Multiple sequence alignment - TraesCS1B01G296300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G296300 chr1B 100.000 2552 0 0 1 2552 514819196 514816645 0.000000e+00 4713.0
1 TraesCS1B01G296300 chr1B 89.674 368 29 5 1 363 345338052 345337689 6.430000e-126 460.0
2 TraesCS1B01G296300 chr1D 91.440 1542 86 28 552 2065 383760928 383759405 0.000000e+00 2074.0
3 TraesCS1B01G296300 chr1D 91.599 369 24 5 1 363 267731278 267731645 1.050000e-138 503.0
4 TraesCS1B01G296300 chr1D 97.143 35 1 0 2057 2091 415983024 415983058 2.740000e-05 60.2
5 TraesCS1B01G296300 chr1A 91.154 1560 83 30 537 2057 483679660 483678117 0.000000e+00 2065.0
6 TraesCS1B01G296300 chr1A 88.981 363 32 6 1 358 14148860 14149219 2.330000e-120 442.0
7 TraesCS1B01G296300 chr6A 87.027 555 46 10 1 533 613041522 613042072 1.010000e-168 603.0
8 TraesCS1B01G296300 chr6A 85.000 280 18 1 2130 2409 99791021 99791276 1.950000e-66 263.0
9 TraesCS1B01G296300 chr2B 86.201 558 51 4 1 536 29131164 29130611 4.730000e-162 580.0
10 TraesCS1B01G296300 chr2B 84.806 283 19 8 2130 2412 474442759 474442501 1.950000e-66 263.0
11 TraesCS1B01G296300 chr2B 84.752 282 19 1 2131 2412 717927172 717926915 7.000000e-66 261.0
12 TraesCS1B01G296300 chr2B 97.297 37 1 0 2055 2091 613230630 613230666 2.120000e-06 63.9
13 TraesCS1B01G296300 chr4B 85.315 572 48 18 1 548 82414605 82414046 2.220000e-155 558.0
14 TraesCS1B01G296300 chr4B 86.667 285 14 1 2128 2412 657246941 657247201 6.900000e-76 294.0
15 TraesCS1B01G296300 chr4B 94.857 175 9 0 2130 2304 653275980 653276154 9.000000e-70 274.0
16 TraesCS1B01G296300 chr4B 94.413 179 9 1 2127 2304 653277117 653276939 9.000000e-70 274.0
17 TraesCS1B01G296300 chr4B 83.607 183 26 3 1289 1469 41744016 41744196 4.370000e-38 169.0
18 TraesCS1B01G296300 chr4B 94.495 109 6 0 2420 2528 522399426 522399534 4.370000e-38 169.0
19 TraesCS1B01G296300 chr4B 97.222 36 0 1 2057 2091 403261272 403261237 2.740000e-05 60.2
20 TraesCS1B01G296300 chr2D 90.566 371 23 8 1 363 109552844 109553210 4.940000e-132 481.0
21 TraesCS1B01G296300 chr2D 80.122 327 36 10 237 540 53583478 53583158 1.540000e-52 217.0
22 TraesCS1B01G296300 chr3B 90.634 363 30 4 1 362 6971152 6970793 1.780000e-131 479.0
23 TraesCS1B01G296300 chr3B 80.580 345 36 6 191 514 822837892 822837558 1.180000e-58 237.0
24 TraesCS1B01G296300 chr3B 94.872 39 2 0 2053 2091 62307397 62307435 7.620000e-06 62.1
25 TraesCS1B01G296300 chr3B 97.143 35 1 0 2060 2094 795696633 795696599 2.740000e-05 60.2
26 TraesCS1B01G296300 chr7D 90.027 371 31 6 1 369 620148548 620148182 2.300000e-130 475.0
27 TraesCS1B01G296300 chr7D 87.037 216 18 8 1003 1218 548697182 548697387 4.240000e-58 235.0
28 TraesCS1B01G296300 chr7D 86.385 213 26 3 1284 1495 617735496 617735286 1.970000e-56 230.0
29 TraesCS1B01G296300 chr7D 86.175 217 20 8 1003 1219 548709087 548709293 2.550000e-55 226.0
30 TraesCS1B01G296300 chr7D 79.602 201 34 6 1273 1469 598485368 598485171 1.230000e-28 137.0
31 TraesCS1B01G296300 chr7D 100.000 32 0 0 2060 2091 272057862 272057893 2.740000e-05 60.2
32 TraesCS1B01G296300 chr6B 83.152 368 37 2 191 537 603373641 603374004 1.910000e-81 313.0
33 TraesCS1B01G296300 chr4A 86.572 283 14 6 2130 2412 669395877 669396135 8.930000e-75 291.0
34 TraesCS1B01G296300 chr4A 84.321 287 21 1 2126 2412 666122571 666122309 2.520000e-65 259.0
35 TraesCS1B01G296300 chr4A 87.678 211 17 6 1012 1222 112847015 112846814 1.180000e-58 237.0
36 TraesCS1B01G296300 chr4A 87.500 208 17 6 1012 1219 112853364 112853166 5.490000e-57 231.0
37 TraesCS1B01G296300 chr4A 88.679 106 8 1 2420 2521 38826374 38826269 2.670000e-25 126.0
38 TraesCS1B01G296300 chr4A 97.222 36 1 0 2058 2093 684965790 684965825 7.620000e-06 62.1
39 TraesCS1B01G296300 chr4A 92.500 40 3 0 2057 2096 676161396 676161435 9.860000e-05 58.4
40 TraesCS1B01G296300 chr7B 82.143 364 40 3 191 533 576677467 576677826 3.210000e-74 289.0
41 TraesCS1B01G296300 chr7B 86.636 217 19 8 1003 1219 591949546 591949752 5.490000e-57 231.0
42 TraesCS1B01G296300 chr7B 86.175 217 20 8 1003 1219 591713473 591713679 2.550000e-55 226.0
43 TraesCS1B01G296300 chr7B 85.185 216 29 3 1284 1498 711755858 711755645 4.270000e-53 219.0
44 TraesCS1B01G296300 chr7B 78.571 168 29 4 367 532 34119612 34119450 1.250000e-18 104.0
45 TraesCS1B01G296300 chr5B 86.268 284 15 2 2129 2412 244519581 244519840 1.160000e-73 287.0
46 TraesCS1B01G296300 chr5B 93.143 175 12 0 2130 2304 659983196 659983022 9.060000e-65 257.0
47 TraesCS1B01G296300 chr5B 94.737 38 2 0 2057 2094 637256083 637256046 2.740000e-05 60.2
48 TraesCS1B01G296300 chrUn 85.765 281 15 2 2126 2406 16479919 16479664 9.000000e-70 274.0
49 TraesCS1B01G296300 chrUn 85.053 281 17 8 2126 2406 326493751 326493496 1.950000e-66 263.0
50 TraesCS1B01G296300 chr7A 77.778 414 70 21 1073 1469 690930210 690929802 4.240000e-58 235.0
51 TraesCS1B01G296300 chr7A 77.536 414 71 21 1073 1469 690918440 690918032 1.970000e-56 230.0
52 TraesCS1B01G296300 chr7A 88.830 188 18 3 1284 1470 711583413 711583228 7.100000e-56 228.0
53 TraesCS1B01G296300 chr7A 85.909 220 21 8 1003 1222 632581699 632581490 2.550000e-55 226.0
54 TraesCS1B01G296300 chr7A 86.127 173 24 0 1290 1462 100064019 100064191 1.210000e-43 187.0
55 TraesCS1B01G296300 chr7A 83.333 180 26 2 367 546 681961233 681961408 2.030000e-36 163.0
56 TraesCS1B01G296300 chr3A 80.781 333 35 8 237 546 700752173 700751847 1.530000e-57 233.0
57 TraesCS1B01G296300 chr3A 80.000 330 37 10 237 542 711411596 711411920 1.540000e-52 217.0
58 TraesCS1B01G296300 chr5D 82.332 283 26 10 2130 2412 118455243 118454985 9.190000e-55 224.0
59 TraesCS1B01G296300 chr5A 87.500 176 22 0 1290 1465 644310689 644310864 1.200000e-48 204.0
60 TraesCS1B01G296300 chr4D 84.153 183 25 3 1289 1469 29177024 29177204 9.390000e-40 174.0
61 TraesCS1B01G296300 chr4D 92.035 113 6 1 2419 2528 426545071 426545183 3.400000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G296300 chr1B 514816645 514819196 2551 True 4713 4713 100.000 1 2552 1 chr1B.!!$R2 2551
1 TraesCS1B01G296300 chr1D 383759405 383760928 1523 True 2074 2074 91.440 552 2065 1 chr1D.!!$R1 1513
2 TraesCS1B01G296300 chr1A 483678117 483679660 1543 True 2065 2065 91.154 537 2057 1 chr1A.!!$R1 1520
3 TraesCS1B01G296300 chr6A 613041522 613042072 550 False 603 603 87.027 1 533 1 chr6A.!!$F2 532
4 TraesCS1B01G296300 chr2B 29130611 29131164 553 True 580 580 86.201 1 536 1 chr2B.!!$R1 535
5 TraesCS1B01G296300 chr4B 82414046 82414605 559 True 558 558 85.315 1 548 1 chr4B.!!$R1 547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
448 474 0.100682 GTGCGCCAGAAGTAGATCGA 59.899 55.0 4.18 0.0 0.0 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2299 2375 0.101759 GGCGTTCGTATGTGGAGCTA 59.898 55.0 0.0 0.0 0.0 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 83 7.521529 CAGAAAATTAGAAGCGTGAAAGATGA 58.478 34.615 0.00 0.00 0.00 2.92
156 159 5.493133 TGTTGTTGCAGAAAATTAGACGT 57.507 34.783 0.00 0.00 0.00 4.34
189 193 8.203485 AGATGTTGTTTGCAATTTTTCTAAGGA 58.797 29.630 0.00 0.00 36.92 3.36
205 209 7.765695 TTCTAAGGATCTTGTTGCAGAAAAT 57.234 32.000 0.00 0.00 0.00 1.82
241 246 6.804677 AGATTTTGCAACATGTGTCTTGTTA 58.195 32.000 2.08 0.00 35.61 2.41
267 272 9.136323 ACAGAAAATTGTAGAAGATGAGGTTTT 57.864 29.630 0.00 0.00 0.00 2.43
332 337 1.599071 CAACAAGAGCTTCGTTGCAGA 59.401 47.619 9.89 0.00 34.21 4.26
385 411 0.384725 CGCTTGTTTCTGCAACTCGG 60.385 55.000 0.00 0.00 36.21 4.63
409 435 4.173256 CGTTGTTTCAGGAATTAATGGGC 58.827 43.478 0.00 0.00 0.00 5.36
422 448 0.695803 AATGGGCCGAGGAAGGAGAT 60.696 55.000 0.00 0.00 0.00 2.75
426 452 0.761802 GGCCGAGGAAGGAGATCAAT 59.238 55.000 0.00 0.00 0.00 2.57
448 474 0.100682 GTGCGCCAGAAGTAGATCGA 59.899 55.000 4.18 0.00 0.00 3.59
470 496 3.178592 CTGTGCGCGCGTACATCA 61.179 61.111 44.47 27.58 39.77 3.07
473 499 1.857426 GTGCGCGCGTACATCAAAC 60.857 57.895 39.47 17.73 0.00 2.93
479 505 0.704008 CGCGTACATCAAACGAACGA 59.296 50.000 0.00 0.00 42.90 3.85
489 515 2.737932 AAACGAACGACCGTCGAGGG 62.738 60.000 27.03 22.23 43.74 4.30
508 534 1.164041 GGGCGGATGTTTCATACGGG 61.164 60.000 14.72 0.00 0.00 5.28
548 574 7.959651 GCATAGCGTCTTCCATTTTATTATCAG 59.040 37.037 0.00 0.00 0.00 2.90
549 575 9.208022 CATAGCGTCTTCCATTTTATTATCAGA 57.792 33.333 0.00 0.00 0.00 3.27
550 576 9.778741 ATAGCGTCTTCCATTTTATTATCAGAA 57.221 29.630 0.00 0.00 0.00 3.02
551 577 8.682936 AGCGTCTTCCATTTTATTATCAGAAT 57.317 30.769 0.00 0.00 0.00 2.40
636 662 4.722700 CCCGACCACTGGGCTTGG 62.723 72.222 0.00 0.00 40.47 3.61
654 680 2.260434 GGCTCGGTTCGTGCTGTA 59.740 61.111 12.76 0.00 44.17 2.74
659 685 2.663196 GGTTCGTGCTGTAGGGCT 59.337 61.111 0.00 0.00 0.00 5.19
677 703 1.000731 GCTGGGCTGCTCATACTAGAG 59.999 57.143 1.02 0.00 38.68 2.43
699 725 0.387565 AAACCACAACAATCCACCGC 59.612 50.000 0.00 0.00 0.00 5.68
703 729 0.442310 CACAACAATCCACCGCTACG 59.558 55.000 0.00 0.00 0.00 3.51
728 754 1.084370 GCTCTCGTCCGATTGGTTGG 61.084 60.000 0.00 0.00 36.30 3.77
732 758 0.245539 TCGTCCGATTGGTTGGTCTC 59.754 55.000 0.00 0.00 36.30 3.36
