Multiple sequence alignment - TraesCS1B01G293100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G293100 chr1B 100.000 3946 0 0 1 3946 510807363 510811308 0.000000e+00 7287.0
1 TraesCS1B01G293100 chr1B 77.232 1120 195 40 1870 2971 509902455 509901378 6.280000e-168 601.0
2 TraesCS1B01G293100 chr1B 100.000 123 0 0 4265 4387 510811627 510811749 1.230000e-55 228.0
3 TraesCS1B01G293100 chr1B 85.714 161 22 1 3658 3817 642605725 642605885 7.550000e-38 169.0
4 TraesCS1B01G293100 chr1D 92.621 3659 165 55 41 3654 381017611 381021209 0.000000e+00 5164.0
5 TraesCS1B01G293100 chr1D 77.659 1119 192 40 1870 2971 379912116 379911039 2.880000e-176 628.0
6 TraesCS1B01G293100 chr1A 90.103 3577 196 65 195 3660 481672629 481676158 0.000000e+00 4499.0
7 TraesCS1B01G293100 chr1A 77.500 1120 192 39 1870 2971 480935277 480934200 6.230000e-173 617.0
8 TraesCS1B01G293100 chr3D 83.567 998 136 18 1982 2971 465027150 465026173 0.000000e+00 909.0
9 TraesCS1B01G293100 chr3D 80.900 1000 156 22 1982 2971 464808955 464807981 0.000000e+00 756.0
10 TraesCS1B01G293100 chr3D 83.204 387 59 5 1471 1854 465027850 465027467 2.510000e-92 350.0
11 TraesCS1B01G293100 chr3D 86.250 160 20 2 3656 3813 564006478 564006319 5.830000e-39 172.0
12 TraesCS1B01G293100 chr3D 93.204 103 7 0 1454 1556 465509266 465509368 7.600000e-33 152.0
13 TraesCS1B01G293100 chr3D 84.211 133 21 0 3107 3239 464807885 464807753 3.560000e-26 130.0
14 TraesCS1B01G293100 chr3A 83.300 1000 135 21 1982 2971 608347363 608346386 0.000000e+00 893.0
15 TraesCS1B01G293100 chr3A 80.320 1001 160 26 1982 2971 608195753 608194779 0.000000e+00 723.0
16 TraesCS1B01G293100 chr3A 82.946 387 60 5 1471 1854 608348068 608347685 1.170000e-90 344.0
17 TraesCS1B01G293100 chr3A 74.510 510 116 12 1472 1974 596794327 596794829 4.450000e-50 209.0
18 TraesCS1B01G293100 chr3A 87.421 159 16 3 3658 3813 522063859 522063702 3.490000e-41 180.0
19 TraesCS1B01G293100 chr3A 85.443 158 20 2 3649 3805 730086969 730086814 1.260000e-35 161.0
20 TraesCS1B01G293100 chr3B 79.518 996 177 18 1982 2971 618155761 618154787 0.000000e+00 684.0
21 TraesCS1B01G293100 chr3B 82.429 387 62 5 1471 1854 618442878 618442495 2.530000e-87 333.0
22 TraesCS1B01G293100 chr3B 74.805 512 111 16 1472 1974 597545462 597545964 9.560000e-52 215.0
23 TraesCS1B01G293100 chr3B 93.069 101 7 0 1454 1554 618869549 618869649 9.830000e-32 148.0
24 TraesCS1B01G293100 chr7D 78.788 990 168 32 1997 2971 149085127 149084165 1.040000e-175 627.0
25 TraesCS1B01G293100 chr7D 78.644 988 173 25 1997 2971 149181910 149182872 4.820000e-174 621.0
26 TraesCS1B01G293100 chr7D 85.294 136 18 2 3107 3241 149084088 149083954 5.920000e-29 139.0
27 TraesCS1B01G293100 chr7B 78.378 999 186 22 1982 2971 111943061 111944038 4.820000e-174 621.0
28 TraesCS1B01G293100 chr4A 76.162 1011 175 44 1982 2971 104410504 104409539 5.140000e-129 472.0
29 TraesCS1B01G293100 chr4A 86.250 160 19 3 3648 3805 319821315 319821473 2.100000e-38 171.0
30 TraesCS1B01G293100 chr4D 75.944 1006 186 35 1982 2971 360451974 360452939 2.390000e-127 466.0
31 TraesCS1B01G293100 chr4B 75.964 1011 177 43 1982 2971 445229989 445230954 1.110000e-125 460.0
32 TraesCS1B01G293100 chr2A 77.883 529 103 11 1453 1974 185264917 185265438 2.550000e-82 316.0
33 TraesCS1B01G293100 chr2A 82.857 140 20 4 3107 3244 185363045 185362908 5.960000e-24 122.0
34 TraesCS1B01G293100 chr5D 86.624 157 18 3 3651 3805 462454808 462454653 2.100000e-38 171.0
35 TraesCS1B01G293100 chr5A 87.248 149 19 0 3656 3804 362159278 362159426 2.100000e-38 171.0
36 TraesCS1B01G293100 chr2D 86.164 159 21 1 3656 3813 8983620 8983462 2.100000e-38 171.0
37 TraesCS1B01G293100 chr2D 83.212 137 19 4 3107 3241 165340682 165340816 5.960000e-24 122.0
38 TraesCS1B01G293100 chr2D 82.143 140 21 4 3107 3244 165483665 165483528 2.770000e-22 117.0
39 TraesCS1B01G293100 chr2B 85.625 160 20 3 3658 3816 4502712 4502869 9.760000e-37 165.0
40 TraesCS1B01G293100 chr2B 85.000 140 17 4 3107 3244 232289643 232289506 5.920000e-29 139.0
41 TraesCS1B01G293100 chr2B 100.000 28 0 0 1313 1340 496080772 496080799 8.000000e-03 52.8
42 TraesCS1B01G293100 chr7A 84.559 136 19 2 3107 3241 149861049 149860915 2.750000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G293100 chr1B 510807363 510811749 4386 False 3757.5 7287 100.0000 1 4387 2 chr1B.!!$F2 4386
1 TraesCS1B01G293100 chr1B 509901378 509902455 1077 True 601.0 601 77.2320 1870 2971 1 chr1B.!!$R1 1101
2 TraesCS1B01G293100 chr1D 381017611 381021209 3598 False 5164.0 5164 92.6210 41 3654 1 chr1D.!!$F1 3613
3 TraesCS1B01G293100 chr1D 379911039 379912116 1077 True 628.0 628 77.6590 1870 2971 1 chr1D.!!$R1 1101
4 TraesCS1B01G293100 chr1A 481672629 481676158 3529 False 4499.0 4499 90.1030 195 3660 1 chr1A.!!$F1 3465
5 TraesCS1B01G293100 chr1A 480934200 480935277 1077 True 617.0 617 77.5000 1870 2971 1 chr1A.!!$R1 1101
6 TraesCS1B01G293100 chr3D 465026173 465027850 1677 True 629.5 909 83.3855 1471 2971 2 chr3D.!!$R3 1500
7 TraesCS1B01G293100 chr3D 464807753 464808955 1202 True 443.0 756 82.5555 1982 3239 2 chr3D.!!$R2 1257
8 TraesCS1B01G293100 chr3A 608194779 608195753 974 True 723.0 723 80.3200 1982 2971 1 chr3A.!!$R2 989
9 TraesCS1B01G293100 chr3A 608346386 608348068 1682 True 618.5 893 83.1230 1471 2971 2 chr3A.!!$R4 1500
10 TraesCS1B01G293100 chr3A 596794327 596794829 502 False 209.0 209 74.5100 1472 1974 1 chr3A.!!$F1 502
11 TraesCS1B01G293100 chr3B 618154787 618155761 974 True 684.0 684 79.5180 1982 2971 1 chr3B.!!$R1 989
12 TraesCS1B01G293100 chr3B 597545462 597545964 502 False 215.0 215 74.8050 1472 1974 1 chr3B.!!$F1 502
13 TraesCS1B01G293100 chr7D 149181910 149182872 962 False 621.0 621 78.6440 1997 2971 1 chr7D.!!$F1 974
14 TraesCS1B01G293100 chr7D 149083954 149085127 1173 True 383.0 627 82.0410 1997 3241 2 chr7D.!!$R1 1244
15 TraesCS1B01G293100 chr7B 111943061 111944038 977 False 621.0 621 78.3780 1982 2971 1 chr7B.!!$F1 989
16 TraesCS1B01G293100 chr4A 104409539 104410504 965 True 472.0 472 76.1620 1982 2971 1 chr4A.!!$R1 989
17 TraesCS1B01G293100 chr4D 360451974 360452939 965 False 466.0 466 75.9440 1982 2971 1 chr4D.!!$F1 989
18 TraesCS1B01G293100 chr4B 445229989 445230954 965 False 460.0 460 75.9640 1982 2971 1 chr4B.!!$F1 989
19 TraesCS1B01G293100 chr2A 185264917 185265438 521 False 316.0 316 77.8830 1453 1974 1 chr2A.!!$F1 521

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.029300 CAAAGACAACCACTGCCACG 59.971 55.0 0.00 0.0 0.00 4.94 F
443 452 0.108019 GTGGGACGTCTTTCCACCTT 59.892 55.0 24.11 0.0 43.65 3.50 F
519 528 0.179181 TACAGTACGCGCTACAGCAC 60.179 55.0 5.73 0.0 42.21 4.40 F
941 999 0.251077 GGGCCCCACTCATCATCATC 60.251 60.0 12.23 0.0 0.00 2.92 F
942 1000 0.475475 GGCCCCACTCATCATCATCA 59.525 55.0 0.00 0.0 0.00 3.07 F
1211 1297 0.669318 CACGTACATGTGTCCGGCTT 60.669 55.0 9.11 0.0 35.12 4.35 F
