Multiple sequence alignment - TraesCS1B01G297300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G297300 chr1B 100.000 3662 0 0 1 3662 517161452 517157791 0.000000e+00 6763.0
1 TraesCS1B01G297300 chr1B 84.797 296 34 9 3121 3406 4887299 4887593 1.660000e-73 287.0
2 TraesCS1B01G297300 chr1B 89.583 48 5 0 2130 2177 585074075 585074028 1.100000e-05 62.1
3 TraesCS1B01G297300 chr1D 92.992 3011 111 33 4 2955 384979783 384976814 0.000000e+00 4300.0
4 TraesCS1B01G297300 chr1D 93.750 144 9 0 3519 3662 417593551 417593408 2.210000e-52 217.0
5 TraesCS1B01G297300 chr1D 82.422 256 31 11 3220 3470 453402796 453402550 1.030000e-50 211.0
6 TraesCS1B01G297300 chr1D 89.583 48 5 0 2130 2177 433214032 433213985 1.100000e-05 62.1
7 TraesCS1B01G297300 chr1D 97.059 34 1 0 2129 2162 169345510 169345477 1.420000e-04 58.4
8 TraesCS1B01G297300 chr1A 94.843 2385 89 15 194 2552 485033862 485031486 0.000000e+00 3692.0
9 TraesCS1B01G297300 chr1A 91.339 254 11 4 2525 2773 485031483 485031236 1.630000e-88 337.0
10 TraesCS1B01G297300 chr1A 87.500 200 23 1 4 201 485034203 485034004 2.840000e-56 230.0
11 TraesCS1B01G297300 chr1A 89.583 48 5 0 2130 2177 531608799 531608752 1.100000e-05 62.1
12 TraesCS1B01G297300 chr3A 86.618 411 28 13 3121 3508 685824930 685824524 2.610000e-116 429.0
13 TraesCS1B01G297300 chr3A 83.894 416 43 16 3121 3526 411278390 411278791 3.450000e-100 375.0
14 TraesCS1B01G297300 chr3A 81.618 272 26 14 3122 3371 666583159 666583428 1.720000e-48 204.0
15 TraesCS1B01G297300 chr3A 85.714 56 7 1 2129 2184 57944750 57944696 1.420000e-04 58.4
16 TraesCS1B01G297300 chr5D 85.646 418 33 14 3122 3517 60032018 60032430 7.320000e-112 414.0
17 TraesCS1B01G297300 chr5D 83.982 437 37 21 3122 3533 72641313 72641741 4.430000e-104 388.0
18 TraesCS1B01G297300 chr5D 84.450 418 35 17 3126 3520 33866897 33866487 5.740000e-103 385.0
19 TraesCS1B01G297300 chr5D 90.909 44 4 0 2116 2159 368333263 368333306 3.950000e-05 60.2
20 TraesCS1B01G297300 chr2D 85.337 416 34 15 3122 3512 386152944 386153357 4.400000e-109 405.0
21 TraesCS1B01G297300 chr3D 84.670 424 33 18 3125 3519 520803591 520803171 9.530000e-106 394.0
22 TraesCS1B01G297300 chr3D 83.175 422 41 15 3122 3519 36654240 36654655 3.480000e-95 359.0
23 TraesCS1B01G297300 chr3D 87.500 56 6 1 2129 2184 46583453 46583507 3.050000e-06 63.9
24 TraesCS1B01G297300 chr3D 97.059 34 1 0 2129 2162 609739071 609739038 1.420000e-04 58.4
25 TraesCS1B01G297300 chr7D 84.149 429 38 16 3121 3523 223913241 223912817 4.430000e-104 388.0
26 TraesCS1B01G297300 chr4A 83.389 301 33 11 3125 3409 600725642 600725343 2.800000e-66 263.0
27 TraesCS1B01G297300 chr4A 83.721 258 30 9 3125 3372 597770484 597770229 2.200000e-57 233.0
28 TraesCS1B01G297300 chr4A 93.056 144 10 0 3516 3659 236998500 236998643 1.030000e-50 211.0
29 TraesCS1B01G297300 chr4A 93.056 144 10 0 3516 3659 354523823 354523966 1.030000e-50 211.0
30 TraesCS1B01G297300 chr2B 99.306 144 1 0 2803 2946 347903374 347903231 1.010000e-65 261.0
31 TraesCS1B01G297300 chr2B 78.235 170 21 5 3121 3274 574004604 574004773 1.080000e-15 95.3
32 TraesCS1B01G297300 chr2A 82.699 289 42 5 3118 3400 48353864 48354150 2.180000e-62 250.0
33 TraesCS1B01G297300 chr2A 84.279 229 28 5 3122 3343 689723327 689723554 2.210000e-52 217.0
34 TraesCS1B01G297300 chr7A 93.750 144 9 0 3516 3659 200250339 200250482 2.210000e-52 217.0
35 TraesCS1B01G297300 chr7A 93.197 147 10 0 3516 3662 309496487 309496633 2.210000e-52 217.0
36 TraesCS1B01G297300 chr7A 81.347 193 28 4 3125 3309 701677984 701677792 2.280000e-32 150.0
37 TraesCS1B01G297300 chr7A 93.478 46 3 0 2123 2168 712180987 712181032 6.560000e-08 69.4
38 TraesCS1B01G297300 chrUn 92.517 147 11 0 3516 3662 323565120 323565266 1.030000e-50 211.0
39 TraesCS1B01G297300 chr6B 78.421 380 42 19 3111 3466 15252003 15252366 1.030000e-50 211.0
40 TraesCS1B01G297300 chr6B 92.517 147 11 0 3516 3662 79348041 79348187 1.030000e-50 211.0
41 TraesCS1B01G297300 chr6B 85.484 62 9 0 2129 2190 640978732 640978671 8.490000e-07 65.8
42 TraesCS1B01G297300 chr5B 93.056 144 10 0 3519 3662 198193942 198193799 1.030000e-50 211.0
43 TraesCS1B01G297300 chr5B 90.909 44 4 0 2116 2159 436259153 436259196 3.950000e-05 60.2
44 TraesCS1B01G297300 chr3B 93.571 140 9 0 3519 3658 661375911 661375772 3.710000e-50 209.0
45 TraesCS1B01G297300 chr3B 87.500 56 6 1 2129 2184 72953311 72953365 3.050000e-06 63.9
46 TraesCS1B01G297300 chr6A 83.406 229 30 5 3122 3343 14041712 14041939 4.790000e-49 206.0
47 TraesCS1B01G297300 chr6D 79.412 102 19 2 2129 2229 425902620 425902520 1.820000e-08 71.3
48 TraesCS1B01G297300 chr6D 97.059 34 1 0 2129 2162 234731916 234731883 1.420000e-04 58.4
49 TraesCS1B01G297300 chr5A 90.909 44 4 0 2116 2159 470196289 470196332 3.950000e-05 60.2
50 TraesCS1B01G297300 chr4D 97.059 34 1 0 2129 2162 135372773 135372740 1.420000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G297300 chr1B 517157791 517161452 3661 True 6763.000000 6763 100.000000 1 3662 1 chr1B.!!$R1 3661
1 TraesCS1B01G297300 chr1D 384976814 384979783 2969 True 4300.000000 4300 92.992000 4 2955 1 chr1D.!!$R2 2951
2 TraesCS1B01G297300 chr1A 485031236 485034203 2967 True 1419.666667 3692 91.227333 4 2773 3 chr1A.!!$R2 2769

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 76 0.040425 GACCAACACAATCGCCACAC 60.040 55.0 0.00 0.0 0.0 3.82 F
615 780 0.178888 TCCACCACCACCACTATCCA 60.179 55.0 0.00 0.0 0.0 3.41 F
1967 2160 0.250727 CGACTTCAAGGCCTCCCAAA 60.251 55.0 5.23 0.0 0.0 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1241 1415 0.108424 ACTGAATCTGCAGGAGCGAC 60.108 55.0 15.13 0.94 46.23 5.19 R
2604 2834 0.450583 CGTCCTCGTCATCCGAAGAA 59.549 55.0 0.00 0.00 46.75 2.52 R
3542 3784 0.036306 AATCCGCGGTTCTTTCACCT 59.964 50.0 27.15 0.00 34.22 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 4.232221 GGAGTTGTCATGCTTGTCAATTG 58.768 43.478 13.62 0.00 34.28 2.32
54 55 5.061311 GCTTGTCAATTGAATTTGTCATCCG 59.939 40.000 10.35 0.00 35.70 4.18
56 57 3.543494 GTCAATTGAATTTGTCATCCGCG 59.457 43.478 10.35 0.00 35.70 6.46
68 69 0.096976 CATCCGCGACCAACACAATC 59.903 55.000 8.23 0.00 0.00 2.67
74 75 1.502990 CGACCAACACAATCGCCACA 61.503 55.000 0.00 0.00 0.00 4.17
75 76 0.040425 GACCAACACAATCGCCACAC 60.040 55.000 0.00 0.00 0.00 3.82
108 109 0.958822 ATGCTCCCAACAAACGTTCC 59.041 50.000 0.00 0.00 0.00 3.62
117 118 3.319689 CCAACAAACGTTCCCTGGTTAAT 59.680 43.478 0.00 0.00 0.00 1.40
159 162 3.228453 AGAACTACACCGTCTCCAAAGA 58.772 45.455 0.00 0.00 0.00 2.52
227 380 1.737236 CAGCGCTACCTTTTGTGCATA 59.263 47.619 10.99 0.00 41.57 3.14
228 381 2.161410 CAGCGCTACCTTTTGTGCATAA 59.839 45.455 10.99 0.00 41.57 1.90
239 392 5.637387 CCTTTTGTGCATAACCAATTACCAC 59.363 40.000 0.00 0.00 0.00 4.16
253 406 2.642171 TACCACTCCCTGAACTCCAT 57.358 50.000 0.00 0.00 0.00 3.41
268 421 1.759445 CTCCATGGACACCACTCTAGG 59.241 57.143 11.44 0.00 35.80 3.02
335 491 2.027169 GGTTCGTATCCGGCGGAG 59.973 66.667 33.82 20.51 34.05 4.63
588 753 1.684049 CCTTCCTCCTCCGACTGCT 60.684 63.158 0.00 0.00 0.00 4.24
596 761 1.729470 CCTCCGACTGCTGTATCGCT 61.729 60.000 0.00 0.00 37.01 4.93
607 772 1.153429 GTATCGCTCCACCACCACC 60.153 63.158 0.00 0.00 0.00 4.61
610 775 3.941188 CGCTCCACCACCACCACT 61.941 66.667 0.00 0.00 0.00 4.00
611 776 2.579657 CGCTCCACCACCACCACTA 61.580 63.158 0.00 0.00 0.00 2.74
612 777 1.899437 CGCTCCACCACCACCACTAT 61.899 60.000 0.00 0.00 0.00 2.12
614 779 0.541863 CTCCACCACCACCACTATCC 59.458 60.000 0.00 0.00 0.00 2.59
615 780 0.178888 TCCACCACCACCACTATCCA 60.179 55.000 0.00 0.00 0.00 3.41
617 782 0.690192 CACCACCACCACTATCCACA 59.310 55.000 0.00 0.00 0.00 4.17
620 785 1.134098 CCACCACCACTATCCACATCC 60.134 57.143 0.00 0.00 0.00 3.51
621 786 1.839994 CACCACCACTATCCACATCCT 59.160 52.381 0.00 0.00 0.00 3.24
684 849 1.814169 GTTCATTCTCCCCGGCGAC 60.814 63.158 9.30 0.00 0.00 5.19
686 851 3.470888 CATTCTCCCCGGCGACCT 61.471 66.667 9.30 0.00 0.00 3.85
862 1030 4.899239 CATGAGGTCGAGGCGCCC 62.899 72.222 26.15 14.23 0.00 6.13
959 1127 0.872388 GTGTACCTTGGCGTTCTTGG 59.128 55.000 0.00 0.00 0.00 3.61
1241 1415 2.256174 TGTTTAGATTTCCTCGCGACG 58.744 47.619 3.71 0.39 0.00 5.12
1267 1447 4.197750 CTCCTGCAGATTCAGTGCTTAAT 58.802 43.478 17.39 0.00 41.78 1.40
1272 1452 5.702865 TGCAGATTCAGTGCTTAATGAAAC 58.297 37.500 0.00 0.00 41.78 2.78
