.639 40.909 0.00 0.00 0.00 2.71
7858 10647 4.360951 TTTTCGACCCTTTACCTCATGT 57.639 40.909 0.00 0.00 0.00 3.21
7859 10648 4.700213 ACATTTTCGACCCTTTACCTCATG 59.300 41.667 0.00 0.00 0.00 3.07
7860 10649 4.918588 ACATTTTCGACCCTTTACCTCAT 58.081 39.130 0.00 0.00 0.00 2.90
7861 10650 4.360951 ACATTTTCGACCCTTTACCTCA 57.639 40.909 0.00 0.00 0.00 3.86
7862 10651 4.633126 GGTACATTTTCGACCCTTTACCTC 59.367 45.833 0.00 0.00 0.00 3.85
7863 10652 4.582869 GGTACATTTTCGACCCTTTACCT 58.417 43.478 0.00 0.00 0.00 3.08
7864 10653 4.952262 GGTACATTTTCGACCCTTTACC 57.048 45.455 0.00 0.00 0.00 2.85
7871 10660 2.203470 TTGGGGGTACATTTTCGACC 57.797 50.000 0.00 0.00 0.00 4.79
7872 10661 2.353579 CGATTGGGGGTACATTTTCGAC 59.646 50.000 0.00 0.00 0.00 4.20
7873 10662 2.236644 TCGATTGGGGGTACATTTTCGA 59.763 45.455 0.00 0.00 0.00 3.71
7874 10663 2.634600 TCGATTGGGGGTACATTTTCG 58.365 47.619 0.00 0.00 0.00 3.46
7875 10664 3.243401 GCATCGATTGGGGGTACATTTTC 60.243 47.826 0.00 0.00 0.00 2.29
7876 10665 2.693074 GCATCGATTGGGGGTACATTTT 59.307 45.455 0.00 0.00 0.00 1.82
7877 10666 2.306847 GCATCGATTGGGGGTACATTT 58.693 47.619 0.00 0.00 0.00 2.32
7878 10667 1.214175 TGCATCGATTGGGGGTACATT 59.786 47.619 0.00 0.00 0.00 2.71
7879 10668 0.843309 TGCATCGATTGGGGGTACAT 59.157 50.000 0.00 0.00 0.00 2.29
7880 10669 0.621082 TTGCATCGATTGGGGGTACA 59.379 50.000 0.00 0.00 0.00 2.90
7881 10670 1.757682 TTTGCATCGATTGGGGGTAC 58.242 50.000 0.00 0.00 0.00 3.34
7882 10671 2.096248 GTTTTGCATCGATTGGGGGTA 58.904 47.619 0.00 0.00 0.00 3.69
7883 10672 0.894835 GTTTTGCATCGATTGGGGGT 59.105 50.000 0.00 0.00 0.00 4.95
7884 10673 0.175531 GGTTTTGCATCGATTGGGGG 59.824 55.000 0.00 0.00 0.00 5.40
7885 10674 0.175531 GGGTTTTGCATCGATTGGGG 59.824 55.000 0.00 0.00 0.00 4.96
7886 10675 1.135024 CAGGGTTTTGCATCGATTGGG 60.135 52.381 0.00 0.00 0.00 4.12
7887 10676 1.135024 CCAGGGTTTTGCATCGATTGG 60.135 52.381 0.00 0.00 0.00 3.16
7888 10677 1.545582 ACCAGGGTTTTGCATCGATTG 59.454 47.619 0.00 0.00 0.00 2.67
7889 10678 1.923356 ACCAGGGTTTTGCATCGATT 58.077 45.000 0.00 0.00 0.00 3.34
7890 10679 1.923356 AACCAGGGTTTTGCATCGAT 58.077 45.000 0.00 0.00 34.22 3.59
7891 10680 2.156098 GTAACCAGGGTTTTGCATCGA 58.844 47.619 9.30 0.00 39.31 3.59
7892 10681 1.883275 TGTAACCAGGGTTTTGCATCG 59.117 47.619 9.30 0.00 39.31 3.84
7893 10682 4.329462 TTTGTAACCAGGGTTTTGCATC 57.671 40.909 9.30 0.00 39.31 3.91