2998 3339 0.027848 TTCGCACATACGCATGCATG 59.972 50.0 22.70 22.7 42.17 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1035 1107 1.566211 TGCTAGCTGCTTCCTCTCTT 58.434 50.000 17.23 0.0 43.37 2.85 R
2310 2645 2.192861 CAGGTTCTTGCCGTTGCCA 61.193 57.895 0.00 0.0 36.33 4.92 R
2441 2776 2.926242 GGAACTCCCGGTCCACCA 60.926 66.667 0.00 0.0 35.14 4.17 R
2850 3191 1.447314 CTTGGCCGGGTCGTAGTTC 60.447 63.158 2.18 0.0 0.00 3.01 R
2977 3318 1.648165 GCATGCGTATGTGCGAACG 60.648 57.895 15.13 0.0 41.92 3.95 R
3100 3456 0.258774 AACCAAACACCTGCCAGAGT 59.741 50.000 0.00 0.0 0.00 3.24 R
3883 4279 0.032403 TTTCGCTCGTTCGGGAAGAA 59.968 50.000 0.00 0.0 37.20 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 6.638096 CATCCCTAATAATTGTGATGCACA 57.362 37.500 0.00 0.00 43.02 4.57
28 29 7.223260 CATCCCTAATAATTGTGATGCACAT 57.777 36.000 0.62 0.00 44.16 3.21
29 30 6.638096 TCCCTAATAATTGTGATGCACATG 57.362 37.500 0.62 0.00 44.16 3.21
30 31 6.363882 TCCCTAATAATTGTGATGCACATGA 58.636 36.000 0.00 0.00 44.16 3.07
31 32 7.005902 TCCCTAATAATTGTGATGCACATGAT 58.994 34.615 0.00 0.00 44.16 2.45
32 33 7.506599 TCCCTAATAATTGTGATGCACATGATT 59.493 33.333 0.00 2.51 44.16 2.57
33 34 8.795513 CCCTAATAATTGTGATGCACATGATTA 58.204 33.333 0.00 4.51 44.16 1.75
76 77 3.877508 AGTAGAACAAAGACAACCACTGC 59.122 43.478 0.00 0.00 0.00 4.40
78 79 1.748493 GAACAAAGACAACCACTGCCA 59.252 47.619 0.00 0.00 0.00 4.92
79 80 1.102978 ACAAAGACAACCACTGCCAC 58.897 50.000 0.00 0.00 0.00 5.01
80 81 0.029300 CAAAGACAACCACTGCCACG 59.971 55.000 0.00 0.00 0.00 4.94
84 85 2.985282 CAACCACTGCCACGCCAT 60.985 61.111 0.00 0.00 0.00 4.40
91 92 1.137404 CTGCCACGCCATTACAAGC 59.863 57.895 0.00 0.00 0.00 4.01
110 111 7.916914 ACAAGCTATGAAATTAACGGTTACT 57.083 32.000 0.00 0.00 0.00 2.24
119 120 7.889469 TGAAATTAACGGTTACTACTGAGTCT 58.111 34.615 0.00 0.00 37.10 3.24
130 131 7.094848 GGTTACTACTGAGTCTACTTCTTTCGT 60.095 40.741 0.00 0.00 37.10 3.85
139 140 4.687948 GTCTACTTCTTTCGTAACAACCCC 59.312 45.833 0.00 0.00 0.00 4.95
149 150 5.294734 TCGTAACAACCCCTTTAAGAAGT 57.705 39.130 0.00 0.00 0.00 3.01
157 158 8.122472 ACAACCCCTTTAAGAAGTGATAAATG 57.878 34.615 0.00 0.00 0.00 2.32
161 162 6.321435 CCCCTTTAAGAAGTGATAAATGTCCC 59.679 42.308 0.00 0.00 0.00 4.46
165 166 7.880160 TTAAGAAGTGATAAATGTCCCCATG 57.120 36.000 0.00 0.00 0.00 3.66
176 177 1.077787 TCCCCATGTCATCGTTGCC 60.078 57.895 0.00 0.00 0.00 4.52
177 178 1.378382 CCCCATGTCATCGTTGCCA 60.378 57.895 0.00 0.00 0.00 4.92
178 179 0.752743 CCCCATGTCATCGTTGCCAT 60.753 55.000 0.00 0.00 0.00 4.40
179 180 0.382873 CCCATGTCATCGTTGCCATG 59.617 55.000 9.90 9.90 0.00 3.66
180 181 1.097232 CCATGTCATCGTTGCCATGT 58.903 50.000 14.41 0.00 0.00 3.21
181 182 1.064505 CCATGTCATCGTTGCCATGTC 59.935 52.381 14.41 0.00 0.00 3.06
182 183 2.011947 CATGTCATCGTTGCCATGTCT 58.988 47.619 8.89 0.00 0.00 3.41
183 184 1.441738 TGTCATCGTTGCCATGTCTG 58.558 50.000 0.00 0.00 0.00 3.51
184 185 1.001860 TGTCATCGTTGCCATGTCTGA 59.998 47.619 0.00 0.00 0.00 3.27
185 186 2.283298 GTCATCGTTGCCATGTCTGAT 58.717 47.619 0.00 0.00 0.00 2.90
186 187 2.286294 GTCATCGTTGCCATGTCTGATC 59.714 50.000 0.00 0.00 0.00 2.92
187 188 1.259770 CATCGTTGCCATGTCTGATCG 59.740 52.381 0.00 0.00 0.00 3.69
188 189 0.460109 TCGTTGCCATGTCTGATCGG 60.460 55.000 0.00 0.00 0.00 4.18
189 190 0.460109 CGTTGCCATGTCTGATCGGA 60.460 55.000 0.00 0.00 0.00 4.55
190 191 1.293924 GTTGCCATGTCTGATCGGAG 58.706 55.000 3.91 0.00 0.00 4.63
191 192 1.134699 GTTGCCATGTCTGATCGGAGA 60.135 52.381 3.91 3.69 45.75 3.71
192 193 0.461548 TGCCATGTCTGATCGGAGAC 59.538 55.000 3.91 5.34 42.51 3.36
207 208 1.336980 GGAGACGGTCTGGACAAGAAC 60.337 57.143 16.72 0.00 39.47 3.01
208 209 1.340248 GAGACGGTCTGGACAAGAACA 59.660 52.381 16.72 0.00 43.49 3.18
217 218 5.355350 GGTCTGGACAAGAACATTTATCCTG 59.645 44.000 3.10 0.00 42.76 3.86
222 223 9.347240 CTGGACAAGAACATTTATCCTGATTAT 57.653 33.333 0.00 0.00 0.00 1.28
229 230 9.265901 AGAACATTTATCCTGATTATCAAGACG 57.734 33.333 0.00 0.00 0.00 4.18
307 311 2.048444 TGTATTCGTCCCTAGCGACT 57.952 50.000 6.01 0.00 38.14 4.18
308 312 2.372264 TGTATTCGTCCCTAGCGACTT 58.628 47.619 6.01 0.00 38.14 3.01
352 356 3.443145 AATTGGTAACCCCGACATGAA 57.557 42.857 0.00 0.00 35.15 2.57
442 451 1.752833 GTGGGACGTCTTTCCACCT 59.247 57.895 24.11 0.00 43.65 4.00
443 452 0.108019 GTGGGACGTCTTTCCACCTT 59.892 55.000 24.11 0.00 43.65 3.50
444 453 1.345415 GTGGGACGTCTTTCCACCTTA 59.655 52.381 24.11 0.00 43.65 2.69
445 454 2.048601 TGGGACGTCTTTCCACCTTAA 58.951 47.619 16.46 0.00 37.40 1.85
489 498 7.380602 CGGGAGATGAATTTCTGCATTTAATTC 59.619 37.037 15.77 15.77 38.27 2.17
499 508 6.222038 TCTGCATTTAATTCTCGTCCTACT 57.778 37.500 0.00 0.00 0.00 2.57
515 524 2.352651 CCTACTTACAGTACGCGCTACA 59.647 50.000 5.73 0.00 0.00 2.74
516 525 2.539346 ACTTACAGTACGCGCTACAG 57.461 50.000 5.73 7.81 0.00 2.74
519 528 0.179181 TACAGTACGCGCTACAGCAC 60.179 55.000 5.73 0.00 42.21 4.40
520 529 1.443702 CAGTACGCGCTACAGCACA 60.444 57.895 5.73 0.00 42.21 4.57
670 695 3.003378 GTCTTAAACAACAGGACACAGCC 59.997 47.826 0.00 0.00 0.00 4.85
675 700 1.635487 ACAACAGGACACAGCCCATAT 59.365 47.619 0.00 0.00 0.00 1.78
828 865 1.725164 CCATGCTCGTCATCATCATCG 59.275 52.381 0.00 0.00 31.79 3.84
834 892 1.002792 TCGTCATCATCATCGTCGTCC 60.003 52.381 0.00 0.00 0.00 4.79
857 915 5.085636 TCGTCGTAAATCCAAACACAAAG 57.914 39.130 0.00 0.00 0.00 2.77
894 952 5.166398 ACGATCGAAAGTAACTAAACAGGG 58.834 41.667 24.34 0.00 0.00 4.45
909 967 2.657143 ACAGGGCCGAAAACAAAAGTA 58.343 42.857 0.00 0.00 0.00 2.24
938 996 0.466922 CTTGGGCCCCACTCATCATC 60.467 60.000 22.27 0.00 30.78 2.92
939 997 1.213619 TTGGGCCCCACTCATCATCA 61.214 55.000 22.27 0.00 30.78 3.07
940 998 0.995132 TGGGCCCCACTCATCATCAT 60.995 55.000 22.27 0.00 0.00 2.45
941 999 0.251077 GGGCCCCACTCATCATCATC 60.251 60.000 12.23 0.00 0.00 2.92
942 1000 0.475475 GGCCCCACTCATCATCATCA 59.525 55.000 0.00 0.00 0.00 3.07
943 1001 1.075050 GGCCCCACTCATCATCATCAT 59.925 52.381 0.00 0.00 0.00 2.45
1089 1163 2.103340 GCCGTCTCTTCTCCTCGC 59.897 66.667 0.00 0.00 0.00 5.03
1211 1297 0.669318 CACGTACATGTGTCCGGCTT 60.669 55.000 9.11 0.00 35.12 4.35
1213 1299 1.410737 CGTACATGTGTCCGGCTTCG 61.411 60.000 9.11 0.00 0.00 3.79
1225 1311 6.201425 TGTGTCCGGCTTCGTTAATTATTATC 59.799 38.462 0.00 0.00 0.00 1.75
1226 1312 5.403166 TGTCCGGCTTCGTTAATTATTATCG 59.597 40.000 0.00 8.60 0.00 2.92
1276 1386 7.448469 ACCACAGTAGTTGATTTTTAGATTGCT 59.552 33.333 0.00 0.00 0.00 3.91
1277 1387 8.946085 CCACAGTAGTTGATTTTTAGATTGCTA 58.054 33.333 0.00 0.00 0.00 3.49
1343 1453 1.579698 ATGAATAGCACTGCTCTGCG 58.420 50.000 6.86 0.00 42.42 5.18
2070 2387 1.303799 ACGAGCTCTTCTTCGCCGTA 61.304 55.000 12.85 0.00 33.55 4.02
2187 2510 4.785453 CTCCTCACCGCCAAGCCC 62.785 72.222 0.00 0.00 0.00 5.19
2265 2600 0.812412 CCTTCGACAACACCACCGTT 60.812 55.000 0.00 0.00 0.00 4.44
2977 3318 1.302271 GACAACCCAGGTCCGTTCC 60.302 63.158 0.00 0.00 0.00 3.62
2982 3323 2.431942 CCAGGTCCGTTCCGTTCG 60.432 66.667 0.00 0.00 0.00 3.95