1481 1670 1.068541 GCTTGCCCTAAACAAGAACCG 60.069 52.381 7.64 0.00 45.99 4.44
1602 1795 2.270352 TCCAAGGCAACATCGAGTTT 57.730 45.000 0.00 0.00 38.74 2.66
1852 2045 1.671054 CTTGCCGCCGGAGAAGAAA 60.671 57.895 7.68 0.00 0.00 2.52
1866 2059 2.028020 AGAAGAAACCGATGGACTGGAC 60.028 50.000 0.00 0.00 0.00 4.02
1945 2138 4.747529 GACCCGCCGGTGGTGTAC 62.748 72.222 31.53 15.79 44.88 2.90
1967 2160 0.250727 CGACTTCAAGGCCTCCCAAA 60.251 55.000 5.23 0.00 0.00 3.28
1970 2163 1.713078 ACTTCAAGGCCTCCCAAATCT 59.287 47.619 5.23 0.00 0.00 2.40
2236 2429 0.881118 TCGTCACCTGGGTACGTAAC 59.119 55.000 18.49 0.70 37.83 2.50
2269 2462 0.815213 CATCACCACGGCCATCGATT 60.815 55.000 2.24 0.00 42.43 3.34
2354 2548 3.743396 CCGAAGTTCAAAGACCAGAAGAG 59.257 47.826 3.32 0.00 0.00 2.85
2460 2654 0.319900 TGCAAGAAGAGGACTGCGTC 60.320 55.000 0.00 0.79 0.00 5.19
2604 2834 2.176140 CTCTGGAAGCTCGTCGTCT 58.824 57.895 0.00 0.00 0.00 4.18
2782 3023 6.590234 TGATGTGTCTGATGTGTAAGTAGT 57.410 37.500 0.00 0.00 0.00 2.73
2820 3062 0.863956 TTGGGGGTGGTTCAGGAAAT 59.136 50.000 0.00 0.00 0.00 2.17
2822 3064 0.407918 GGGGGTGGTTCAGGAAATGA 59.592 55.000 0.00 0.00 35.62 2.57
2841 3083 0.677288 ACCGTGACGATGGAACTTGA 59.323 50.000 6.54 0.00 31.82 3.02
2849 3091 0.672401 GATGGAACTTGAACGGCGGA 60.672 55.000 13.24 0.00 0.00 5.54
2852 3094 2.032071 AACTTGAACGGCGGAGGG 59.968 61.111 13.24 0.00 0.00 4.30
2877 3119 3.580458 AGCAGTCAGGAGTAGACATGTTT 59.420 43.478 0.00 0.00 38.46 2.83
2932 3174 8.526681 GCTAATTTGATTCGTAAAGCATGAAAG 58.473 33.333 0.00 0.00 35.78 2.62
2934 3176 6.567687 TTTGATTCGTAAAGCATGAAAGGA 57.432 33.333 0.00 0.00 35.78 3.36
2937 3179 5.647658 TGATTCGTAAAGCATGAAAGGACAT 59.352 36.000 0.00 0.00 35.78 3.06
2950 3192 7.429340 GCATGAAAGGACATAATTCGTTAGTTG 59.571 37.037 0.00 0.00 0.00 3.16
2955 3197 8.699283 AAGGACATAATTCGTTAGTTGAGTAC 57.301 34.615 0.00 0.00 0.00 2.73
2956 3198 7.833786 AGGACATAATTCGTTAGTTGAGTACA 58.166 34.615 0.00 0.00 0.00 2.90
2957 3199 7.974501 AGGACATAATTCGTTAGTTGAGTACAG 59.025 37.037 0.00 0.00 0.00 2.74
2958 3200 7.758528 GGACATAATTCGTTAGTTGAGTACAGT 59.241 37.037 0.00 0.00 0.00 3.55
2959 3201 9.778993 GACATAATTCGTTAGTTGAGTACAGTA 57.221 33.333 0.00 0.00 0.00 2.74
2991 3233 8.954950 TGAAAAACATGACACAATAAAATGGT 57.045 26.923 0.00 0.00 0.00 3.55
3001 3243 9.460019 TGACACAATAAAATGGTATCATTCTGA 57.540 29.630 0.66 0.00 42.29 3.27
3008 3250 9.754382 ATAAAATGGTATCATTCTGATTTGCAC 57.246 29.630 0.66 0.00 42.29 4.57
3009 3251 4.880886 TGGTATCATTCTGATTTGCACG 57.119 40.909 0.00 0.00 38.26 5.34
3010 3252 3.627123 TGGTATCATTCTGATTTGCACGG 59.373 43.478 0.00 0.00 38.26 4.94
3011 3253 3.876914 GGTATCATTCTGATTTGCACGGA 59.123 43.478 0.00 0.00 38.26 4.69
3012 3254 4.516698 GGTATCATTCTGATTTGCACGGAT 59.483 41.667 0.00 0.00 38.26 4.18
3013 3255 4.563337 ATCATTCTGATTTGCACGGATG 57.437 40.909 0.00 0.00 32.13 3.51
3014 3256 3.243301 ATCATTCTGATTTGCACGGATGC 60.243 43.478 0.00 0.00 42.75 3.91
3015 3257 5.465584 ATCATTCTGATTTGCACGGATGCT 61.466 41.667 0.41 0.00 42.82 3.79
3016 3258 6.896819 ATCATTCTGATTTGCACGGATGCTT 61.897 40.000 0.41 0.00 42.82 3.91
3017 3259 8.600810 ATCATTCTGATTTGCACGGATGCTTC 62.601 42.308 0.41 0.00 42.82 3.86
3026 3268 2.959516 CACGGATGCTTCACACTAAGA 58.040 47.619 1.64 0.00 0.00 2.10
3027 3269 3.325870 CACGGATGCTTCACACTAAGAA 58.674 45.455 1.64 0.00 0.00 2.52
3028 3270 3.935203 CACGGATGCTTCACACTAAGAAT 59.065 43.478 1.64 0.00 0.00 2.40
3029 3271 5.109210 CACGGATGCTTCACACTAAGAATA 58.891 41.667 1.64 0.00 0.00 1.75
3030 3272 5.755375 CACGGATGCTTCACACTAAGAATAT 59.245 40.000 1.64 0.00 0.00 1.28
3031 3273 5.755375 ACGGATGCTTCACACTAAGAATATG 59.245 40.000 1.64 0.00 0.00 1.78
3032 3274 5.755375 CGGATGCTTCACACTAAGAATATGT 59.245 40.000 1.64 0.00 0.00 2.29
3033 3275 6.258727 CGGATGCTTCACACTAAGAATATGTT 59.741 38.462 1.64 0.00 0.00 2.71
3034 3276 7.201644 CGGATGCTTCACACTAAGAATATGTTT 60.202 37.037 1.64 0.00 0.00 2.83
3035 3277 7.912250 GGATGCTTCACACTAAGAATATGTTTG 59.088 37.037 1.64 0.00 0.00 2.93
3036 3278 7.144722 TGCTTCACACTAAGAATATGTTTGG 57.855 36.000 0.00 0.00 0.00 3.28
3037 3279 6.714810 TGCTTCACACTAAGAATATGTTTGGT 59.285 34.615 0.00 0.00 0.00 3.67
3038 3280 7.880713 TGCTTCACACTAAGAATATGTTTGGTA 59.119 33.333 0.00 0.00 0.00 3.25
3039 3281 8.391106 GCTTCACACTAAGAATATGTTTGGTAG 58.609 37.037 0.00 0.00 0.00 3.18
3040 3282 7.843490 TCACACTAAGAATATGTTTGGTAGC 57.157 36.000 0.00 0.00 0.00 3.58
3041 3283 6.821665 TCACACTAAGAATATGTTTGGTAGCC 59.178 38.462 0.00 0.00 0.00 3.93
3042 3284 6.823689 CACACTAAGAATATGTTTGGTAGCCT 59.176 38.462 0.00 0.00 0.00 4.58
3043 3285 7.985184 CACACTAAGAATATGTTTGGTAGCCTA 59.015 37.037 0.00 0.00 0.00 3.93
3044 3286 7.985752 ACACTAAGAATATGTTTGGTAGCCTAC 59.014 37.037 0.00 0.00 0.00 3.18
3045 3287 7.985184 CACTAAGAATATGTTTGGTAGCCTACA 59.015 37.037 3.95 0.00 0.00 2.74
3046 3288 8.714906 ACTAAGAATATGTTTGGTAGCCTACAT 58.285 33.333 3.95 11.98 35.17 2.29
3047 3289 9.209175 CTAAGAATATGTTTGGTAGCCTACATC 57.791 37.037 3.95 1.59 33.80 3.06
3048 3290 6.223852 AGAATATGTTTGGTAGCCTACATCG 58.776 40.000 3.95 0.00 33.80 3.84
3049 3291 5.801531 ATATGTTTGGTAGCCTACATCGA 57.198 39.130 3.95 0.00 33.80 3.59
3050 3292 4.689612 ATGTTTGGTAGCCTACATCGAT 57.310 40.909 3.95 0.00 28.71 3.59
3051 3293 4.481368 TGTTTGGTAGCCTACATCGATT 57.519 40.909 3.95 0.00 0.00 3.34
3052 3294 4.839121 TGTTTGGTAGCCTACATCGATTT 58.161 39.130 3.95 0.00 0.00 2.17
3053 3295 5.250200 TGTTTGGTAGCCTACATCGATTTT 58.750 37.500 3.95 0.00 0.00 1.82
3054 3296 5.708230 TGTTTGGTAGCCTACATCGATTTTT 59.292 36.000 3.95 0.00 0.00 1.94
3055 3297 5.811399 TTGGTAGCCTACATCGATTTTTG 57.189 39.130 3.95 0.00 0.00 2.44
3056 3298 3.625764 TGGTAGCCTACATCGATTTTTGC 59.374 43.478 3.95 0.00 0.00 3.68
3057 3299 3.003378 GGTAGCCTACATCGATTTTTGCC 59.997 47.826 3.95 0.00 0.00 4.52
3058 3300 2.024414 AGCCTACATCGATTTTTGCCC 58.976 47.619 0.00 0.00 0.00 5.36
3059 3301 2.024414 GCCTACATCGATTTTTGCCCT 58.976 47.619 0.00 0.00 0.00 5.19
3060 3302 2.033424 GCCTACATCGATTTTTGCCCTC 59.967 50.000 0.00 0.00 0.00 4.30
3061 3303 3.545703 CCTACATCGATTTTTGCCCTCT 58.454 45.455 0.00 0.00 0.00 3.69
3062 3304 3.947834 CCTACATCGATTTTTGCCCTCTT 59.052 43.478 0.00 0.00 0.00 2.85
3063 3305 3.855689 ACATCGATTTTTGCCCTCTTG 57.144 42.857 0.00 0.00 0.00 3.02
3064 3306 3.157087 ACATCGATTTTTGCCCTCTTGT 58.843 40.909 0.00 0.00 0.00 3.16
3065 3307 4.331968 ACATCGATTTTTGCCCTCTTGTA 58.668 39.130 0.00 0.00 0.00 2.41
3066 3308 4.949856 ACATCGATTTTTGCCCTCTTGTAT 59.050 37.500 0.00 0.00 0.00 2.29
3067 3309 6.119536 ACATCGATTTTTGCCCTCTTGTATA 58.880 36.000 0.00 0.00 0.00 1.47
3068 3310 6.772716 ACATCGATTTTTGCCCTCTTGTATAT 59.227 34.615 0.00 0.00 0.00 0.86
3069 3311 6.618287 TCGATTTTTGCCCTCTTGTATATG 57.382 37.500 0.00 0.00 0.00 1.78
3070 3312 6.119536 TCGATTTTTGCCCTCTTGTATATGT 58.880 36.000 0.00 0.00 0.00 2.29
3071 3313 6.038161 TCGATTTTTGCCCTCTTGTATATGTG 59.962 38.462 0.00 0.00 0.00 3.21
3072 3314 6.038161 CGATTTTTGCCCTCTTGTATATGTGA 59.962 38.462 0.00 0.00 0.00 3.58
3073 3315 6.509418 TTTTTGCCCTCTTGTATATGTGAC 57.491 37.500 0.00 0.00 0.00 3.67
3074 3316 5.435686 TTTGCCCTCTTGTATATGTGACT 57.564 39.130 0.00 0.00 0.00 3.41
3075 3317 6.553953 TTTGCCCTCTTGTATATGTGACTA 57.446 37.500 0.00 0.00 0.00 2.59
3076 3318 6.553953 TTGCCCTCTTGTATATGTGACTAA 57.446 37.500 0.00 0.00 0.00 2.24
3077 3319 6.161855 TGCCCTCTTGTATATGTGACTAAG 57.838 41.667 0.00 0.00 0.00 2.18
3078 3320 5.661312 TGCCCTCTTGTATATGTGACTAAGT 59.339 40.000 0.00 0.00 0.00 2.24
3079 3321 6.156256 TGCCCTCTTGTATATGTGACTAAGTT 59.844 38.462 0.00 0.00 0.00 2.66
3080 3322 6.480320 GCCCTCTTGTATATGTGACTAAGTTG 59.520 42.308 0.00 0.00 0.00 3.16
3081 3323 6.986817 CCCTCTTGTATATGTGACTAAGTTGG 59.013 42.308 0.00 0.00 0.00 3.77
3082 3324 6.986817 CCTCTTGTATATGTGACTAAGTTGGG 59.013 42.308 0.00 0.00 0.00 4.12
3083 3325 6.346096 TCTTGTATATGTGACTAAGTTGGGC 58.654 40.000 0.00 0.00 0.00 5.36
3084 3326 5.031066 TGTATATGTGACTAAGTTGGGCC 57.969 43.478 0.00 0.00 0.00 5.80
3085 3327 4.719773 TGTATATGTGACTAAGTTGGGCCT 59.280 41.667 4.53 0.00 0.00 5.19
3086 3328 2.496899 ATGTGACTAAGTTGGGCCTG 57.503 50.000 4.53 0.00 0.00 4.85
3087 3329 1.429930 TGTGACTAAGTTGGGCCTGA 58.570 50.000 4.53 0.00 0.00 3.86
3088 3330 1.071699 TGTGACTAAGTTGGGCCTGAC 59.928 52.381 4.53 3.54 0.00 3.51