7894 10683 4.762289 TTTTGTAACCAGGGTTTTGCAT 57.238 36.364 9.30 0.00 39.31 3.96
7895 10684 4.553330 TTTTTGTAACCAGGGTTTTGCA 57.447 36.364 9.30 4.16 39.31 4.08
7896 10685 5.586643 TGAATTTTTGTAACCAGGGTTTTGC 59.413 36.000 9.30 1.64 39.31 3.68
7897 10686 7.201688 CCTTGAATTTTTGTAACCAGGGTTTTG 60.202 37.037 9.30 0.00 39.31 2.44
7898 10687 6.826231 CCTTGAATTTTTGTAACCAGGGTTTT 59.174 34.615 9.30 0.00 39.31 2.43
7899 10688 6.353323 CCTTGAATTTTTGTAACCAGGGTTT 58.647 36.000 9.30 0.00 39.31 3.27
7900 10689 5.686387 GCCTTGAATTTTTGTAACCAGGGTT 60.686 40.000 8.97 8.97 41.65 4.11
7901 10690 4.202315 GCCTTGAATTTTTGTAACCAGGGT 60.202 41.667 0.00 0.00 0.00 4.34
7902 10691 4.202305 TGCCTTGAATTTTTGTAACCAGGG 60.202 41.667 0.00 0.00 0.00 4.45
7903 10692 4.749598 GTGCCTTGAATTTTTGTAACCAGG 59.250 41.667 0.00 0.00 0.00 4.45
7904 10693 5.600696 AGTGCCTTGAATTTTTGTAACCAG 58.399 37.500 0.00 0.00 0.00 4.00
7905 10694 5.606348 AGTGCCTTGAATTTTTGTAACCA 57.394 34.783 0.00 0.00 0.00 3.67
7906 10695 7.117667 CCATAAGTGCCTTGAATTTTTGTAACC 59.882 37.037 0.00 0.00 0.00 2.85
7907 10696 7.870445 TCCATAAGTGCCTTGAATTTTTGTAAC 59.130 33.333 0.00 0.00 0.00 2.50
7908 10697 7.957002 TCCATAAGTGCCTTGAATTTTTGTAA 58.043 30.769 0.00 0.00 0.00 2.41
7909 10698 7.531857 TCCATAAGTGCCTTGAATTTTTGTA 57.468 32.000 0.00 0.00 0.00 2.41
7910 10699 6.418057 TCCATAAGTGCCTTGAATTTTTGT 57.582 33.333 0.00 0.00 0.00 2.83
7911 10700 7.325694 AGATCCATAAGTGCCTTGAATTTTTG 58.674 34.615 0.00 0.00 0.00 2.44
7912 10701 7.486407 AGATCCATAAGTGCCTTGAATTTTT 57.514 32.000 0.00 0.00 0.00 1.94
7913 10702 7.486407 AAGATCCATAAGTGCCTTGAATTTT 57.514 32.000 0.00 0.00 0.00 1.82
7914 10703 7.486407 AAAGATCCATAAGTGCCTTGAATTT 57.514 32.000 0.00 0.00 0.00 1.82
7915 10704 8.055181 TCTAAAGATCCATAAGTGCCTTGAATT 58.945 33.333 0.00 0.00 0.00 2.17
7916 10705 7.577303 TCTAAAGATCCATAAGTGCCTTGAAT 58.423 34.615 0.00 0.00 0.00 2.57
7917 10706 6.957631 TCTAAAGATCCATAAGTGCCTTGAA 58.042 36.000 0.00 0.00 0.00 2.69
7918 10707 6.156949 ACTCTAAAGATCCATAAGTGCCTTGA 59.843 38.462 0.00 0.00 0.00 3.02
7919 10708 6.352516 ACTCTAAAGATCCATAAGTGCCTTG 58.647 40.000 0.00 0.00 0.00 3.61
7920 10709 6.567602 ACTCTAAAGATCCATAAGTGCCTT 57.432 37.500 0.00 0.00 0.00 4.35
7921 10710 6.156949 TCAACTCTAAAGATCCATAAGTGCCT 59.843 38.462 0.00 0.00 0.00 4.75
7922 10711 6.349300 TCAACTCTAAAGATCCATAAGTGCC 58.651 40.000 0.00 0.00 0.00 5.01
7923 10712 7.044798 ACTCAACTCTAAAGATCCATAAGTGC 58.955 38.462 0.00 0.00 0.00 4.40