2983 3324 3.110178 CAGGTCCGTTCCGTTCGC 61.110 66.667 0.00 0.00 0.00 4.70
2984 3325 3.608662 AGGTCCGTTCCGTTCGCA 61.609 61.111 0.00 0.00 0.00 5.10
2985 3326 3.408851 GGTCCGTTCCGTTCGCAC 61.409 66.667 0.00 0.00 0.00 5.34
2986 3327 2.659244 GTCCGTTCCGTTCGCACA 60.659 61.111 0.00 0.00 0.00 4.57
2987 3328 2.025418 GTCCGTTCCGTTCGCACAT 61.025 57.895 0.00 0.00 0.00 3.21
2988 3329 0.733566 GTCCGTTCCGTTCGCACATA 60.734 55.000 0.00 0.00 0.00 2.29
2989 3330 0.733566 TCCGTTCCGTTCGCACATAC 60.734 55.000 0.00 0.00 0.00 2.39
2990 3331 1.339134 CGTTCCGTTCGCACATACG 59.661 57.895 0.00 0.00 37.50 3.06
2991 3332 1.058284 GTTCCGTTCGCACATACGC 59.942 57.895 0.00 0.00 36.49 4.42
2992 3333 1.373121 TTCCGTTCGCACATACGCA 60.373 52.632 0.00 0.00 36.49 5.24
2993 3334 0.738063 TTCCGTTCGCACATACGCAT 60.738 50.000 0.00 0.00 36.49 4.73
2994 3335 1.012343 CCGTTCGCACATACGCATG 60.012 57.895 0.00 0.00 36.49 4.06
2995 3336 1.648165 CGTTCGCACATACGCATGC 60.648 57.895 7.91 7.91 35.39 4.06
2996 3337 1.423450 GTTCGCACATACGCATGCA 59.577 52.632 19.57 0.00 42.17 3.96
2997 3338 0.027979 GTTCGCACATACGCATGCAT 59.972 50.000 19.57 4.54 42.17 3.96
2998 3339 0.027848 TTCGCACATACGCATGCATG 59.972 50.000 22.70 22.70 42.17 4.06
3027 3375 1.704641 ATGCATGCATGGAGCTTCAT 58.295 45.000 31.74 17.26 45.94 2.57
3030 3378 1.681793 GCATGCATGGAGCTTCATTCT 59.318 47.619 27.34 0.00 45.94 2.40
3036 3384 5.195185 TGCATGGAGCTTCATTCTTCATTA 58.805 37.500 4.17 0.00 45.94 1.90
3038 3386 5.975939 GCATGGAGCTTCATTCTTCATTAAC 59.024 40.000 4.17 0.00 41.15 2.01
3039 3387 5.801350 TGGAGCTTCATTCTTCATTAACG 57.199 39.130 0.00 0.00 0.00 3.18
3040 3388 5.245531 TGGAGCTTCATTCTTCATTAACGT 58.754 37.500 0.00 0.00 0.00 3.99
3043 3391 6.312918 GGAGCTTCATTCTTCATTAACGTACA 59.687 38.462 0.00 0.00 0.00 2.90
3045 3393 6.874134 AGCTTCATTCTTCATTAACGTACACT 59.126 34.615 0.00 0.00 0.00 3.55
3046 3394 8.033038 AGCTTCATTCTTCATTAACGTACACTA 58.967 33.333 0.00 0.00 0.00 2.74
3047 3395 8.818057 GCTTCATTCTTCATTAACGTACACTAT 58.182 33.333 0.00 0.00 0.00 2.12
3049 3397 9.647797 TTCATTCTTCATTAACGTACACTATGT 57.352 29.630 0.00 0.00 0.00 2.29
3050 3398 9.083080 TCATTCTTCATTAACGTACACTATGTG 57.917 33.333 0.00 0.00 39.75 3.21
3051 3399 6.880822 TCTTCATTAACGTACACTATGTGC 57.119 37.500 0.00 0.00 36.98 4.57
3052 3400 6.391537 TCTTCATTAACGTACACTATGTGCA 58.608 36.000 0.00 0.00 36.98 4.57
3053 3401 7.039270 TCTTCATTAACGTACACTATGTGCAT 58.961 34.615 0.00 0.00 36.98 3.96
3054 3402 6.582437 TCATTAACGTACACTATGTGCATG 57.418 37.500 0.00 0.00 36.98 4.06
3061 3417 4.025730 CGTACACTATGTGCATGGATCAAC 60.026 45.833 2.57 0.00 36.98 3.18
3081 3437 0.572590 GCTAACTGCTCGCATGTACG 59.427 55.000 0.00 0.00 38.95 3.67
3082 3438 1.200483 CTAACTGCTCGCATGTACGG 58.800 55.000 0.00 0.00 0.00 4.02
3084 3440 0.736325 AACTGCTCGCATGTACGGAC 60.736 55.000 0.00 0.00 0.00 4.79
3088 3444 1.872234 CTCGCATGTACGGACACGG 60.872 63.158 0.33 0.00 46.48 4.94
3095 3451 0.528924 TGTACGGACACGGGATCTTG 59.471 55.000 0.00 0.00 46.48 3.02
3098 3454 1.153369 CGGACACGGGATCTTGCAT 60.153 57.895 0.00 0.00 36.18 3.96
3099 3455 0.744414 CGGACACGGGATCTTGCATT 60.744 55.000 0.00 0.00 36.18 3.56
3100 3456 1.472552 CGGACACGGGATCTTGCATTA 60.473 52.381 0.00 0.00 36.18 1.90
3101 3457 1.940613 GGACACGGGATCTTGCATTAC 59.059 52.381 0.00 0.00 0.00 1.89
3114 3503 1.073763 TGCATTACTCTGGCAGGTGTT 59.926 47.619 15.73 0.00 32.95 3.32
3241 3630 2.869636 GCAGATCTCCCGAAATGCTAGG 60.870 54.545 0.00 0.00 33.99 3.02
3297 3690 1.226128 GTCGCTTCATTGCTTCGCC 60.226 57.895 0.00 0.00 0.00 5.54
3298 3691 1.670730 TCGCTTCATTGCTTCGCCA 60.671 52.632 0.00 0.00 0.00 5.69
3351 3744 2.049063 GCGTGTCCAGCGAGTTCT 60.049 61.111 0.00 0.00 0.00 3.01
3549 3943 5.892348 TCCCTATCTGTATGTATCTGCAGA 58.108 41.667 20.79 20.79 41.43 4.26
3660 4056 7.701257 TGGGTTCTAGCTATTTAATAAGGGT 57.299 36.000 0.00 0.00 0.00 4.34
3661 4057 7.514721 TGGGTTCTAGCTATTTAATAAGGGTG 58.485 38.462 0.00 0.00 0.00 4.61
3662 4058 7.128263 TGGGTTCTAGCTATTTAATAAGGGTGT 59.872 37.037 0.00 0.00 0.00 4.16
3663 4059 7.444487 GGGTTCTAGCTATTTAATAAGGGTGTG 59.556 40.741 0.00 0.00 0.00 3.82
3664 4060 7.444487 GGTTCTAGCTATTTAATAAGGGTGTGG 59.556 40.741 0.00 0.00 0.00 4.17
3665 4061 6.531021 TCTAGCTATTTAATAAGGGTGTGGC 58.469 40.000 0.00 0.00 0.00 5.01
3666 4062 5.388599 AGCTATTTAATAAGGGTGTGGCT 57.611 39.130 0.00 0.00 0.00 4.75
3667 4063 5.766590 AGCTATTTAATAAGGGTGTGGCTT 58.233 37.500 0.00 0.00 0.00 4.35
3668 4064 5.594317 AGCTATTTAATAAGGGTGTGGCTTG 59.406 40.000 0.00 0.00 0.00 4.01
3669 4065 5.221244 GCTATTTAATAAGGGTGTGGCTTGG 60.221 44.000 0.00 0.00 0.00 3.61
3670 4066 3.818295 TTAATAAGGGTGTGGCTTGGT 57.182 42.857 0.00 0.00 0.00 3.67
3671 4067 2.215942 AATAAGGGTGTGGCTTGGTC 57.784 50.000 0.00 0.00 0.00 4.02
3672 4068 1.372501 ATAAGGGTGTGGCTTGGTCT 58.627 50.000 0.00 0.00 0.00 3.85
3673 4069 0.690762 TAAGGGTGTGGCTTGGTCTC 59.309 55.000 0.00 0.00 0.00 3.36
3674 4070 1.352622 AAGGGTGTGGCTTGGTCTCA 61.353 55.000 0.00 0.00 0.00 3.27
3675 4071 1.302832 GGGTGTGGCTTGGTCTCAG 60.303 63.158 0.00 0.00 0.00 3.35
3676 4072 1.451936 GGTGTGGCTTGGTCTCAGT 59.548 57.895 0.00 0.00 0.00 3.41
3677 4073 0.603975 GGTGTGGCTTGGTCTCAGTC 60.604 60.000 0.00 0.00 0.00 3.51
3678 4074 0.946221 GTGTGGCTTGGTCTCAGTCG 60.946 60.000 0.00 0.00 0.00 4.18
3679 4075 1.112916 TGTGGCTTGGTCTCAGTCGA 61.113 55.000 0.00 0.00 0.00 4.20
3680 4076 0.667792 GTGGCTTGGTCTCAGTCGAC 60.668 60.000 7.70 7.70 0.00 4.20
3681 4077 0.827925 TGGCTTGGTCTCAGTCGACT 60.828 55.000 13.58 13.58 34.38 4.18
3682 4078 0.389166 GGCTTGGTCTCAGTCGACTG 60.389 60.000 34.76 34.76 45.08 3.51
3695 4091 5.769967 CAGTCGACTGAGATTTAACCAAG 57.230 43.478 36.73 7.53 46.59 3.61
3696 4092 5.230942 CAGTCGACTGAGATTTAACCAAGT 58.769 41.667 36.73 0.00 46.59 3.16
3697 4093 5.346281 CAGTCGACTGAGATTTAACCAAGTC 59.654 44.000 36.73 0.00 46.59 3.01
3698 4094 5.244178 AGTCGACTGAGATTTAACCAAGTCT 59.756 40.000 19.30 0.00 33.74 3.24
3699 4095 5.573669 GTCGACTGAGATTTAACCAAGTCTC 59.426 44.000 8.70 3.67 44.01 3.36
3700 4096 4.559251 CGACTGAGATTTAACCAAGTCTCG 59.441 45.833 5.71 4.03 45.70 4.04
3702 4098 4.822026 CTGAGATTTAACCAAGTCTCGGT 58.178 43.478 9.41 0.00 45.70 4.69
3703 4099 4.817517 TGAGATTTAACCAAGTCTCGGTC 58.182 43.478 5.71 0.00 45.70 4.79
3704 4100 4.282449 TGAGATTTAACCAAGTCTCGGTCA 59.718 41.667 5.71 0.00 45.70 4.02
3705 4101 5.221561 TGAGATTTAACCAAGTCTCGGTCAA 60.222 40.000 5.71 0.00 45.70 3.18
3706 4102 5.238583 AGATTTAACCAAGTCTCGGTCAAG 58.761 41.667 0.00 0.00 34.99 3.02
3707 4103 4.411256 TTTAACCAAGTCTCGGTCAAGT 57.589 40.909 0.00 0.00 34.99 3.16
3708 4104 2.240493 AACCAAGTCTCGGTCAAGTG 57.760 50.000 0.00 0.00 34.99 3.16
3709 4105 1.410004 ACCAAGTCTCGGTCAAGTGA 58.590 50.000 0.00 0.00 27.30 3.41
3710 4106 1.068741 ACCAAGTCTCGGTCAAGTGAC 59.931 52.381 2.69 2.69 44.04 3.67
3711 4107 1.068588 CCAAGTCTCGGTCAAGTGACA 59.931 52.381 13.21 0.00 46.47 3.58
3712 4108 2.289072 CCAAGTCTCGGTCAAGTGACAT 60.289 50.000 13.21 0.00 46.47 3.06