3089 3331 1.348036 GTGACTAAGTTGGGCCTGACT 59.652 52.381 4.53 6.17 0.00 3.41
3090 3332 1.347707 TGACTAAGTTGGGCCTGACTG 59.652 52.381 12.76 5.47 0.00 3.51
3091 3333 1.623811 GACTAAGTTGGGCCTGACTGA 59.376 52.381 12.76 5.85 0.00 3.41
3092 3334 1.625818 ACTAAGTTGGGCCTGACTGAG 59.374 52.381 18.14 18.14 31.73 3.35
3093 3335 1.625818 CTAAGTTGGGCCTGACTGAGT 59.374 52.381 12.76 0.00 0.00 3.41
3094 3336 1.729586 AAGTTGGGCCTGACTGAGTA 58.270 50.000 12.76 0.00 0.00 2.59
3095 3337 1.729586 AGTTGGGCCTGACTGAGTAA 58.270 50.000 4.53 0.00 0.00 2.24
3096 3338 2.054799 AGTTGGGCCTGACTGAGTAAA 58.945 47.619 4.53 0.00 0.00 2.01
3097 3339 2.644798 AGTTGGGCCTGACTGAGTAAAT 59.355 45.455 4.53 0.00 0.00 1.40
3098 3340 3.844211 AGTTGGGCCTGACTGAGTAAATA 59.156 43.478 4.53 0.00 0.00 1.40
3099 3341 3.906720 TGGGCCTGACTGAGTAAATAC 57.093 47.619 4.53 0.00 0.00 1.89
3100 3342 3.450904 TGGGCCTGACTGAGTAAATACT 58.549 45.455 4.53 0.00 39.71 2.12
3101 3343 4.616553 TGGGCCTGACTGAGTAAATACTA 58.383 43.478 4.53 0.00 36.50 1.82
3102 3344 5.027460 TGGGCCTGACTGAGTAAATACTAA 58.973 41.667 4.53 0.00 36.50 2.24
3103 3345 5.486063 TGGGCCTGACTGAGTAAATACTAAA 59.514 40.000 4.53 0.00 36.50 1.85
3104 3346 6.013206 TGGGCCTGACTGAGTAAATACTAAAA 60.013 38.462 4.53 0.00 36.50 1.52
3105 3347 6.539103 GGGCCTGACTGAGTAAATACTAAAAG 59.461 42.308 0.84 0.00 36.50 2.27
3106 3348 6.037281 GGCCTGACTGAGTAAATACTAAAAGC 59.963 42.308 0.00 0.00 36.50 3.51
3107 3349 6.819146 GCCTGACTGAGTAAATACTAAAAGCT 59.181 38.462 0.00 0.00 36.50 3.74
3108 3350 7.980099 GCCTGACTGAGTAAATACTAAAAGCTA 59.020 37.037 0.00 0.00 36.50 3.32
3115 3357 9.378551 TGAGTAAATACTAAAAGCTATGTGTGG 57.621 33.333 0.00 0.00 36.50 4.17
3116 3358 9.595823 GAGTAAATACTAAAAGCTATGTGTGGA 57.404 33.333 0.00 0.00 36.50 4.02
3117 3359 9.379791 AGTAAATACTAAAAGCTATGTGTGGAC 57.620 33.333 0.00 0.00 34.13 4.02
3118 3360 9.158233 GTAAATACTAAAAGCTATGTGTGGACA 57.842 33.333 0.00 0.00 36.22 4.02
3119 3361 8.807948 AAATACTAAAAGCTATGTGTGGACAT 57.192 30.769 0.00 0.00 45.24 3.06
3120 3362 9.899661 AAATACTAAAAGCTATGTGTGGACATA 57.100 29.630 0.00 0.00 41.27 2.29
3121 3363 8.888579 ATACTAAAAGCTATGTGTGGACATAC 57.111 34.615 0.00 0.00 41.27 2.39
3122 3364 6.707290 ACTAAAAGCTATGTGTGGACATACA 58.293 36.000 4.38 4.38 41.27 2.29
3123 3365 6.818644 ACTAAAAGCTATGTGTGGACATACAG 59.181 38.462 7.88 0.00 41.27 2.74
3124 3366 4.826274 AAGCTATGTGTGGACATACAGT 57.174 40.909 7.88 0.36 41.27 3.55
3125 3367 5.932619 AAGCTATGTGTGGACATACAGTA 57.067 39.130 7.88 1.34 41.27 2.74
3126 3368 5.521906 AGCTATGTGTGGACATACAGTAG 57.478 43.478 7.88 9.74 41.27 2.57
3127 3369 4.956700 AGCTATGTGTGGACATACAGTAGT 59.043 41.667 7.88 0.00 41.27 2.73
3128 3370 5.043903 GCTATGTGTGGACATACAGTAGTG 58.956 45.833 7.88 0.00 41.27 2.74
3129 3371 3.313012 TGTGTGGACATACAGTAGTGC 57.687 47.619 0.00 0.00 0.00 4.40
3130 3372 2.630580 TGTGTGGACATACAGTAGTGCA 59.369 45.455 0.00 0.00 33.57 4.57
3131 3373 3.254060 GTGTGGACATACAGTAGTGCAG 58.746 50.000 0.00 0.00 36.75 4.41
3132 3374 3.056821 GTGTGGACATACAGTAGTGCAGA 60.057 47.826 0.00 2.53 36.75 4.26
3133 3375 3.576550 TGTGGACATACAGTAGTGCAGAA 59.423 43.478 0.00 0.00 36.75 3.02
3134 3376 3.927142 GTGGACATACAGTAGTGCAGAAC 59.073 47.826 0.00 0.00 36.75 3.01
3135 3377 3.056107 TGGACATACAGTAGTGCAGAACC 60.056 47.826 0.00 0.00 32.21 3.62
3136 3378 3.179830 GACATACAGTAGTGCAGAACCG 58.820 50.000 0.00 0.00 0.00 4.44
3137 3379 2.094182 ACATACAGTAGTGCAGAACCGG 60.094 50.000 0.00 0.00 0.00 5.28
3138 3380 0.892755 TACAGTAGTGCAGAACCGGG 59.107 55.000 6.32 0.00 0.00 5.73
3139 3381 0.830444 ACAGTAGTGCAGAACCGGGA 60.830 55.000 6.32 0.00 0.00 5.14
3140 3382 0.537188 CAGTAGTGCAGAACCGGGAT 59.463 55.000 6.32 0.00 0.00 3.85
3141 3383 1.066143 CAGTAGTGCAGAACCGGGATT 60.066 52.381 6.32 0.00 0.00 3.01
3142 3384 1.628846 AGTAGTGCAGAACCGGGATTT 59.371 47.619 6.32 0.00 0.00 2.17
3143 3385 2.835764 AGTAGTGCAGAACCGGGATTTA 59.164 45.455 6.32 0.00 0.00 1.40
3144 3386 2.403252 AGTGCAGAACCGGGATTTAG 57.597 50.000 6.32 0.00 0.00 1.85
3145 3387 0.733150 GTGCAGAACCGGGATTTAGC 59.267 55.000 6.32 2.35 0.00 3.09
3146 3388 0.326595 TGCAGAACCGGGATTTAGCA 59.673 50.000 6.32 5.36 0.00 3.49
3147 3389 0.733150 GCAGAACCGGGATTTAGCAC 59.267 55.000 6.32 0.00 0.00 4.40
3148 3390 1.379527 CAGAACCGGGATTTAGCACC 58.620 55.000 6.32 0.00 0.00 5.01
3149 3391 0.107848 AGAACCGGGATTTAGCACCG 60.108 55.000 6.32 0.00 46.79 4.94
3152 3394 4.629779 CGGGATTTAGCACCGGTT 57.370 55.556 2.97 0.00 43.69 4.44
3153 3395 2.390427 CGGGATTTAGCACCGGTTC 58.610 57.895 2.97 0.00 43.69 3.62
3154 3396 1.426041 CGGGATTTAGCACCGGTTCG 61.426 60.000 2.97 0.00 43.69 3.95
3155 3397 0.392060 GGGATTTAGCACCGGTTCGT 60.392 55.000 2.97 0.00 0.00 3.85
3156 3398 1.134729 GGGATTTAGCACCGGTTCGTA 60.135 52.381 2.97 0.00 0.00 3.43
3157 3399 2.620242 GGATTTAGCACCGGTTCGTAA 58.380 47.619 2.97 0.00 0.00 3.18
3158 3400 2.606272 GGATTTAGCACCGGTTCGTAAG 59.394 50.000 2.97 0.00 0.00 2.34
3159 3401 2.083167 TTTAGCACCGGTTCGTAAGG 57.917 50.000 2.97 0.00 38.47 2.69
3160 3402 0.390209 TTAGCACCGGTTCGTAAGGC 60.390 55.000 2.97 2.83 38.47 4.35
3161 3403 2.229690 TAGCACCGGTTCGTAAGGCC 62.230 60.000 2.97 0.00 38.47 5.19
3162 3404 2.435410 CACCGGTTCGTAAGGCCC 60.435 66.667 2.97 0.00 38.47 5.80
3163 3405 2.605601 ACCGGTTCGTAAGGCCCT 60.606 61.111 0.00 0.00 38.47 5.19
3164 3406 2.219164 ACCGGTTCGTAAGGCCCTT 61.219 57.895 0.00 0.00 38.47 3.95
3165 3407 1.002990 CCGGTTCGTAAGGCCCTTT 60.003 57.895 0.00 0.00 38.47 3.11
3166 3408 0.249955 CCGGTTCGTAAGGCCCTTTA 59.750 55.000 0.00 0.00 38.47 1.85
3167 3409 1.648504 CGGTTCGTAAGGCCCTTTAG 58.351 55.000 0.00 0.00 38.47 1.85
3168 3410 1.066645 CGGTTCGTAAGGCCCTTTAGT 60.067 52.381 0.00 0.00 38.47 2.24
3169 3411 2.353323 GGTTCGTAAGGCCCTTTAGTG 58.647 52.381 0.00 0.00 38.47 2.74
3170 3412 1.736126 GTTCGTAAGGCCCTTTAGTGC 59.264 52.381 0.00 0.00 38.47 4.40
3175 3417 2.035155 GGCCCTTTAGTGCCGGTT 59.965 61.111 1.90 0.00 38.00 4.44
3176 3418 2.044555 GGCCCTTTAGTGCCGGTTC 61.045 63.158 1.90 0.00 38.00 3.62
3177 3419 1.302993 GCCCTTTAGTGCCGGTTCA 60.303 57.895 1.90 0.00 0.00 3.18
3178 3420 1.305930 GCCCTTTAGTGCCGGTTCAG 61.306 60.000 1.90 0.00 0.00 3.02
3179 3421 1.305930 CCCTTTAGTGCCGGTTCAGC 61.306 60.000 1.90 0.00 0.00 4.26
3180 3422 0.605319 CCTTTAGTGCCGGTTCAGCA 60.605 55.000 1.90 0.00 38.08 4.41
3181 3423 1.234821 CTTTAGTGCCGGTTCAGCAA 58.765 50.000 1.90 0.00 43.02 3.91
3182 3424 0.948678 TTTAGTGCCGGTTCAGCAAC 59.051 50.000 1.90 0.00 43.02 4.17
3219 3461 4.084147 CCCTCCCCCTGTACCGGA 62.084 72.222 9.46 0.00 0.00 5.14
3220 3462 2.762875 CCTCCCCCTGTACCGGAC 60.763 72.222 9.46 2.18 0.00 4.79
3221 3463 2.762875 CTCCCCCTGTACCGGACC 60.763 72.222 9.46 0.00 0.00 4.46
3222 3464 4.764771 TCCCCCTGTACCGGACCG 62.765 72.222 9.46 6.99 0.00 4.79
3226 3468 4.446413 CCTGTACCGGACCGCCAC 62.446 72.222 9.46 8.75 0.00 5.01
3227 3469 3.379445 CTGTACCGGACCGCCACT 61.379 66.667 9.46 0.00 0.00 4.00
3228 3470 2.035469 TGTACCGGACCGCCACTA 59.965 61.111 9.46 0.00 0.00 2.74
3229 3471 1.597797 CTGTACCGGACCGCCACTAA 61.598 60.000 9.46 0.00 0.00 2.24
3230 3472 1.184322 TGTACCGGACCGCCACTAAA 61.184 55.000 9.46 0.00 0.00 1.85
3231 3473 0.459063 GTACCGGACCGCCACTAAAG 60.459 60.000 9.46 0.00 0.00 1.85
3232 3474 1.606885 TACCGGACCGCCACTAAAGG 61.607 60.000 9.46 0.00 0.00 3.11
3233 3475 2.125269 CGGACCGCCACTAAAGGG 60.125 66.667 0.00 0.00 0.00 3.95
3239 3481 2.438795 GCCACTAAAGGGCCACCA 59.561 61.111 6.18 0.00 45.87 4.17
3240 3482 1.977009 GCCACTAAAGGGCCACCAC 60.977 63.158 6.18 0.00 45.87 4.16
3241 3483 1.674322 CCACTAAAGGGCCACCACG 60.674 63.158 6.18 0.00 40.13 4.94
3242 3484 1.072505 CACTAAAGGGCCACCACGT 59.927 57.895 6.18 0.00 40.13 4.49
3243 3485 1.072505 ACTAAAGGGCCACCACGTG 59.927 57.895 9.08 9.08 40.13 4.49
3287 3529 3.175109 GGAGACCATTAGTACCGGTTG 57.825 52.381 15.04 3.82 31.63 3.77
3288 3530 2.159000 GGAGACCATTAGTACCGGTTGG 60.159 54.545 15.04 17.37 42.84 3.77
3311 3553 7.373778 GGTAACACCAACTGATACTAAAAGG 57.626 40.000 0.00 0.00 38.42 3.11
3312 3554 6.938596 GGTAACACCAACTGATACTAAAAGGT 59.061 38.462 0.00 0.00 38.42 3.50
3313 3555 7.446319 GGTAACACCAACTGATACTAAAAGGTT 59.554 37.037 0.00 0.00 38.42 3.50
3314 3556 7.891498 AACACCAACTGATACTAAAAGGTTT 57.109 32.000 0.00 0.00 0.00 3.27
3315 3557 8.983702 AACACCAACTGATACTAAAAGGTTTA 57.016 30.769 0.00 0.00 0.00 2.01
3316 3558 8.617290 ACACCAACTGATACTAAAAGGTTTAG 57.383 34.615 6.27 6.27 0.00 1.85