736 762 0.392998 CCGATTGGTTGGTCTCCCTG 60.393 60.000 0.00 0.00 0.00 4.45
753 779 1.354337 CTGTCACACGGATCGCCAAG 61.354 60.000 0.00 0.00 0.00 3.61
773 799 1.077501 CCCATCCAACGGCTGACAT 60.078 57.895 0.00 0.00 0.00 3.06
786 812 0.549950 CTGACATCCATCAGCCCCTT 59.450 55.000 0.00 0.00 39.77 3.95
787 813 1.770658 CTGACATCCATCAGCCCCTTA 59.229 52.381 0.00 0.00 39.77 2.69
795 821 1.476007 ATCAGCCCCTTAGCCGCTAG 61.476 60.000 0.00 0.00 0.00 3.42
1075 1112 2.820037 GCGGCCCGAAGAAGAAGG 60.820 66.667 7.68 0.00 0.00 3.46
1252 1298 2.756283 AGCCGCGGAACTAGCTCT 60.756 61.111 33.48 11.08 0.00 4.09
1608 1664 1.981495 CCCTCCCTCTTCTCTGTTTGT 59.019 52.381 0.00 0.00 0.00 2.83
1609 1665 2.027653 CCCTCCCTCTTCTCTGTTTGTC 60.028 54.545 0.00 0.00 0.00 3.18
1619 1675 4.844998 TCTCTGTTTGTCTCTCTGTCTG 57.155 45.455 0.00 0.00 0.00 3.51
1646 1704 1.069049 ACCGTAACGCACCTAGTTGTT 59.931 47.619 0.00 0.00 33.42 2.83
1652 1717 0.782384 CGCACCTAGTTGTTGTCGTC 59.218 55.000 0.00 0.00 0.00 4.20
1672 1737 4.799473 CGTCGTTGCTGCATGCCG 62.799 66.667 16.68 10.48 42.00 5.69
1675 1740 4.465512 CGTTGCTGCATGCCGTCC 62.466 66.667 16.68 0.99 42.00 4.79
1679 1744 4.487412 GCTGCATGCCGTCCTTGC 62.487 66.667 16.68 4.44 43.01 4.01
1704 1769 2.095059 GGATCGATTGCTGCTTGTTTGT 60.095 45.455 0.00 0.00 0.00 2.83
1772 1837 2.202566 GTAGCCTGATTAACACCGCTC 58.797 52.381 0.00 0.00 33.09 5.03
1800 1869 3.054878 CGTTTAAGTGCGTAGGTGAAGT 58.945 45.455 0.00 0.00 0.00 3.01
1801 1870 3.121126 CGTTTAAGTGCGTAGGTGAAGTG 60.121 47.826 0.00 0.00 0.00 3.16
1816 1886 2.041405 GTGAGGGAGGGAGGGGAG 60.041 72.222 0.00 0.00 0.00 4.30
1892 1962 7.962995 TCAAGGACTACTATTCTGATTGTCT 57.037 36.000 0.00 0.00 0.00 3.41
1893 1963 8.367660 TCAAGGACTACTATTCTGATTGTCTT 57.632 34.615 0.00 0.00 0.00 3.01
1894 1964 8.470805 TCAAGGACTACTATTCTGATTGTCTTC 58.529 37.037 0.00 0.00 0.00 2.87
1910 1980 2.225255 GTCTTCTCTCTTTTGCTGCACC 59.775 50.000 0.00 0.00 0.00 5.01
1913 1983 0.879765 CTCTCTTTTGCTGCACCCTG 59.120 55.000 0.00 0.00 0.00 4.45
1917 1987 0.879765 CTTTTGCTGCACCCTGAGAG 59.120 55.000 0.00 0.00 0.00 3.20
1970 2040 0.108424 TGTTTTGCTTGTTTGCGGCT 60.108 45.000 0.00 0.00 35.36 5.52
1991 2062 0.748005 TGGAGGAAAGCTATTGCGGC 60.748 55.000 0.00 0.00 45.42 6.53
1993 2064 1.078426 AGGAAAGCTATTGCGGCGT 60.078 52.632 9.37 0.00 45.42 5.68
1994 2065 1.090052 AGGAAAGCTATTGCGGCGTC 61.090 55.000 9.37 0.91 45.42 5.19
1995 2066 1.352056 GAAAGCTATTGCGGCGTCC 59.648 57.895 9.37 0.00 45.42 4.79
2001 2077 1.939381 GCTATTGCGGCGTCCATCATA 60.939 52.381 9.37 0.00 0.00 2.15
2006 2082 2.207229 CGGCGTCCATCATAGGGGA 61.207 63.158 0.00 0.00 0.00 4.81
2007 2083 1.754380 CGGCGTCCATCATAGGGGAA 61.754 60.000 0.00 0.00 34.34 3.97
2011 2087 2.224523 GCGTCCATCATAGGGGAAATGA 60.225 50.000 0.00 0.00 37.73 2.57
2041 2117 8.681806 TGTCACTTGATAATGTTTTGAGTTTCA 58.318 29.630 0.00 0.00 0.00 2.69
2065 2141 6.373186 AAGTGAAAACCTTGTAGCTTGTAC 57.627 37.500 0.00 0.00 0.00 2.90
2066 2142 5.681639 AGTGAAAACCTTGTAGCTTGTACT 58.318 37.500 0.00 0.00 0.00 2.73
2067 2143 6.120220 AGTGAAAACCTTGTAGCTTGTACTT 58.880 36.000 0.00 0.00 0.00 2.24
2068 2144 6.260271 AGTGAAAACCTTGTAGCTTGTACTTC 59.740 38.462 0.00 0.00 0.00 3.01
2069 2145 5.529800 TGAAAACCTTGTAGCTTGTACTTCC 59.470 40.000 0.00 0.00 0.00 3.46
2070 2146 4.976540 AACCTTGTAGCTTGTACTTCCT 57.023 40.909 0.00 0.00 0.00 3.36
2071 2147 4.538746 ACCTTGTAGCTTGTACTTCCTC 57.461 45.455 0.00 0.00 0.00 3.71
2072 2148 3.261137 ACCTTGTAGCTTGTACTTCCTCC 59.739 47.826 0.00 0.00 0.00 4.30
2073 2149 3.512680 CTTGTAGCTTGTACTTCCTCCG 58.487 50.000 0.00 0.00 0.00 4.63
2074 2150 2.522185 TGTAGCTTGTACTTCCTCCGT 58.478 47.619 0.00 0.00 0.00 4.69
2075 2151 2.490903 TGTAGCTTGTACTTCCTCCGTC 59.509 50.000 0.00 0.00 0.00 4.79
2076 2152 0.896226 AGCTTGTACTTCCTCCGTCC 59.104 55.000 0.00 0.00 0.00 4.79
2077 2153 0.458025 GCTTGTACTTCCTCCGTCCG 60.458 60.000 0.00 0.00 0.00 4.79
2078 2154 1.171308 CTTGTACTTCCTCCGTCCGA 58.829 55.000 0.00 0.00 0.00 4.55
2079 2155 1.542915 CTTGTACTTCCTCCGTCCGAA 59.457 52.381 0.00 0.00 0.00 4.30
2080 2156 1.619654 TGTACTTCCTCCGTCCGAAA 58.380 50.000 0.00 0.00 0.00 3.46
2081 2157 1.962807 TGTACTTCCTCCGTCCGAAAA 59.037 47.619 0.00 0.00 0.00 2.29
2082 2158 2.564062 TGTACTTCCTCCGTCCGAAAAT 59.436 45.455 0.00 0.00 0.00 1.82
2083 2159 3.763360 TGTACTTCCTCCGTCCGAAAATA 59.237 43.478 0.00 0.00 0.00 1.40
2084 2160 3.242549 ACTTCCTCCGTCCGAAAATAC 57.757 47.619 0.00 0.00 0.00 1.89
2085 2161 2.830321 ACTTCCTCCGTCCGAAAATACT 59.170 45.455 0.00 0.00 0.00 2.12
2086 2162 3.260128 ACTTCCTCCGTCCGAAAATACTT 59.740 43.478 0.00 0.00 0.00 2.24
2087 2163 3.241067 TCCTCCGTCCGAAAATACTTG 57.759 47.619 0.00 0.00 0.00 3.16
2088 2164 2.564062 TCCTCCGTCCGAAAATACTTGT 59.436 45.455 0.00 0.00 0.00 3.16
2089 2165 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2090 2166 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2091 2167 3.991773 CTCCGTCCGAAAATACTTGTCAA 59.008 43.478 0.00 0.00 0.00 3.18
2092 2168 4.571919 TCCGTCCGAAAATACTTGTCAAT 58.428 39.130 0.00 0.00 0.00 2.57
2093 2169 4.390603 TCCGTCCGAAAATACTTGTCAATG 59.609 41.667 0.00 0.00 0.00 2.82
2094 2170 4.436852 CCGTCCGAAAATACTTGTCAATGG 60.437 45.833 0.00 0.00 0.00 3.16
2095 2171 4.390603 CGTCCGAAAATACTTGTCAATGGA 59.609 41.667 0.00 0.00 0.00 3.41
2096 2172 5.064707 CGTCCGAAAATACTTGTCAATGGAT 59.935 40.000 0.00 0.00 0.00 3.41
2097 2173 6.256975 CGTCCGAAAATACTTGTCAATGGATA 59.743 38.462 0.00 0.00 0.00 2.59
2098 2174 7.516785 CGTCCGAAAATACTTGTCAATGGATAG 60.517 40.741 0.00 0.00 0.00 2.08
2099 2175 6.765989 TCCGAAAATACTTGTCAATGGATAGG 59.234 38.462 0.00 0.00 0.00 2.57
2100 2176 6.430451 CGAAAATACTTGTCAATGGATAGGC 58.570 40.000 0.00 0.00 0.00 3.93
2101 2177 6.260936 CGAAAATACTTGTCAATGGATAGGCT 59.739 38.462 0.00 0.00 0.00 4.58
2102 2178 6.949352 AAATACTTGTCAATGGATAGGCTG 57.051 37.500 0.00 0.00 0.00 4.85
2103 2179 2.648059 ACTTGTCAATGGATAGGCTGC 58.352 47.619 0.00 0.00 0.00 5.25
2104 2180 2.025981 ACTTGTCAATGGATAGGCTGCA 60.026 45.455 0.50 0.00 0.00 4.41
2105 2181 2.804986 TGTCAATGGATAGGCTGCAA 57.195 45.000 0.50 0.00 0.00 4.08
2106 2182 3.084536 TGTCAATGGATAGGCTGCAAA 57.915 42.857 0.50 0.00 0.00 3.68
2107 2183 3.429492 TGTCAATGGATAGGCTGCAAAA 58.571 40.909 0.50 0.00 0.00 2.44
2108 2184 3.831333 TGTCAATGGATAGGCTGCAAAAA 59.169 39.130 0.50 0.00 0.00 1.94
2109 2185 4.467082 TGTCAATGGATAGGCTGCAAAAAT 59.533 37.500 0.50 0.00 0.00 1.82
2110 2186 4.807304 GTCAATGGATAGGCTGCAAAAATG 59.193 41.667 0.50 0.00 0.00 2.32
2111 2187 4.467082 TCAATGGATAGGCTGCAAAAATGT 59.533 37.500 0.50 0.00 0.00 2.71
2112 2188 4.660789 ATGGATAGGCTGCAAAAATGTC 57.339 40.909 0.50 0.00 0.00 3.06
2113 2189 3.429492 TGGATAGGCTGCAAAAATGTCA 58.571 40.909 0.50 0.00 0.00 3.58
2114 2190 3.444742 TGGATAGGCTGCAAAAATGTCAG 59.555 43.478 0.50 0.00 0.00 3.51
2115 2191 3.445096 GGATAGGCTGCAAAAATGTCAGT 59.555 43.478 0.50 0.00 0.00 3.41
2116 2192 4.439289 GGATAGGCTGCAAAAATGTCAGTC 60.439 45.833 0.50 0.00 32.98 3.51
2117 2193 1.615392 AGGCTGCAAAAATGTCAGTCC 59.385 47.619 0.50 0.00 33.23 3.85
2118 2194 1.615392 GGCTGCAAAAATGTCAGTCCT 59.385 47.619 0.50 0.00 0.00 3.85
2119 2195 2.608752 GGCTGCAAAAATGTCAGTCCTG 60.609 50.000 0.50 0.00 0.00 3.86
2120 2196 2.294233 GCTGCAAAAATGTCAGTCCTGA 59.706 45.455 0.00 0.00 37.24 3.86
2121 2197 3.057033 GCTGCAAAAATGTCAGTCCTGAT 60.057 43.478 0.00 0.00 42.18 2.90
2122 2198 4.482386 CTGCAAAAATGTCAGTCCTGATG 58.518 43.478 0.00 0.00 42.18 3.07
2123 2199 3.256383 TGCAAAAATGTCAGTCCTGATGG 59.744 43.478 0.00 0.00 42.18 3.51
2124 2200 3.841643 CAAAAATGTCAGTCCTGATGGC 58.158 45.455 0.00 0.00 42.18 4.40
2125 2201 3.446442 AAAATGTCAGTCCTGATGGCT 57.554 42.857 0.00 0.00 42.18 4.75
2126 2202 2.414994 AATGTCAGTCCTGATGGCTG 57.585 50.000 0.00 0.00 42.18 4.85
2127 2203 1.576577 ATGTCAGTCCTGATGGCTGA 58.423 50.000 0.00 0.00 42.18 4.26
2129 2205 0.459237 GTCAGTCCTGATGGCTGACG 60.459 60.000 10.73 0.00 46.55 4.35
2130 2206 1.153489 CAGTCCTGATGGCTGACGG 60.153 63.158 0.00 0.00 38.72 4.79
2131 2207 1.305297 AGTCCTGATGGCTGACGGA 60.305 57.895 0.00 0.00 34.24 4.69
2132 2208 1.153549 GTCCTGATGGCTGACGGAC 60.154 63.158 0.00 0.00 37.57 4.79
2133 2209 2.202797 CCTGATGGCTGACGGACG 60.203 66.667 0.00 0.00 0.00 4.79
2134 2210 2.710902 CCTGATGGCTGACGGACGA 61.711 63.158 0.00 0.00 0.00 4.20
2135 2211 1.215382 CTGATGGCTGACGGACGAA 59.785 57.895 0.00 0.00 0.00 3.85
2136 2212 0.389817 CTGATGGCTGACGGACGAAA 60.390 55.000 0.00 0.00 0.00 3.46
2137 2213 0.249120 TGATGGCTGACGGACGAAAT 59.751 50.000 0.00 0.00 0.00 2.17
2138 2214 0.931005 GATGGCTGACGGACGAAATC 59.069 55.000 0.00 0.00 0.00 2.17
2139 2215 0.249120 ATGGCTGACGGACGAAATCA 59.751 50.000 0.00 0.00 0.00 2.57
2140 2216 0.669318 TGGCTGACGGACGAAATCAC 60.669 55.000 0.00 0.00 0.00 3.06
2141 2217 0.389948 GGCTGACGGACGAAATCACT 60.390 55.000 0.00 0.00 0.00 3.41
2142 2218 1.135199 GGCTGACGGACGAAATCACTA 60.135 52.381 0.00 0.00 0.00 2.74
2143 2219 2.481449 GGCTGACGGACGAAATCACTAT 60.481 50.000 0.00 0.00 0.00 2.12
2144 2220 3.187700 GCTGACGGACGAAATCACTATT 58.812 45.455 0.00 0.00 0.00 1.73