3713 4109 3.056821 CCAAGTCTCGGTCAAGTGACATA 60.057 47.826 13.21 0.04 46.47 2.29
3714 4110 4.556233 CAAGTCTCGGTCAAGTGACATAA 58.444 43.478 13.21 0.00 46.47 1.90
3715 4111 4.175787 AGTCTCGGTCAAGTGACATAAC 57.824 45.455 13.21 5.79 46.47 1.89
3716 4112 3.572682 AGTCTCGGTCAAGTGACATAACA 59.427 43.478 13.21 0.00 46.47 2.41
3717 4113 4.220821 AGTCTCGGTCAAGTGACATAACAT 59.779 41.667 13.21 0.00 46.47 2.71
3718 4114 4.327357 GTCTCGGTCAAGTGACATAACATG 59.673 45.833 13.21 0.00 46.47 3.21
3719 4115 3.000041 TCGGTCAAGTGACATAACATGC 59.000 45.455 13.21 0.00 46.47 4.06
3720 4116 2.741517 CGGTCAAGTGACATAACATGCA 59.258 45.455 13.21 0.00 46.47 3.96
3721 4117 3.188254 CGGTCAAGTGACATAACATGCAA 59.812 43.478 13.21 0.00 46.47 4.08
3722 4118 4.320129 CGGTCAAGTGACATAACATGCAAA 60.320 41.667 13.21 0.00 46.47 3.68
3723 4119 5.527951 GGTCAAGTGACATAACATGCAAAA 58.472 37.500 13.21 0.00 46.47 2.44
3724 4120 5.630680 GGTCAAGTGACATAACATGCAAAAG 59.369 40.000 13.21 0.00 46.47 2.27
3725 4121 5.117592 GTCAAGTGACATAACATGCAAAAGC 59.882 40.000 6.57 0.00 44.18 3.51
3726 4122 3.825308 AGTGACATAACATGCAAAAGCG 58.175 40.909 0.00 0.00 0.00 4.68
3727 4123 3.501828 AGTGACATAACATGCAAAAGCGA 59.498 39.130 0.00 0.00 0.00 4.93
3728 4124 4.023279 AGTGACATAACATGCAAAAGCGAA 60.023 37.500 0.00 0.00 0.00 4.70
3729 4125 4.679197 GTGACATAACATGCAAAAGCGAAA 59.321 37.500 0.00 0.00 0.00 3.46
3730 4126 5.174761 GTGACATAACATGCAAAAGCGAAAA 59.825 36.000 0.00 0.00 0.00 2.29
3731 4127 5.925397 TGACATAACATGCAAAAGCGAAAAT 59.075 32.000 0.00 0.00 0.00 1.82
3732 4128 6.128876 TGACATAACATGCAAAAGCGAAAATG 60.129 34.615 0.00 0.00 0.00 2.32
3733 4129 5.925397 ACATAACATGCAAAAGCGAAAATGA 59.075 32.000 0.00 0.00 0.00 2.57
3734 4130 6.423302 ACATAACATGCAAAAGCGAAAATGAA 59.577 30.769 0.00 0.00 0.00 2.57
3735 4131 5.731599 AACATGCAAAAGCGAAAATGAAA 57.268 30.435 0.00 0.00 0.00 2.69
3736 4132 5.731599 ACATGCAAAAGCGAAAATGAAAA 57.268 30.435 0.00 0.00 0.00 2.29
3737 4133 6.116680 ACATGCAAAAGCGAAAATGAAAAA 57.883 29.167 0.00 0.00 0.00 1.94
3781 4177 9.468532 TCATGAATCTCAATGTAAGATCTTACG 57.531 33.333 30.85 20.97 46.19 3.18
3782 4178 9.468532 CATGAATCTCAATGTAAGATCTTACGA 57.531 33.333 30.85 23.80 46.19 3.43
3793 4189 9.723447 ATGTAAGATCTTACGAATATAGCATCG 57.277 33.333 30.85 4.40 46.19 3.84
3794 4190 8.943002 TGTAAGATCTTACGAATATAGCATCGA 58.057 33.333 30.85 12.76 46.19 3.59
3795 4191 9.212687 GTAAGATCTTACGAATATAGCATCGAC 57.787 37.037 25.68 3.95 41.43 4.20
3796 4192 7.618502 AGATCTTACGAATATAGCATCGACT 57.381 36.000 11.05 0.00 41.43 4.18
3797 4193 7.468441 AGATCTTACGAATATAGCATCGACTG 58.532 38.462 11.05 0.00 41.43 3.51
3798 4194 6.796705 TCTTACGAATATAGCATCGACTGA 57.203 37.500 11.05 4.62 41.43 3.41
3799 4195 6.832804 TCTTACGAATATAGCATCGACTGAG 58.167 40.000 11.05 4.95 41.43 3.35
3800 4196 6.649557 TCTTACGAATATAGCATCGACTGAGA 59.350 38.462 11.05 6.54 41.43 3.27
3801 4197 5.037015 ACGAATATAGCATCGACTGAGAC 57.963 43.478 11.05 0.00 41.43 3.36
3802 4198 4.757657 ACGAATATAGCATCGACTGAGACT 59.242 41.667 11.05 0.00 41.43 3.24
3803 4199 5.239744 ACGAATATAGCATCGACTGAGACTT 59.760 40.000 11.05 0.00 41.43 3.01
3804 4200 6.427242 ACGAATATAGCATCGACTGAGACTTA 59.573 38.462 11.05 0.00 41.43 2.24
3805 4201 6.958752 CGAATATAGCATCGACTGAGACTTAG 59.041 42.308 0.00 0.00 41.43 2.18
3806 4202 7.360522 CGAATATAGCATCGACTGAGACTTAGT 60.361 40.741 0.00 0.00 41.43 2.24
3807 4203 8.850007 AATATAGCATCGACTGAGACTTAGTA 57.150 34.615 0.00 0.00 0.00 1.82
3808 4204 8.850007 ATATAGCATCGACTGAGACTTAGTAA 57.150 34.615 0.00 0.00 0.00 2.24
3809 4205 5.493133 AGCATCGACTGAGACTTAGTAAG 57.507 43.478 8.41 8.41 0.00 2.34
3810 4206 5.186942 AGCATCGACTGAGACTTAGTAAGA 58.813 41.667 16.89 3.99 0.00 2.10
3811 4207 5.065474 AGCATCGACTGAGACTTAGTAAGAC 59.935 44.000 16.89 10.43 0.00 3.01
3812 4208 5.065474 GCATCGACTGAGACTTAGTAAGACT 59.935 44.000 16.89 15.17 36.25 3.24
3813 4209 6.482835 CATCGACTGAGACTTAGTAAGACTG 58.517 44.000 17.78 8.43 33.75 3.51
3814 4210 5.791666 TCGACTGAGACTTAGTAAGACTGA 58.208 41.667 17.78 9.93 33.75 3.41
3815 4211 6.408035 TCGACTGAGACTTAGTAAGACTGAT 58.592 40.000 17.78 4.89 33.75 2.90
3816 4212 6.879993 TCGACTGAGACTTAGTAAGACTGATT 59.120 38.462 17.78 5.66 33.75 2.57
3817 4213 7.390996 TCGACTGAGACTTAGTAAGACTGATTT 59.609 37.037 17.78 2.14 33.75 2.17
3818 4214 8.666573 CGACTGAGACTTAGTAAGACTGATTTA 58.333 37.037 17.78 1.40 33.75 1.40
3830 4226 9.498176 AGTAAGACTGATTTAACAAATAACGGT 57.502 29.630 0.00 0.00 0.00 4.83
3834 4230 9.458374 AGACTGATTTAACAAATAACGGTTTTG 57.542 29.630 0.00 1.01 39.43 2.44
3835 4231 9.240159 GACTGATTTAACAAATAACGGTTTTGT 57.760 29.630 0.00 1.70 46.38 2.83
3848 4244 9.518906 AATAACGGTTTTGTTAAACTTTAGGTG 57.481 29.630 0.00 0.00 42.61 4.00
3849 4245 5.342433 ACGGTTTTGTTAAACTTTAGGTGC 58.658 37.500 0.00 0.00 42.61 5.01
3850 4246 4.741185 CGGTTTTGTTAAACTTTAGGTGCC 59.259 41.667 0.00 0.00 42.61 5.01
3851 4247 5.450826 CGGTTTTGTTAAACTTTAGGTGCCT 60.451 40.000 0.00 0.00 42.61 4.75
3852 4248 5.751509 GGTTTTGTTAAACTTTAGGTGCCTG 59.248 40.000 0.12 0.00 42.61 4.85
3853 4249 5.523438 TTTGTTAAACTTTAGGTGCCTGG 57.477 39.130 0.12 0.00 0.00 4.45
3854 4250 4.440826 TGTTAAACTTTAGGTGCCTGGA 57.559 40.909 0.00 0.00 0.00 3.86
3855 4251 4.794334 TGTTAAACTTTAGGTGCCTGGAA 58.206 39.130 0.00 0.00 0.00 3.53
3856 4252 5.390387 TGTTAAACTTTAGGTGCCTGGAAT 58.610 37.500 0.00 0.00 0.00 3.01
3857 4253 5.836358 TGTTAAACTTTAGGTGCCTGGAATT 59.164 36.000 0.00 0.00 0.00 2.17
3858 4254 6.325286 TGTTAAACTTTAGGTGCCTGGAATTT 59.675 34.615 0.00 0.37 0.00 1.82
3859 4255 5.887214 AAACTTTAGGTGCCTGGAATTTT 57.113 34.783 0.00 1.06 0.00 1.82
3860 4256 6.987403 AAACTTTAGGTGCCTGGAATTTTA 57.013 33.333 0.00 0.00 0.00 1.52
3861 4257 6.590234 AACTTTAGGTGCCTGGAATTTTAG 57.410 37.500 0.00 0.00 0.00 1.85
3862 4258 5.641155 ACTTTAGGTGCCTGGAATTTTAGT 58.359 37.500 0.00 0.00 0.00 2.24
3863 4259 6.075315 ACTTTAGGTGCCTGGAATTTTAGTT 58.925 36.000 0.00 0.00 0.00 2.24
3864 4260 5.975693 TTAGGTGCCTGGAATTTTAGTTG 57.024 39.130 0.00 0.00 0.00 3.16
3865 4261 3.165071 AGGTGCCTGGAATTTTAGTTGG 58.835 45.455 0.00 0.00 0.00 3.77
3866 4262 2.353704 GGTGCCTGGAATTTTAGTTGGC 60.354 50.000 0.00 0.00 39.33 4.52
3867 4263 1.543802 TGCCTGGAATTTTAGTTGGCG 59.456 47.619 0.00 0.00 41.51 5.69
3868 4264 1.544246 GCCTGGAATTTTAGTTGGCGT 59.456 47.619 0.00 0.00 0.00 5.68
3869 4265 2.415491 GCCTGGAATTTTAGTTGGCGTC 60.415 50.000 0.00 0.00 0.00 5.19
3870 4266 2.817258 CCTGGAATTTTAGTTGGCGTCA 59.183 45.455 0.00 0.00 0.00 4.35
3871 4267 3.119849 CCTGGAATTTTAGTTGGCGTCAG 60.120 47.826 0.00 0.00 0.00 3.51
3872 4268 3.745799 TGGAATTTTAGTTGGCGTCAGA 58.254 40.909 0.00 0.00 0.00 3.27
3873 4269 3.500680 TGGAATTTTAGTTGGCGTCAGAC 59.499 43.478 0.00 0.00 0.00 3.51
3874 4270 3.500680 GGAATTTTAGTTGGCGTCAGACA 59.499 43.478 0.41 0.00 0.00 3.41
3875 4271 4.464112 GAATTTTAGTTGGCGTCAGACAC 58.536 43.478 0.41 0.00 33.22 3.67
3876 4272 2.902705 TTTAGTTGGCGTCAGACACT 57.097 45.000 0.41 0.00 33.22 3.55