3317 3559 7.664318 ACACCAACTGATACTAAAAGGTTTAGG 59.336 37.037 11.39 0.00 0.00 2.69
3318 3560 7.120726 CACCAACTGATACTAAAAGGTTTAGGG 59.879 40.741 11.39 4.19 0.00 3.53
3319 3561 6.602009 CCAACTGATACTAAAAGGTTTAGGGG 59.398 42.308 11.39 1.60 0.00 4.79
3320 3562 6.964876 ACTGATACTAAAAGGTTTAGGGGT 57.035 37.500 11.39 0.00 0.00 4.95
3321 3563 7.339177 ACTGATACTAAAAGGTTTAGGGGTT 57.661 36.000 11.39 0.00 0.00 4.11
3322 3564 7.762610 ACTGATACTAAAAGGTTTAGGGGTTT 58.237 34.615 11.39 0.00 0.00 3.27
3323 3565 8.229605 ACTGATACTAAAAGGTTTAGGGGTTTT 58.770 33.333 11.39 0.00 0.00 2.43
3324 3566 8.411991 TGATACTAAAAGGTTTAGGGGTTTTG 57.588 34.615 11.39 0.00 0.00 2.44
3325 3567 7.452189 TGATACTAAAAGGTTTAGGGGTTTTGG 59.548 37.037 11.39 0.00 0.00 3.28
3326 3568 5.531198 ACTAAAAGGTTTAGGGGTTTTGGT 58.469 37.500 11.39 0.00 31.18 3.67
3327 3569 5.965705 ACTAAAAGGTTTAGGGGTTTTGGTT 59.034 36.000 11.39 0.00 31.79 3.67
3328 3570 5.782677 AAAAGGTTTAGGGGTTTTGGTTT 57.217 34.783 0.00 0.00 0.00 3.27
3329 3571 5.782677 AAAGGTTTAGGGGTTTTGGTTTT 57.217 34.783 0.00 0.00 0.00 2.43
3330 3572 6.887886 AAAGGTTTAGGGGTTTTGGTTTTA 57.112 33.333 0.00 0.00 0.00 1.52
3331 3573 7.454553 AAAGGTTTAGGGGTTTTGGTTTTAT 57.545 32.000 0.00 0.00 0.00 1.40
3332 3574 7.454553 AAGGTTTAGGGGTTTTGGTTTTATT 57.545 32.000 0.00 0.00 0.00 1.40
3333 3575 8.564364 AAGGTTTAGGGGTTTTGGTTTTATTA 57.436 30.769 0.00 0.00 0.00 0.98
3334 3576 8.745149 AGGTTTAGGGGTTTTGGTTTTATTAT 57.255 30.769 0.00 0.00 0.00 1.28
3335 3577 9.173231 AGGTTTAGGGGTTTTGGTTTTATTATT 57.827 29.630 0.00 0.00 0.00 1.40
3336 3578 9.796180 GGTTTAGGGGTTTTGGTTTTATTATTT 57.204 29.630 0.00 0.00 0.00 1.40
3401 3643 9.438228 TCATTTGTTGGTATTTTACGATACTCA 57.562 29.630 0.00 0.00 33.86 3.41
3413 3655 9.740239 ATTTTACGATACTCATATTGTACACGT 57.260 29.630 0.00 0.21 37.38 4.49
3414 3656 9.571810 TTTTACGATACTCATATTGTACACGTT 57.428 29.630 16.49 0.00 37.38 3.99
3417 3659 8.723777 ACGATACTCATATTGTACACGTTATG 57.276 34.615 0.00 4.33 34.15 1.90
3418 3660 7.325338 ACGATACTCATATTGTACACGTTATGC 59.675 37.037 0.00 0.00 34.15 3.14
3419 3661 7.325097 CGATACTCATATTGTACACGTTATGCA 59.675 37.037 0.00 0.00 0.00 3.96
3420 3662 9.140286 GATACTCATATTGTACACGTTATGCAT 57.860 33.333 3.79 3.79 0.00 3.96
3431 3673 9.968870 TGTACACGTTATGCATATATAAACAGA 57.031 29.630 7.36 0.00 0.00 3.41
3447 3689 5.840940 AAACAGAATTTCTCGTAGAACCG 57.159 39.130 0.00 0.00 33.26 4.44
3448 3690 4.778534 ACAGAATTTCTCGTAGAACCGA 57.221 40.909 0.00 0.00 33.26 4.69
3449 3691 5.326200 ACAGAATTTCTCGTAGAACCGAT 57.674 39.130 0.00 0.00 33.26 4.18
3450 3692 5.341617 ACAGAATTTCTCGTAGAACCGATC 58.658 41.667 0.00 0.00 33.26 3.69
3451 3693 5.125739 ACAGAATTTCTCGTAGAACCGATCT 59.874 40.000 0.00 0.00 42.48 2.75
3452 3694 6.318144 ACAGAATTTCTCGTAGAACCGATCTA 59.682 38.462 0.00 0.00 39.71 1.98
3453 3695 7.013464 ACAGAATTTCTCGTAGAACCGATCTAT 59.987 37.037 0.00 0.00 42.51 1.98
3454 3696 7.324856 CAGAATTTCTCGTAGAACCGATCTATG 59.675 40.741 0.00 9.78 45.40 2.23
3455 3697 6.636562 ATTTCTCGTAGAACCGATCTATGT 57.363 37.500 13.65 0.00 44.67 2.29
3456 3698 7.741027 ATTTCTCGTAGAACCGATCTATGTA 57.259 36.000 13.65 5.08 44.67 2.29
3457 3699 7.741027 TTTCTCGTAGAACCGATCTATGTAT 57.259 36.000 13.65 0.00 44.67 2.29
3458 3700 8.837788 TTTCTCGTAGAACCGATCTATGTATA 57.162 34.615 13.65 3.14 44.67 1.47
3459 3701 9.445878 TTTCTCGTAGAACCGATCTATGTATAT 57.554 33.333 13.65 0.00 44.67 0.86
3487 3729 6.974932 ATATATCATCAAATGTCTCGCACC 57.025 37.500 0.00 0.00 0.00 5.01
3488 3730 2.470983 TCATCAAATGTCTCGCACCA 57.529 45.000 0.00 0.00 0.00 4.17
3489 3731 2.076100 TCATCAAATGTCTCGCACCAC 58.924 47.619 0.00 0.00 0.00 4.16
3490 3732 1.131126 CATCAAATGTCTCGCACCACC 59.869 52.381 0.00 0.00 0.00 4.61
3491 3733 0.107643 TCAAATGTCTCGCACCACCA 59.892 50.000 0.00 0.00 0.00 4.17
3492 3734 1.167851 CAAATGTCTCGCACCACCAT 58.832 50.000 0.00 0.00 0.00 3.55
3493 3735 1.541147 CAAATGTCTCGCACCACCATT 59.459 47.619 0.00 0.00 0.00 3.16
3494 3736 1.453155 AATGTCTCGCACCACCATTC 58.547 50.000 0.00 0.00 0.00 2.67
3495 3737 0.324614 ATGTCTCGCACCACCATTCA 59.675 50.000 0.00 0.00 0.00 2.57
3496 3738 0.602638 TGTCTCGCACCACCATTCAC 60.603 55.000 0.00 0.00 0.00 3.18
3497 3739 0.602638 GTCTCGCACCACCATTCACA 60.603 55.000 0.00 0.00 0.00 3.58
3498 3740 0.602638 TCTCGCACCACCATTCACAC 60.603 55.000 0.00 0.00 0.00 3.82
3499 3741 0.884259 CTCGCACCACCATTCACACA 60.884 55.000 0.00 0.00 0.00 3.72
3500 3742 0.250684 TCGCACCACCATTCACACAT 60.251 50.000 0.00 0.00 0.00 3.21
3501 3743 1.002544 TCGCACCACCATTCACACATA 59.997 47.619 0.00 0.00 0.00 2.29
3502 3744 1.130373 CGCACCACCATTCACACATAC 59.870 52.381 0.00 0.00 0.00 2.39
3503 3745 2.158559 GCACCACCATTCACACATACA 58.841 47.619 0.00 0.00 0.00 2.29
3504 3746 2.095263 GCACCACCATTCACACATACAC 60.095 50.000 0.00 0.00 0.00 2.90
3505 3747 3.145286 CACCACCATTCACACATACACA 58.855 45.455 0.00 0.00 0.00 3.72
3506 3748 3.058293 CACCACCATTCACACATACACAC 60.058 47.826 0.00 0.00 0.00 3.82
3507 3749 3.145286 CCACCATTCACACATACACACA 58.855 45.455 0.00 0.00 0.00 3.72
3508 3750 3.758023 CCACCATTCACACATACACACAT 59.242 43.478 0.00 0.00 0.00 3.21
3509 3751 4.379708 CCACCATTCACACATACACACATG 60.380 45.833 0.00 0.00 0.00 3.21
3510 3752 4.216042 CACCATTCACACATACACACATGT 59.784 41.667 0.00 0.00 43.30 3.21
3511 3753 5.411053 CACCATTCACACATACACACATGTA 59.589 40.000 0.00 0.00 45.37 2.29
3512 3754 5.411361 ACCATTCACACATACACACATGTAC 59.589 40.000 0.00 0.00 44.11 2.90
3513 3755 5.643348 CCATTCACACATACACACATGTACT 59.357 40.000 0.00 0.00 44.11 2.73
3514 3756 6.816140 CCATTCACACATACACACATGTACTA 59.184 38.462 0.00 0.00 44.11 1.82
3515 3757 7.495606 CCATTCACACATACACACATGTACTAT 59.504 37.037 0.00 0.00 44.11 2.12
3516 3758 9.528018 CATTCACACATACACACATGTACTATA 57.472 33.333 0.00 0.00 44.11 1.31
3555 3797 7.611213 ATTAAATCACTAGGTGAAAGAACCG 57.389 36.000 4.46 0.00 45.96 4.44
3556 3798 2.450609 TCACTAGGTGAAAGAACCGC 57.549 50.000 0.00 0.00 45.53 5.68
3557 3799 1.068474 CACTAGGTGAAAGAACCGCG 58.932 55.000 0.00 0.00 45.53 6.46
3558 3800 0.037605 ACTAGGTGAAAGAACCGCGG 60.038 55.000 26.86 26.86 45.53 6.46
3559 3801 0.245539 CTAGGTGAAAGAACCGCGGA 59.754 55.000 35.90 3.57 45.53 5.54
3560 3802 0.899720 TAGGTGAAAGAACCGCGGAT 59.100 50.000 35.90 23.25 45.53 4.18
3561 3803 0.036306 AGGTGAAAGAACCGCGGATT 59.964 50.000 35.90 22.26 45.53 3.01
3562 3804 1.276989 AGGTGAAAGAACCGCGGATTA 59.723 47.619 35.90 7.54 45.53 1.75
3563 3805 1.664151 GGTGAAAGAACCGCGGATTAG 59.336 52.381 35.90 4.58 0.00 1.73
3564 3806 2.344025 GTGAAAGAACCGCGGATTAGT 58.656 47.619 35.90 14.04 0.00 2.24
3565 3807 2.740447 GTGAAAGAACCGCGGATTAGTT 59.260 45.455 35.90 16.07 0.00 2.24
3566 3808 3.187842 GTGAAAGAACCGCGGATTAGTTT 59.812 43.478 35.90 21.75 0.00 2.66
3567 3809 3.434299 TGAAAGAACCGCGGATTAGTTTC 59.566 43.478 35.90 27.63 0.00 2.78
3568 3810 2.754946 AGAACCGCGGATTAGTTTCA 57.245 45.000 35.90 0.00 0.00 2.69
3569 3811 3.048337 AGAACCGCGGATTAGTTTCAA 57.952 42.857 35.90 0.00 0.00 2.69
3570 3812 3.000727 AGAACCGCGGATTAGTTTCAAG 58.999 45.455 35.90 0.00 0.00 3.02
3571 3813 2.467566 ACCGCGGATTAGTTTCAAGT 57.532 45.000 35.90 0.00 0.00 3.16
3572 3814 3.598019 ACCGCGGATTAGTTTCAAGTA 57.402 42.857 35.90 0.00 0.00 2.24
3573 3815 3.518590 ACCGCGGATTAGTTTCAAGTAG 58.481 45.455 35.90 0.00 0.00 2.57
3574 3816 3.194116 ACCGCGGATTAGTTTCAAGTAGA 59.806 43.478 35.90 0.00 0.00 2.59
3575 3817 4.142004 ACCGCGGATTAGTTTCAAGTAGAT 60.142 41.667 35.90 0.00 0.00 1.98
3576 3818 4.209288 CCGCGGATTAGTTTCAAGTAGATG 59.791 45.833 24.07 0.00 0.00 2.90
3577 3819 4.209288 CGCGGATTAGTTTCAAGTAGATGG 59.791 45.833 0.00 0.00 0.00 3.51
3578 3820 5.357257 GCGGATTAGTTTCAAGTAGATGGA 58.643 41.667 0.00 0.00 0.00 3.41
3579 3821 5.992217 GCGGATTAGTTTCAAGTAGATGGAT 59.008 40.000 0.00 0.00 0.00 3.41
3580 3822 6.146347 GCGGATTAGTTTCAAGTAGATGGATC 59.854 42.308 0.00 0.00 0.00 3.36
3581 3823 6.647067 CGGATTAGTTTCAAGTAGATGGATCC 59.353 42.308 4.20 4.20 0.00 3.36
3582 3824 7.472100 CGGATTAGTTTCAAGTAGATGGATCCT 60.472 40.741 14.23 0.00 0.00 3.24
3583 3825 8.871125 GGATTAGTTTCAAGTAGATGGATCCTA 58.129 37.037 14.23 0.00 0.00 2.94
3586 3828 7.741554 AGTTTCAAGTAGATGGATCCTAAGT 57.258 36.000 14.23 0.00 0.00 2.24
3587 3829 7.560368 AGTTTCAAGTAGATGGATCCTAAGTG 58.440 38.462 14.23 2.46 0.00 3.16
3588 3830 7.400339 AGTTTCAAGTAGATGGATCCTAAGTGA 59.600 37.037 14.23 4.79 0.00 3.41