2145 2221 3.243177 GCTGACGGACGAAATCACTATTC 59.757 47.826 0.00 0.00 0.00 1.75
2146 2222 4.673441 CTGACGGACGAAATCACTATTCT 58.327 43.478 0.00 0.00 0.00 2.40
2147 2223 4.421058 TGACGGACGAAATCACTATTCTG 58.579 43.478 0.00 0.00 0.00 3.02
2148 2224 3.782046 ACGGACGAAATCACTATTCTGG 58.218 45.455 0.00 0.00 0.00 3.86
2149 2225 2.540101 CGGACGAAATCACTATTCTGGC 59.460 50.000 0.00 0.00 0.00 4.85
2150 2226 2.872858 GGACGAAATCACTATTCTGGCC 59.127 50.000 0.00 0.00 0.00 5.36
2151 2227 3.432326 GGACGAAATCACTATTCTGGCCT 60.432 47.826 3.32 0.00 30.67 5.19
2152 2228 4.192317 GACGAAATCACTATTCTGGCCTT 58.808 43.478 3.32 0.00 0.00 4.35
2153 2229 4.589908 ACGAAATCACTATTCTGGCCTTT 58.410 39.130 3.32 0.00 0.00 3.11
2154 2230 5.010282 ACGAAATCACTATTCTGGCCTTTT 58.990 37.500 3.32 0.00 0.00 2.27
2155 2231 5.476945 ACGAAATCACTATTCTGGCCTTTTT 59.523 36.000 3.32 0.00 0.00 1.94
2156 2232 6.657541 ACGAAATCACTATTCTGGCCTTTTTA 59.342 34.615 3.32 0.00 0.00 1.52
2157 2233 7.175990 ACGAAATCACTATTCTGGCCTTTTTAA 59.824 33.333 3.32 0.00 0.00 1.52
2158 2234 7.484959 CGAAATCACTATTCTGGCCTTTTTAAC 59.515 37.037 3.32 0.00 0.00 2.01
2159 2235 7.775053 AATCACTATTCTGGCCTTTTTAACA 57.225 32.000 3.32 0.00 0.00 2.41
2160 2236 7.775053 ATCACTATTCTGGCCTTTTTAACAA 57.225 32.000 3.32 0.00 0.00 2.83
2161 2237 7.775053 TCACTATTCTGGCCTTTTTAACAAT 57.225 32.000 3.32 0.00 0.00 2.71
2162 2238 7.826690 TCACTATTCTGGCCTTTTTAACAATC 58.173 34.615 3.32 0.00 0.00 2.67
2163 2239 7.669722 TCACTATTCTGGCCTTTTTAACAATCT 59.330 33.333 3.32 0.00 0.00 2.40
2164 2240 8.306761 CACTATTCTGGCCTTTTTAACAATCTT 58.693 33.333 3.32 0.00 0.00 2.40
2165 2241 8.870116 ACTATTCTGGCCTTTTTAACAATCTTT 58.130 29.630 3.32 0.00 0.00 2.52
2166 2242 7.967890 ATTCTGGCCTTTTTAACAATCTTTG 57.032 32.000 3.32 0.00 0.00 2.77
2168 2244 6.512297 TCTGGCCTTTTTAACAATCTTTGTC 58.488 36.000 3.32 0.00 44.59 3.18
2169 2245 6.097554 TCTGGCCTTTTTAACAATCTTTGTCA 59.902 34.615 3.32 0.00 44.59 3.58
2170 2246 6.045955 TGGCCTTTTTAACAATCTTTGTCAC 58.954 36.000 3.32 0.00 44.59 3.67
2171 2247 6.045955 GGCCTTTTTAACAATCTTTGTCACA 58.954 36.000 0.00 0.00 44.59 3.58
2172 2248 6.536941 GGCCTTTTTAACAATCTTTGTCACAA 59.463 34.615 0.00 0.00 44.59 3.33
2173 2249 7.065204 GGCCTTTTTAACAATCTTTGTCACAAA 59.935 33.333 2.24 2.24 44.59 2.83
2174 2250 8.447053 GCCTTTTTAACAATCTTTGTCACAAAA 58.553 29.630 4.13 0.00 44.59 2.44
2180 2256 9.868277 TTAACAATCTTTGTCACAAAATGAACT 57.132 25.926 14.20 0.00 44.59 3.01
2181 2257 8.776376 AACAATCTTTGTCACAAAATGAACTT 57.224 26.923 14.20 0.00 44.59 2.66
2182 2258 8.188531 ACAATCTTTGTCACAAAATGAACTTG 57.811 30.769 14.20 9.46 40.56 3.16
2183 2259 8.034215 ACAATCTTTGTCACAAAATGAACTTGA 58.966 29.630 14.20 3.08 40.56 3.02
2184 2260 7.992180 ATCTTTGTCACAAAATGAACTTGAC 57.008 32.000 4.13 0.00 39.72 3.18
2185 2261 6.918626 TCTTTGTCACAAAATGAACTTGACA 58.081 32.000 4.13 0.00 43.65 3.58
2186 2262 7.546358 TCTTTGTCACAAAATGAACTTGACAT 58.454 30.769 4.13 0.00 44.46 3.06
2187 2263 7.488792 TCTTTGTCACAAAATGAACTTGACATG 59.511 33.333 4.13 0.00 44.46 3.21
2188 2264 6.448207 TGTCACAAAATGAACTTGACATGA 57.552 33.333 0.00 0.00 41.20 3.07
2189 2265 6.861144 TGTCACAAAATGAACTTGACATGAA 58.139 32.000 0.00 0.00 41.20 2.57
2190 2266 7.318893 TGTCACAAAATGAACTTGACATGAAA 58.681 30.769 0.00 0.00 41.20 2.69
2191 2267 7.816513 TGTCACAAAATGAACTTGACATGAAAA 59.183 29.630 0.00 0.00 41.20 2.29
2192 2268 8.819974 GTCACAAAATGAACTTGACATGAAAAT 58.180 29.630 0.00 0.00 39.72 1.82
2220 2296 9.773328 TTTCATAATCTGATTCTTTTAGCAACG 57.227 29.630 6.10 0.00 32.72 4.10
2221 2297 7.409697 TCATAATCTGATTCTTTTAGCAACGC 58.590 34.615 6.10 0.00 0.00 4.84
2222 2298 4.622701 ATCTGATTCTTTTAGCAACGCC 57.377 40.909 0.00 0.00 0.00 5.68
2223 2299 3.407698 TCTGATTCTTTTAGCAACGCCA 58.592 40.909 0.00 0.00 0.00 5.69
2224 2300 3.188460 TCTGATTCTTTTAGCAACGCCAC 59.812 43.478 0.00 0.00 0.00 5.01
2225 2301 2.881513 TGATTCTTTTAGCAACGCCACA 59.118 40.909 0.00 0.00 0.00 4.17
2226 2302 3.058293 TGATTCTTTTAGCAACGCCACAG 60.058 43.478 0.00 0.00 0.00 3.66
2227 2303 0.591170 TCTTTTAGCAACGCCACAGC 59.409 50.000 0.00 0.00 0.00 4.40
2228 2304 0.387239 CTTTTAGCAACGCCACAGCC 60.387 55.000 0.00 0.00 34.57 4.85
2229 2305 1.801309 TTTTAGCAACGCCACAGCCC 61.801 55.000 0.00 0.00 34.57 5.19
2260 2336 6.497785 TTTTTCTCCATATAAAAACGCCGA 57.502 33.333 0.00 0.00 31.46 5.54
2261 2337 6.497785 TTTTCTCCATATAAAAACGCCGAA 57.502 33.333 0.00 0.00 0.00 4.30
2262 2338 5.728351 TTCTCCATATAAAAACGCCGAAG 57.272 39.130 0.00 0.00 0.00 3.79
2263 2339 4.761975 TCTCCATATAAAAACGCCGAAGT 58.238 39.130 0.00 0.00 0.00 3.01
2264 2340 5.904941 TCTCCATATAAAAACGCCGAAGTA 58.095 37.500 0.00 0.00 0.00 2.24
2265 2341 5.981315 TCTCCATATAAAAACGCCGAAGTAG 59.019 40.000 0.00 0.00 0.00 2.57
2266 2342 4.508861 TCCATATAAAAACGCCGAAGTAGC 59.491 41.667 0.00 0.00 0.00 3.58
2267 2343 4.510340 CCATATAAAAACGCCGAAGTAGCT 59.490 41.667 0.00 0.00 0.00 3.32
2268 2344 5.333111 CCATATAAAAACGCCGAAGTAGCTC 60.333 44.000 0.00 0.00 0.00 4.09
2269 2345 0.788391 AAAAACGCCGAAGTAGCTCG 59.212 50.000 0.00 0.00 38.58 5.03
2270 2346 1.623973 AAAACGCCGAAGTAGCTCGC 61.624 55.000 0.00 0.00 37.51 5.03
2271 2347 2.758770 AAACGCCGAAGTAGCTCGCA 62.759 55.000 0.00 0.00 37.51 5.10
2272 2348 2.278857 CGCCGAAGTAGCTCGCAT 60.279 61.111 0.00 0.00 37.51 4.73
2273 2349 1.878522 CGCCGAAGTAGCTCGCATT 60.879 57.895 0.00 0.00 37.51 3.56
2274 2350 1.421410 CGCCGAAGTAGCTCGCATTT 61.421 55.000 0.00 0.00 37.51 2.32
2275 2351 0.301987 GCCGAAGTAGCTCGCATTTC 59.698 55.000 0.00 0.00 37.51 2.17
2276 2352 1.640428 CCGAAGTAGCTCGCATTTCA 58.360 50.000 0.00 0.00 37.51 2.69
2277 2353 1.590238 CCGAAGTAGCTCGCATTTCAG 59.410 52.381 0.00 0.00 37.51 3.02
2278 2354 2.530177 CGAAGTAGCTCGCATTTCAGA 58.470 47.619 0.00 0.00 31.04 3.27
2279 2355 2.280183 CGAAGTAGCTCGCATTTCAGAC 59.720 50.000 0.00 0.00 31.04 3.51
2280 2356 2.301577 AGTAGCTCGCATTTCAGACC 57.698 50.000 0.00 0.00 0.00 3.85
2281 2357 1.134670 AGTAGCTCGCATTTCAGACCC 60.135 52.381 0.00 0.00 0.00 4.46
2282 2358 0.901827 TAGCTCGCATTTCAGACCCA 59.098 50.000 0.00 0.00 0.00 4.51
2283 2359 0.674895 AGCTCGCATTTCAGACCCAC 60.675 55.000 0.00 0.00 0.00 4.61
2284 2360 0.955428 GCTCGCATTTCAGACCCACA 60.955 55.000 0.00 0.00 0.00 4.17
2285 2361 1.742761 CTCGCATTTCAGACCCACAT 58.257 50.000 0.00 0.00 0.00 3.21
2286 2362 2.905075 CTCGCATTTCAGACCCACATA 58.095 47.619 0.00 0.00 0.00 2.29
2287 2363 2.609459 CTCGCATTTCAGACCCACATAC 59.391 50.000 0.00 0.00 0.00 2.39
2288 2364 1.327460 CGCATTTCAGACCCACATACG 59.673 52.381 0.00 0.00 0.00 3.06
2289 2365 2.627945 GCATTTCAGACCCACATACGA 58.372 47.619 0.00 0.00 0.00 3.43
2290 2366 3.006940 GCATTTCAGACCCACATACGAA 58.993 45.455 0.00 0.00 0.00 3.85
2291 2367 3.181510 GCATTTCAGACCCACATACGAAC 60.182 47.826 0.00 0.00 0.00 3.95
2292 2368 2.357327 TTCAGACCCACATACGAACG 57.643 50.000 0.00 0.00 0.00 3.95
2293 2369 0.108992 TCAGACCCACATACGAACGC 60.109 55.000 0.00 0.00 0.00 4.84
2294 2370 1.082117 CAGACCCACATACGAACGCC 61.082 60.000 0.00 0.00 0.00 5.68
2295 2371 1.079681 GACCCACATACGAACGCCA 60.080 57.895 0.00 0.00 0.00 5.69
2296 2372 0.671163 GACCCACATACGAACGCCAA 60.671 55.000 0.00 0.00 0.00 4.52
2297 2373 0.672401 ACCCACATACGAACGCCAAG 60.672 55.000 0.00 0.00 0.00 3.61
2298 2374 1.423845 CCACATACGAACGCCAAGC 59.576 57.895 0.00 0.00 0.00 4.01
2299 2375 1.019278 CCACATACGAACGCCAAGCT 61.019 55.000 0.00 0.00 0.00 3.74
2300 2376 1.635844 CACATACGAACGCCAAGCTA 58.364 50.000 0.00 0.00 0.00 3.32
2301 2377 1.588404 CACATACGAACGCCAAGCTAG 59.412 52.381 0.00 0.00 0.00 3.42
2302 2378 0.577269 CATACGAACGCCAAGCTAGC 59.423 55.000 6.62 6.62 0.00 3.42
2303 2379 0.460311 ATACGAACGCCAAGCTAGCT 59.540 50.000 12.68 12.68 0.00 3.32
2304 2380 0.179145 TACGAACGCCAAGCTAGCTC 60.179 55.000 19.65 4.61 0.00 4.09
2305 2381 2.167861 CGAACGCCAAGCTAGCTCC 61.168 63.158 19.65 8.74 0.00 4.70
2306 2382 1.079127 GAACGCCAAGCTAGCTCCA 60.079 57.895 19.65 0.00 0.00 3.86
2307 2383 1.362406 GAACGCCAAGCTAGCTCCAC 61.362 60.000 19.65 9.17 0.00 4.02
2308 2384 2.111999 AACGCCAAGCTAGCTCCACA 62.112 55.000 19.65 0.00 0.00 4.17
2309 2385 1.153289 CGCCAAGCTAGCTCCACAT 60.153 57.895 19.65 0.00 0.00 3.21
2310 2386 0.104855 CGCCAAGCTAGCTCCACATA 59.895 55.000 19.65 0.00 0.00 2.29
2311 2387 1.587547 GCCAAGCTAGCTCCACATAC 58.412 55.000 19.65 0.00 0.00 2.39
2312 2388 1.858091 CCAAGCTAGCTCCACATACG 58.142 55.000 19.65 0.00 0.00 3.06
2313 2389 1.409064 CCAAGCTAGCTCCACATACGA 59.591 52.381 19.65 0.00 0.00 3.43
2314 2390 2.159099 CCAAGCTAGCTCCACATACGAA 60.159 50.000 19.65 0.00 0.00 3.85
2315 2391 2.860735 CAAGCTAGCTCCACATACGAAC 59.139 50.000 19.65 0.00 0.00 3.95
2316 2392 1.065701 AGCTAGCTCCACATACGAACG 59.934 52.381 12.68 0.00 0.00 3.95
2317 2393 1.478137 CTAGCTCCACATACGAACGC 58.522 55.000 0.00 0.00 0.00 4.84
2318 2394 0.101759 TAGCTCCACATACGAACGCC 59.898 55.000 0.00 0.00 0.00 5.68
2319 2395 1.447140 GCTCCACATACGAACGCCA 60.447 57.895 0.00 0.00 0.00 5.69
2320 2396 1.017177 GCTCCACATACGAACGCCAA 61.017 55.000 0.00 0.00 0.00 4.52
2321 2397 0.999406 CTCCACATACGAACGCCAAG 59.001 55.000 0.00 0.00 0.00 3.61