3877 4273 2.902705 TTAGTTGGCGTCAGACACTT 57.097 45.000 0.00 0.00 33.22 3.16
3878 4274 2.902705 TAGTTGGCGTCAGACACTTT 57.097 45.000 0.00 0.00 33.22 2.66
3879 4275 2.038387 AGTTGGCGTCAGACACTTTT 57.962 45.000 0.41 0.00 33.22 2.27
3880 4276 2.365582 AGTTGGCGTCAGACACTTTTT 58.634 42.857 0.41 0.00 33.22 1.94
3881 4277 2.354821 AGTTGGCGTCAGACACTTTTTC 59.645 45.455 0.41 0.00 33.22 2.29
3882 4278 1.305201 TGGCGTCAGACACTTTTTCC 58.695 50.000 0.41 0.00 0.00 3.13
3883 4279 1.134220 TGGCGTCAGACACTTTTTCCT 60.134 47.619 0.41 0.00 0.00 3.36
3884 4280 1.947456 GGCGTCAGACACTTTTTCCTT 59.053 47.619 0.41 0.00 0.00 3.36
3885 4281 2.031944 GGCGTCAGACACTTTTTCCTTC 60.032 50.000 0.41 0.00 0.00 3.46
3886 4282 2.872858 GCGTCAGACACTTTTTCCTTCT 59.127 45.455 0.41 0.00 0.00 2.85
3887 4283 3.312697 GCGTCAGACACTTTTTCCTTCTT 59.687 43.478 0.41 0.00 0.00 2.52
3888 4284 4.552961 GCGTCAGACACTTTTTCCTTCTTC 60.553 45.833 0.41 0.00 0.00 2.87
3889 4285 4.024809 CGTCAGACACTTTTTCCTTCTTCC 60.025 45.833 0.41 0.00 0.00 3.46
3890 4286 4.276183 GTCAGACACTTTTTCCTTCTTCCC 59.724 45.833 0.00 0.00 0.00 3.97
3891 4287 3.251004 CAGACACTTTTTCCTTCTTCCCG 59.749 47.826 0.00 0.00 0.00 5.14
3892 4288 3.135895 AGACACTTTTTCCTTCTTCCCGA 59.864 43.478 0.00 0.00 0.00 5.14
3893 4289 3.881089 GACACTTTTTCCTTCTTCCCGAA 59.119 43.478 0.00 0.00 0.00 4.30
3894 4290 3.630769 ACACTTTTTCCTTCTTCCCGAAC 59.369 43.478 0.00 0.00 0.00 3.95
3895 4291 2.876550 ACTTTTTCCTTCTTCCCGAACG 59.123 45.455 0.00 0.00 0.00 3.95
3896 4292 2.914695 TTTTCCTTCTTCCCGAACGA 57.085 45.000 0.00 0.00 0.00 3.85
3897 4293 2.450609 TTTCCTTCTTCCCGAACGAG 57.549 50.000 0.00 0.00 0.00 4.18
3898 4294 0.037605 TTCCTTCTTCCCGAACGAGC 60.038 55.000 0.00 0.00 0.00 5.03
3899 4295 1.805945 CCTTCTTCCCGAACGAGCG 60.806 63.158 0.00 0.00 0.00 5.03
3900 4296 1.211969 CTTCTTCCCGAACGAGCGA 59.788 57.895 0.00 0.00 0.00 4.93
3901 4297 0.388134 CTTCTTCCCGAACGAGCGAA 60.388 55.000 0.00 0.00 0.00 4.70
3902 4298 0.032403 TTCTTCCCGAACGAGCGAAA 59.968 50.000 0.00 0.00 0.00 3.46
3903 4299 0.245539 TCTTCCCGAACGAGCGAAAT 59.754 50.000 0.00 0.00 0.00 2.17
3904 4300 0.370273 CTTCCCGAACGAGCGAAATG 59.630 55.000 0.00 0.00 0.00 2.32
3905 4301 1.017177 TTCCCGAACGAGCGAAATGG 61.017 55.000 0.00 0.00 0.00 3.16
3906 4302 1.447140 CCCGAACGAGCGAAATGGA 60.447 57.895 0.00 0.00 0.00 3.41
3907 4303 1.017177 CCCGAACGAGCGAAATGGAA 61.017 55.000 0.00 0.00 0.00 3.53
3908 4304 0.370273 CCGAACGAGCGAAATGGAAG 59.630 55.000 0.00 0.00 0.00 3.46
3909 4305 0.370273 CGAACGAGCGAAATGGAAGG 59.630 55.000 0.00 0.00 0.00 3.46
3910 4306 0.097150 GAACGAGCGAAATGGAAGGC 59.903 55.000 0.00 0.00 0.00 4.35
3911 4307 1.305930 AACGAGCGAAATGGAAGGCC 61.306 55.000 0.00 0.00 0.00 5.19
3925 4321 3.706373 GGCCAGACCTCGCCAGAA 61.706 66.667 0.00 0.00 45.01 3.02
3926 4322 2.347490 GCCAGACCTCGCCAGAAA 59.653 61.111 0.00 0.00 0.00 2.52
3927 4323 1.302511 GCCAGACCTCGCCAGAAAA 60.303 57.895 0.00 0.00 0.00 2.29
3928 4324 1.301677 GCCAGACCTCGCCAGAAAAG 61.302 60.000 0.00 0.00 0.00 2.27
3929 4325 0.321671 CCAGACCTCGCCAGAAAAGA 59.678 55.000 0.00 0.00 0.00 2.52
3930 4326 1.270839 CCAGACCTCGCCAGAAAAGAA 60.271 52.381 0.00 0.00 0.00 2.52
3931 4327 2.072298 CAGACCTCGCCAGAAAAGAAG 58.928 52.381 0.00 0.00 0.00 2.85
3932 4328 0.799393 GACCTCGCCAGAAAAGAAGC 59.201 55.000 0.00 0.00 0.00 3.86
3933 4329 0.108585 ACCTCGCCAGAAAAGAAGCA 59.891 50.000 0.00 0.00 0.00 3.91
3934 4330 1.238439 CCTCGCCAGAAAAGAAGCAA 58.762 50.000 0.00 0.00 0.00 3.91
3935 4331 1.068954 CCTCGCCAGAAAAGAAGCAAC 60.069 52.381 0.00 0.00 0.00 4.17
3936 4332 0.951558 TCGCCAGAAAAGAAGCAACC 59.048 50.000 0.00 0.00 0.00 3.77
3937 4333 0.954452 CGCCAGAAAAGAAGCAACCT 59.046 50.000 0.00 0.00 0.00 3.50
3938 4334 1.068954 CGCCAGAAAAGAAGCAACCTC 60.069 52.381 0.00 0.00 0.00 3.85
3939 4335 1.068954 GCCAGAAAAGAAGCAACCTCG 60.069 52.381 0.00 0.00 0.00 4.63
3940 4336 1.537202 CCAGAAAAGAAGCAACCTCGG 59.463 52.381 0.00 0.00 0.00 4.63
3941 4337 1.068954 CAGAAAAGAAGCAACCTCGGC 60.069 52.381 0.00 0.00 0.00 5.54
3942 4338 0.951558 GAAAAGAAGCAACCTCGGCA 59.048 50.000 0.00 0.00 0.00 5.69
3943 4339 1.336755 GAAAAGAAGCAACCTCGGCAA 59.663 47.619 0.00 0.00 0.00 4.52
3944 4340 1.398692 AAAGAAGCAACCTCGGCAAA 58.601 45.000 0.00 0.00 0.00 3.68
3945 4341 0.954452 AAGAAGCAACCTCGGCAAAG 59.046 50.000 0.00 0.00 0.00 2.77
4281 4677 4.821935 GTTTACCAGTGCAGGGCT 57.178 55.556 4.26 0.00 0.00 5.19
4282 4678 3.036431 GTTTACCAGTGCAGGGCTT 57.964 52.632 4.26 0.00 0.00 4.35
4283 4679 2.194201 GTTTACCAGTGCAGGGCTTA 57.806 50.000 4.26 0.00 0.00 3.09
4284 4680 2.084546 GTTTACCAGTGCAGGGCTTAG 58.915 52.381 4.26 0.00 0.00 2.18
4285 4681 1.651737 TTACCAGTGCAGGGCTTAGA 58.348 50.000 4.26 0.00 0.00 2.10
4286 4682 1.879575 TACCAGTGCAGGGCTTAGAT 58.120 50.000 4.26 0.00 0.00 1.98
4287 4683 0.254178 ACCAGTGCAGGGCTTAGATG 59.746 55.000 4.26 0.00 0.00 2.90
4288 4684 0.465097 CCAGTGCAGGGCTTAGATGG 60.465 60.000 0.00 0.00 0.00 3.51
4289 4685 0.543277 CAGTGCAGGGCTTAGATGGA 59.457 55.000 0.00 0.00 0.00 3.41
4290 4686 1.142465 CAGTGCAGGGCTTAGATGGAT 59.858 52.381 0.00 0.00 0.00 3.41
4291 4687 1.142465 AGTGCAGGGCTTAGATGGATG 59.858 52.381 0.00 0.00 0.00 3.51
4292 4688 0.475475 TGCAGGGCTTAGATGGATGG 59.525 55.000 0.00 0.00 0.00 3.51
4293 4689 0.892814 GCAGGGCTTAGATGGATGGC 60.893 60.000 0.00 0.00 0.00 4.40
4294 4690 0.251077 CAGGGCTTAGATGGATGGCC 60.251 60.000 0.00 0.00 44.22 5.36
4295 4691 1.302832 GGGCTTAGATGGATGGCCG 60.303 63.158 0.00 0.00 43.27 6.13
4296 4692 1.754745 GGCTTAGATGGATGGCCGA 59.245 57.895 0.00 0.00 36.79 5.54
4297 4693 0.321122 GGCTTAGATGGATGGCCGAG 60.321 60.000 0.00 0.00 36.79 4.63
4298 4694 0.321122 GCTTAGATGGATGGCCGAGG 60.321 60.000 0.00 0.00 36.79 4.63
4299 4695 1.051812 CTTAGATGGATGGCCGAGGT 58.948 55.000 0.00 0.00 36.79 3.85
4300 4696 0.758734 TTAGATGGATGGCCGAGGTG 59.241 55.000 0.00 0.00 36.79 4.00
4301 4697 1.121407 TAGATGGATGGCCGAGGTGG 61.121 60.000 0.00 0.00 42.50 4.61
4319 4715 3.883462 CGGCCAGCAACGACAATA 58.117 55.556 2.24 0.00 0.00 1.90
4320 4716 1.715585 CGGCCAGCAACGACAATAG 59.284 57.895 2.24 0.00 0.00 1.73
4321 4717 1.705337 CGGCCAGCAACGACAATAGG 61.705 60.000 2.24 0.00 0.00 2.57
4322 4718 1.376609 GGCCAGCAACGACAATAGGG 61.377 60.000 0.00 0.00 0.00 3.53
4323 4719 1.376609 GCCAGCAACGACAATAGGGG 61.377 60.000 0.00 0.00 0.00 4.79
4324 4720 0.748005 CCAGCAACGACAATAGGGGG 60.748 60.000 0.00 0.00 0.00 5.40
4325 4721 0.251916 CAGCAACGACAATAGGGGGA 59.748 55.000 0.00 0.00 0.00 4.81
4326 4722 0.541863 AGCAACGACAATAGGGGGAG 59.458 55.000 0.00 0.00 0.00 4.30
4327 4723 0.463833 GCAACGACAATAGGGGGAGG 60.464 60.000 0.00 0.00 0.00 4.30
4328 4724 0.909623 CAACGACAATAGGGGGAGGT 59.090 55.000 0.00 0.00 0.00 3.85
4329 4725 1.280998 CAACGACAATAGGGGGAGGTT 59.719 52.381 0.00 0.00 0.00 3.50
4330 4726 0.909623 ACGACAATAGGGGGAGGTTG 59.090 55.000 0.00 0.00 0.00 3.77
4331 4727 1.200519 CGACAATAGGGGGAGGTTGA 58.799 55.000 0.00 0.00 0.00 3.18