7924 10713 9.442047 AAACTCAACTCTAAAGATCCATAAGTG 57.558 33.333 0.00 0.00 0.00 3.16
7927 10716 9.793259 ACAAAACTCAACTCTAAAGATCCATAA 57.207 29.630 0.00 0.00 0.00 1.90
7928 10717 9.793259 AACAAAACTCAACTCTAAAGATCCATA 57.207 29.630 0.00 0.00 0.00 2.74
7929 10718 8.697507 AACAAAACTCAACTCTAAAGATCCAT 57.302 30.769 0.00 0.00 0.00 3.41
7930 10719 7.773224 TGAACAAAACTCAACTCTAAAGATCCA 59.227 33.333 0.00 0.00 0.00 3.41
7931 10720 8.154649 TGAACAAAACTCAACTCTAAAGATCC 57.845 34.615 0.00 0.00 0.00 3.36
7932 10721 9.439537 GTTGAACAAAACTCAACTCTAAAGATC 57.560 33.333 8.15 0.00 46.01 2.75
7943 10732 4.872664 ACAAACGGTTGAACAAAACTCAA 58.127 34.783 22.35 0.00 38.20 3.02
7944 10733 4.216687 AGACAAACGGTTGAACAAAACTCA 59.783 37.500 22.35 0.00 38.20 3.41
7945 10734 4.729595 AGACAAACGGTTGAACAAAACTC 58.270 39.130 22.35 3.97 38.20 3.01
7946 10735 4.776795 AGACAAACGGTTGAACAAAACT 57.223 36.364 22.35 4.43 38.20 2.66
7947 10736 5.633927 ACTAGACAAACGGTTGAACAAAAC 58.366 37.500 22.35 2.21 38.20 2.43
7948 10737 5.411977 TGACTAGACAAACGGTTGAACAAAA 59.588 36.000 22.35 0.00 38.20 2.44
7949 10738 4.936411 TGACTAGACAAACGGTTGAACAAA 59.064 37.500 22.35 5.33 38.20 2.83
7950 10739 4.505808 TGACTAGACAAACGGTTGAACAA 58.494 39.130 22.35 1.11 38.20 2.83
7951 10740 4.116961 CTGACTAGACAAACGGTTGAACA 58.883 43.478 22.35 8.96 38.20 3.18
7952 10741 3.059800 GCTGACTAGACAAACGGTTGAAC 60.060 47.826 22.35 13.23 38.20 3.18
7953 10742 3.128349 GCTGACTAGACAAACGGTTGAA 58.872 45.455 22.35 3.79 38.20 2.69
7954 10743 2.364324 AGCTGACTAGACAAACGGTTGA 59.636 45.455 22.35 0.00 38.20 3.18
7955 10744 2.755650 AGCTGACTAGACAAACGGTTG 58.244 47.619 12.68 12.68 40.84 3.77
7956 10745 4.595762 TTAGCTGACTAGACAAACGGTT 57.404 40.909 0.00 0.00 0.00 4.44
7957 10746 4.304939 GTTTAGCTGACTAGACAAACGGT 58.695 43.478 0.00 0.00 34.42 4.83
7958 10747 3.678548 GGTTTAGCTGACTAGACAAACGG 59.321 47.826 0.00 0.00 35.64 4.44
7959 10748 3.364023 CGGTTTAGCTGACTAGACAAACG 59.636 47.826 0.00 0.00 35.64 3.60
7960 10749 3.678548 CCGGTTTAGCTGACTAGACAAAC 59.321 47.826 0.00 0.00 35.64 2.93
7961 10750 3.306502 CCCGGTTTAGCTGACTAGACAAA 60.307 47.826 0.00 0.00 35.64 2.83
7962 10751 2.232941 CCCGGTTTAGCTGACTAGACAA 59.767 50.000 0.00 0.00 35.64 3.18
7963 10752 1.822990 CCCGGTTTAGCTGACTAGACA 59.177 52.381 0.00 0.00 35.64 3.41
7964 10753 1.471153 GCCCGGTTTAGCTGACTAGAC 60.471 57.143 0.00 0.00 33.69 2.59