3589 3831 7.921041 TTCAAGTAGATGGATCCTAAGTGAT 57.079 36.000 14.23 0.00 0.00 3.06
3590 3832 7.531857 TCAAGTAGATGGATCCTAAGTGATC 57.468 40.000 14.23 6.35 40.37 2.92
3591 3833 7.069344 TCAAGTAGATGGATCCTAAGTGATCA 58.931 38.462 14.23 0.00 42.41 2.92
3592 3834 7.565029 TCAAGTAGATGGATCCTAAGTGATCAA 59.435 37.037 14.23 0.00 42.41 2.57
3593 3835 7.537596 AGTAGATGGATCCTAAGTGATCAAG 57.462 40.000 14.23 0.00 42.41 3.02
3594 3836 7.072562 AGTAGATGGATCCTAAGTGATCAAGT 58.927 38.462 14.23 0.00 42.41 3.16
3595 3837 8.228206 AGTAGATGGATCCTAAGTGATCAAGTA 58.772 37.037 14.23 0.00 42.41 2.24
3596 3838 7.921041 AGATGGATCCTAAGTGATCAAGTAA 57.079 36.000 14.23 0.00 42.41 2.24
3597 3839 8.503428 AGATGGATCCTAAGTGATCAAGTAAT 57.497 34.615 14.23 0.00 42.41 1.89
3598 3840 8.373981 AGATGGATCCTAAGTGATCAAGTAATG 58.626 37.037 14.23 0.00 42.41 1.90
3599 3841 7.675161 TGGATCCTAAGTGATCAAGTAATGA 57.325 36.000 14.23 0.00 42.41 2.57
3600 3842 8.089625 TGGATCCTAAGTGATCAAGTAATGAA 57.910 34.615 14.23 0.00 42.54 2.57
3601 3843 8.717717 TGGATCCTAAGTGATCAAGTAATGAAT 58.282 33.333 14.23 0.00 42.54 2.57
3602 3844 9.566432 GGATCCTAAGTGATCAAGTAATGAATT 57.434 33.333 3.84 0.00 42.54 2.17
3629 3871 9.857656 ATTGTAATAATCCATGAGTTGATCACT 57.142 29.630 0.00 0.00 41.91 3.41
3630 3872 9.685276 TTGTAATAATCCATGAGTTGATCACTT 57.315 29.630 0.00 0.00 41.91 3.16
3633 3875 8.915057 AATAATCCATGAGTTGATCACTTAGG 57.085 34.615 0.00 0.00 41.91 2.69
3634 3876 6.566079 AATCCATGAGTTGATCACTTAGGA 57.434 37.500 0.00 5.98 41.91 2.94
3635 3877 6.760440 ATCCATGAGTTGATCACTTAGGAT 57.240 37.500 0.00 7.78 41.91 3.24
3636 3878 6.166984 TCCATGAGTTGATCACTTAGGATC 57.833 41.667 0.00 0.00 41.91 3.36
3637 3879 5.070981 TCCATGAGTTGATCACTTAGGATCC 59.929 44.000 2.48 2.48 41.91 3.36
3638 3880 5.163269 CCATGAGTTGATCACTTAGGATCCA 60.163 44.000 15.82 0.00 41.91 3.41
3639 3881 6.465464 CCATGAGTTGATCACTTAGGATCCAT 60.465 42.308 15.82 1.47 41.91 3.41
3640 3882 6.166984 TGAGTTGATCACTTAGGATCCATC 57.833 41.667 15.82 7.52 42.41 3.51
3641 3883 5.070981 TGAGTTGATCACTTAGGATCCATCC 59.929 44.000 15.82 0.00 42.41 3.51
3642 3884 4.971282 AGTTGATCACTTAGGATCCATCCA 59.029 41.667 15.82 0.00 40.43 3.41
3643 3885 5.163258 AGTTGATCACTTAGGATCCATCCAC 60.163 44.000 15.82 8.81 40.43 4.02
3644 3886 7.324523 AGTTGATCACTTAGGATCCATCCACT 61.325 42.308 15.82 10.89 40.43 4.00
3645 3887 8.739667 AGTTGATCACTTAGGATCCATCCACTT 61.740 40.741 15.82 0.00 40.43 3.16
3655 3897 6.625873 GGATCCATCCACTTGAAACTAATC 57.374 41.667 6.95 0.00 46.38 1.75
3656 3898 5.532779 GGATCCATCCACTTGAAACTAATCC 59.467 44.000 6.95 0.00 46.38 3.01
3657 3899 4.513442 TCCATCCACTTGAAACTAATCCG 58.487 43.478 0.00 0.00 0.00 4.18
3658 3900 3.065371 CCATCCACTTGAAACTAATCCGC 59.935 47.826 0.00 0.00 0.00 5.54
3659 3901 3.410631 TCCACTTGAAACTAATCCGCA 57.589 42.857 0.00 0.00 0.00 5.69
3660 3902 3.334691 TCCACTTGAAACTAATCCGCAG 58.665 45.455 0.00 0.00 0.00 5.18
3661 3903 3.074412 CCACTTGAAACTAATCCGCAGT 58.926 45.455 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.218417 ACTCCGTCCCAATTCAATTTTCTG 59.782 41.667 0.00 0.00 0.00 3.02
1 2 4.407365 ACTCCGTCCCAATTCAATTTTCT 58.593 39.130 0.00 0.00 0.00 2.52
2 3 4.783764 ACTCCGTCCCAATTCAATTTTC 57.216 40.909 0.00 0.00 0.00 2.29
14 15 0.321653 AAGCATGACAACTCCGTCCC 60.322 55.000 0.00 0.00 34.88 4.46
15 16 0.798776 CAAGCATGACAACTCCGTCC 59.201 55.000 0.00 0.00 34.88 4.79
41 42 1.083489 TGGTCGCGGATGACAAATTC 58.917 50.000 6.13 0.00 40.72 2.17
56 57 0.040425 GTGTGGCGATTGTGTTGGTC 60.040 55.000 0.00 0.00 0.00 4.02
74 75 3.399879 GCATGGAAAATGCGAACGT 57.600 47.368 0.00 0.00 35.17 3.99
165 168 1.153823 CGTCTTGAATCCGCGTCCT 60.154 57.895 4.92 0.00 0.00 3.85
172 175 1.523758 AACTGTGCCGTCTTGAATCC 58.476 50.000 0.00 0.00 0.00 3.01
211 364 4.513198 TTGGTTATGCACAAAAGGTAGC 57.487 40.909 0.00 0.00 0.00 3.58
227 380 3.397955 AGTTCAGGGAGTGGTAATTGGTT 59.602 43.478 0.00 0.00 0.00 3.67
228 381 2.986728 AGTTCAGGGAGTGGTAATTGGT 59.013 45.455 0.00 0.00 0.00 3.67
253 406 3.428532 GAACTACCTAGAGTGGTGTCCA 58.571 50.000 0.00 0.00 39.66 4.02
335 491 0.396974 TCCCCCTGCATGTTTATGGC 60.397 55.000 0.00 0.00 34.79 4.40
336 492 1.402787 GTCCCCCTGCATGTTTATGG 58.597 55.000 0.00 0.00 34.79 2.74
349 505 1.766461 ACCTCCATGATCGTCCCCC 60.766 63.158 0.00 0.00 0.00 5.40
400 562 4.361971 AGGGAGGCGTCGTGGAGA 62.362 66.667 0.00 0.00 0.00 3.71
588 753 1.594833 GTGGTGGTGGAGCGATACA 59.405 57.895 0.00 0.00 0.00 2.29
596 761 0.178888 TGGATAGTGGTGGTGGTGGA 60.179 55.000 0.00 0.00 0.00 4.02
607 772 3.056962 CGATGGAGAGGATGTGGATAGTG 60.057 52.174 0.00 0.00 0.00 2.74
610 775 3.525800 TCGATGGAGAGGATGTGGATA 57.474 47.619 0.00 0.00 0.00 2.59
611 776 2.388526 TCGATGGAGAGGATGTGGAT 57.611 50.000 0.00 0.00 0.00 3.41
612 777 2.158400 AGATCGATGGAGAGGATGTGGA 60.158 50.000 0.54 0.00 0.00 4.02
614 779 2.095314 CGAGATCGATGGAGAGGATGTG 60.095 54.545 0.54 0.00 43.02 3.21
615 780 2.158559 CGAGATCGATGGAGAGGATGT 58.841 52.381 0.54 0.00 43.02 3.06
617 782 1.074727 ACCGAGATCGATGGAGAGGAT 59.925 52.381 0.54 0.00 43.02 3.24
620 785 0.515127 CGACCGAGATCGATGGAGAG 59.485 60.000 0.54 0.00 45.13 3.20
621 786 0.106149 TCGACCGAGATCGATGGAGA 59.894 55.000 0.54 1.11 45.84 3.71
827 995 1.451387 GGAACGCCATCAATCCCGT 60.451 57.895 0.00 0.00 35.14 5.28
881 1049 4.284860 TGCCGGCGATCATCGAGG 62.285 66.667 23.90 14.17 43.74 4.63
1200 1368 4.173924 GCAGAGGAGGCCAGCTCC 62.174 72.222 5.01 2.74 41.15 4.70
1203 1371 1.303970 AAAAGCAGAGGAGGCCAGC 60.304 57.895 5.01 0.00 0.00 4.85
1241 1415 0.108424 ACTGAATCTGCAGGAGCGAC 60.108 55.000 15.13 0.94 46.23 5.19
1272 1452 0.249197 TCGCTCTCTGCATGAATCGG 60.249 55.000 0.00 0.00 43.06 4.18
1481 1670 9.351570 CACATATCTATGGCGATCATATCATAC 57.648 37.037 2.50 0.00 37.67 2.39
1602 1795 1.251527 GCTTGGAGACCTCGGTCAGA 61.252 60.000 17.68 0.00 46.76 3.27
1852 2045 1.183030 TTGTCGTCCAGTCCATCGGT 61.183 55.000 0.00 0.00 0.00 4.69
1855 2048 0.895530 TCCTTGTCGTCCAGTCCATC 59.104 55.000 0.00 0.00 0.00 3.51
1866 2059 1.026718 GGCCACCTTCATCCTTGTCG 61.027 60.000 0.00 0.00 0.00 4.35
1897 2090 2.689034 AGGTACTCCAGCCCCTGC 60.689 66.667 0.00 0.00 35.89 4.85
1906 2099 1.997669 CTTTCTCGTGCAGGTACTCC 58.002 55.000 6.26 0.00 34.60 3.85
2236 2429 1.091771 GTGATGGATGCGGTGGTGAG 61.092 60.000 0.00 0.00 0.00 3.51
2269 2462 0.665835 AGCAAAAATTGTCGACGCCA 59.334 45.000 11.62 0.00 0.00 5.69
2280 2474 6.451393 TCGCACAACCTTAATTAGCAAAAAT 58.549 32.000 0.00 0.00 0.00 1.82
2354 2548 2.289945 GGGTCCACCAGCTCATGATATC 60.290 54.545 0.00 0.00 39.85 1.63
2460 2654 4.873810 TCGCCCATCATTGGCCGG 62.874 66.667 0.00 0.00 43.80 6.13
2604 2834 0.450583 CGTCCTCGTCATCCGAAGAA 59.549 55.000 0.00 0.00 46.75 2.52
2631 2861 0.176910 CTTCTTCTTCCTCCTCGCCC 59.823 60.000 0.00 0.00 0.00 6.13
2633 2863 1.470805 GCTCTTCTTCTTCCTCCTCGC 60.471 57.143 0.00 0.00 0.00 5.03
2634 2864 1.821753 TGCTCTTCTTCTTCCTCCTCG 59.178 52.381 0.00 0.00 0.00 4.63
2782 3023 8.288812 ACCCCCAAAATCAATTCATCTATAGAA 58.711 33.333 6.52 0.00 0.00 2.10
2820 3062 0.677288 AAGTTCCATCGTCACGGTCA 59.323 50.000 0.00 0.00 0.00 4.02
2822 3064 0.677288 TCAAGTTCCATCGTCACGGT 59.323 50.000 0.00 0.00 0.00 4.83
2849 3091 0.409876 TACTCCTGACTGCTGACCCT 59.590 55.000 0.00 0.00 0.00 4.34
2852 3094 2.163509 TGTCTACTCCTGACTGCTGAC 58.836 52.381 0.00 0.00 35.63 3.51
2904 3146 7.534282 TCATGCTTTACGAATCAAATTAGCAA 58.466 30.769 0.00 0.00 32.26 3.91
2932 3174 7.758528 ACTGTACTCAACTAACGAATTATGTCC 59.241 37.037 0.00 0.00 0.00 4.02
2965 3207 9.558396 ACCATTTTATTGTGTCATGTTTTTCAT 57.442 25.926 0.00 0.00 37.22 2.57
2966 3208 8.954950 ACCATTTTATTGTGTCATGTTTTTCA 57.045 26.923 0.00 0.00 0.00 2.69
2975 3217 9.460019 TCAGAATGATACCATTTTATTGTGTCA 57.540 29.630 0.00 0.00 42.56 3.58
3006 3248 2.959516 TCTTAGTGTGAAGCATCCGTG 58.040 47.619 0.00 0.00 0.00 4.94
3007 3249 3.678056 TTCTTAGTGTGAAGCATCCGT 57.322 42.857 0.00 0.00 0.00 4.69
3008 3250 5.755375 ACATATTCTTAGTGTGAAGCATCCG 59.245 40.000 0.00 0.00 0.00 4.18
3009 3251 7.559590 AACATATTCTTAGTGTGAAGCATCC 57.440 36.000 0.00 0.00 0.00 3.51
3010 3252 7.912250 CCAAACATATTCTTAGTGTGAAGCATC 59.088 37.037 0.00 0.00 0.00 3.91
3011 3253 7.394359 ACCAAACATATTCTTAGTGTGAAGCAT 59.606 33.333 0.00 0.00 0.00 3.79
3012 3254 6.714810 ACCAAACATATTCTTAGTGTGAAGCA 59.285 34.615 0.00 0.00 0.00 3.91
3013 3255 7.145932 ACCAAACATATTCTTAGTGTGAAGC 57.854 36.000 0.00 0.00 0.00 3.86