4332 4728 1.139058 CGACAATAGGGGGAGGTTGAG 59.861 57.143 0.00 0.00 0.00 3.02
4333 4729 1.490910 GACAATAGGGGGAGGTTGAGG 59.509 57.143 0.00 0.00 0.00 3.86
4334 4730 0.846693 CAATAGGGGGAGGTTGAGGG 59.153 60.000 0.00 0.00 0.00 4.30
4335 4731 0.328548 AATAGGGGGAGGTTGAGGGG 60.329 60.000 0.00 0.00 0.00 4.79
4336 4732 1.243230 ATAGGGGGAGGTTGAGGGGA 61.243 60.000 0.00 0.00 0.00 4.81
4337 4733 1.898190 TAGGGGGAGGTTGAGGGGAG 61.898 65.000 0.00 0.00 0.00 4.30
4338 4734 2.692741 GGGGAGGTTGAGGGGAGG 60.693 72.222 0.00 0.00 0.00 4.30
4339 4735 2.692741 GGGAGGTTGAGGGGAGGG 60.693 72.222 0.00 0.00 0.00 4.30
4340 4736 3.412408 GGAGGTTGAGGGGAGGGC 61.412 72.222 0.00 0.00 0.00 5.19
4341 4737 2.610859 GAGGTTGAGGGGAGGGCA 60.611 66.667 0.00 0.00 0.00 5.36
4342 4738 2.612115 AGGTTGAGGGGAGGGCAG 60.612 66.667 0.00 0.00 0.00 4.85
4343 4739 3.732849 GGTTGAGGGGAGGGCAGG 61.733 72.222 0.00 0.00 0.00 4.85
4344 4740 3.732849 GTTGAGGGGAGGGCAGGG 61.733 72.222 0.00 0.00 0.00 4.45
4357 4753 4.704833 CAGGGCGTGGAGGTGGTG 62.705 72.222 0.00 0.00 0.00 4.17
4358 4754 4.954118 AGGGCGTGGAGGTGGTGA 62.954 66.667 0.00 0.00 0.00 4.02
4359 4755 3.948719 GGGCGTGGAGGTGGTGAA 61.949 66.667 0.00 0.00 0.00 3.18
4360 4756 2.668550 GGCGTGGAGGTGGTGAAC 60.669 66.667 0.00 0.00 0.00 3.18
4361 4757 3.041940 GCGTGGAGGTGGTGAACG 61.042 66.667 0.00 0.00 37.32 3.95
4362 4758 2.357034 CGTGGAGGTGGTGAACGG 60.357 66.667 0.00 0.00 0.00 4.44
4363 4759 2.826702 GTGGAGGTGGTGAACGGT 59.173 61.111 0.00 0.00 0.00 4.83
4364 4760 1.808531 CGTGGAGGTGGTGAACGGTA 61.809 60.000 0.00 0.00 0.00 4.02
4365 4761 0.037605 GTGGAGGTGGTGAACGGTAG 60.038 60.000 0.00 0.00 0.00 3.18
4366 4762 1.079336 GGAGGTGGTGAACGGTAGC 60.079 63.158 0.00 0.00 0.00 3.58
4367 4763 1.445582 GAGGTGGTGAACGGTAGCG 60.446 63.158 13.69 13.69 0.00 4.26
4368 4764 3.116531 GGTGGTGAACGGTAGCGC 61.117 66.667 15.35 0.00 0.00 5.92
4369 4765 3.116531 GTGGTGAACGGTAGCGCC 61.117 66.667 15.35 8.01 35.28 6.53
4370 4766 4.382320 TGGTGAACGGTAGCGCCC 62.382 66.667 15.35 9.85 33.79 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 6.638096 TGTGCATCACAATTATTAGGGATG 57.362 37.500 12.16 12.16 41.69 3.51
53 54 5.054477 GCAGTGGTTGTCTTTGTTCTACTA 58.946 41.667 0.00 0.00 0.00 1.82
66 67 3.790416 ATGGCGTGGCAGTGGTTGT 62.790 57.895 1.74 0.00 0.00 3.32
76 77 2.560504 TCATAGCTTGTAATGGCGTGG 58.439 47.619 0.00 0.00 0.00 4.94
78 79 5.835113 AATTTCATAGCTTGTAATGGCGT 57.165 34.783 0.00 0.00 0.00 5.68
79 80 6.356977 CGTTAATTTCATAGCTTGTAATGGCG 59.643 38.462 0.00 0.00 0.00 5.69
80 81 6.636850 CCGTTAATTTCATAGCTTGTAATGGC 59.363 38.462 0.00 0.00 0.00 4.40
84 85 9.439500 AGTAACCGTTAATTTCATAGCTTGTAA 57.561 29.630 0.00 0.00 0.00 2.41
91 92 9.798994 ACTCAGTAGTAACCGTTAATTTCATAG 57.201 33.333 0.00 0.00 32.84 2.23
108 109 7.443575 TGTTACGAAAGAAGTAGACTCAGTAGT 59.556 37.037 0.00 0.00 39.21 2.73
110 111 7.734924 TGTTACGAAAGAAGTAGACTCAGTA 57.265 36.000 0.00 0.00 0.00 2.74
119 120 4.961438 AGGGGTTGTTACGAAAGAAGTA 57.039 40.909 0.00 0.00 0.00 2.24
130 131 9.816787 ATTTATCACTTCTTAAAGGGGTTGTTA 57.183 29.630 0.00 0.00 36.49 2.41
139 140 7.938140 TGGGGACATTTATCACTTCTTAAAG 57.062 36.000 0.00 0.00 35.11 1.85
157 158 1.376609 GGCAACGATGACATGGGGAC 61.377 60.000 0.00 0.00 33.41 4.46
165 166 1.725641 TCAGACATGGCAACGATGAC 58.274 50.000 0.00 0.00 42.51 3.06
176 177 0.741326 ACCGTCTCCGATCAGACATG 59.259 55.000 12.30 0.00 42.75 3.21
177 178 1.025812 GACCGTCTCCGATCAGACAT 58.974 55.000 12.30 1.59 42.75 3.06
178 179 0.035343 AGACCGTCTCCGATCAGACA 60.035 55.000 12.30 0.00 42.75 3.41
179 180 0.378962 CAGACCGTCTCCGATCAGAC 59.621 60.000 0.00 3.61 39.68 3.51
180 181 0.748367 CCAGACCGTCTCCGATCAGA 60.748 60.000 0.00 0.00 35.63 3.27
181 182 0.748367 TCCAGACCGTCTCCGATCAG 60.748 60.000 0.00 0.00 35.63 2.90
182 183 1.030488 GTCCAGACCGTCTCCGATCA 61.030 60.000 0.00 0.00 35.63 2.92
183 184 1.030488 TGTCCAGACCGTCTCCGATC 61.030 60.000 0.00 0.00 35.63 3.69
184 185 0.611062 TTGTCCAGACCGTCTCCGAT 60.611 55.000 0.00 0.00 35.63 4.18
185 186 1.228337 TTGTCCAGACCGTCTCCGA 60.228 57.895 0.00 0.00 35.63 4.55
186 187 1.213013 CTTGTCCAGACCGTCTCCG 59.787 63.158 0.00 0.00 0.00 4.63
187 188 0.966920 TTCTTGTCCAGACCGTCTCC 59.033 55.000 0.00 0.00 0.00 3.71
188 189 1.340248 TGTTCTTGTCCAGACCGTCTC 59.660 52.381 0.00 0.00 0.00 3.36
189 190 1.410004 TGTTCTTGTCCAGACCGTCT 58.590 50.000 0.00 0.00 0.00 4.18
190 191 2.457366 ATGTTCTTGTCCAGACCGTC 57.543 50.000 0.00 0.00 0.00 4.79
191 192 2.930826 AATGTTCTTGTCCAGACCGT 57.069 45.000 0.00 0.00 0.00 4.83
192 193 4.332819 GGATAAATGTTCTTGTCCAGACCG 59.667 45.833 0.00 0.00 36.77 4.79
193 194 5.355350 CAGGATAAATGTTCTTGTCCAGACC 59.645 44.000 2.55 0.00 38.65 3.85
207 208 7.601886 AGCTCGTCTTGATAATCAGGATAAATG 59.398 37.037 0.00 0.00 34.94 2.32
208 209 7.675062 AGCTCGTCTTGATAATCAGGATAAAT 58.325 34.615 0.00 0.00 34.94 1.40
217 218 6.730175 TCTTCACTAGCTCGTCTTGATAATC 58.270 40.000 0.00 0.00 0.00 1.75
222 223 3.191581 CCTTCTTCACTAGCTCGTCTTGA 59.808 47.826 0.00 0.00 0.00 3.02
229 230 4.021894 TGTCTTGACCTTCTTCACTAGCTC 60.022 45.833 0.00 0.00 0.00 4.09
307 311 9.770097 TTATTGTCATGGCTTTTATTGTTGAAA 57.230 25.926 0.00 0.00 0.00 2.69
308 312 9.941325 ATTATTGTCATGGCTTTTATTGTTGAA 57.059 25.926 0.00 0.00 0.00 2.69
352 356 1.148310 CTGTCGTCAAAATCACCGCT 58.852 50.000 0.00 0.00 0.00 5.52
442 451 9.454585 CTCCCGCGATTATCGTAATATAATTAA 57.545 33.333 16.18 0.00 42.81 1.40
443 452 8.839343 TCTCCCGCGATTATCGTAATATAATTA 58.161 33.333 16.18 0.00 42.81 1.40
444 453 7.709947 TCTCCCGCGATTATCGTAATATAATT 58.290 34.615 16.18 0.00 42.81 1.40
445 454 7.268199 TCTCCCGCGATTATCGTAATATAAT 57.732 36.000 16.18 0.00 42.81 1.28
499 508 0.522626 TGCTGTAGCGCGTACTGTAA 59.477 50.000 8.43 4.13 45.83 2.41
519 528 6.966066 TGTCGTGATTATGTACATGCATTTTG 59.034 34.615 18.81 3.38 0.00 2.44
520 529 7.082700 TGTCGTGATTATGTACATGCATTTT 57.917 32.000 18.81 0.00 0.00 1.82
659 684 3.643320 TCTTCTATATGGGCTGTGTCCTG 59.357 47.826 0.00 0.00 0.00 3.86
675 700 9.231297 CCAAATTAAAGTCAACCTGATCTTCTA 57.769 33.333 0.00 0.00 0.00 2.10
816 852 2.656085 GAGGACGACGATGATGATGAC 58.344 52.381 0.00 0.00 0.00 3.06
828 865 1.131126 TGGATTTACGACGAGGACGAC 59.869 52.381 0.00 0.00 42.66 4.34
834 892 4.718858 TTGTGTTTGGATTTACGACGAG 57.281 40.909 0.00 0.00 0.00 4.18
857 915 1.862602 GATCGTTTGGTGGGTGTGCC 61.863 60.000 0.00 0.00 0.00 5.01
894 952 6.346279 GCAACCTAATTACTTTTGTTTTCGGC 60.346 38.462 0.00 0.00 0.00 5.54
909 967 0.617535 GGGGCCCAAGCAACCTAATT 60.618 55.000 26.86 0.00 42.56 1.40
938 996 5.350640 CCATTGGTCGATGAGATACATGATG 59.649 44.000 0.00 0.00 39.56 3.07
939 997 5.012458 ACCATTGGTCGATGAGATACATGAT 59.988 40.000 1.37 0.00 39.56 2.45
940 998 4.344968 ACCATTGGTCGATGAGATACATGA 59.655 41.667 1.37 0.00 39.56 3.07
941 999 4.635223 ACCATTGGTCGATGAGATACATG 58.365 43.478 1.37 0.00 39.56 3.21
942 1000 4.963318 ACCATTGGTCGATGAGATACAT 57.037 40.909 1.37 0.00 42.47 2.29
943 1001 4.753516 AACCATTGGTCGATGAGATACA 57.246 40.909 9.22 0.00 33.12 2.29