7965 10754 0.822164 GCCCGGTTTAGCTGACTAGA 59.178 55.000 0.00 0.00 0.00 2.43
7966 10755 0.527817 CGCCCGGTTTAGCTGACTAG 60.528 60.000 0.00 0.00 0.00 2.57
7967 10756 0.966875 TCGCCCGGTTTAGCTGACTA 60.967 55.000 0.00 0.00 0.00 2.59
7968 10757 2.227089 CTCGCCCGGTTTAGCTGACT 62.227 60.000 0.00 0.00 0.00 3.41
7969 10758 1.810030 CTCGCCCGGTTTAGCTGAC 60.810 63.158 0.00 0.00 0.00 3.51
7970 10759 2.577059 CTCGCCCGGTTTAGCTGA 59.423 61.111 0.00 0.00 0.00 4.26
7971 10760 2.511600 CCTCGCCCGGTTTAGCTG 60.512 66.667 0.00 0.00 0.00 4.24
7972 10761 1.259840 TAACCTCGCCCGGTTTAGCT 61.260 55.000 9.33 0.00 44.65 3.32
7973 10762 0.179065 ATAACCTCGCCCGGTTTAGC 60.179 55.000 9.33 0.00 44.65 3.09
7974 10763 2.546584 GGTATAACCTCGCCCGGTTTAG 60.547 54.545 9.33 0.00 44.65 1.85
7975 10764 1.412343 GGTATAACCTCGCCCGGTTTA 59.588 52.381 9.33 1.27 44.65 2.01
7976 10765 0.178767 GGTATAACCTCGCCCGGTTT 59.821 55.000 9.33 2.05 44.65 3.27
7978 10767 3.542304 GGTATAACCTCGCCCGGT 58.458 61.111 0.00 0.00 39.48 5.28
7987 10776 0.384669 ACAGCGAGCGAGGTATAACC 59.615 55.000 0.00 0.00 38.99 2.85
7988 10777 1.478137 CACAGCGAGCGAGGTATAAC 58.522 55.000 0.00 0.00 0.00 1.89
7989 10778 0.248907 GCACAGCGAGCGAGGTATAA 60.249 55.000 0.00 0.00 0.00 0.98
7990 10779 1.101635 AGCACAGCGAGCGAGGTATA 61.102 55.000 0.00 0.00 37.01 1.47
7991 10780 2.105128 GCACAGCGAGCGAGGTAT 59.895 61.111 0.00 0.00 0.00 2.73
7992 10781 3.052620 GAGCACAGCGAGCGAGGTA 62.053 63.158 0.00 0.00 37.01 3.08
7993 10782 4.427661 GAGCACAGCGAGCGAGGT 62.428 66.667 0.00 0.00 37.01 3.85
7994 10783 4.426112 TGAGCACAGCGAGCGAGG 62.426 66.667 0.00 0.00 37.01 4.63
7995 10784 3.177920 GTGAGCACAGCGAGCGAG 61.178 66.667 0.00 0.00 37.01 5.03
7996 10785 3.674523 AGTGAGCACAGCGAGCGA 61.675 61.111 3.19 0.00 37.01 4.93
7997 10786 3.476646 CAGTGAGCACAGCGAGCG 61.477 66.667 3.19 0.00 37.01 5.03
7998 10787 1.665916 TTCAGTGAGCACAGCGAGC 60.666 57.895 3.19 0.00 0.00 5.03
7999 10788 0.319383 AGTTCAGTGAGCACAGCGAG 60.319 55.000 9.82 0.00 0.00 5.03
8000 10789 0.958822 TAGTTCAGTGAGCACAGCGA 59.041 50.000 9.82 0.00 0.00 4.93
8001 10790 1.063806 GTAGTTCAGTGAGCACAGCG 58.936 55.000 9.82 0.00 0.00 5.18
8002 10791 1.270305 TGGTAGTTCAGTGAGCACAGC 60.270 52.381 9.82 6.77 0.00 4.40
8003 10792 2.408050 GTGGTAGTTCAGTGAGCACAG 58.592 52.381 9.82 0.00 40.46 3.66
8004 10793 1.070134 GGTGGTAGTTCAGTGAGCACA 59.930 52.381 9.82 2.70 42.08 4.57