2322 2398 1.017177 TCCACATACGAACGCCAAGC 61.017 55.000 0.00 0.00 0.00 4.01
2323 2399 1.019278 CCACATACGAACGCCAAGCT 61.019 55.000 0.00 0.00 0.00 3.74
2324 2400 1.635844 CACATACGAACGCCAAGCTA 58.364 50.000 0.00 0.00 0.00 3.32
2325 2401 1.588404 CACATACGAACGCCAAGCTAG 59.412 52.381 0.00 0.00 0.00 3.42
2326 2402 0.577269 CATACGAACGCCAAGCTAGC 59.423 55.000 6.62 6.62 0.00 3.42
2327 2403 0.460311 ATACGAACGCCAAGCTAGCT 59.540 50.000 12.68 12.68 0.00 3.32
2328 2404 1.097232 TACGAACGCCAAGCTAGCTA 58.903 50.000 19.70 0.00 0.00 3.32
2329 2405 0.179134 ACGAACGCCAAGCTAGCTAG 60.179 55.000 19.70 16.84 0.00 3.42
2338 2414 2.722487 GCTAGCTAGCGCTTCCGA 59.278 61.111 28.89 2.06 46.47 4.55
2339 2415 1.659026 GCTAGCTAGCGCTTCCGAC 60.659 63.158 28.89 1.73 46.47 4.79
2340 2416 1.008309 CTAGCTAGCGCTTCCGACC 60.008 63.158 18.68 0.00 46.47 4.79
2341 2417 2.409241 CTAGCTAGCGCTTCCGACCC 62.409 65.000 18.68 0.00 46.47 4.46
2342 2418 4.143333 GCTAGCGCTTCCGACCCA 62.143 66.667 18.68 0.00 36.29 4.51
2343 2419 2.202756 CTAGCGCTTCCGACCCAC 60.203 66.667 18.68 0.00 36.29 4.61
2344 2420 2.992689 TAGCGCTTCCGACCCACA 60.993 61.111 18.68 0.00 36.29 4.17
2345 2421 2.298158 CTAGCGCTTCCGACCCACAT 62.298 60.000 18.68 0.00 36.29 3.21
2346 2422 2.572095 TAGCGCTTCCGACCCACATG 62.572 60.000 18.68 0.00 36.29 3.21
2347 2423 2.819595 CGCTTCCGACCCACATGG 60.820 66.667 0.00 0.00 41.37 3.66
2348 2424 2.668632 GCTTCCGACCCACATGGA 59.331 61.111 0.00 0.00 37.39 3.41
2349 2425 1.002624 GCTTCCGACCCACATGGAA 60.003 57.895 0.00 0.00 39.38 3.53
2350 2426 0.608035 GCTTCCGACCCACATGGAAA 60.608 55.000 0.00 0.00 41.02 3.13
2351 2427 1.165270 CTTCCGACCCACATGGAAAC 58.835 55.000 0.00 0.00 41.02 2.78
2352 2428 0.604243 TTCCGACCCACATGGAAACG 60.604 55.000 0.00 2.32 38.77 3.60
2353 2429 2.686816 CCGACCCACATGGAAACGC 61.687 63.158 0.00 0.00 37.39 4.84
2354 2430 2.686816 CGACCCACATGGAAACGCC 61.687 63.158 0.00 0.00 37.39 5.68
2362 2438 2.515057 TGGAAACGCCAAGCACGT 60.515 55.556 0.00 0.00 45.87 4.49
2377 2453 2.968156 CGTTGGCGTTTCCGTCCA 60.968 61.111 0.00 0.00 38.09 4.02
2378 2454 2.535788 CGTTGGCGTTTCCGTCCAA 61.536 57.895 6.82 6.82 43.23 3.53
2379 2455 1.728672 GTTGGCGTTTCCGTCCAAA 59.271 52.632 10.82 0.00 45.22 3.28
2380 2456 0.593008 GTTGGCGTTTCCGTCCAAAC 60.593 55.000 10.82 0.00 45.22 2.93
2381 2457 1.726533 TTGGCGTTTCCGTCCAAACC 61.727 55.000 7.99 0.00 42.82 3.27
2382 2458 1.895231 GGCGTTTCCGTCCAAACCT 60.895 57.895 0.00 0.00 33.37 3.50
2383 2459 0.603439 GGCGTTTCCGTCCAAACCTA 60.603 55.000 0.00 0.00 33.37 3.08
2384 2460 1.228533 GCGTTTCCGTCCAAACCTAA 58.771 50.000 0.00 0.00 33.37 2.69
2385 2461 1.603326 GCGTTTCCGTCCAAACCTAAA 59.397 47.619 0.00 0.00 33.37 1.85
2386 2462 2.602933 GCGTTTCCGTCCAAACCTAAAC 60.603 50.000 0.00 0.00 33.37 2.01
2387 2463 2.348779 CGTTTCCGTCCAAACCTAAACG 60.349 50.000 0.00 0.00 40.50 3.60
2388 2464 1.228533 TTCCGTCCAAACCTAAACGC 58.771 50.000 0.00 0.00 33.95 4.84
2389 2465 0.603439 TCCGTCCAAACCTAAACGCC 60.603 55.000 0.00 0.00 33.95 5.68
2390 2466 0.885596 CCGTCCAAACCTAAACGCCA 60.886 55.000 0.00 0.00 33.95 5.69
2391 2467 1.161843 CGTCCAAACCTAAACGCCAT 58.838 50.000 0.00 0.00 0.00 4.40
2392 2468 1.135803 CGTCCAAACCTAAACGCCATG 60.136 52.381 0.00 0.00 0.00 3.66
2393 2469 2.156098 GTCCAAACCTAAACGCCATGA 58.844 47.619 0.00 0.00 0.00 3.07
2394 2470 2.752903 GTCCAAACCTAAACGCCATGAT 59.247 45.455 0.00 0.00 0.00 2.45
2395 2471 3.013921 TCCAAACCTAAACGCCATGATC 58.986 45.455 0.00 0.00 0.00 2.92
2396 2472 2.752354 CCAAACCTAAACGCCATGATCA 59.248 45.455 0.00 0.00 0.00 2.92
2397 2473 3.381272 CCAAACCTAAACGCCATGATCAT 59.619 43.478 1.18 1.18 0.00 2.45
2398 2474 4.142182 CCAAACCTAAACGCCATGATCATT 60.142 41.667 5.16 0.00 0.00 2.57
2399 2475 4.637483 AACCTAAACGCCATGATCATTG 57.363 40.909 5.16 3.61 0.00 2.82
2400 2476 2.951642 ACCTAAACGCCATGATCATTGG 59.048 45.455 5.16 12.03 0.00 3.16
2401 2477 2.287788 CCTAAACGCCATGATCATTGGC 60.288 50.000 26.52 26.52 44.69 4.52
2406 2482 1.563111 GCCATGATCATTGGCGTTTG 58.437 50.000 24.11 7.37 39.06 2.93
2407 2483 1.135024 GCCATGATCATTGGCGTTTGT 60.135 47.619 24.11 0.00 39.06 2.83
2408 2484 2.098934 GCCATGATCATTGGCGTTTGTA 59.901 45.455 24.11 0.00 39.06 2.41
2409 2485 3.793129 GCCATGATCATTGGCGTTTGTAG 60.793 47.826 24.11 4.43 39.06 2.74
2410 2486 3.365832 CATGATCATTGGCGTTTGTAGC 58.634 45.455 5.16 0.00 0.00 3.58
2411 2487 2.431454 TGATCATTGGCGTTTGTAGCA 58.569 42.857 0.00 0.00 36.08 3.49
2412 2488 2.161410 TGATCATTGGCGTTTGTAGCAC 59.839 45.455 0.00 0.00 36.08 4.40
2413 2489 0.878416 TCATTGGCGTTTGTAGCACC 59.122 50.000 0.00 0.00 36.08 5.01
2414 2490 0.595588 CATTGGCGTTTGTAGCACCA 59.404 50.000 0.00 0.00 36.08 4.17
2415 2491 1.000827 CATTGGCGTTTGTAGCACCAA 60.001 47.619 0.00 0.00 44.04 3.67
2416 2492 0.382515 TTGGCGTTTGTAGCACCAAC 59.617 50.000 0.00 0.00 35.53 3.77
2417 2493 1.284715 GGCGTTTGTAGCACCAACC 59.715 57.895 0.00 0.00 36.08 3.77
2418 2494 1.170290 GGCGTTTGTAGCACCAACCT 61.170 55.000 0.00 0.00 36.08 3.50
2419 2495 1.515081 GCGTTTGTAGCACCAACCTA 58.485 50.000 0.00 0.00 34.19 3.08
2420 2496 2.081462 GCGTTTGTAGCACCAACCTAT 58.919 47.619 0.00 0.00 34.19 2.57
2421 2497 3.264104 GCGTTTGTAGCACCAACCTATA 58.736 45.455 0.00 0.00 34.19 1.31
2422 2498 3.685756 GCGTTTGTAGCACCAACCTATAA 59.314 43.478 0.00 0.00 34.19 0.98
2423 2499 4.154556 GCGTTTGTAGCACCAACCTATAAA 59.845 41.667 0.00 0.00 34.19 1.40
2424 2500 5.163693 GCGTTTGTAGCACCAACCTATAAAT 60.164 40.000 0.00 0.00 31.58 1.40
2425 2501 6.483687 CGTTTGTAGCACCAACCTATAAATC 58.516 40.000 0.00 0.00 31.58 2.17
2426 2502 6.483687 GTTTGTAGCACCAACCTATAAATCG 58.516 40.000 0.00 0.00 31.58 3.34
2427 2503 4.699637 TGTAGCACCAACCTATAAATCGG 58.300 43.478 0.00 0.00 0.00 4.18
2428 2504 4.406326 TGTAGCACCAACCTATAAATCGGA 59.594 41.667 0.00 0.00 0.00 4.55
2429 2505 4.073293 AGCACCAACCTATAAATCGGAG 57.927 45.455 0.00 0.00 0.00 4.63
2430 2506 3.454812 AGCACCAACCTATAAATCGGAGT 59.545 43.478 0.00 0.00 0.00 3.85
2431 2507 3.560068 GCACCAACCTATAAATCGGAGTG 59.440 47.826 0.00 0.00 0.00 3.51
2432 2508 4.127171 CACCAACCTATAAATCGGAGTGG 58.873 47.826 0.00 0.00 36.07 4.00
2433 2509 3.778629 ACCAACCTATAAATCGGAGTGGT 59.221 43.478 7.40 7.40 37.39 4.16
2434 2510 4.964262 ACCAACCTATAAATCGGAGTGGTA 59.036 41.667 10.03 0.00 39.08 3.25
2435 2511 5.070047 ACCAACCTATAAATCGGAGTGGTAG 59.930 44.000 10.03 0.00 39.08 3.18
2436 2512 5.303589 CCAACCTATAAATCGGAGTGGTAGA 59.696 44.000 0.00 0.00 0.00 2.59
2437 2513 6.448006 CAACCTATAAATCGGAGTGGTAGAG 58.552 44.000 0.00 0.00 0.00 2.43
2438 2514 5.703310 ACCTATAAATCGGAGTGGTAGAGT 58.297 41.667 0.00 0.00 0.00 3.24
2439 2515 5.769162 ACCTATAAATCGGAGTGGTAGAGTC 59.231 44.000 0.00 0.00 0.00 3.36
2440 2516 4.832590 ATAAATCGGAGTGGTAGAGTCG 57.167 45.455 0.00 0.00 0.00 4.18
2441 2517 2.125773 AATCGGAGTGGTAGAGTCGT 57.874 50.000 0.00 0.00 0.00 4.34
2442 2518 2.996249 ATCGGAGTGGTAGAGTCGTA 57.004 50.000 0.00 0.00 0.00 3.43
2443 2519 2.306341 TCGGAGTGGTAGAGTCGTAG 57.694 55.000 0.00 0.00 0.00 3.51
2444 2520 1.552337 TCGGAGTGGTAGAGTCGTAGT 59.448 52.381 0.00 0.00 0.00 2.73
2445 2521 1.932511 CGGAGTGGTAGAGTCGTAGTC 59.067 57.143 0.00 0.00 0.00 2.59
2446 2522 1.932511 GGAGTGGTAGAGTCGTAGTCG 59.067 57.143 0.00 0.00 38.55 4.18
2447 2523 2.615869 GAGTGGTAGAGTCGTAGTCGT 58.384 52.381 0.00 0.00 38.33 4.34
2448 2524 3.429547 GGAGTGGTAGAGTCGTAGTCGTA 60.430 52.174 0.00 0.00 38.33 3.43
2449 2525 3.779759 AGTGGTAGAGTCGTAGTCGTAG 58.220 50.000 0.00 0.00 38.33 3.51
2450 2526 2.863137 GTGGTAGAGTCGTAGTCGTAGG 59.137 54.545 0.00 0.00 38.33 3.18
2451 2527 2.760650 TGGTAGAGTCGTAGTCGTAGGA 59.239 50.000 0.00 0.00 38.33 2.94
2452 2528 3.181482 TGGTAGAGTCGTAGTCGTAGGAG 60.181 52.174 0.00 0.00 38.33 3.69
2453 2529 3.067461 GGTAGAGTCGTAGTCGTAGGAGA 59.933 52.174 0.00 0.00 38.33 3.71
2454 2530 3.441496 AGAGTCGTAGTCGTAGGAGAG 57.559 52.381 0.00 0.00 38.33 3.20
2455 2531 2.101249 AGAGTCGTAGTCGTAGGAGAGG 59.899 54.545 0.00 0.00 38.33 3.69
2456 2532 1.830477 AGTCGTAGTCGTAGGAGAGGT 59.170 52.381 0.00 0.00 38.33 3.85
2457 2533 3.027412 AGTCGTAGTCGTAGGAGAGGTA 58.973 50.000 0.00 0.00 38.33 3.08
2458 2534 3.449018 AGTCGTAGTCGTAGGAGAGGTAA 59.551 47.826 0.00 0.00 38.33 2.85
2459 2535 3.801594 GTCGTAGTCGTAGGAGAGGTAAG 59.198 52.174 0.00 0.00 38.33 2.34
2460 2536 3.701542 TCGTAGTCGTAGGAGAGGTAAGA 59.298 47.826 0.00 0.00 38.33 2.10
2461 2537 4.160439 TCGTAGTCGTAGGAGAGGTAAGAA 59.840 45.833 0.00 0.00 38.33 2.52
2462 2538 4.872691 CGTAGTCGTAGGAGAGGTAAGAAA 59.127 45.833 0.00 0.00 0.00 2.52
2463 2539 5.352569 CGTAGTCGTAGGAGAGGTAAGAAAA 59.647 44.000 0.00 0.00 0.00 2.29
2464 2540 5.900865 AGTCGTAGGAGAGGTAAGAAAAG 57.099 43.478 0.00 0.00 0.00 2.27
2465 2541 5.568392 AGTCGTAGGAGAGGTAAGAAAAGA 58.432 41.667 0.00 0.00 0.00 2.52
2466 2542 6.189133 AGTCGTAGGAGAGGTAAGAAAAGAT 58.811 40.000 0.00 0.00 0.00 2.40
2467 2543 6.095720 AGTCGTAGGAGAGGTAAGAAAAGATG 59.904 42.308 0.00 0.00 0.00 2.90
2468 2544 5.360144 TCGTAGGAGAGGTAAGAAAAGATGG 59.640 44.000 0.00 0.00 0.00 3.51
2469 2545 5.452077 CGTAGGAGAGGTAAGAAAAGATGGG 60.452 48.000 0.00 0.00 0.00 4.00