1035 1107 1.566211 TGCTAGCTGCTTCCTCTCTT 58.434 50.000 17.23 0.00 43.37 2.85
1189 1263 2.749541 CGGACACATGTACGTGCAT 58.250 52.632 13.79 13.79 46.66 3.96
1190 1264 4.253442 CGGACACATGTACGTGCA 57.747 55.556 15.12 9.28 46.66 4.57
1234 1320 8.964772 ACTACTGTGGTACGTAAGAATAAGATT 58.035 33.333 0.00 0.00 43.62 2.40
1235 1321 8.517062 ACTACTGTGGTACGTAAGAATAAGAT 57.483 34.615 0.00 0.00 43.62 2.40
1238 1324 8.109705 TCAACTACTGTGGTACGTAAGAATAA 57.890 34.615 0.00 0.00 43.62 1.40
1244 1330 9.195411 CTAAAAATCAACTACTGTGGTACGTAA 57.805 33.333 0.00 0.00 0.00 3.18
1250 1336 7.448469 AGCAATCTAAAAATCAACTACTGTGGT 59.552 33.333 0.00 0.00 0.00 4.16
1251 1337 7.820648 AGCAATCTAAAAATCAACTACTGTGG 58.179 34.615 0.00 0.00 0.00 4.17
1276 1386 4.274705 ACGTGCAACATTCAACAACAGATA 59.725 37.500 0.00 0.00 35.74 1.98
1277 1387 3.066621 ACGTGCAACATTCAACAACAGAT 59.933 39.130 0.00 0.00 35.74 2.90
1289 1399 4.217334 TGATGGAATTGTTACGTGCAACAT 59.783 37.500 4.80 6.79 38.18 2.71
1343 1453 7.035004 TGCTTGCAACAACCTCAATAATAATC 58.965 34.615 0.00 0.00 0.00 1.75
2070 2387 2.591715 GTGAGCGTGTGGTTGGCT 60.592 61.111 0.00 0.00 40.29 4.75
2265 2600 2.441348 TACTCGAGGATGCCGGCA 60.441 61.111 34.80 34.80 0.00 5.69
2308 2643 2.193536 GGTTCTTGCCGTTGCCAGT 61.194 57.895 0.00 0.00 36.33 4.00
2310 2645 2.192861 CAGGTTCTTGCCGTTGCCA 61.193 57.895 0.00 0.00 36.33 4.92
2441 2776 2.926242 GGAACTCCCGGTCCACCA 60.926 66.667 0.00 0.00 35.14 4.17
2850 3191 1.447314 CTTGGCCGGGTCGTAGTTC 60.447 63.158 2.18 0.00 0.00 3.01
2977 3318 1.648165 GCATGCGTATGTGCGAACG 60.648 57.895 15.13 0.00 41.92 3.95
2982 3323 3.912157 GCATGCATGCGTATGTGC 58.088 55.556 33.99 12.54 44.67 4.57
3014 3362 4.650754 AATGAAGAATGAAGCTCCATGC 57.349 40.909 0.00 0.00 43.29 4.06
3025 3373 7.846107 GCACATAGTGTACGTTAATGAAGAATG 59.154 37.037 0.58 0.89 35.75 2.67
3027 3375 6.869388 TGCACATAGTGTACGTTAATGAAGAA 59.131 34.615 0.58 0.00 35.75 2.52
3030 3378 6.036626 CCATGCACATAGTGTACGTTAATGAA 59.963 38.462 0.58 0.00 35.75 2.57
3036 3384 3.603158 TCCATGCACATAGTGTACGTT 57.397 42.857 0.00 0.00 35.75 3.99
3038 3386 3.716601 TGATCCATGCACATAGTGTACG 58.283 45.455 0.00 0.00 35.75 3.67
3039 3387 4.025730 CGTTGATCCATGCACATAGTGTAC 60.026 45.833 0.00 0.00 35.75 2.90
3040 3388 4.119136 CGTTGATCCATGCACATAGTGTA 58.881 43.478 0.00 0.00 35.75 2.90
3043 3391 1.942657 GCGTTGATCCATGCACATAGT 59.057 47.619 6.13 0.00 0.00 2.12
3045 3393 2.330440 AGCGTTGATCCATGCACATA 57.670 45.000 13.05 0.00 0.00 2.29
3046 3394 2.330440 TAGCGTTGATCCATGCACAT 57.670 45.000 13.05 0.00 0.00 3.21
3047 3395 1.737236 GTTAGCGTTGATCCATGCACA 59.263 47.619 13.05 0.00 0.00 4.57
3048 3396 2.009774 AGTTAGCGTTGATCCATGCAC 58.990 47.619 13.05 3.96 0.00 4.57
3049 3397 2.009051 CAGTTAGCGTTGATCCATGCA 58.991 47.619 13.05 0.00 0.00 3.96
3050 3398 1.268234 GCAGTTAGCGTTGATCCATGC 60.268 52.381 2.77 2.77 0.00 4.06
3051 3399 2.744787 GCAGTTAGCGTTGATCCATG 57.255 50.000 0.00 0.00 0.00 3.66
3081 3437 1.940613 GTAATGCAAGATCCCGTGTCC 59.059 52.381 0.00 0.00 0.00 4.02
3082 3438 2.866762 GAGTAATGCAAGATCCCGTGTC 59.133 50.000 0.00 0.00 0.00 3.67
3084 3440 2.868583 CAGAGTAATGCAAGATCCCGTG 59.131 50.000 0.00 0.00 0.00 4.94
3088 3444 2.877168 CTGCCAGAGTAATGCAAGATCC 59.123 50.000 0.00 0.00 34.06 3.36
3095 3451 1.826385 AACACCTGCCAGAGTAATGC 58.174 50.000 0.00 0.00 0.00 3.56
3098 3454 1.493022 ACCAAACACCTGCCAGAGTAA 59.507 47.619 0.00 0.00 0.00 2.24
3099 3455 1.136828 ACCAAACACCTGCCAGAGTA 58.863 50.000 0.00 0.00 0.00 2.59
3100 3456 0.258774 AACCAAACACCTGCCAGAGT 59.741 50.000 0.00 0.00 0.00 3.24
3101 3457 0.954452 GAACCAAACACCTGCCAGAG 59.046 55.000 0.00 0.00 0.00 3.35
3114 3503 3.075148 CAAATGGCAATGCATGAACCAA 58.925 40.909 16.82 4.34 33.30 3.67
3241 3630 3.914966 ACGATCGATCTTGATAATCACGC 59.085 43.478 24.34 0.00 0.00 5.34
3297 3690 1.737793 GGATAACAAAGTGAGGCGGTG 59.262 52.381 0.00 0.00 0.00 4.94
3298 3691 1.674817 CGGATAACAAAGTGAGGCGGT 60.675 52.381 0.00 0.00 0.00 5.68
3388 3782 4.963953 CGCCTGAAAAATGAATTAGCGTAG 59.036 41.667 0.00 0.00 36.53 3.51
3527 3921 5.714333 ACTCTGCAGATACATACAGATAGGG 59.286 44.000 18.63 1.74 38.41 3.53
3640 4036 6.996282 GCCACACCCTTATTAAATAGCTAGAA 59.004 38.462 0.00 0.00 0.00 2.10
3642 4038 6.534634 AGCCACACCCTTATTAAATAGCTAG 58.465 40.000 0.00 0.00 0.00 3.42
3654 4050 0.690762 GAGACCAAGCCACACCCTTA 59.309 55.000 0.00 0.00 0.00 2.69
3660 4056 1.112916 TCGACTGAGACCAAGCCACA 61.113 55.000 0.00 0.00 0.00 4.17
3661 4057 0.667792 GTCGACTGAGACCAAGCCAC 60.668 60.000 8.70 0.00 35.22 5.01
3662 4058 0.827925 AGTCGACTGAGACCAAGCCA 60.828 55.000 19.30 0.00 41.83 4.75
3663 4059 0.389166 CAGTCGACTGAGACCAAGCC 60.389 60.000 36.73 0.00 46.59 4.35
3664 4060 3.114558 CAGTCGACTGAGACCAAGC 57.885 57.895 36.73 0.00 46.59 4.01
3673 4069 5.230942 ACTTGGTTAAATCTCAGTCGACTG 58.769 41.667 34.76 34.76 45.08 3.51
3674 4070 5.244178 AGACTTGGTTAAATCTCAGTCGACT 59.756 40.000 13.58 13.58 0.00 4.18
3675 4071 5.471257 AGACTTGGTTAAATCTCAGTCGAC 58.529 41.667 7.70 7.70 0.00 4.20
3676 4072 5.619309 CGAGACTTGGTTAAATCTCAGTCGA 60.619 44.000 0.00 0.00 37.97 4.20
3677 4073 4.559251 CGAGACTTGGTTAAATCTCAGTCG 59.441 45.833 0.00 0.00 37.97 4.18
3678 4074 4.865365 CCGAGACTTGGTTAAATCTCAGTC 59.135 45.833 0.00 0.00 37.97 3.51
3679 4075 4.283722 ACCGAGACTTGGTTAAATCTCAGT 59.716 41.667 8.76 0.00 37.97 3.41
3680 4076 4.822026 ACCGAGACTTGGTTAAATCTCAG 58.178 43.478 8.76 0.00 37.97 3.35
3681 4077 4.282449 TGACCGAGACTTGGTTAAATCTCA 59.718 41.667 15.92 4.60 40.63 3.27
3682 4078 4.817517 TGACCGAGACTTGGTTAAATCTC 58.182 43.478 15.92 1.97 40.63 2.75
3683 4079 4.884668 TGACCGAGACTTGGTTAAATCT 57.115 40.909 15.92 0.00 40.63 2.40
3684 4080 4.995487 ACTTGACCGAGACTTGGTTAAATC 59.005 41.667 15.92 3.38 40.63 2.17
3685 4081 4.755123 CACTTGACCGAGACTTGGTTAAAT 59.245 41.667 15.92 5.18 40.63 1.40
3686 4082 4.124238 CACTTGACCGAGACTTGGTTAAA 58.876 43.478 15.92 12.11 40.63 1.52
3687 4083 3.385433 TCACTTGACCGAGACTTGGTTAA 59.615 43.478 15.92 16.10 40.63 2.01
3688 4084 2.960384 TCACTTGACCGAGACTTGGTTA 59.040 45.455 15.92 9.09 40.63 2.85
3689 4085 1.760613 TCACTTGACCGAGACTTGGTT 59.239 47.619 15.92 0.00 40.63 3.67
3690 4086 1.068741 GTCACTTGACCGAGACTTGGT 59.931 52.381 14.73 14.73 44.10 3.67
3691 4087 1.068588 TGTCACTTGACCGAGACTTGG 59.931 52.381 7.25 7.25 44.15 3.61
3692 4088 2.509052 TGTCACTTGACCGAGACTTG 57.491 50.000 6.91 0.00 44.15 3.16
3693 4089 4.038763 TGTTATGTCACTTGACCGAGACTT 59.961 41.667 6.91 0.00 44.15 3.01
3694 4090 3.572682 TGTTATGTCACTTGACCGAGACT 59.427 43.478 6.91 0.00 44.15 3.24
3695 4091 3.909430 TGTTATGTCACTTGACCGAGAC 58.091 45.455 6.91 2.11 44.15 3.36
3696 4092 4.494484 CATGTTATGTCACTTGACCGAGA 58.506 43.478 6.91 0.00 44.15 4.04
3697 4093 3.062639 GCATGTTATGTCACTTGACCGAG 59.937 47.826 6.91 0.00 44.15 4.63
3698 4094 3.000041 GCATGTTATGTCACTTGACCGA 59.000 45.455 6.91 0.00 44.15 4.69
3699 4095 2.741517 TGCATGTTATGTCACTTGACCG 59.258 45.455 6.91 0.00 44.15 4.79