3014 3256 8.391106 GCTACCAAACATATTCTTAGTGTGAAG 58.609 37.037 0.00 0.00 0.00 3.02
3015 3257 7.335924 GGCTACCAAACATATTCTTAGTGTGAA 59.664 37.037 0.00 0.00 0.00 3.18
3016 3258 6.821665 GGCTACCAAACATATTCTTAGTGTGA 59.178 38.462 0.00 0.00 0.00 3.58
3017 3259 6.823689 AGGCTACCAAACATATTCTTAGTGTG 59.176 38.462 0.00 0.00 0.00 3.82
3018 3260 6.958767 AGGCTACCAAACATATTCTTAGTGT 58.041 36.000 0.00 0.00 0.00 3.55
3019 3261 7.985184 TGTAGGCTACCAAACATATTCTTAGTG 59.015 37.037 21.34 0.00 0.00 2.74
3020 3262 8.086143 TGTAGGCTACCAAACATATTCTTAGT 57.914 34.615 21.34 0.00 0.00 2.24
3021 3263 9.209175 GATGTAGGCTACCAAACATATTCTTAG 57.791 37.037 21.34 0.00 34.20 2.18
3022 3264 7.870954 CGATGTAGGCTACCAAACATATTCTTA 59.129 37.037 21.34 0.00 34.20 2.10
3023 3265 6.706270 CGATGTAGGCTACCAAACATATTCTT 59.294 38.462 21.34 0.00 34.20 2.52
3024 3266 6.041637 TCGATGTAGGCTACCAAACATATTCT 59.958 38.462 21.34 0.00 34.20 2.40
3025 3267 6.220930 TCGATGTAGGCTACCAAACATATTC 58.779 40.000 21.34 0.00 34.20 1.75
3026 3268 6.169557 TCGATGTAGGCTACCAAACATATT 57.830 37.500 21.34 0.00 34.20 1.28
3027 3269 5.801531 TCGATGTAGGCTACCAAACATAT 57.198 39.130 21.34 6.66 34.20 1.78
3028 3270 5.801531 ATCGATGTAGGCTACCAAACATA 57.198 39.130 21.34 1.62 34.20 2.29
3029 3271 4.689612 ATCGATGTAGGCTACCAAACAT 57.310 40.909 21.34 10.75 35.88 2.71
3030 3272 4.481368 AATCGATGTAGGCTACCAAACA 57.519 40.909 21.34 5.84 0.00 2.83
3031 3273 5.813080 AAAATCGATGTAGGCTACCAAAC 57.187 39.130 21.34 9.24 0.00 2.93
3032 3274 5.392595 GCAAAAATCGATGTAGGCTACCAAA 60.393 40.000 21.34 3.89 0.00 3.28
3033 3275 4.095782 GCAAAAATCGATGTAGGCTACCAA 59.904 41.667 21.34 4.65 0.00 3.67
3034 3276 3.625764 GCAAAAATCGATGTAGGCTACCA 59.374 43.478 21.34 10.28 0.00 3.25
3035 3277 3.003378 GGCAAAAATCGATGTAGGCTACC 59.997 47.826 21.34 6.54 0.00 3.18
3036 3278 3.003378 GGGCAAAAATCGATGTAGGCTAC 59.997 47.826 17.76 17.76 0.00 3.58
3037 3279 3.118038 AGGGCAAAAATCGATGTAGGCTA 60.118 43.478 0.00 0.00 0.00 3.93
3038 3280 2.024414 GGGCAAAAATCGATGTAGGCT 58.976 47.619 0.00 0.00 0.00 4.58
3039 3281 2.024414 AGGGCAAAAATCGATGTAGGC 58.976 47.619 0.00 2.09 0.00 3.93
3040 3282 3.545703 AGAGGGCAAAAATCGATGTAGG 58.454 45.455 0.00 0.00 0.00 3.18
3041 3283 4.396166 ACAAGAGGGCAAAAATCGATGTAG 59.604 41.667 0.00 0.00 0.00 2.74
3042 3284 4.331968 ACAAGAGGGCAAAAATCGATGTA 58.668 39.130 0.00 0.00 0.00 2.29
3043 3285 3.157087 ACAAGAGGGCAAAAATCGATGT 58.843 40.909 0.00 0.00 0.00 3.06
3044 3286 3.855689 ACAAGAGGGCAAAAATCGATG 57.144 42.857 0.00 0.00 0.00 3.84
3045 3287 6.772716 ACATATACAAGAGGGCAAAAATCGAT 59.227 34.615 0.00 0.00 0.00 3.59
3046 3288 6.038161 CACATATACAAGAGGGCAAAAATCGA 59.962 38.462 0.00 0.00 0.00 3.59
3047 3289 6.038161 TCACATATACAAGAGGGCAAAAATCG 59.962 38.462 0.00 0.00 0.00 3.34
3048 3290 7.067494 AGTCACATATACAAGAGGGCAAAAATC 59.933 37.037 0.00 0.00 0.00 2.17
3049 3291 6.891908 AGTCACATATACAAGAGGGCAAAAAT 59.108 34.615 0.00 0.00 0.00 1.82
3050 3292 6.245408 AGTCACATATACAAGAGGGCAAAAA 58.755 36.000 0.00 0.00 0.00 1.94
3051 3293 5.815581 AGTCACATATACAAGAGGGCAAAA 58.184 37.500 0.00 0.00 0.00 2.44
3052 3294 5.435686 AGTCACATATACAAGAGGGCAAA 57.564 39.130 0.00 0.00 0.00 3.68
3053 3295 6.156256 ACTTAGTCACATATACAAGAGGGCAA 59.844 38.462 0.00 0.00 0.00 4.52
3054 3296 5.661312 ACTTAGTCACATATACAAGAGGGCA 59.339 40.000 0.00 0.00 0.00 5.36
3055 3297 6.163135 ACTTAGTCACATATACAAGAGGGC 57.837 41.667 0.00 0.00 0.00 5.19
3056 3298 6.986817 CCAACTTAGTCACATATACAAGAGGG 59.013 42.308 0.00 0.00 0.00 4.30
3057 3299 6.986817 CCCAACTTAGTCACATATACAAGAGG 59.013 42.308 0.00 0.00 0.00 3.69
3058 3300 6.480320 GCCCAACTTAGTCACATATACAAGAG 59.520 42.308 0.00 0.00 0.00 2.85
3059 3301 6.346096 GCCCAACTTAGTCACATATACAAGA 58.654 40.000 0.00 0.00 0.00 3.02
3060 3302 5.527582 GGCCCAACTTAGTCACATATACAAG 59.472 44.000 0.00 0.00 0.00 3.16
3061 3303 5.190925 AGGCCCAACTTAGTCACATATACAA 59.809 40.000 0.00 0.00 0.00 2.41
3062 3304 4.719773 AGGCCCAACTTAGTCACATATACA 59.280 41.667 0.00 0.00 0.00 2.29
3063 3305 5.057149 CAGGCCCAACTTAGTCACATATAC 58.943 45.833 0.00 0.00 0.00 1.47
3064 3306 4.966168 TCAGGCCCAACTTAGTCACATATA 59.034 41.667 0.00 0.00 0.00 0.86
3065 3307 3.780294 TCAGGCCCAACTTAGTCACATAT 59.220 43.478 0.00 0.00 0.00 1.78
3066 3308 3.055385 GTCAGGCCCAACTTAGTCACATA 60.055 47.826 0.00 0.00 0.00 2.29
3067 3309 1.985159 TCAGGCCCAACTTAGTCACAT 59.015 47.619 0.00 0.00 0.00 3.21
3068 3310 1.071699 GTCAGGCCCAACTTAGTCACA 59.928 52.381 0.00 0.00 0.00 3.58
3069 3311 1.348036 AGTCAGGCCCAACTTAGTCAC 59.652 52.381 0.00 0.00 0.00 3.67
3070 3312 1.347707 CAGTCAGGCCCAACTTAGTCA 59.652 52.381 0.00 0.00 0.00 3.41
3071 3313 1.623811 TCAGTCAGGCCCAACTTAGTC 59.376 52.381 0.00 0.00 0.00 2.59
3072 3314 1.625818 CTCAGTCAGGCCCAACTTAGT 59.374 52.381 0.00 0.00 0.00 2.24
3073 3315 1.625818 ACTCAGTCAGGCCCAACTTAG 59.374 52.381 12.55 12.55 0.00 2.18
3074 3316 1.729586 ACTCAGTCAGGCCCAACTTA 58.270 50.000 0.00 0.00 0.00 2.24
3075 3317 1.729586 TACTCAGTCAGGCCCAACTT 58.270 50.000 0.00 0.00 0.00 2.66
3076 3318 1.729586 TTACTCAGTCAGGCCCAACT 58.270 50.000 0.00 0.00 0.00 3.16
3077 3319 2.561478 TTTACTCAGTCAGGCCCAAC 57.439 50.000 0.00 0.00 0.00 3.77
3078 3320 3.844211 AGTATTTACTCAGTCAGGCCCAA 59.156 43.478 0.00 0.00 0.00 4.12
3079 3321 3.450904 AGTATTTACTCAGTCAGGCCCA 58.549 45.455 0.00 0.00 0.00 5.36
3080 3322 5.609533 TTAGTATTTACTCAGTCAGGCCC 57.390 43.478 0.00 0.00 37.73 5.80
3081 3323 6.037281 GCTTTTAGTATTTACTCAGTCAGGCC 59.963 42.308 0.00 0.00 37.73 5.19
3082 3324 6.819146 AGCTTTTAGTATTTACTCAGTCAGGC 59.181 38.462 0.00 0.00 37.73 4.85
3089 3331 9.378551 CCACACATAGCTTTTAGTATTTACTCA 57.621 33.333 0.00 0.00 37.73 3.41
3090 3332 9.595823 TCCACACATAGCTTTTAGTATTTACTC 57.404 33.333 0.00 0.00 37.73 2.59
3091 3333 9.379791 GTCCACACATAGCTTTTAGTATTTACT 57.620 33.333 0.00 0.00 40.24 2.24
3092 3334 9.158233 TGTCCACACATAGCTTTTAGTATTTAC 57.842 33.333 0.00 0.00 0.00 2.01
3093 3335 9.899661 ATGTCCACACATAGCTTTTAGTATTTA 57.100 29.630 0.00 0.00 41.81 1.40
3094 3336 8.807948 ATGTCCACACATAGCTTTTAGTATTT 57.192 30.769 0.00 0.00 41.81 1.40
3095 3337 9.326413 GTATGTCCACACATAGCTTTTAGTATT 57.674 33.333 0.00 0.00 44.61 1.89
3096 3338 8.482943 TGTATGTCCACACATAGCTTTTAGTAT 58.517 33.333 0.00 0.00 44.61 2.12
3097 3339 7.842982 TGTATGTCCACACATAGCTTTTAGTA 58.157 34.615 0.00 0.00 44.61 1.82
3098 3340 6.707290 TGTATGTCCACACATAGCTTTTAGT 58.293 36.000 0.00 0.00 44.61 2.24
3099 3341 6.818644 ACTGTATGTCCACACATAGCTTTTAG 59.181 38.462 0.00 0.00 44.61 1.85
3100 3342 6.707290 ACTGTATGTCCACACATAGCTTTTA 58.293 36.000 0.00 0.00 44.61 1.52
3101 3343 5.560724 ACTGTATGTCCACACATAGCTTTT 58.439 37.500 0.00 0.00 44.61 2.27
3102 3344 5.165961 ACTGTATGTCCACACATAGCTTT 57.834 39.130 0.00 0.00 44.61 3.51
3103 3345 4.826274 ACTGTATGTCCACACATAGCTT 57.174 40.909 0.00 0.00 44.61 3.74
3104 3346 4.956700 ACTACTGTATGTCCACACATAGCT 59.043 41.667 0.00 0.00 44.61 3.32
3105 3347 5.043903 CACTACTGTATGTCCACACATAGC 58.956 45.833 0.00 0.00 44.61 2.97
3106 3348 5.043903 GCACTACTGTATGTCCACACATAG 58.956 45.833 0.00 0.00 44.61 2.23
3107 3349 4.464597 TGCACTACTGTATGTCCACACATA 59.535 41.667 0.00 0.00 41.81 2.29
3108 3350 3.260632 TGCACTACTGTATGTCCACACAT 59.739 43.478 0.00 0.00 45.73 3.21
3109 3351 2.630580 TGCACTACTGTATGTCCACACA 59.369 45.455 0.00 0.00 36.78 3.72
3110 3352 3.056821 TCTGCACTACTGTATGTCCACAC 60.057 47.826 0.00 0.00 0.00 3.82
3111 3353 3.161866 TCTGCACTACTGTATGTCCACA 58.838 45.455 0.00 0.00 0.00 4.17
3112 3354 3.868757 TCTGCACTACTGTATGTCCAC 57.131 47.619 0.00 0.00 0.00 4.02
3113 3355 3.056107 GGTTCTGCACTACTGTATGTCCA 60.056 47.826 0.00 0.00 0.00 4.02
3114 3356 3.522553 GGTTCTGCACTACTGTATGTCC 58.477 50.000 0.00 0.00 0.00 4.02
3115 3357 3.179830 CGGTTCTGCACTACTGTATGTC 58.820 50.000 0.00 0.00 0.00 3.06
3116 3358 2.094182 CCGGTTCTGCACTACTGTATGT 60.094 50.000 0.00 0.00 0.00 2.29
3117 3359 2.540515 CCGGTTCTGCACTACTGTATG 58.459 52.381 0.00 0.00 0.00 2.39
3118 3360 1.480954 CCCGGTTCTGCACTACTGTAT 59.519 52.381 0.00 0.00 0.00 2.29
3119 3361 0.892755 CCCGGTTCTGCACTACTGTA 59.107 55.000 0.00 0.00 0.00 2.74
3120 3362 0.830444 TCCCGGTTCTGCACTACTGT 60.830 55.000 0.00 0.00 0.00 3.55
3121 3363 0.537188 ATCCCGGTTCTGCACTACTG 59.463 55.000 0.00 0.00 0.00 2.74
3122 3364 1.276622 AATCCCGGTTCTGCACTACT 58.723 50.000 0.00 0.00 0.00 2.57