2470 2546 4.439860 AGGAGAGGTAAGAAAAGATGGGT 58.560 43.478 0.00 0.00 0.00 4.51
2471 2547 4.471747 AGGAGAGGTAAGAAAAGATGGGTC 59.528 45.833 0.00 0.00 0.00 4.46
2472 2548 4.434520 GAGAGGTAAGAAAAGATGGGTCG 58.565 47.826 0.00 0.00 0.00 4.79
2473 2549 3.838903 AGAGGTAAGAAAAGATGGGTCGT 59.161 43.478 0.00 0.00 0.00 4.34
2474 2550 4.286291 AGAGGTAAGAAAAGATGGGTCGTT 59.714 41.667 0.00 0.00 0.00 3.85
2475 2551 4.324267 AGGTAAGAAAAGATGGGTCGTTG 58.676 43.478 0.00 0.00 0.00 4.10
2476 2552 3.119955 GGTAAGAAAAGATGGGTCGTTGC 60.120 47.826 0.00 0.00 0.00 4.17
2477 2553 2.270352 AGAAAAGATGGGTCGTTGCA 57.730 45.000 0.00 0.00 0.00 4.08
2478 2554 2.795329 AGAAAAGATGGGTCGTTGCAT 58.205 42.857 0.00 0.00 0.00 3.96
2479 2555 2.489329 AGAAAAGATGGGTCGTTGCATG 59.511 45.455 0.00 0.00 0.00 4.06
2480 2556 1.176527 AAAGATGGGTCGTTGCATGG 58.823 50.000 0.00 0.00 0.00 3.66
2481 2557 0.327924 AAGATGGGTCGTTGCATGGA 59.672 50.000 0.00 0.00 0.00 3.41
2482 2558 0.107508 AGATGGGTCGTTGCATGGAG 60.108 55.000 0.00 0.00 0.00 3.86
2483 2559 1.077501 ATGGGTCGTTGCATGGAGG 60.078 57.895 0.00 0.00 0.00 4.30
2484 2560 2.438434 GGGTCGTTGCATGGAGGG 60.438 66.667 0.00 0.00 0.00 4.30
2485 2561 3.134127 GGTCGTTGCATGGAGGGC 61.134 66.667 0.00 0.00 0.00 5.19
2486 2562 2.045926 GTCGTTGCATGGAGGGCT 60.046 61.111 0.00 0.00 0.00 5.19
2487 2563 2.046023 TCGTTGCATGGAGGGCTG 60.046 61.111 0.00 0.00 0.00 4.85
2488 2564 3.136123 CGTTGCATGGAGGGCTGG 61.136 66.667 0.00 0.00 0.00 4.85
2489 2565 3.455469 GTTGCATGGAGGGCTGGC 61.455 66.667 0.00 0.00 0.00 4.85
2490 2566 3.982111 TTGCATGGAGGGCTGGCA 61.982 61.111 2.88 0.00 0.00 4.92
2491 2567 4.746309 TGCATGGAGGGCTGGCAC 62.746 66.667 2.88 0.00 0.00 5.01
2500 2576 4.830765 GGCTGGCACGCGATGGTA 62.831 66.667 15.93 0.00 0.00 3.25
2501 2577 3.264897 GCTGGCACGCGATGGTAG 61.265 66.667 15.93 5.42 0.00 3.18
2502 2578 2.494445 CTGGCACGCGATGGTAGA 59.506 61.111 15.93 0.00 0.00 2.59
2503 2579 1.589993 CTGGCACGCGATGGTAGAG 60.590 63.158 15.93 0.00 0.00 2.43
2504 2580 2.284798 CTGGCACGCGATGGTAGAGT 62.285 60.000 15.93 0.00 0.00 3.24
2505 2581 1.878522 GGCACGCGATGGTAGAGTG 60.879 63.158 15.93 0.00 41.31 3.51
2506 2582 1.878522 GCACGCGATGGTAGAGTGG 60.879 63.158 15.93 0.00 39.30 4.00
2507 2583 1.511305 CACGCGATGGTAGAGTGGT 59.489 57.895 15.93 0.00 36.10 4.16
2508 2584 0.736636 CACGCGATGGTAGAGTGGTA 59.263 55.000 15.93 0.00 36.10 3.25
2509 2585 0.737219 ACGCGATGGTAGAGTGGTAC 59.263 55.000 15.93 0.00 0.00 3.34
2510 2586 0.736636 CGCGATGGTAGAGTGGTACA 59.263 55.000 0.00 0.00 0.00 2.90
2511 2587 1.337071 CGCGATGGTAGAGTGGTACAT 59.663 52.381 0.00 0.00 44.52 2.29
2512 2588 2.223735 CGCGATGGTAGAGTGGTACATT 60.224 50.000 0.00 0.00 44.52 2.71
2513 2589 3.737047 CGCGATGGTAGAGTGGTACATTT 60.737 47.826 0.00 0.00 44.52 2.32
2514 2590 4.498513 CGCGATGGTAGAGTGGTACATTTA 60.499 45.833 0.00 0.00 44.52 1.40
2515 2591 4.743644 GCGATGGTAGAGTGGTACATTTAC 59.256 45.833 0.00 0.00 44.52 2.01
2516 2592 5.451520 GCGATGGTAGAGTGGTACATTTACT 60.452 44.000 0.00 0.00 44.52 2.24
2517 2593 5.977725 CGATGGTAGAGTGGTACATTTACTG 59.022 44.000 0.00 0.00 44.52 2.74
2518 2594 5.080969 TGGTAGAGTGGTACATTTACTGC 57.919 43.478 0.00 0.00 44.52 4.40
2519 2595 4.110482 GGTAGAGTGGTACATTTACTGCG 58.890 47.826 0.00 0.00 44.52 5.18
2520 2596 3.955650 AGAGTGGTACATTTACTGCGT 57.044 42.857 0.00 0.00 44.52 5.24
2521 2597 3.846360 AGAGTGGTACATTTACTGCGTC 58.154 45.455 0.00 0.00 44.52 5.19
2522 2598 2.928116 GAGTGGTACATTTACTGCGTCC 59.072 50.000 0.00 0.00 44.52 4.79
2523 2599 1.657094 GTGGTACATTTACTGCGTCCG 59.343 52.381 0.00 0.00 44.52 4.79
2524 2600 1.283736 GGTACATTTACTGCGTCCGG 58.716 55.000 0.00 0.00 0.00 5.14
2525 2601 1.404583 GGTACATTTACTGCGTCCGGT 60.405 52.381 0.00 0.00 0.00 5.28
2526 2602 1.922545 GTACATTTACTGCGTCCGGTC 59.077 52.381 0.00 0.00 0.00 4.79
2527 2603 0.390735 ACATTTACTGCGTCCGGTCC 60.391 55.000 0.00 0.00 0.00 4.46
2528 2604 1.087771 CATTTACTGCGTCCGGTCCC 61.088 60.000 0.00 0.00 0.00 4.46
2529 2605 1.262640 ATTTACTGCGTCCGGTCCCT 61.263 55.000 0.00 0.00 0.00 4.20
2530 2606 1.474332 TTTACTGCGTCCGGTCCCTT 61.474 55.000 0.00 0.00 0.00 3.95
2531 2607 1.880819 TTACTGCGTCCGGTCCCTTC 61.881 60.000 0.00 0.00 0.00 3.46
2532 2608 4.796231 CTGCGTCCGGTCCCTTCG 62.796 72.222 0.00 0.00 0.00 3.79
2541 2617 3.471806 GTCCCTTCGGCCTCCCTC 61.472 72.222 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 83 2.683968 TCACGCGTCTAATTTTCTGCT 58.316 42.857 9.86 0.00 0.00 4.24
156 159 1.523154 GCAAACAACATCTCCCGCCA 61.523 55.000 0.00 0.00 0.00 5.69
219 223 6.336566 TGTAACAAGACACATGTTGCAAAAT 58.663 32.000 0.00 0.00 45.89 1.82
232 237 9.607988 TCTTCTACAATTTTCTGTAACAAGACA 57.392 29.630 0.00 0.00 31.71 3.41
241 246 8.697507 AAACCTCATCTTCTACAATTTTCTGT 57.302 30.769 0.00 0.00 0.00 3.41
332 337 6.116126 CCGTTCAATCCTCCTCTCTAATTTT 58.884 40.000 0.00 0.00 0.00 1.82
385 411 4.173256 CCATTAATTCCTGAAACAACGGC 58.827 43.478 0.00 0.00 0.00 5.68
409 435 1.000283 CGGATTGATCTCCTTCCTCGG 60.000 57.143 0.00 0.00 32.77 4.63
422 448 1.741401 CTTCTGGCGCACGGATTGA 60.741 57.895 10.83 0.00 33.61 2.57
426 452 1.320344 ATCTACTTCTGGCGCACGGA 61.320 55.000 10.83 6.51 0.00 4.69
470 496 1.370900 CCTCGACGGTCGTTCGTTT 60.371 57.895 27.53 0.00 43.96 3.60
473 499 4.471726 CCCCTCGACGGTCGTTCG 62.472 72.222 27.53 17.30 41.35 3.95
489 515 1.164041 CCCGTATGAAACATCCGCCC 61.164 60.000 0.00 0.00 0.00 6.13
524 550 9.778741 TTCTGATAATAAAATGGAAGACGCTAT 57.221 29.630 0.00 0.00 0.00 2.97
546 572 8.831550 GGCCTAAGATACAAGAAAACTATTCTG 58.168 37.037 0.00 0.00 0.00 3.02
548 574 8.966069 AGGCCTAAGATACAAGAAAACTATTC 57.034 34.615 1.29 0.00 0.00 1.75
549 575 9.755122 AAAGGCCTAAGATACAAGAAAACTATT 57.245 29.630 5.16 0.00 0.00 1.73
550 576 9.755122 AAAAGGCCTAAGATACAAGAAAACTAT 57.245 29.630 5.16 0.00 0.00 2.12
558 584 6.239036 GCCCAATAAAAGGCCTAAGATACAAG 60.239 42.308 5.16 0.00 43.76 3.16
560 586 5.137551 GCCCAATAAAAGGCCTAAGATACA 58.862 41.667 5.16 0.00 43.76 2.29
579 605 2.669569 GCGCAAGAGTCAAGCCCA 60.670 61.111 0.30 0.00 43.02 5.36
636 662 3.291101 TACAGCACGAACCGAGCCC 62.291 63.158 5.26 0.00 43.78 5.19
654 680 2.367377 TATGAGCAGCCCAGCCCT 60.367 61.111 0.00 0.00 34.23 5.19
677 703 2.209273 GGTGGATTGTTGTGGTTTTGC 58.791 47.619 0.00 0.00 0.00 3.68
699 725 0.029567 GGACGAGAGCATGGACGTAG 59.970 60.000 0.00 0.00 39.04 3.51
703 729 0.103208 AATCGGACGAGAGCATGGAC 59.897 55.000 0.00 0.00 0.00 4.02
728 754 3.773370 TCCGTGTGACAGGGAGAC 58.227 61.111 21.87 0.00 42.45 3.36
732 758 2.509336 GCGATCCGTGTGACAGGG 60.509 66.667 17.70 17.70 40.34 4.45
736 762 2.100631 CCTTGGCGATCCGTGTGAC 61.101 63.158 0.00 0.00 34.14 3.67
773 799 2.443394 CGGCTAAGGGGCTGATGGA 61.443 63.158 0.00 0.00 40.74 3.41
780 806 4.971125 CGCTAGCGGCTAAGGGGC 62.971 72.222 29.29 9.73 39.13 5.80
795 821 2.202797 TGCTTCGATCTGGAGCGC 60.203 61.111 0.00 0.00 40.42 5.92
825 851 3.126528 CCCCGGACGAGTATGGAC 58.873 66.667 0.73 0.00 0.00 4.02
1063 1097 0.458716 GAGACGGCCTTCTTCTTCGG 60.459 60.000 13.82 0.00 0.00 4.30
1064 1098 0.798771 CGAGACGGCCTTCTTCTTCG 60.799 60.000 13.82 8.63 0.00 3.79
1065 1099 1.079317 GCGAGACGGCCTTCTTCTTC 61.079 60.000 13.82 0.00 0.00 2.87
1252 1298 3.695830 AGGTAAAACAGAGGCGAATCA 57.304 42.857 0.00 0.00 0.00 2.57
1588 1644 1.981495 ACAAACAGAGAAGAGGGAGGG 59.019 52.381 0.00 0.00 0.00 4.30
1589 1645 2.903135 AGACAAACAGAGAAGAGGGAGG 59.097 50.000 0.00 0.00 0.00 4.30
1597 1653 4.038522 CCAGACAGAGAGACAAACAGAGAA 59.961 45.833 0.00 0.00 0.00 2.87
1608 1664 1.971357 GGTTGAACCCAGACAGAGAGA 59.029 52.381 2.08 0.00 30.04 3.10
1609 1665 1.337260 CGGTTGAACCCAGACAGAGAG 60.337 57.143 9.08 0.00 33.75 3.20
1619 1675 1.570967 GTGCGTTACGGTTGAACCC 59.429 57.895 9.08 0.00 33.75 4.11
1646 1704 2.723271 GCAACGACGACGACGACA 60.723 61.111 25.15 0.00 42.66 4.35
1652 1717 2.094539 CATGCAGCAACGACGACG 59.905 61.111 5.58 5.58 45.75 5.12
1672 1737 1.605710 CAATCGATCCATGGCAAGGAC 59.394 52.381 14.55 7.37 38.13 3.85
1675 1740 1.001706 CAGCAATCGATCCATGGCAAG 60.002 52.381 6.96 0.00 0.00 4.01
1679 1744 1.001706 CAAGCAGCAATCGATCCATGG 60.002 52.381 4.97 4.97 0.00 3.66
1704 1769 1.335496 GGAAGCCACGCAAAACAAGTA 59.665 47.619 0.00 0.00 0.00 2.24
1743 1808 5.805994 GTGTTAATCAGGCTACAGAGTACAC 59.194 44.000 0.00 0.00 0.00 2.90
1772 1837 4.860907 ACCTACGCACTTAAACGAACATAG 59.139 41.667 0.00 0.00 0.00 2.23
1800 1869 3.368501 CCTCCCCTCCCTCCCTCA 61.369 72.222 0.00 0.00 0.00 3.86
1801 1870 4.179599 CCCTCCCCTCCCTCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
1816 1886 2.863809 ACAGACATTCACAGTTTCCCC 58.136 47.619 0.00 0.00 0.00 4.81
1891 1961 1.538950 GGGTGCAGCAAAAGAGAGAAG 59.461 52.381 19.06 0.00 0.00 2.85
1892 1962 1.143684 AGGGTGCAGCAAAAGAGAGAA 59.856 47.619 19.06 0.00 0.00 2.87
1893 1963 0.767375 AGGGTGCAGCAAAAGAGAGA 59.233 50.000 19.06 0.00 0.00 3.10
1894 1964 0.879765 CAGGGTGCAGCAAAAGAGAG 59.120 55.000 19.06 0.00 0.00 3.20
1910 1980 2.693069 ACACAAGAAATCGCTCTCAGG 58.307 47.619 0.00 0.00 0.00 3.86
1913 1983 6.456181 CCAGATAAACACAAGAAATCGCTCTC 60.456 42.308 0.00 0.00 0.00 3.20