8005 10794 1.070134 TGGTGGTAGTTCAGTGAGCAC 59.930 52.381 9.82 6.55 40.11 4.40
8006 10795 1.070134 GTGGTGGTAGTTCAGTGAGCA 59.930 52.381 9.82 0.00 0.00 4.26
8007 10796 1.797025 GTGGTGGTAGTTCAGTGAGC 58.203 55.000 0.00 0.00 0.00 4.26
8008 10797 1.935300 GCGTGGTGGTAGTTCAGTGAG 60.935 57.143 0.00 0.00 0.00 3.51
8009 10798 0.032952 GCGTGGTGGTAGTTCAGTGA 59.967 55.000 0.00 0.00 0.00 3.41
8010 10799 0.949105 GGCGTGGTGGTAGTTCAGTG 60.949 60.000 0.00 0.00 0.00 3.66
8011 10800 1.370064 GGCGTGGTGGTAGTTCAGT 59.630 57.895 0.00 0.00 0.00 3.41
8012 10801 1.736645 CGGCGTGGTGGTAGTTCAG 60.737 63.158 0.00 0.00 0.00 3.02
8013 10802 2.340809 CGGCGTGGTGGTAGTTCA 59.659 61.111 0.00 0.00 0.00 3.18
8014 10803 3.116531 GCGGCGTGGTGGTAGTTC 61.117 66.667 9.37 0.00 0.00 3.01
8015 10804 4.692475 GGCGGCGTGGTGGTAGTT 62.692 66.667 9.37 0.00 0.00 2.24
8017 10806 4.814294 GAGGCGGCGTGGTGGTAG 62.814 72.222 9.37 0.00 0.00 3.18
8023 10812 4.697756 TTCCTTGAGGCGGCGTGG 62.698 66.667 9.37 4.79 34.44 4.94
8024 10813 3.423154 GTTCCTTGAGGCGGCGTG 61.423 66.667 9.37 0.00 34.44 5.34
8030 10819 2.595009 CTAGGGGCGTTCCTTGAGGC 62.595 65.000 4.13 0.00 38.30 4.70
8031 10820 1.265454 ACTAGGGGCGTTCCTTGAGG 61.265 60.000 12.52 0.00 38.30 3.86
8032 10821 0.108138 CACTAGGGGCGTTCCTTGAG 60.108 60.000 12.52 5.06 38.30 3.02
8033 10822 0.543410 TCACTAGGGGCGTTCCTTGA 60.543 55.000 12.52 5.82 38.30 3.02
8034 10823 0.108138 CTCACTAGGGGCGTTCCTTG 60.108 60.000 4.13 5.29 38.30 3.61
8035 10824 1.900545 GCTCACTAGGGGCGTTCCTT 61.901 60.000 4.13 0.00 38.30 3.36
8036 10825 2.359967 GCTCACTAGGGGCGTTCCT 61.360 63.158 0.00 4.25 40.79 3.36
8037 10826 2.187163 GCTCACTAGGGGCGTTCC 59.813 66.667 0.00 0.00 0.00 3.62
8038 10827 2.187163 GGCTCACTAGGGGCGTTC 59.813 66.667 0.00 0.00 0.00 3.95
8039 10828 2.606519 TGGCTCACTAGGGGCGTT 60.607 61.111 0.00 0.00 0.00 4.84
8040 10829 3.077556 CTGGCTCACTAGGGGCGT 61.078 66.667 0.00 0.00 0.00 5.68
8041 10830 4.537433 GCTGGCTCACTAGGGGCG 62.537 72.222 0.00 0.00 0.00 6.13
8042 10831 4.182433 GGCTGGCTCACTAGGGGC 62.182 72.222 0.00 0.00 0.00 5.80
8043 10832 3.483869 GGGCTGGCTCACTAGGGG 61.484 72.222 0.00 0.00 0.00 4.79
8044 10833 1.639635 ATTGGGCTGGCTCACTAGGG 61.640 60.000 0.00 0.00 0.00 3.53
8045 10834 1.071385 CTATTGGGCTGGCTCACTAGG 59.929 57.143 10.69 0.00 29.38 3.02
8046 10835 1.542108 GCTATTGGGCTGGCTCACTAG 60.542 57.143 13.28 13.28 34.16 2.57
8047 10836 0.469917 GCTATTGGGCTGGCTCACTA 59.530 55.000 0.00 0.00 0.00 2.74