3123 3365 2.109425 AAATCCCGGTTCTGCACTAC 57.891 50.000 0.00 0.00 0.00 2.73
3124 3366 2.419574 GCTAAATCCCGGTTCTGCACTA 60.420 50.000 0.00 0.00 0.00 2.74
3125 3367 1.679032 GCTAAATCCCGGTTCTGCACT 60.679 52.381 0.00 0.00 0.00 4.40
3126 3368 0.733150 GCTAAATCCCGGTTCTGCAC 59.267 55.000 0.00 0.00 0.00 4.57
3127 3369 0.326595 TGCTAAATCCCGGTTCTGCA 59.673 50.000 0.00 0.00 0.00 4.41
3128 3370 0.733150 GTGCTAAATCCCGGTTCTGC 59.267 55.000 0.00 0.00 0.00 4.26
3129 3371 1.379527 GGTGCTAAATCCCGGTTCTG 58.620 55.000 0.00 0.00 0.00 3.02
3130 3372 0.107848 CGGTGCTAAATCCCGGTTCT 60.108 55.000 0.00 0.00 38.09 3.01
3131 3373 2.390427 CGGTGCTAAATCCCGGTTC 58.610 57.895 0.00 0.00 38.09 3.62
3132 3374 4.629779 CGGTGCTAAATCCCGGTT 57.370 55.556 0.00 0.00 38.09 4.44
3135 3377 1.426041 CGAACCGGTGCTAAATCCCG 61.426 60.000 8.52 0.00 41.37 5.14
3136 3378 0.392060 ACGAACCGGTGCTAAATCCC 60.392 55.000 8.52 0.00 0.00 3.85
3137 3379 2.298411 TACGAACCGGTGCTAAATCC 57.702 50.000 8.52 0.00 0.00 3.01
3138 3380 2.606272 CCTTACGAACCGGTGCTAAATC 59.394 50.000 8.52 0.00 0.00 2.17
3139 3381 2.624636 CCTTACGAACCGGTGCTAAAT 58.375 47.619 8.52 0.00 0.00 1.40
3140 3382 1.940752 GCCTTACGAACCGGTGCTAAA 60.941 52.381 8.52 1.47 0.00 1.85
3141 3383 0.390209 GCCTTACGAACCGGTGCTAA 60.390 55.000 8.52 6.09 0.00 3.09
3142 3384 1.216178 GCCTTACGAACCGGTGCTA 59.784 57.895 8.52 0.00 0.00 3.49
3143 3385 2.047560 GCCTTACGAACCGGTGCT 60.048 61.111 8.52 0.00 0.00 4.40
3144 3386 3.122971 GGCCTTACGAACCGGTGC 61.123 66.667 8.52 4.53 0.00 5.01
3145 3387 2.435410 GGGCCTTACGAACCGGTG 60.435 66.667 8.52 0.00 0.00 4.94
3146 3388 1.771783 AAAGGGCCTTACGAACCGGT 61.772 55.000 21.25 0.00 0.00 5.28
3147 3389 0.249955 TAAAGGGCCTTACGAACCGG 59.750 55.000 21.25 0.00 0.00 5.28
3148 3390 1.066645 ACTAAAGGGCCTTACGAACCG 60.067 52.381 21.25 5.60 0.00 4.44
3149 3391 2.353323 CACTAAAGGGCCTTACGAACC 58.647 52.381 21.25 0.00 0.00 3.62
3150 3392 1.736126 GCACTAAAGGGCCTTACGAAC 59.264 52.381 21.25 5.99 0.00 3.95
3151 3393 1.339342 GGCACTAAAGGGCCTTACGAA 60.339 52.381 21.25 4.81 46.74 3.85
3152 3394 0.251073 GGCACTAAAGGGCCTTACGA 59.749 55.000 21.25 7.25 46.74 3.43
3153 3395 2.776659 GGCACTAAAGGGCCTTACG 58.223 57.895 21.25 15.66 46.74 3.18
3158 3400 2.035155 AACCGGCACTAAAGGGCC 59.965 61.111 13.51 13.51 46.80 5.80
3159 3401 1.302993 TGAACCGGCACTAAAGGGC 60.303 57.895 0.00 0.00 0.00 5.19
3160 3402 1.305930 GCTGAACCGGCACTAAAGGG 61.306 60.000 0.00 0.00 35.55 3.95
3161 3403 0.605319 TGCTGAACCGGCACTAAAGG 60.605 55.000 0.00 0.00 41.16 3.11
3162 3404 1.069227 GTTGCTGAACCGGCACTAAAG 60.069 52.381 0.00 0.00 46.04 1.85
3163 3405 0.948678 GTTGCTGAACCGGCACTAAA 59.051 50.000 0.00 0.00 46.04 1.85
3164 3406 0.887387 GGTTGCTGAACCGGCACTAA 60.887 55.000 0.00 0.00 46.04 2.24
3165 3407 1.302192 GGTTGCTGAACCGGCACTA 60.302 57.895 0.00 0.00 46.04 2.74
3166 3408 2.594592 GGTTGCTGAACCGGCACT 60.595 61.111 0.00 0.00 46.04 4.40
3173 3415 0.948678 TTTAGTGCCGGTTGCTGAAC 59.051 50.000 1.90 0.00 42.00 3.18
3174 3416 1.234821 CTTTAGTGCCGGTTGCTGAA 58.765 50.000 1.90 1.36 42.00 3.02
3175 3417 1.234615 GCTTTAGTGCCGGTTGCTGA 61.235 55.000 1.90 0.00 42.00 4.26
3176 3418 1.210155 GCTTTAGTGCCGGTTGCTG 59.790 57.895 1.90 0.00 42.00 4.41
3177 3419 1.971695 GGCTTTAGTGCCGGTTGCT 60.972 57.895 1.90 1.18 43.74 3.91
3178 3420 2.566529 GGCTTTAGTGCCGGTTGC 59.433 61.111 1.90 0.00 43.74 4.17
3202 3444 4.084147 TCCGGTACAGGGGGAGGG 62.084 72.222 12.41 0.00 0.00 4.30
3203 3445 2.762875 GTCCGGTACAGGGGGAGG 60.763 72.222 12.41 0.00 0.00 4.30
3204 3446 2.762875 GGTCCGGTACAGGGGGAG 60.763 72.222 12.41 0.00 0.00 4.30
3205 3447 4.764771 CGGTCCGGTACAGGGGGA 62.765 72.222 12.41 1.26 0.00 4.81
3209 3451 4.446413 GTGGCGGTCCGGTACAGG 62.446 72.222 14.38 5.57 34.14 4.00
3210 3452 1.597797 TTAGTGGCGGTCCGGTACAG 61.598 60.000 14.38 0.25 34.14 2.74
3211 3453 1.184322 TTTAGTGGCGGTCCGGTACA 61.184 55.000 14.38 0.00 34.14 2.90
3212 3454 0.459063 CTTTAGTGGCGGTCCGGTAC 60.459 60.000 14.38 0.00 34.14 3.34
3213 3455 1.606885 CCTTTAGTGGCGGTCCGGTA 61.607 60.000 14.38 0.00 34.14 4.02
3214 3456 2.660802 CTTTAGTGGCGGTCCGGT 59.339 61.111 14.38 0.00 34.14 5.28
3215 3457 2.125269 CCTTTAGTGGCGGTCCGG 60.125 66.667 14.38 0.00 34.14 5.14
3216 3458 2.125269 CCCTTTAGTGGCGGTCCG 60.125 66.667 6.99 6.99 34.14 4.79
3217 3459 2.437895 GCCCTTTAGTGGCGGTCC 60.438 66.667 0.00 0.00 39.48 4.46
3223 3465 1.674322 CGTGGTGGCCCTTTAGTGG 60.674 63.158 0.00 0.00 0.00 4.00
3224 3466 1.072505 ACGTGGTGGCCCTTTAGTG 59.927 57.895 0.00 0.00 0.00 2.74
3225 3467 1.072505 CACGTGGTGGCCCTTTAGT 59.927 57.895 7.95 0.00 0.00 2.24
3226 3468 3.981308 CACGTGGTGGCCCTTTAG 58.019 61.111 7.95 0.00 0.00 1.85
3259 3501 1.759459 CTAATGGTCTCCCCGCCCTC 61.759 65.000 0.00 0.00 35.15 4.30
3260 3502 1.766461 CTAATGGTCTCCCCGCCCT 60.766 63.158 0.00 0.00 35.15 5.19
3261 3503 0.761702 TACTAATGGTCTCCCCGCCC 60.762 60.000 0.00 0.00 35.15 6.13
3262 3504 0.391966 GTACTAATGGTCTCCCCGCC 59.608 60.000 0.00 0.00 35.15 6.13
3263 3505 0.391966 GGTACTAATGGTCTCCCCGC 59.608 60.000 0.00 0.00 35.15 6.13
3264 3506 0.672342 CGGTACTAATGGTCTCCCCG 59.328 60.000 0.00 0.00 35.15 5.73
3265 3507 1.046204 CCGGTACTAATGGTCTCCCC 58.954 60.000 0.00 0.00 0.00 4.81
3266 3508 1.785647 ACCGGTACTAATGGTCTCCC 58.214 55.000 4.49 0.00 0.00 4.30
3267 3509 2.159000 CCAACCGGTACTAATGGTCTCC 60.159 54.545 8.00 0.00 34.11 3.71
3268 3510 2.498885 ACCAACCGGTACTAATGGTCTC 59.501 50.000 20.02 0.00 46.71 3.36
3269 3511 2.543635 ACCAACCGGTACTAATGGTCT 58.456 47.619 20.02 1.19 46.71 3.85
3287 3529 6.938596 ACCTTTTAGTATCAGTTGGTGTTACC 59.061 38.462 0.00 0.00 39.22 2.85
3288 3530 7.974482 ACCTTTTAGTATCAGTTGGTGTTAC 57.026 36.000 0.00 0.00 33.18 2.50
3289 3531 8.983702 AAACCTTTTAGTATCAGTTGGTGTTA 57.016 30.769 0.00 0.00 0.00 2.41
3290 3532 7.891498 AAACCTTTTAGTATCAGTTGGTGTT 57.109 32.000 0.00 0.00 0.00 3.32
3291 3533 7.664318 CCTAAACCTTTTAGTATCAGTTGGTGT 59.336 37.037 5.25 0.00 0.00 4.16
3292 3534 7.120726 CCCTAAACCTTTTAGTATCAGTTGGTG 59.879 40.741 5.25 0.00 0.00 4.17
3293 3535 7.173032 CCCTAAACCTTTTAGTATCAGTTGGT 58.827 38.462 5.25 0.00 0.00 3.67
3294 3536 6.602009 CCCCTAAACCTTTTAGTATCAGTTGG 59.398 42.308 5.25 0.00 0.00 3.77
3295 3537 7.173032 ACCCCTAAACCTTTTAGTATCAGTTG 58.827 38.462 5.25 0.00 0.00 3.16
3296 3538 7.339177 ACCCCTAAACCTTTTAGTATCAGTT 57.661 36.000 5.25 0.00 0.00 3.16
3297 3539 6.964876 ACCCCTAAACCTTTTAGTATCAGT 57.035 37.500 5.25 0.00 0.00 3.41
3298 3540 8.520351 CAAAACCCCTAAACCTTTTAGTATCAG 58.480 37.037 5.25 0.00 0.00 2.90
3299 3541 7.452189 CCAAAACCCCTAAACCTTTTAGTATCA 59.548 37.037 5.25 0.00 0.00 2.15
3300 3542 7.452501 ACCAAAACCCCTAAACCTTTTAGTATC 59.547 37.037 5.25 0.00 0.00 2.24
3301 3543 7.307550 ACCAAAACCCCTAAACCTTTTAGTAT 58.692 34.615 5.25 0.00 0.00 2.12
3302 3544 6.681538 ACCAAAACCCCTAAACCTTTTAGTA 58.318 36.000 5.25 0.00 0.00 1.82
3303 3545 5.531198 ACCAAAACCCCTAAACCTTTTAGT 58.469 37.500 5.25 0.00 0.00 2.24
3304 3546 6.488769 AACCAAAACCCCTAAACCTTTTAG 57.511 37.500 0.00 0.00 0.00 1.85
3305 3547 6.887886 AAACCAAAACCCCTAAACCTTTTA 57.112 33.333 0.00 0.00 0.00 1.52
3306 3548 5.782677 AAACCAAAACCCCTAAACCTTTT 57.217 34.783 0.00 0.00 0.00 2.27
3307 3549 5.782677 AAAACCAAAACCCCTAAACCTTT 57.217 34.783 0.00 0.00 0.00 3.11
3308 3550 7.454553 AATAAAACCAAAACCCCTAAACCTT 57.545 32.000 0.00 0.00 0.00 3.50
3309 3551 8.745149 ATAATAAAACCAAAACCCCTAAACCT 57.255 30.769 0.00 0.00 0.00 3.50
3310 3552 9.796180 AAATAATAAAACCAAAACCCCTAAACC 57.204 29.630 0.00 0.00 0.00 3.27
3375 3617 9.438228 TGAGTATCGTAAAATACCAACAAATGA 57.562 29.630 0.00 0.00 38.61 2.57
3387 3629 9.740239 ACGTGTACAATATGAGTATCGTAAAAT 57.260 29.630 0.00 0.00 40.51 1.82
3388 3630 9.571810 AACGTGTACAATATGAGTATCGTAAAA 57.428 29.630 0.00 0.00 40.51 1.52
3391 3633 9.815936 CATAACGTGTACAATATGAGTATCGTA 57.184 33.333 14.78 1.67 41.53 3.43
3392 3634 7.325338 GCATAACGTGTACAATATGAGTATCGT 59.675 37.037 20.43 10.51 38.61 3.73
3393 3635 7.325097 TGCATAACGTGTACAATATGAGTATCG 59.675 37.037 20.43 9.99 38.61 2.92
3394 3636 8.515473 TGCATAACGTGTACAATATGAGTATC 57.485 34.615 20.43 8.97 0.00 2.24
3405 3647 9.968870 TCTGTTTATATATGCATAACGTGTACA 57.031 29.630 11.13 9.90 0.00 2.90
3421 3663 9.245962 CGGTTCTACGAGAAATTCTGTTTATAT 57.754 33.333 0.00 0.00 35.75 0.86
3422 3664 8.461222 TCGGTTCTACGAGAAATTCTGTTTATA 58.539 33.333 0.00 0.00 35.75 0.98