1917 1987 5.296813 ACCAGATAAACACAAGAAATCGC 57.703 39.130 0.00 0.00 0.00 4.58
1956 2026 1.227205 CCAAAGCCGCAAACAAGCA 60.227 52.632 0.00 0.00 0.00 3.91
1961 2031 0.387565 TTTCCTCCAAAGCCGCAAAC 59.612 50.000 0.00 0.00 0.00 2.93
1970 2040 2.091541 CCGCAATAGCTTTCCTCCAAA 58.908 47.619 0.00 0.00 39.10 3.28
1988 2059 1.754380 TTCCCCTATGATGGACGCCG 61.754 60.000 0.00 0.00 0.00 6.46
1991 2062 3.769739 TCATTTCCCCTATGATGGACG 57.230 47.619 0.00 0.00 0.00 4.79
1993 2064 4.290459 CAGGATCATTTCCCCTATGATGGA 59.710 45.833 3.27 0.00 46.81 3.41
1994 2065 4.043812 ACAGGATCATTTCCCCTATGATGG 59.956 45.833 3.27 0.00 46.81 3.51
1995 2066 5.221986 TGACAGGATCATTTCCCCTATGATG 60.222 44.000 3.27 0.00 46.81 3.07
2001 2077 2.566746 AGTGACAGGATCATTTCCCCT 58.433 47.619 0.00 0.00 46.81 4.79
2006 2082 8.585471 AACATTATCAAGTGACAGGATCATTT 57.415 30.769 0.00 0.00 40.28 2.32
2007 2083 8.585471 AAACATTATCAAGTGACAGGATCATT 57.415 30.769 0.00 0.00 40.28 2.57
2011 2087 7.667219 ACTCAAAACATTATCAAGTGACAGGAT 59.333 33.333 0.00 0.00 0.00 3.24
2016 2092 9.515020 TTGAAACTCAAAACATTATCAAGTGAC 57.485 29.630 0.00 0.00 32.71 3.67
2041 2117 5.914898 ACAAGCTACAAGGTTTTCACTTT 57.085 34.783 0.00 0.00 32.99 2.66
2065 2141 3.521947 AGTATTTTCGGACGGAGGAAG 57.478 47.619 0.00 0.00 0.00 3.46
2066 2142 3.007182 ACAAGTATTTTCGGACGGAGGAA 59.993 43.478 0.00 0.00 0.00 3.36
2067 2143 2.564062 ACAAGTATTTTCGGACGGAGGA 59.436 45.455 0.00 0.00 0.00 3.71
2068 2144 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2069 2145 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2070 2146 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2071 2147 4.436852 CCATTGACAAGTATTTTCGGACGG 60.437 45.833 0.00 0.00 0.00 4.79
2072 2148 4.390603 TCCATTGACAAGTATTTTCGGACG 59.609 41.667 0.00 0.00 0.00 4.79
2073 2149 5.873179 TCCATTGACAAGTATTTTCGGAC 57.127 39.130 0.00 0.00 0.00 4.79
2074 2150 6.765989 CCTATCCATTGACAAGTATTTTCGGA 59.234 38.462 0.00 0.00 0.00 4.55
2075 2151 6.513393 GCCTATCCATTGACAAGTATTTTCGG 60.513 42.308 0.00 0.00 0.00 4.30
2076 2152 6.260936 AGCCTATCCATTGACAAGTATTTTCG 59.739 38.462 0.00 0.00 0.00 3.46
2077 2153 7.420800 CAGCCTATCCATTGACAAGTATTTTC 58.579 38.462 0.00 0.00 0.00 2.29
2078 2154 6.183360 GCAGCCTATCCATTGACAAGTATTTT 60.183 38.462 0.00 0.00 0.00 1.82
2079 2155 5.300286 GCAGCCTATCCATTGACAAGTATTT 59.700 40.000 0.00 0.00 0.00 1.40
2080 2156 4.823989 GCAGCCTATCCATTGACAAGTATT 59.176 41.667 0.00 0.00 0.00 1.89
2081 2157 4.141413 TGCAGCCTATCCATTGACAAGTAT 60.141 41.667 0.00 0.00 0.00 2.12
2082 2158 3.199727 TGCAGCCTATCCATTGACAAGTA 59.800 43.478 0.00 0.00 0.00 2.24
2083 2159 2.025981 TGCAGCCTATCCATTGACAAGT 60.026 45.455 0.00 0.00 0.00 3.16
2084 2160 2.646930 TGCAGCCTATCCATTGACAAG 58.353 47.619 0.00 0.00 0.00 3.16
2085 2161 2.804986 TGCAGCCTATCCATTGACAA 57.195 45.000 0.00 0.00 0.00 3.18
2086 2162 2.804986 TTGCAGCCTATCCATTGACA 57.195 45.000 0.00 0.00 0.00 3.58
2087 2163 4.454728 TTTTTGCAGCCTATCCATTGAC 57.545 40.909 0.00 0.00 0.00 3.18
2088 2164 4.467082 ACATTTTTGCAGCCTATCCATTGA 59.533 37.500 0.00 0.00 0.00 2.57
2089 2165 4.761975 ACATTTTTGCAGCCTATCCATTG 58.238 39.130 0.00 0.00 0.00 2.82
2090 2166 4.467082 TGACATTTTTGCAGCCTATCCATT 59.533 37.500 0.00 0.00 0.00 3.16
2091 2167 4.025360 TGACATTTTTGCAGCCTATCCAT 58.975 39.130 0.00 0.00 0.00 3.41
2092 2168 3.429492 TGACATTTTTGCAGCCTATCCA 58.571 40.909 0.00 0.00 0.00 3.41
2093 2169 3.445096 ACTGACATTTTTGCAGCCTATCC 59.555 43.478 0.00 0.00 33.03 2.59
2094 2170 4.439289 GGACTGACATTTTTGCAGCCTATC 60.439 45.833 0.00 0.00 33.03 2.08
2095 2171 3.445096 GGACTGACATTTTTGCAGCCTAT 59.555 43.478 0.00 0.00 33.03 2.57
2096 2172 2.819608 GGACTGACATTTTTGCAGCCTA 59.180 45.455 0.00 0.00 33.03 3.93
2097 2173 1.615392 GGACTGACATTTTTGCAGCCT 59.385 47.619 0.00 0.00 33.03 4.58
2098 2174 1.615392 AGGACTGACATTTTTGCAGCC 59.385 47.619 0.00 0.00 33.03 4.85
2099 2175 2.294233 TCAGGACTGACATTTTTGCAGC 59.706 45.455 0.00 0.00 34.14 5.25
2100 2176 4.482386 CATCAGGACTGACATTTTTGCAG 58.518 43.478 3.82 0.00 43.11 4.41
2101 2177 3.256383 CCATCAGGACTGACATTTTTGCA 59.744 43.478 3.82 0.00 43.11 4.08
2102 2178 3.841643 CCATCAGGACTGACATTTTTGC 58.158 45.455 3.82 0.00 43.11 3.68
2103 2179 3.508793 AGCCATCAGGACTGACATTTTTG 59.491 43.478 3.82 0.00 43.11 2.44
2104 2180 3.508793 CAGCCATCAGGACTGACATTTTT 59.491 43.478 3.82 0.00 43.11 1.94
2105 2181 3.087031 CAGCCATCAGGACTGACATTTT 58.913 45.455 3.82 0.00 43.11 1.82
2106 2182 2.306805 TCAGCCATCAGGACTGACATTT 59.693 45.455 3.82 0.00 43.11 2.32
2107 2183 1.911357 TCAGCCATCAGGACTGACATT 59.089 47.619 3.82 0.00 43.11 2.71
2108 2184 1.576577 TCAGCCATCAGGACTGACAT 58.423 50.000 3.82 0.00 43.11 3.06
2109 2185 3.071671 TCAGCCATCAGGACTGACA 57.928 52.632 3.82 0.00 43.11 3.58
2111 2187 1.607801 CCGTCAGCCATCAGGACTGA 61.608 60.000 4.26 4.26 42.12 3.41
2112 2188 1.153489 CCGTCAGCCATCAGGACTG 60.153 63.158 0.00 0.00 39.15 3.51
2113 2189 1.305297 TCCGTCAGCCATCAGGACT 60.305 57.895 0.00 0.00 36.89 3.85
2114 2190 1.153549 GTCCGTCAGCCATCAGGAC 60.154 63.158 0.00 0.00 43.55 3.85
2115 2191 2.710902 CGTCCGTCAGCCATCAGGA 61.711 63.158 0.00 0.00 36.89 3.86
2116 2192 2.202797 CGTCCGTCAGCCATCAGG 60.203 66.667 0.00 0.00 38.23 3.86
2117 2193 0.389817 TTTCGTCCGTCAGCCATCAG 60.390 55.000 0.00 0.00 0.00 2.90
2118 2194 0.249120 ATTTCGTCCGTCAGCCATCA 59.751 50.000 0.00 0.00 0.00 3.07
2119 2195 0.931005 GATTTCGTCCGTCAGCCATC 59.069 55.000 0.00 0.00 0.00 3.51
2120 2196 0.249120 TGATTTCGTCCGTCAGCCAT 59.751 50.000 0.00 0.00 0.00 4.40
2121 2197 0.669318 GTGATTTCGTCCGTCAGCCA 60.669 55.000 0.00 0.00 0.00 4.75
2122 2198 0.389948 AGTGATTTCGTCCGTCAGCC 60.390 55.000 0.00 0.00 0.00 4.85
2123 2199 2.273370 TAGTGATTTCGTCCGTCAGC 57.727 50.000 0.00 0.00 0.00 4.26
2124 2200 4.500837 CAGAATAGTGATTTCGTCCGTCAG 59.499 45.833 0.00 0.00 0.00 3.51
2125 2201 4.421058 CAGAATAGTGATTTCGTCCGTCA 58.579 43.478 0.00 0.00 0.00 4.35
2126 2202 3.797256 CCAGAATAGTGATTTCGTCCGTC 59.203 47.826 0.00 0.00 0.00 4.79
2127 2203 3.782046 CCAGAATAGTGATTTCGTCCGT 58.218 45.455 0.00 0.00 0.00 4.69
2128 2204 2.540101 GCCAGAATAGTGATTTCGTCCG 59.460 50.000 0.00 0.00 0.00 4.79
2129 2205 2.872858 GGCCAGAATAGTGATTTCGTCC 59.127 50.000 0.00 0.00 0.00 4.79
2130 2206 3.798202 AGGCCAGAATAGTGATTTCGTC 58.202 45.455 5.01 0.00 0.00 4.20
2131 2207 3.914426 AGGCCAGAATAGTGATTTCGT 57.086 42.857 5.01 0.00 0.00 3.85
2132 2208 5.567138 AAAAGGCCAGAATAGTGATTTCG 57.433 39.130 5.01 0.00 0.00 3.46
2133 2209 8.303876 TGTTAAAAAGGCCAGAATAGTGATTTC 58.696 33.333 5.01 0.00 0.00 2.17
2134 2210 8.189119 TGTTAAAAAGGCCAGAATAGTGATTT 57.811 30.769 5.01 0.00 0.00 2.17
2135 2211 7.775053 TGTTAAAAAGGCCAGAATAGTGATT 57.225 32.000 5.01 0.00 0.00 2.57
2136 2212 7.775053 TTGTTAAAAAGGCCAGAATAGTGAT 57.225 32.000 5.01 0.00 0.00 3.06
2137 2213 7.669722 AGATTGTTAAAAAGGCCAGAATAGTGA 59.330 33.333 5.01 0.00 0.00 3.41
2138 2214 7.830739 AGATTGTTAAAAAGGCCAGAATAGTG 58.169 34.615 5.01 0.00 0.00 2.74
2139 2215 8.422577 AAGATTGTTAAAAAGGCCAGAATAGT 57.577 30.769 5.01 0.00 0.00 2.12
2140 2216 9.143631 CAAAGATTGTTAAAAAGGCCAGAATAG 57.856 33.333 5.01 0.00 0.00 1.73
2141 2217 8.646900 ACAAAGATTGTTAAAAAGGCCAGAATA 58.353 29.630 5.01 0.00 42.22 1.75
2142 2218 7.508687 ACAAAGATTGTTAAAAAGGCCAGAAT 58.491 30.769 5.01 0.00 42.22 2.40
2143 2219 6.883744 ACAAAGATTGTTAAAAAGGCCAGAA 58.116 32.000 5.01 0.00 42.22 3.02
2144 2220 6.097554 TGACAAAGATTGTTAAAAAGGCCAGA 59.902 34.615 5.01 0.00 45.52 3.86
2145 2221 6.200854 GTGACAAAGATTGTTAAAAAGGCCAG 59.799 38.462 5.01 0.00 45.52 4.85
2146 2222 6.045955 GTGACAAAGATTGTTAAAAAGGCCA 58.954 36.000 5.01 0.00 45.52 5.36
2147 2223 6.045955 TGTGACAAAGATTGTTAAAAAGGCC 58.954 36.000 0.00 0.00 45.52 5.19
2148 2224 7.532682 TTGTGACAAAGATTGTTAAAAAGGC 57.467 32.000 0.00 0.00 45.52 4.35
2154 2230 9.868277 AGTTCATTTTGTGACAAAGATTGTTAA 57.132 25.926 10.91 0.00 45.52 2.01
2155 2231 9.868277 AAGTTCATTTTGTGACAAAGATTGTTA 57.132 25.926 10.91 0.00 45.52 2.41
2156 2232 8.658609 CAAGTTCATTTTGTGACAAAGATTGTT 58.341 29.630 10.91 0.27 45.52 2.83
2158 2234 8.323140 GTCAAGTTCATTTTGTGACAAAGATTG 58.677 33.333 10.91 10.28 38.74 2.67
2159 2235 8.034215 TGTCAAGTTCATTTTGTGACAAAGATT 58.966 29.630 10.91 0.00 44.06 2.40
2160 2236 7.546358 TGTCAAGTTCATTTTGTGACAAAGAT 58.454 30.769 10.91 5.56 44.06 2.40
2161 2237 6.918626 TGTCAAGTTCATTTTGTGACAAAGA 58.081 32.000 10.91 3.50 44.06 2.52
2166 2242 7.754069 TTTCATGTCAAGTTCATTTTGTGAC 57.246 32.000 0.00 0.00 39.22 3.67
2167 2243 8.945481 ATTTTCATGTCAAGTTCATTTTGTGA 57.055 26.923 0.00 0.00 34.25 3.58
2194 2270 9.773328 CGTTGCTAAAAGAATCAGATTATGAAA 57.227 29.630 0.00 0.00 42.53 2.69
2195 2271 7.910162 GCGTTGCTAAAAGAATCAGATTATGAA 59.090 33.333 0.00 0.00 42.53 2.57
2196 2272 7.409697 GCGTTGCTAAAAGAATCAGATTATGA 58.590 34.615 0.00 0.00 43.70 2.15
2197 2273 6.634436 GGCGTTGCTAAAAGAATCAGATTATG 59.366 38.462 0.00 0.00 0.00 1.90
2198 2274 6.318648 TGGCGTTGCTAAAAGAATCAGATTAT 59.681 34.615 0.00 0.00 0.00 1.28
2199 2275 5.645929 TGGCGTTGCTAAAAGAATCAGATTA 59.354 36.000 0.00 0.00 0.00 1.75