8048 10837 1.225704 GCTATTGGGCTGGCTCACT 59.774 57.895 0.00 0.00 0.00 3.41
8049 10838 1.077501 TGCTATTGGGCTGGCTCAC 60.078 57.895 0.00 0.00 0.00 3.51
8050 10839 1.225426 CTGCTATTGGGCTGGCTCA 59.775 57.895 0.00 0.00 0.00 4.26
8051 10840 1.527844 CCTGCTATTGGGCTGGCTC 60.528 63.158 0.00 0.00 42.58 4.70
8052 10841 2.599597 CCTGCTATTGGGCTGGCT 59.400 61.111 0.00 0.00 42.58 4.75
8055 10844 2.660189 CAAAACCTGCTATTGGGCTG 57.340 50.000 0.00 0.00 0.00 4.85
8066 10855 5.047802 ACTGAGTGGATAAATGCAAAACCTG 60.048 40.000 0.00 0.00 0.00 4.00
8067 10856 5.079643 ACTGAGTGGATAAATGCAAAACCT 58.920 37.500 0.00 0.00 0.00 3.50
8068 10857 5.391312 ACTGAGTGGATAAATGCAAAACC 57.609 39.130 0.00 0.00 0.00 3.27
8069 10858 7.653311 AGAAAACTGAGTGGATAAATGCAAAAC 59.347 33.333 0.00 0.00 0.00 2.43
8070 10859 7.725251 AGAAAACTGAGTGGATAAATGCAAAA 58.275 30.769 0.00 0.00 0.00 2.44
8071 10860 7.288810 AGAAAACTGAGTGGATAAATGCAAA 57.711 32.000 0.00 0.00 0.00 3.68
8072 10861 6.899393 AGAAAACTGAGTGGATAAATGCAA 57.101 33.333 0.00 0.00 0.00 4.08
8073 10862 6.716628 AGAAGAAAACTGAGTGGATAAATGCA 59.283 34.615 0.00 0.00 0.00 3.96
8074 10863 7.150783 AGAAGAAAACTGAGTGGATAAATGC 57.849 36.000 0.00 0.00 0.00 3.56
8075 10864 9.007901 AGAAGAAGAAAACTGAGTGGATAAATG 57.992 33.333 0.00 0.00 0.00 2.32
8076 10865 9.579932 AAGAAGAAGAAAACTGAGTGGATAAAT 57.420 29.630 0.00 0.00 0.00 1.40
8077 10866 8.980481 AAGAAGAAGAAAACTGAGTGGATAAA 57.020 30.769 0.00 0.00 0.00 1.40
8078 10867 8.432805 AGAAGAAGAAGAAAACTGAGTGGATAA 58.567 33.333 0.00 0.00 0.00 1.75
8079 10868 7.967908 AGAAGAAGAAGAAAACTGAGTGGATA 58.032 34.615 0.00 0.00 0.00 2.59
8080 10869 6.836242 AGAAGAAGAAGAAAACTGAGTGGAT 58.164 36.000 0.00 0.00 0.00 3.41
8081 10870 6.240549 AGAAGAAGAAGAAAACTGAGTGGA 57.759 37.500 0.00 0.00 0.00 4.02
8082 10871 6.765512 AGAAGAAGAAGAAGAAAACTGAGTGG 59.234 38.462 0.00 0.00 0.00 4.00
8083 10872 7.784633 AGAAGAAGAAGAAGAAAACTGAGTG 57.215 36.000 0.00 0.00 0.00 3.51
8084 10873 8.700973 AGTAGAAGAAGAAGAAGAAAACTGAGT 58.299 33.333 0.00 0.00 0.00 3.41
8085 10874 9.541143 AAGTAGAAGAAGAAGAAGAAAACTGAG 57.459 33.333 0.00 0.00 0.00 3.35
8086 10875 9.892130 AAAGTAGAAGAAGAAGAAGAAAACTGA 57.108 29.630 0.00 0.00 0.00 3.41
8196 10985 9.762933 ACATTGCTTTTAAACTACATGAACATT 57.237 25.926 0.00 0.00 0.00 2.71
8197 10986 9.762933 AACATTGCTTTTAAACTACATGAACAT 57.237 25.926 0.00 0.00 0.00 2.71