3423 3665 7.318141 TCGGTTCTACGAGAAATTCTGTTTAT 58.682 34.615 0.00 0.00 35.75 1.40
3424 3666 6.680810 TCGGTTCTACGAGAAATTCTGTTTA 58.319 36.000 0.00 0.00 35.75 2.01
3425 3667 5.535333 TCGGTTCTACGAGAAATTCTGTTT 58.465 37.500 0.00 0.00 35.75 2.83
3426 3668 5.130292 TCGGTTCTACGAGAAATTCTGTT 57.870 39.130 0.00 0.00 35.75 3.16
3427 3669 4.778534 TCGGTTCTACGAGAAATTCTGT 57.221 40.909 0.00 1.94 35.75 3.41
3461 3703 9.750125 GGTGCGAGACATTTGATGATATATATA 57.250 33.333 0.00 0.00 0.00 0.86
3462 3704 8.260114 TGGTGCGAGACATTTGATGATATATAT 58.740 33.333 0.00 0.00 0.00 0.86
3463 3705 7.545615 GTGGTGCGAGACATTTGATGATATATA 59.454 37.037 0.00 0.00 0.00 0.86
3464 3706 6.369890 GTGGTGCGAGACATTTGATGATATAT 59.630 38.462 0.00 0.00 0.00 0.86
3465 3707 5.696270 GTGGTGCGAGACATTTGATGATATA 59.304 40.000 0.00 0.00 0.00 0.86
3466 3708 4.512944 GTGGTGCGAGACATTTGATGATAT 59.487 41.667 0.00 0.00 0.00 1.63
3467 3709 3.871006 GTGGTGCGAGACATTTGATGATA 59.129 43.478 0.00 0.00 0.00 2.15
3468 3710 2.679837 GTGGTGCGAGACATTTGATGAT 59.320 45.455 0.00 0.00 0.00 2.45
3469 3711 2.076100 GTGGTGCGAGACATTTGATGA 58.924 47.619 0.00 0.00 0.00 2.92
3470 3712 1.131126 GGTGGTGCGAGACATTTGATG 59.869 52.381 0.00 0.00 0.00 3.07
3471 3713 1.271325 TGGTGGTGCGAGACATTTGAT 60.271 47.619 0.00 0.00 0.00 2.57
3472 3714 0.107643 TGGTGGTGCGAGACATTTGA 59.892 50.000 0.00 0.00 0.00 2.69
3473 3715 1.167851 ATGGTGGTGCGAGACATTTG 58.832 50.000 0.00 0.00 0.00 2.32
3474 3716 1.812571 GAATGGTGGTGCGAGACATTT 59.187 47.619 0.00 0.00 32.42 2.32
3475 3717 1.271325 TGAATGGTGGTGCGAGACATT 60.271 47.619 0.00 0.00 34.73 2.71
3476 3718 0.324614 TGAATGGTGGTGCGAGACAT 59.675 50.000 0.00 0.00 0.00 3.06
3477 3719 0.602638 GTGAATGGTGGTGCGAGACA 60.603 55.000 0.00 0.00 0.00 3.41
3478 3720 0.602638 TGTGAATGGTGGTGCGAGAC 60.603 55.000 0.00 0.00 0.00 3.36
3479 3721 0.602638 GTGTGAATGGTGGTGCGAGA 60.603 55.000 0.00 0.00 0.00 4.04
3480 3722 0.884259 TGTGTGAATGGTGGTGCGAG 60.884 55.000 0.00 0.00 0.00 5.03
3481 3723 0.250684 ATGTGTGAATGGTGGTGCGA 60.251 50.000 0.00 0.00 0.00 5.10
3482 3724 1.130373 GTATGTGTGAATGGTGGTGCG 59.870 52.381 0.00 0.00 0.00 5.34
3483 3725 2.095263 GTGTATGTGTGAATGGTGGTGC 60.095 50.000 0.00 0.00 0.00 5.01
3484 3726 3.058293 GTGTGTATGTGTGAATGGTGGTG 60.058 47.826 0.00 0.00 0.00 4.17
3485 3727 3.146066 GTGTGTATGTGTGAATGGTGGT 58.854 45.455 0.00 0.00 0.00 4.16
3486 3728 3.145286 TGTGTGTATGTGTGAATGGTGG 58.855 45.455 0.00 0.00 0.00 4.61
3487 3729 4.216042 ACATGTGTGTATGTGTGAATGGTG 59.784 41.667 0.00 0.00 39.68 4.17
3488 3730 4.397420 ACATGTGTGTATGTGTGAATGGT 58.603 39.130 0.00 0.00 39.68 3.55
3489 3731 5.643348 AGTACATGTGTGTATGTGTGAATGG 59.357 40.000 9.11 0.00 42.43 3.16
3490 3732 6.726258 AGTACATGTGTGTATGTGTGAATG 57.274 37.500 9.11 0.00 42.43 2.67
3529 3771 9.158233 CGGTTCTTTCACCTAGTGATTTAATAA 57.842 33.333 0.00 0.00 42.40 1.40
3530 3772 7.279313 GCGGTTCTTTCACCTAGTGATTTAATA 59.721 37.037 0.00 0.00 42.40 0.98
3531 3773 6.093633 GCGGTTCTTTCACCTAGTGATTTAAT 59.906 38.462 0.00 0.00 42.40 1.40
3532 3774 5.410439 GCGGTTCTTTCACCTAGTGATTTAA 59.590 40.000 0.00 0.00 42.40 1.52
3533 3775 4.933400 GCGGTTCTTTCACCTAGTGATTTA 59.067 41.667 0.00 0.00 42.40 1.40
3534 3776 3.751698 GCGGTTCTTTCACCTAGTGATTT 59.248 43.478 0.00 0.00 42.40 2.17
3535 3777 3.335579 GCGGTTCTTTCACCTAGTGATT 58.664 45.455 0.00 0.00 42.40 2.57
3536 3778 2.674177 CGCGGTTCTTTCACCTAGTGAT 60.674 50.000 0.00 0.00 42.40 3.06
3537 3779 1.336517 CGCGGTTCTTTCACCTAGTGA 60.337 52.381 0.00 0.00 41.09 3.41
3538 3780 1.068474 CGCGGTTCTTTCACCTAGTG 58.932 55.000 0.00 0.00 34.22 2.74
3539 3781 0.037605 CCGCGGTTCTTTCACCTAGT 60.038 55.000 19.50 0.00 34.22 2.57
3540 3782 0.245539 TCCGCGGTTCTTTCACCTAG 59.754 55.000 27.15 0.00 34.22 3.02
3541 3783 0.899720 ATCCGCGGTTCTTTCACCTA 59.100 50.000 27.15 0.03 34.22 3.08
3542 3784 0.036306 AATCCGCGGTTCTTTCACCT 59.964 50.000 27.15 0.00 34.22 4.00
3543 3785 1.664151 CTAATCCGCGGTTCTTTCACC 59.336 52.381 27.15 0.00 0.00 4.02
3544 3786 2.344025 ACTAATCCGCGGTTCTTTCAC 58.656 47.619 27.15 0.00 0.00 3.18
3545 3787 2.754946 ACTAATCCGCGGTTCTTTCA 57.245 45.000 27.15 3.40 0.00 2.69
3546 3788 3.434299 TGAAACTAATCCGCGGTTCTTTC 59.566 43.478 27.15 23.04 0.00 2.62
3547 3789 3.404899 TGAAACTAATCCGCGGTTCTTT 58.595 40.909 27.15 17.25 0.00 2.52
3548 3790 3.048337 TGAAACTAATCCGCGGTTCTT 57.952 42.857 27.15 18.80 0.00 2.52
3549 3791 2.754946 TGAAACTAATCCGCGGTTCT 57.245 45.000 27.15 13.20 0.00 3.01
3550 3792 2.740447 ACTTGAAACTAATCCGCGGTTC 59.260 45.455 27.15 20.07 0.00 3.62
3551 3793 2.774687 ACTTGAAACTAATCCGCGGTT 58.225 42.857 27.15 20.25 0.00 4.44
3552 3794 2.467566 ACTTGAAACTAATCCGCGGT 57.532 45.000 27.15 9.68 0.00 5.68
3553 3795 3.777478 TCTACTTGAAACTAATCCGCGG 58.223 45.455 22.12 22.12 0.00 6.46
3554 3796 4.209288 CCATCTACTTGAAACTAATCCGCG 59.791 45.833 0.00 0.00 0.00 6.46
3555 3797 5.357257 TCCATCTACTTGAAACTAATCCGC 58.643 41.667 0.00 0.00 0.00 5.54
3556 3798 6.647067 GGATCCATCTACTTGAAACTAATCCG 59.353 42.308 6.95 0.00 0.00 4.18
3557 3799 7.740805 AGGATCCATCTACTTGAAACTAATCC 58.259 38.462 15.82 0.00 0.00 3.01
3560 3802 9.268282 ACTTAGGATCCATCTACTTGAAACTAA 57.732 33.333 15.82 0.00 0.00 2.24
3561 3803 8.696374 CACTTAGGATCCATCTACTTGAAACTA 58.304 37.037 15.82 0.00 0.00 2.24
3562 3804 7.400339 TCACTTAGGATCCATCTACTTGAAACT 59.600 37.037 15.82 0.00 0.00 2.66
3563 3805 7.556844 TCACTTAGGATCCATCTACTTGAAAC 58.443 38.462 15.82 0.00 0.00 2.78
3564 3806 7.733773 TCACTTAGGATCCATCTACTTGAAA 57.266 36.000 15.82 0.00 0.00 2.69
3565 3807 7.565029 TGATCACTTAGGATCCATCTACTTGAA 59.435 37.037 15.82 0.00 42.41 2.69
3566 3808 7.069344 TGATCACTTAGGATCCATCTACTTGA 58.931 38.462 15.82 7.14 42.41 3.02
3567 3809 7.295322 TGATCACTTAGGATCCATCTACTTG 57.705 40.000 15.82 1.58 42.41 3.16
3568 3810 7.566879 ACTTGATCACTTAGGATCCATCTACTT 59.433 37.037 15.82 0.00 42.41 2.24
3569 3811 7.072562 ACTTGATCACTTAGGATCCATCTACT 58.927 38.462 15.82 0.00 42.41 2.57
3570 3812 7.296628 ACTTGATCACTTAGGATCCATCTAC 57.703 40.000 15.82 0.00 42.41 2.59
3571 3813 9.607333 ATTACTTGATCACTTAGGATCCATCTA 57.393 33.333 15.82 3.19 42.41 1.98
3572 3814 7.921041 TTACTTGATCACTTAGGATCCATCT 57.079 36.000 15.82 0.00 42.41 2.90
3573 3815 8.370940 TCATTACTTGATCACTTAGGATCCATC 58.629 37.037 15.82 7.52 42.41 3.51
3574 3816 8.267620 TCATTACTTGATCACTTAGGATCCAT 57.732 34.615 15.82 1.47 42.41 3.41
3575 3817 7.675161 TCATTACTTGATCACTTAGGATCCA 57.325 36.000 15.82 0.00 42.41 3.41
3576 3818 9.566432 AATTCATTACTTGATCACTTAGGATCC 57.434 33.333 2.48 2.48 42.41 3.36
3603 3845 9.857656 AGTGATCAACTCATGGATTATTACAAT 57.142 29.630 0.00 0.00 35.97 2.71
3604 3846 9.685276 AAGTGATCAACTCATGGATTATTACAA 57.315 29.630 0.00 0.00 38.56 2.41
3608 3850 8.717717 TCCTAAGTGATCAACTCATGGATTATT 58.282 33.333 0.00 0.00 38.56 1.40
3609 3851 8.267620 TCCTAAGTGATCAACTCATGGATTAT 57.732 34.615 0.00 0.00 38.56 1.28
3610 3852 7.675161 TCCTAAGTGATCAACTCATGGATTA 57.325 36.000 0.00 0.00 38.56 1.75
3611 3853 6.566079 TCCTAAGTGATCAACTCATGGATT 57.434 37.500 0.00 0.00 38.56 3.01
3612 3854 6.239829 GGATCCTAAGTGATCAACTCATGGAT 60.240 42.308 3.84 6.46 42.41 3.41
3613 3855 5.070981 GGATCCTAAGTGATCAACTCATGGA 59.929 44.000 3.84 1.45 42.41 3.41
3614 3856 5.163269 TGGATCCTAAGTGATCAACTCATGG 60.163 44.000 14.23 0.00 42.41 3.66
3615 3857 5.922053 TGGATCCTAAGTGATCAACTCATG 58.078 41.667 14.23 0.00 42.41 3.07
3616 3858 6.239829 GGATGGATCCTAAGTGATCAACTCAT 60.240 42.308 14.23 0.00 42.41 2.90
3617 3859 5.070981 GGATGGATCCTAAGTGATCAACTCA 59.929 44.000 14.23 0.00 42.41 3.41
3618 3860 5.546526 GGATGGATCCTAAGTGATCAACTC 58.453 45.833 14.23 0.00 42.41 3.01
3619 3861 5.559148 GGATGGATCCTAAGTGATCAACT 57.441 43.478 14.23 0.00 42.41 3.16
3633 3875 5.237344 CGGATTAGTTTCAAGTGGATGGATC 59.763 44.000 0.00 0.00 0.00 3.36
3634 3876 5.126067 CGGATTAGTTTCAAGTGGATGGAT 58.874 41.667 0.00 0.00 0.00 3.41
3635 3877 4.513442 CGGATTAGTTTCAAGTGGATGGA 58.487 43.478 0.00 0.00 0.00 3.41
3636 3878 3.065371 GCGGATTAGTTTCAAGTGGATGG 59.935 47.826 0.00 0.00 0.00 3.51
3637 3879 3.689161 TGCGGATTAGTTTCAAGTGGATG 59.311 43.478 0.00 0.00 0.00 3.51
3638 3880 3.941483 CTGCGGATTAGTTTCAAGTGGAT 59.059 43.478 0.00 0.00 0.00 3.41
3639 3881 3.244422 ACTGCGGATTAGTTTCAAGTGGA 60.244 43.478 0.00 0.00 0.00 4.02
3640 3882 3.074412 ACTGCGGATTAGTTTCAAGTGG 58.926 45.455 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.