2200 2276 4.458989 TGGCGTTGCTAAAAGAATCAGATT 59.541 37.500 0.00 0.00 0.00 2.40
2201 2277 4.009675 TGGCGTTGCTAAAAGAATCAGAT 58.990 39.130 0.00 0.00 0.00 2.90
2202 2278 3.188460 GTGGCGTTGCTAAAAGAATCAGA 59.812 43.478 0.00 0.00 0.00 3.27
2203 2279 3.058293 TGTGGCGTTGCTAAAAGAATCAG 60.058 43.478 0.00 0.00 0.00 2.90
2204 2280 2.881513 TGTGGCGTTGCTAAAAGAATCA 59.118 40.909 0.00 0.00 0.00 2.57
2205 2281 3.492313 CTGTGGCGTTGCTAAAAGAATC 58.508 45.455 0.00 0.00 0.00 2.52
2206 2282 2.351738 GCTGTGGCGTTGCTAAAAGAAT 60.352 45.455 0.00 0.00 0.00 2.40
2207 2283 1.001815 GCTGTGGCGTTGCTAAAAGAA 60.002 47.619 0.00 0.00 0.00 2.52
2208 2284 0.591170 GCTGTGGCGTTGCTAAAAGA 59.409 50.000 0.00 0.00 0.00 2.52
2209 2285 0.387239 GGCTGTGGCGTTGCTAAAAG 60.387 55.000 0.00 0.00 39.81 2.27
2210 2286 1.657556 GGCTGTGGCGTTGCTAAAA 59.342 52.632 0.00 0.00 39.81 1.52
2211 2287 2.265182 GGGCTGTGGCGTTGCTAAA 61.265 57.895 0.00 0.00 39.81 1.85
2212 2288 2.671619 GGGCTGTGGCGTTGCTAA 60.672 61.111 0.00 0.00 39.81 3.09
2237 2313 6.497785 TCGGCGTTTTTATATGGAGAAAAA 57.502 33.333 6.85 0.00 34.26 1.94
2238 2314 6.149807 ACTTCGGCGTTTTTATATGGAGAAAA 59.850 34.615 6.85 0.00 0.00 2.29
2239 2315 5.644636 ACTTCGGCGTTTTTATATGGAGAAA 59.355 36.000 6.85 0.00 0.00 2.52
2240 2316 5.180271 ACTTCGGCGTTTTTATATGGAGAA 58.820 37.500 6.85 0.00 0.00 2.87
2241 2317 4.761975 ACTTCGGCGTTTTTATATGGAGA 58.238 39.130 6.85 0.00 0.00 3.71
2242 2318 5.333111 GCTACTTCGGCGTTTTTATATGGAG 60.333 44.000 6.85 0.00 0.00 3.86
2243 2319 4.508861 GCTACTTCGGCGTTTTTATATGGA 59.491 41.667 6.85 0.00 0.00 3.41
2244 2320 4.510340 AGCTACTTCGGCGTTTTTATATGG 59.490 41.667 6.85 0.00 34.52 2.74
2245 2321 5.609696 CGAGCTACTTCGGCGTTTTTATATG 60.610 44.000 6.85 0.00 36.95 1.78
2246 2322 4.443394 CGAGCTACTTCGGCGTTTTTATAT 59.557 41.667 6.85 0.00 36.95 0.86
2247 2323 3.792956 CGAGCTACTTCGGCGTTTTTATA 59.207 43.478 6.85 0.00 36.95 0.98
2248 2324 2.601763 CGAGCTACTTCGGCGTTTTTAT 59.398 45.455 6.85 0.00 36.95 1.40
2249 2325 1.987770 CGAGCTACTTCGGCGTTTTTA 59.012 47.619 6.85 0.00 36.95 1.52
2250 2326 0.788391 CGAGCTACTTCGGCGTTTTT 59.212 50.000 6.85 0.00 36.95 1.94
2251 2327 1.623973 GCGAGCTACTTCGGCGTTTT 61.624 55.000 6.85 0.00 40.79 2.43
2252 2328 2.092882 GCGAGCTACTTCGGCGTTT 61.093 57.895 6.85 0.00 40.79 3.60
2253 2329 2.506438 GCGAGCTACTTCGGCGTT 60.506 61.111 6.85 0.00 40.79 4.84
2254 2330 2.558554 AATGCGAGCTACTTCGGCGT 62.559 55.000 6.85 0.00 40.79 5.68
2255 2331 1.421410 AAATGCGAGCTACTTCGGCG 61.421 55.000 0.00 0.00 40.79 6.46
2256 2332 0.301987 GAAATGCGAGCTACTTCGGC 59.698 55.000 0.00 0.00 40.79 5.54
2257 2333 1.590238 CTGAAATGCGAGCTACTTCGG 59.410 52.381 0.00 0.00 40.79 4.30
2258 2334 2.280183 GTCTGAAATGCGAGCTACTTCG 59.720 50.000 0.00 0.00 43.23 3.79
2259 2335 2.605366 GGTCTGAAATGCGAGCTACTTC 59.395 50.000 0.00 0.00 0.00 3.01
2260 2336 2.622436 GGTCTGAAATGCGAGCTACTT 58.378 47.619 0.00 0.00 0.00 2.24
2261 2337 1.134670 GGGTCTGAAATGCGAGCTACT 60.135 52.381 0.00 0.00 0.00 2.57
2262 2338 1.291132 GGGTCTGAAATGCGAGCTAC 58.709 55.000 0.00 0.00 0.00 3.58
2263 2339 0.901827 TGGGTCTGAAATGCGAGCTA 59.098 50.000 0.00 0.00 0.00 3.32
2264 2340 0.674895 GTGGGTCTGAAATGCGAGCT 60.675 55.000 0.00 0.00 0.00 4.09
2265 2341 0.955428 TGTGGGTCTGAAATGCGAGC 60.955 55.000 0.00 0.00 0.00 5.03
2266 2342 1.742761 ATGTGGGTCTGAAATGCGAG 58.257 50.000 0.00 0.00 0.00 5.03
2267 2343 2.627945 GTATGTGGGTCTGAAATGCGA 58.372 47.619 0.00 0.00 0.00 5.10
2268 2344 1.327460 CGTATGTGGGTCTGAAATGCG 59.673 52.381 0.00 0.00 0.00 4.73
2269 2345 2.627945 TCGTATGTGGGTCTGAAATGC 58.372 47.619 0.00 0.00 0.00 3.56
2270 2346 3.062099 CGTTCGTATGTGGGTCTGAAATG 59.938 47.826 0.00 0.00 0.00 2.32
2271 2347 3.259064 CGTTCGTATGTGGGTCTGAAAT 58.741 45.455 0.00 0.00 0.00 2.17
2272 2348 2.679450 CGTTCGTATGTGGGTCTGAAA 58.321 47.619 0.00 0.00 0.00 2.69
2273 2349 1.670674 GCGTTCGTATGTGGGTCTGAA 60.671 52.381 0.00 0.00 0.00 3.02
2274 2350 0.108992 GCGTTCGTATGTGGGTCTGA 60.109 55.000 0.00 0.00 0.00 3.27
2275 2351 1.082117 GGCGTTCGTATGTGGGTCTG 61.082 60.000 0.00 0.00 0.00 3.51
2276 2352 1.217244 GGCGTTCGTATGTGGGTCT 59.783 57.895 0.00 0.00 0.00 3.85
2277 2353 0.671163 TTGGCGTTCGTATGTGGGTC 60.671 55.000 0.00 0.00 0.00 4.46
2278 2354 0.672401 CTTGGCGTTCGTATGTGGGT 60.672 55.000 0.00 0.00 0.00 4.51
2279 2355 1.977594 GCTTGGCGTTCGTATGTGGG 61.978 60.000 0.00 0.00 0.00 4.61
2280 2356 1.019278 AGCTTGGCGTTCGTATGTGG 61.019 55.000 0.00 0.00 0.00 4.17
2281 2357 1.588404 CTAGCTTGGCGTTCGTATGTG 59.412 52.381 0.00 0.00 0.00 3.21
2282 2358 1.922570 CTAGCTTGGCGTTCGTATGT 58.077 50.000 0.00 0.00 0.00 2.29
2283 2359 0.577269 GCTAGCTTGGCGTTCGTATG 59.423 55.000 7.70 0.00 0.00 2.39
2284 2360 0.460311 AGCTAGCTTGGCGTTCGTAT 59.540 50.000 12.68 0.00 34.52 3.06
2285 2361 0.179145 GAGCTAGCTTGGCGTTCGTA 60.179 55.000 20.42 0.00 34.52 3.43
2286 2362 1.446272 GAGCTAGCTTGGCGTTCGT 60.446 57.895 20.42 0.00 34.52 3.85
2287 2363 2.167861 GGAGCTAGCTTGGCGTTCG 61.168 63.158 20.42 0.00 34.52 3.95
2288 2364 1.079127 TGGAGCTAGCTTGGCGTTC 60.079 57.895 20.42 3.84 34.52 3.95
2289 2365 1.376037 GTGGAGCTAGCTTGGCGTT 60.376 57.895 20.42 0.00 34.52 4.84
2290 2366 1.903877 ATGTGGAGCTAGCTTGGCGT 61.904 55.000 20.42 10.15 34.52 5.68
2291 2367 0.104855 TATGTGGAGCTAGCTTGGCG 59.895 55.000 20.42 0.00 34.52 5.69
2292 2368 1.587547 GTATGTGGAGCTAGCTTGGC 58.412 55.000 20.42 12.05 0.00 4.52
2293 2369 1.409064 TCGTATGTGGAGCTAGCTTGG 59.591 52.381 20.42 2.65 0.00 3.61
2294 2370 2.860735 GTTCGTATGTGGAGCTAGCTTG 59.139 50.000 20.42 0.00 0.00 4.01
2295 2371 2.479730 CGTTCGTATGTGGAGCTAGCTT 60.480 50.000 20.42 4.72 0.00 3.74
2296 2372 1.065701 CGTTCGTATGTGGAGCTAGCT 59.934 52.381 19.45 19.45 0.00 3.32
2297 2373 1.478137 CGTTCGTATGTGGAGCTAGC 58.522 55.000 6.62 6.62 0.00 3.42
2298 2374 1.478137 GCGTTCGTATGTGGAGCTAG 58.522 55.000 0.00 0.00 0.00 3.42
2299 2375 0.101759 GGCGTTCGTATGTGGAGCTA 59.898 55.000 0.00 0.00 0.00 3.32
2300 2376 1.153628 GGCGTTCGTATGTGGAGCT 60.154 57.895 0.00 0.00 0.00 4.09
2301 2377 1.017177 TTGGCGTTCGTATGTGGAGC 61.017 55.000 0.00 0.00 0.00 4.70
2302 2378 0.999406 CTTGGCGTTCGTATGTGGAG 59.001 55.000 0.00 0.00 0.00 3.86
2303 2379 1.017177 GCTTGGCGTTCGTATGTGGA 61.017 55.000 0.00 0.00 0.00 4.02
2304 2380 1.019278 AGCTTGGCGTTCGTATGTGG 61.019 55.000 0.00 0.00 0.00 4.17
2305 2381 1.588404 CTAGCTTGGCGTTCGTATGTG 59.412 52.381 0.00 0.00 0.00 3.21
2306 2382 1.922570 CTAGCTTGGCGTTCGTATGT 58.077 50.000 0.00 0.00 0.00 2.29
2307 2383 0.577269 GCTAGCTTGGCGTTCGTATG 59.423 55.000 7.70 0.00 0.00 2.39
2308 2384 0.460311 AGCTAGCTTGGCGTTCGTAT 59.540 50.000 12.68 0.00 34.52 3.06
2309 2385 1.065102 CTAGCTAGCTTGGCGTTCGTA 59.935 52.381 24.88 0.00 34.52 3.43
2310 2386 0.179134 CTAGCTAGCTTGGCGTTCGT 60.179 55.000 24.88 0.00 34.52 3.85
2311 2387 1.483424 GCTAGCTAGCTTGGCGTTCG 61.483 60.000 33.71 1.21 45.62 3.95
2312 2388 1.483424 CGCTAGCTAGCTTGGCGTTC 61.483 60.000 35.27 18.18 46.85 3.95
2313 2389 1.519455 CGCTAGCTAGCTTGGCGTT 60.519 57.895 35.27 14.01 46.85 4.84
2314 2390 2.105128 CGCTAGCTAGCTTGGCGT 59.895 61.111 35.27 14.62 46.85 5.68
2315 2391 3.333969 GCGCTAGCTAGCTTGGCG 61.334 66.667 37.32 37.32 46.85 5.69
2325 2401 4.143333 TGGGTCGGAAGCGCTAGC 62.143 66.667 12.05 4.06 45.58 3.42
2326 2402 2.202756 GTGGGTCGGAAGCGCTAG 60.203 66.667 12.05 5.62 0.00 3.42
2327 2403 2.355986 ATGTGGGTCGGAAGCGCTA 61.356 57.895 12.05 0.00 0.00 4.26
2328 2404 3.706373 ATGTGGGTCGGAAGCGCT 61.706 61.111 2.64 2.64 0.00 5.92
2329 2405 3.499737 CATGTGGGTCGGAAGCGC 61.500 66.667 0.00 0.00 0.00 5.92
2330 2406 2.796483 TTCCATGTGGGTCGGAAGCG 62.796 60.000 0.00 0.00 33.88 4.68
2331 2407 0.608035 TTTCCATGTGGGTCGGAAGC 60.608 55.000 0.00 0.00 39.86 3.86
2332 2408 1.165270 GTTTCCATGTGGGTCGGAAG 58.835 55.000 0.00 0.00 39.86 3.46
2333 2409 0.604243 CGTTTCCATGTGGGTCGGAA 60.604 55.000 0.00 0.00 37.03 4.30
2334 2410 1.004320 CGTTTCCATGTGGGTCGGA 60.004 57.895 0.00 0.00 38.11 4.55
2335 2411 2.686816 GCGTTTCCATGTGGGTCGG 61.687 63.158 0.00 0.00 38.11 4.79
2336 2412 2.686816 GGCGTTTCCATGTGGGTCG 61.687 63.158 0.00 3.64 38.11 4.79
2337 2413 1.175983 TTGGCGTTTCCATGTGGGTC 61.176 55.000 0.00 0.00 46.04 4.46
2338 2414 1.152652 TTGGCGTTTCCATGTGGGT 60.153 52.632 0.00 0.00 46.04 4.51
2339 2415 1.586028 CTTGGCGTTTCCATGTGGG 59.414 57.895 0.00 0.00 46.04 4.61
2340 2416 1.080569 GCTTGGCGTTTCCATGTGG 60.081 57.895 0.00 0.00 46.04 4.17
2341 2417 0.664166 GTGCTTGGCGTTTCCATGTG 60.664 55.000 0.00 0.00 46.04 3.21
2342 2418 1.659794 GTGCTTGGCGTTTCCATGT 59.340 52.632 0.00 0.00 46.04 3.21
2343 2419 1.442520 CGTGCTTGGCGTTTCCATG 60.443 57.895 0.00 0.00 46.04 3.66
2344 2420 1.896660 ACGTGCTTGGCGTTTCCAT 60.897 52.632 0.00 0.00 46.04 3.41
2345 2421 2.515057 ACGTGCTTGGCGTTTCCA 60.515 55.556 0.00 0.00 44.85 3.53
2367 2443 2.602933 GCGTTTAGGTTTGGACGGAAAC 60.603 50.000 0.00 0.00 36.14 2.78
2368 2444 1.603326 GCGTTTAGGTTTGGACGGAAA 59.397 47.619 0.00 0.00 36.14 3.13
2369 2445 1.228533 GCGTTTAGGTTTGGACGGAA 58.771 50.000 0.00 0.00 36.14 4.30
2370 2446 0.603439 GGCGTTTAGGTTTGGACGGA 60.603 55.000 0.00 0.00 36.14 4.69