8198 10987 9.243637 GAACATTGCTTTTAAACTACATGAACA 57.756 29.630 0.00 0.00 0.00 3.18
8199 10988 9.243637 TGAACATTGCTTTTAAACTACATGAAC 57.756 29.630 0.00 0.00 0.00 3.18
8200 10989 9.243637 GTGAACATTGCTTTTAAACTACATGAA 57.756 29.630 0.00 0.00 0.00 2.57
8201 10990 7.589587 CGTGAACATTGCTTTTAAACTACATGA 59.410 33.333 0.00 0.00 0.00 3.07
8202 10991 7.617122 GCGTGAACATTGCTTTTAAACTACATG 60.617 37.037 0.00 0.00 0.00 3.21
8203 10992 6.362283 GCGTGAACATTGCTTTTAAACTACAT 59.638 34.615 0.00 0.00 0.00 2.29
8204 10993 5.683743 GCGTGAACATTGCTTTTAAACTACA 59.316 36.000 0.00 0.00 0.00 2.74
8205 10994 5.683743 TGCGTGAACATTGCTTTTAAACTAC 59.316 36.000 0.00 0.00 0.00 2.73
8206 10995 5.822278 TGCGTGAACATTGCTTTTAAACTA 58.178 33.333 0.00 0.00 0.00 2.24
8207 10996 4.677584 TGCGTGAACATTGCTTTTAAACT 58.322 34.783 0.00 0.00 0.00 2.66
8208 10997 5.005299 AGTTGCGTGAACATTGCTTTTAAAC 59.995 36.000 0.00 0.00 36.98 2.01
8209 10998 5.105752 AGTTGCGTGAACATTGCTTTTAAA 58.894 33.333 2.86 0.00 36.98 1.52
8210 10999 4.677584 AGTTGCGTGAACATTGCTTTTAA 58.322 34.783 2.86 0.00 36.98 1.52
8211 11000 4.300189 AGTTGCGTGAACATTGCTTTTA 57.700 36.364 2.86 0.00 36.98 1.52
8212 11001 3.163630 AGTTGCGTGAACATTGCTTTT 57.836 38.095 2.86 0.00 36.98 2.27
8213 11002 2.869233 AGTTGCGTGAACATTGCTTT 57.131 40.000 2.86 0.00 36.98 3.51
8214 11003 2.869233 AAGTTGCGTGAACATTGCTT 57.131 40.000 2.86 0.00 36.98 3.91
8215 11004 2.098934 TGAAAGTTGCGTGAACATTGCT 59.901 40.909 2.86 0.00 36.98 3.91
8216 11005 2.458951 TGAAAGTTGCGTGAACATTGC 58.541 42.857 2.86 0.00 36.98 3.56
8217 11006 5.447478 TTTTGAAAGTTGCGTGAACATTG 57.553 34.783 2.86 0.00 36.98 2.82
8260 11049 8.550376 GCATTTATTCAATGTCACAAACAGTTT 58.450 29.630 0.00 0.00 43.95 2.66
8261 11050 7.927629 AGCATTTATTCAATGTCACAAACAGTT 59.072 29.630 0.00 0.00 43.95 3.16
8262 11051 7.436118 AGCATTTATTCAATGTCACAAACAGT 58.564 30.769 0.00 0.00 43.95 3.55
8263 11052 7.878477 AGCATTTATTCAATGTCACAAACAG 57.122 32.000 0.00 0.00 43.95 3.16
8264 11053 9.755804 TTAAGCATTTATTCAATGTCACAAACA 57.244 25.926 0.00 0.00 43.95 2.83
8267 11056 9.979578 AGTTTAAGCATTTATTCAATGTCACAA 57.020 25.926 0.00 0.00 43.95 3.33
8268 11057 9.624697 GAGTTTAAGCATTTATTCAATGTCACA 57.375 29.630 0.00 0.00 43.95 3.58
8269 11058 9.846248 AGAGTTTAAGCATTTATTCAATGTCAC 57.154 29.630 0.00 0.00 43.95 3.67
8270 11059 9.844790 CAGAGTTTAAGCATTTATTCAATGTCA 57.155 29.630 0.00 0.00 43.95 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.