2371 2447 0.885596 TGGCGTTTAGGTTTGGACGG 60.886 55.000 0.00 0.00 36.14 4.79
2372 2448 1.135803 CATGGCGTTTAGGTTTGGACG 60.136 52.381 0.00 0.00 38.45 4.79
2373 2449 2.156098 TCATGGCGTTTAGGTTTGGAC 58.844 47.619 0.00 0.00 0.00 4.02
2374 2450 2.570415 TCATGGCGTTTAGGTTTGGA 57.430 45.000 0.00 0.00 0.00 3.53
2375 2451 2.752354 TGATCATGGCGTTTAGGTTTGG 59.248 45.455 0.00 0.00 0.00 3.28
2376 2452 4.637483 ATGATCATGGCGTTTAGGTTTG 57.363 40.909 7.59 0.00 0.00 2.93
2377 2453 4.142182 CCAATGATCATGGCGTTTAGGTTT 60.142 41.667 9.46 0.00 0.00 3.27
2378 2454 3.381272 CCAATGATCATGGCGTTTAGGTT 59.619 43.478 9.46 0.00 0.00 3.50
2379 2455 2.951642 CCAATGATCATGGCGTTTAGGT 59.048 45.455 9.46 0.00 0.00 3.08
2380 2456 3.631145 CCAATGATCATGGCGTTTAGG 57.369 47.619 9.46 0.00 0.00 2.69
2388 2464 2.945447 ACAAACGCCAATGATCATGG 57.055 45.000 9.46 13.48 41.08 3.66
2389 2465 3.181498 TGCTACAAACGCCAATGATCATG 60.181 43.478 9.46 3.68 0.00 3.07
2390 2466 3.016031 TGCTACAAACGCCAATGATCAT 58.984 40.909 1.18 1.18 0.00 2.45
2391 2467 2.161410 GTGCTACAAACGCCAATGATCA 59.839 45.455 0.00 0.00 0.00 2.92
2392 2468 2.477863 GGTGCTACAAACGCCAATGATC 60.478 50.000 0.00 0.00 37.64 2.92
2393 2469 1.472480 GGTGCTACAAACGCCAATGAT 59.528 47.619 0.00 0.00 37.64 2.45
2394 2470 0.878416 GGTGCTACAAACGCCAATGA 59.122 50.000 0.00 0.00 37.64 2.57
2395 2471 0.595588 TGGTGCTACAAACGCCAATG 59.404 50.000 0.00 0.00 44.46 2.82
2396 2472 3.028916 TGGTGCTACAAACGCCAAT 57.971 47.368 0.00 0.00 44.46 3.16
2397 2473 4.561452 TGGTGCTACAAACGCCAA 57.439 50.000 0.00 0.00 44.46 4.52
2398 2474 1.448922 GGTTGGTGCTACAAACGCCA 61.449 55.000 0.00 0.00 45.70 5.69
2399 2475 1.170290 AGGTTGGTGCTACAAACGCC 61.170 55.000 3.86 0.00 42.75 5.68
2400 2476 1.515081 TAGGTTGGTGCTACAAACGC 58.485 50.000 3.86 0.00 42.75 4.84
2401 2477 5.866335 TTTATAGGTTGGTGCTACAAACG 57.134 39.130 3.86 0.00 42.75 3.60
2402 2478 6.457799 CCGATTTATAGGTTGGTGCTACAAAC 60.458 42.308 1.41 1.41 38.32 2.93
2403 2479 5.587043 CCGATTTATAGGTTGGTGCTACAAA 59.413 40.000 0.00 0.00 31.17 2.83
2404 2480 5.104859 TCCGATTTATAGGTTGGTGCTACAA 60.105 40.000 0.00 0.00 0.00 2.41
2405 2481 4.406326 TCCGATTTATAGGTTGGTGCTACA 59.594 41.667 0.00 0.00 0.00 2.74
2406 2482 4.952460 TCCGATTTATAGGTTGGTGCTAC 58.048 43.478 0.00 0.00 0.00 3.58
2407 2483 4.652421 ACTCCGATTTATAGGTTGGTGCTA 59.348 41.667 0.00 0.00 0.00 3.49
2408 2484 3.454812 ACTCCGATTTATAGGTTGGTGCT 59.545 43.478 0.00 0.00 0.00 4.40
2409 2485 3.560068 CACTCCGATTTATAGGTTGGTGC 59.440 47.826 0.00 0.00 0.00 5.01
2410 2486 4.127171 CCACTCCGATTTATAGGTTGGTG 58.873 47.826 0.00 0.00 31.50 4.17
2411 2487 3.778629 ACCACTCCGATTTATAGGTTGGT 59.221 43.478 10.10 10.10 38.92 3.67
2412 2488 4.417426 ACCACTCCGATTTATAGGTTGG 57.583 45.455 9.22 9.22 37.60 3.77
2413 2489 6.040616 ACTCTACCACTCCGATTTATAGGTTG 59.959 42.308 0.00 0.00 0.00 3.77
2414 2490 6.134754 ACTCTACCACTCCGATTTATAGGTT 58.865 40.000 0.00 0.00 0.00 3.50
2415 2491 5.703310 ACTCTACCACTCCGATTTATAGGT 58.297 41.667 0.00 0.00 0.00 3.08
2416 2492 5.106634 CGACTCTACCACTCCGATTTATAGG 60.107 48.000 0.00 0.00 0.00 2.57
2417 2493 5.469421 ACGACTCTACCACTCCGATTTATAG 59.531 44.000 0.00 0.00 0.00 1.31
2418 2494 5.371526 ACGACTCTACCACTCCGATTTATA 58.628 41.667 0.00 0.00 0.00 0.98
2419 2495 4.205587 ACGACTCTACCACTCCGATTTAT 58.794 43.478 0.00 0.00 0.00 1.40
2420 2496 3.614092 ACGACTCTACCACTCCGATTTA 58.386 45.455 0.00 0.00 0.00 1.40
2421 2497 2.444421 ACGACTCTACCACTCCGATTT 58.556 47.619 0.00 0.00 0.00 2.17
2422 2498 2.125773 ACGACTCTACCACTCCGATT 57.874 50.000 0.00 0.00 0.00 3.34
2423 2499 2.170187 ACTACGACTCTACCACTCCGAT 59.830 50.000 0.00 0.00 0.00 4.18
2424 2500 1.552337 ACTACGACTCTACCACTCCGA 59.448 52.381 0.00 0.00 0.00 4.55
2425 2501 1.932511 GACTACGACTCTACCACTCCG 59.067 57.143 0.00 0.00 0.00 4.63
2426 2502 1.932511 CGACTACGACTCTACCACTCC 59.067 57.143 0.00 0.00 42.66 3.85
2427 2503 2.615869 ACGACTACGACTCTACCACTC 58.384 52.381 0.00 0.00 42.66 3.51
2428 2504 2.758736 ACGACTACGACTCTACCACT 57.241 50.000 0.00 0.00 42.66 4.00
2429 2505 2.863137 CCTACGACTACGACTCTACCAC 59.137 54.545 0.00 0.00 42.66 4.16
2430 2506 2.760650 TCCTACGACTACGACTCTACCA 59.239 50.000 0.00 0.00 42.66 3.25
2431 2507 3.067461 TCTCCTACGACTACGACTCTACC 59.933 52.174 0.00 0.00 42.66 3.18
2432 2508 4.290155 CTCTCCTACGACTACGACTCTAC 58.710 52.174 0.00 0.00 42.66 2.59
2433 2509 3.317711 CCTCTCCTACGACTACGACTCTA 59.682 52.174 0.00 0.00 42.66 2.43
2434 2510 2.101249 CCTCTCCTACGACTACGACTCT 59.899 54.545 0.00 0.00 42.66 3.24
2435 2511 2.159114 ACCTCTCCTACGACTACGACTC 60.159 54.545 0.00 0.00 42.66 3.36
2436 2512 1.830477 ACCTCTCCTACGACTACGACT 59.170 52.381 0.00 0.00 42.66 4.18
2437 2513 2.307934 ACCTCTCCTACGACTACGAC 57.692 55.000 0.00 0.00 42.66 4.34
2438 2514 3.701542 TCTTACCTCTCCTACGACTACGA 59.298 47.826 0.00 0.00 42.66 3.43
2439 2515 4.052159 TCTTACCTCTCCTACGACTACG 57.948 50.000 0.00 0.00 45.75 3.51
2440 2516 6.597280 TCTTTTCTTACCTCTCCTACGACTAC 59.403 42.308 0.00 0.00 0.00 2.73
2441 2517 6.715280 TCTTTTCTTACCTCTCCTACGACTA 58.285 40.000 0.00 0.00 0.00 2.59
2442 2518 5.568392 TCTTTTCTTACCTCTCCTACGACT 58.432 41.667 0.00 0.00 0.00 4.18
2443 2519 5.893897 TCTTTTCTTACCTCTCCTACGAC 57.106 43.478 0.00 0.00 0.00 4.34
2444 2520 5.360144 CCATCTTTTCTTACCTCTCCTACGA 59.640 44.000 0.00 0.00 0.00 3.43
2445 2521 5.452077 CCCATCTTTTCTTACCTCTCCTACG 60.452 48.000 0.00 0.00 0.00 3.51
2446 2522 5.425862 ACCCATCTTTTCTTACCTCTCCTAC 59.574 44.000 0.00 0.00 0.00 3.18
2447 2523 5.600749 ACCCATCTTTTCTTACCTCTCCTA 58.399 41.667 0.00 0.00 0.00 2.94
2448 2524 4.439860 ACCCATCTTTTCTTACCTCTCCT 58.560 43.478 0.00 0.00 0.00 3.69
2449 2525 4.680975 CGACCCATCTTTTCTTACCTCTCC 60.681 50.000 0.00 0.00 0.00 3.71
2450 2526 4.081586 ACGACCCATCTTTTCTTACCTCTC 60.082 45.833 0.00 0.00 0.00 3.20
2451 2527 3.838903 ACGACCCATCTTTTCTTACCTCT 59.161 43.478 0.00 0.00 0.00 3.69
2452 2528 4.203654 ACGACCCATCTTTTCTTACCTC 57.796 45.455 0.00 0.00 0.00 3.85
2453 2529 4.324267 CAACGACCCATCTTTTCTTACCT 58.676 43.478 0.00 0.00 0.00 3.08
2454 2530 3.119955 GCAACGACCCATCTTTTCTTACC 60.120 47.826 0.00 0.00 0.00 2.85
2455 2531 3.500680 TGCAACGACCCATCTTTTCTTAC 59.499 43.478 0.00 0.00 0.00 2.34
2456 2532 3.745799 TGCAACGACCCATCTTTTCTTA 58.254 40.909 0.00 0.00 0.00 2.10
2457 2533 2.582052 TGCAACGACCCATCTTTTCTT 58.418 42.857 0.00 0.00 0.00 2.52
2458 2534 2.270352 TGCAACGACCCATCTTTTCT 57.730 45.000 0.00 0.00 0.00 2.52
2459 2535 2.415893 CCATGCAACGACCCATCTTTTC 60.416 50.000 0.00 0.00 0.00 2.29
2460 2536 1.545582 CCATGCAACGACCCATCTTTT 59.454 47.619 0.00 0.00 0.00 2.27
2461 2537 1.176527 CCATGCAACGACCCATCTTT 58.823 50.000 0.00 0.00 0.00 2.52
2462 2538 0.327924 TCCATGCAACGACCCATCTT 59.672 50.000 0.00 0.00 0.00 2.40
2463 2539 0.107508 CTCCATGCAACGACCCATCT 60.108 55.000 0.00 0.00 0.00 2.90
2464 2540 1.097547 CCTCCATGCAACGACCCATC 61.098 60.000 0.00 0.00 0.00 3.51
2465 2541 1.077501 CCTCCATGCAACGACCCAT 60.078 57.895 0.00 0.00 0.00 4.00
2466 2542 2.350895 CCTCCATGCAACGACCCA 59.649 61.111 0.00 0.00 0.00 4.51
2467 2543 2.438434 CCCTCCATGCAACGACCC 60.438 66.667 0.00 0.00 0.00 4.46
2468 2544 3.134127 GCCCTCCATGCAACGACC 61.134 66.667 0.00 0.00 0.00 4.79
2469 2545 2.045926 AGCCCTCCATGCAACGAC 60.046 61.111 0.00 0.00 0.00 4.34
2470 2546 2.046023 CAGCCCTCCATGCAACGA 60.046 61.111 0.00 0.00 0.00 3.85
2471 2547 3.136123 CCAGCCCTCCATGCAACG 61.136 66.667 0.00 0.00 0.00 4.10
2472 2548 3.455469 GCCAGCCCTCCATGCAAC 61.455 66.667 0.00 0.00 0.00 4.17
2473 2549 3.982111 TGCCAGCCCTCCATGCAA 61.982 61.111 0.00 0.00 0.00 4.08
2474 2550 4.746309 GTGCCAGCCCTCCATGCA 62.746 66.667 0.00 0.00 0.00 3.96
2483 2559 4.830765 TACCATCGCGTGCCAGCC 62.831 66.667 5.77 0.00 0.00 4.85
2484 2560 3.264897 CTACCATCGCGTGCCAGC 61.265 66.667 5.77 0.00 0.00 4.85
2485 2561 1.589993 CTCTACCATCGCGTGCCAG 60.590 63.158 5.77 4.05 0.00 4.85
2486 2562 2.348104 ACTCTACCATCGCGTGCCA 61.348 57.895 5.77 0.00 0.00 4.92
2487 2563 1.878522 CACTCTACCATCGCGTGCC 60.879 63.158 5.77 0.00 0.00 5.01
2488 2564 1.878522 CCACTCTACCATCGCGTGC 60.879 63.158 5.77 0.00 0.00 5.34
2489 2565 0.736636 TACCACTCTACCATCGCGTG 59.263 55.000 5.77 3.64 0.00 5.34
2490 2566 0.737219 GTACCACTCTACCATCGCGT 59.263 55.000 5.77 0.00 0.00 6.01
2491 2567 0.736636 TGTACCACTCTACCATCGCG 59.263 55.000 0.00 0.00 0.00 5.87
2492 2568 3.454371 AATGTACCACTCTACCATCGC 57.546 47.619 0.00 0.00 0.00 4.58
2493 2569 5.977725 CAGTAAATGTACCACTCTACCATCG 59.022 44.000 0.00 0.00 0.00 3.84
2494 2570 5.753921 GCAGTAAATGTACCACTCTACCATC 59.246 44.000 0.00 0.00 0.00 3.51
2495 2571 5.671493 GCAGTAAATGTACCACTCTACCAT 58.329 41.667 0.00 0.00 0.00 3.55
2496 2572 4.381185 CGCAGTAAATGTACCACTCTACCA 60.381 45.833 0.00 0.00 0.00 3.25
2497 2573 4.110482 CGCAGTAAATGTACCACTCTACC 58.890 47.826 0.00 0.00 0.00 3.18
2498 2574 4.741342 ACGCAGTAAATGTACCACTCTAC 58.259 43.478 0.00 0.00 41.94 2.59
2500 2576 3.955650 ACGCAGTAAATGTACCACTCT 57.044 42.857 0.00 0.00 41.94 3.24
2515 2591 4.796231 CGAAGGGACCGGACGCAG 62.796 72.222 21.71 9.65 0.00 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.