3700 4096 4.764679 TTGCATGTTATGTCACTTGACC 57.235 40.909 6.91 0.00 44.15 4.02
3701 4097 5.117592 GCTTTTGCATGTTATGTCACTTGAC 59.882 40.000 2.19 2.19 46.58 3.18
3702 4098 5.221880 GCTTTTGCATGTTATGTCACTTGA 58.778 37.500 0.00 0.00 46.58 3.02
3703 4099 5.505165 GCTTTTGCATGTTATGTCACTTG 57.495 39.130 0.00 0.00 46.58 3.16
3755 4151 9.468532 CGTAAGATCTTACATTGAGATTCATGA 57.531 33.333 33.89 0.00 44.12 3.07
3756 4152 9.468532 TCGTAAGATCTTACATTGAGATTCATG 57.531 33.333 33.89 18.74 44.12 3.07
3776 4172 6.739100 GTCTCAGTCGATGCTATATTCGTAAG 59.261 42.308 0.00 0.00 36.74 2.34
3777 4173 6.427242 AGTCTCAGTCGATGCTATATTCGTAA 59.573 38.462 0.00 0.00 36.74 3.18
3778 4174 5.932883 AGTCTCAGTCGATGCTATATTCGTA 59.067 40.000 0.00 0.00 36.74 3.43
3779 4175 4.757657 AGTCTCAGTCGATGCTATATTCGT 59.242 41.667 0.00 0.00 36.74 3.85
3780 4176 5.289917 AGTCTCAGTCGATGCTATATTCG 57.710 43.478 0.00 0.00 36.72 3.34
3781 4177 7.812648 ACTAAGTCTCAGTCGATGCTATATTC 58.187 38.462 0.00 0.00 0.00 1.75
3782 4178 7.753309 ACTAAGTCTCAGTCGATGCTATATT 57.247 36.000 0.00 0.00 0.00 1.28
3783 4179 8.850007 TTACTAAGTCTCAGTCGATGCTATAT 57.150 34.615 0.00 0.00 0.00 0.86
3784 4180 8.148999 TCTTACTAAGTCTCAGTCGATGCTATA 58.851 37.037 0.00 0.00 0.00 1.31
3785 4181 6.993308 TCTTACTAAGTCTCAGTCGATGCTAT 59.007 38.462 0.00 0.00 0.00 2.97
3786 4182 6.258287 GTCTTACTAAGTCTCAGTCGATGCTA 59.742 42.308 0.00 0.00 0.00 3.49
3787 4183 5.065474 GTCTTACTAAGTCTCAGTCGATGCT 59.935 44.000 0.00 0.00 0.00 3.79
3788 4184 5.065474 AGTCTTACTAAGTCTCAGTCGATGC 59.935 44.000 0.00 0.00 0.00 3.91
3789 4185 6.314152 TCAGTCTTACTAAGTCTCAGTCGATG 59.686 42.308 0.00 0.00 0.00 3.84
3790 4186 6.408035 TCAGTCTTACTAAGTCTCAGTCGAT 58.592 40.000 0.00 0.00 0.00 3.59
3791 4187 5.791666 TCAGTCTTACTAAGTCTCAGTCGA 58.208 41.667 0.00 0.00 0.00 4.20
3792 4188 6.671614 ATCAGTCTTACTAAGTCTCAGTCG 57.328 41.667 0.00 0.00 0.00 4.18
3804 4200 9.498176 ACCGTTATTTGTTAAATCAGTCTTACT 57.502 29.630 0.00 0.00 32.38 2.24
3808 4204 9.458374 CAAAACCGTTATTTGTTAAATCAGTCT 57.542 29.630 0.00 0.00 33.99 3.24
3809 4205 9.240159 ACAAAACCGTTATTTGTTAAATCAGTC 57.760 29.630 5.05 0.00 45.97 3.51
3822 4218 9.518906 CACCTAAAGTTTAACAAAACCGTTATT 57.481 29.630 0.00 0.00 31.65 1.40
3823 4219 7.648908 GCACCTAAAGTTTAACAAAACCGTTAT 59.351 33.333 0.00 0.00 31.65 1.89
3824 4220 6.971756 GCACCTAAAGTTTAACAAAACCGTTA 59.028 34.615 0.00 0.00 33.28 3.18
3825 4221 5.806502 GCACCTAAAGTTTAACAAAACCGTT 59.193 36.000 0.00 0.00 33.28 4.44
3826 4222 5.342433 GCACCTAAAGTTTAACAAAACCGT 58.658 37.500 0.00 0.00 33.28 4.83
3827 4223 4.741185 GGCACCTAAAGTTTAACAAAACCG 59.259 41.667 0.00 0.00 33.28 4.44
3828 4224 5.751509 CAGGCACCTAAAGTTTAACAAAACC 59.248 40.000 0.00 0.00 33.28 3.27
3829 4225 5.751509 CCAGGCACCTAAAGTTTAACAAAAC 59.248 40.000 0.00 0.00 0.00 2.43
3830 4226 5.657302 TCCAGGCACCTAAAGTTTAACAAAA 59.343 36.000 0.00 0.00 0.00 2.44
3831 4227 5.202004 TCCAGGCACCTAAAGTTTAACAAA 58.798 37.500 0.00 0.00 0.00 2.83
3832 4228 4.794334 TCCAGGCACCTAAAGTTTAACAA 58.206 39.130 0.00 0.00 0.00 2.83
3833 4229 4.440826 TCCAGGCACCTAAAGTTTAACA 57.559 40.909 0.00 0.00 0.00 2.41
3834 4230 5.977489 ATTCCAGGCACCTAAAGTTTAAC 57.023 39.130 0.00 0.00 0.00 2.01
3835 4231 6.987403 AAATTCCAGGCACCTAAAGTTTAA 57.013 33.333 0.00 0.00 0.00 1.52
3836 4232 6.987403 AAAATTCCAGGCACCTAAAGTTTA 57.013 33.333 7.32 0.00 0.00 2.01
3837 4233 5.887214 AAAATTCCAGGCACCTAAAGTTT 57.113 34.783 0.00 0.00 0.00 2.66
3838 4234 6.075315 ACTAAAATTCCAGGCACCTAAAGTT 58.925 36.000 0.00 0.00 0.00 2.66
3839 4235 5.641155 ACTAAAATTCCAGGCACCTAAAGT 58.359 37.500 0.00 0.00 0.00 2.66
3840 4236 6.389906 CAACTAAAATTCCAGGCACCTAAAG 58.610 40.000 0.00 0.00 0.00 1.85
3841 4237 5.245075 CCAACTAAAATTCCAGGCACCTAAA 59.755 40.000 0.00 0.00 0.00 1.85
3842 4238 4.770010 CCAACTAAAATTCCAGGCACCTAA 59.230 41.667 0.00 0.00 0.00 2.69
3843 4239 4.340617 CCAACTAAAATTCCAGGCACCTA 58.659 43.478 0.00 0.00 0.00 3.08
3844 4240 3.165071 CCAACTAAAATTCCAGGCACCT 58.835 45.455 0.00 0.00 0.00 4.00
3845 4241 2.353704 GCCAACTAAAATTCCAGGCACC 60.354 50.000 0.00 0.00 40.29 5.01
3846 4242 2.671070 CGCCAACTAAAATTCCAGGCAC 60.671 50.000 0.00 0.00 40.58 5.01
3847 4243 1.543802 CGCCAACTAAAATTCCAGGCA 59.456 47.619 0.00 0.00 40.58 4.75
3848 4244 1.544246 ACGCCAACTAAAATTCCAGGC 59.456 47.619 0.00 0.00 37.32 4.85
3849 4245 2.817258 TGACGCCAACTAAAATTCCAGG 59.183 45.455 0.00 0.00 0.00 4.45
3850 4246 3.751175 TCTGACGCCAACTAAAATTCCAG 59.249 43.478 0.00 0.00 0.00 3.86
3851 4247 3.500680 GTCTGACGCCAACTAAAATTCCA 59.499 43.478 0.00 0.00 0.00 3.53
3852 4248 3.500680 TGTCTGACGCCAACTAAAATTCC 59.499 43.478 2.98 0.00 0.00 3.01
3853 4249 4.213482 AGTGTCTGACGCCAACTAAAATTC 59.787 41.667 17.11 0.00 0.00 2.17
3854 4250 4.134563 AGTGTCTGACGCCAACTAAAATT 58.865 39.130 17.11 0.00 0.00 1.82
3855 4251 3.740115 AGTGTCTGACGCCAACTAAAAT 58.260 40.909 17.11 0.00 0.00 1.82
3856 4252 3.188159 AGTGTCTGACGCCAACTAAAA 57.812 42.857 17.11 0.00 0.00 1.52
3857 4253 2.902705 AGTGTCTGACGCCAACTAAA 57.097 45.000 17.11 0.00 0.00 1.85
3858 4254 2.902705 AAGTGTCTGACGCCAACTAA 57.097 45.000 17.11 0.00 0.00 2.24
3859 4255 2.902705 AAAGTGTCTGACGCCAACTA 57.097 45.000 17.11 0.00 0.00 2.24
3860 4256 2.038387 AAAAGTGTCTGACGCCAACT 57.962 45.000 17.11 5.29 0.00 3.16
3861 4257 2.540973 GGAAAAAGTGTCTGACGCCAAC 60.541 50.000 17.11 2.95 0.00 3.77
3862 4258 1.673920 GGAAAAAGTGTCTGACGCCAA 59.326 47.619 17.11 0.00 0.00 4.52
3863 4259 1.134220 AGGAAAAAGTGTCTGACGCCA 60.134 47.619 17.11 0.00 0.00 5.69
3864 4260 1.594331 AGGAAAAAGTGTCTGACGCC 58.406 50.000 17.11 3.59 0.00 5.68
3865 4261 2.872858 AGAAGGAAAAAGTGTCTGACGC 59.127 45.455 13.27 13.27 0.00 5.19
3866 4262 4.024809 GGAAGAAGGAAAAAGTGTCTGACG 60.025 45.833 2.98 0.00 0.00 4.35
3867 4263 4.276183 GGGAAGAAGGAAAAAGTGTCTGAC 59.724 45.833 0.00 0.00 0.00 3.51
3868 4264 4.461198 GGGAAGAAGGAAAAAGTGTCTGA 58.539 43.478 0.00 0.00 0.00 3.27
3869 4265 3.251004 CGGGAAGAAGGAAAAAGTGTCTG 59.749 47.826 0.00 0.00 0.00 3.51
3870 4266 3.135895 TCGGGAAGAAGGAAAAAGTGTCT 59.864 43.478 0.00 0.00 0.00 3.41
3871 4267 3.473625 TCGGGAAGAAGGAAAAAGTGTC 58.526 45.455 0.00 0.00 0.00 3.67
3872 4268 3.570912 TCGGGAAGAAGGAAAAAGTGT 57.429 42.857 0.00 0.00 0.00 3.55
3873 4269 3.303791 CGTTCGGGAAGAAGGAAAAAGTG 60.304 47.826 0.00 0.00 44.92 3.16
3874 4270 2.876550 CGTTCGGGAAGAAGGAAAAAGT 59.123 45.455 0.00 0.00 44.92 2.66
3875 4271 3.135994 TCGTTCGGGAAGAAGGAAAAAG 58.864 45.455 1.45 0.00 46.77 2.27
3876 4272 3.196939 TCGTTCGGGAAGAAGGAAAAA 57.803 42.857 1.45 0.00 46.77 1.94
3877 4273 2.914695 TCGTTCGGGAAGAAGGAAAA 57.085 45.000 1.45 0.00 46.77 2.29
3881 4277 1.805945 CGCTCGTTCGGGAAGAAGG 60.806 63.158 0.00 0.00 43.85 3.46
3882 4278 0.388134 TTCGCTCGTTCGGGAAGAAG 60.388 55.000 0.00 0.00 39.95 2.85
3883 4279 0.032403 TTTCGCTCGTTCGGGAAGAA 59.968 50.000 0.00 0.00 37.20 2.52
3884 4280 0.245539 ATTTCGCTCGTTCGGGAAGA 59.754 50.000 0.00 0.00 37.20 2.87
3885 4281 0.370273 CATTTCGCTCGTTCGGGAAG 59.630 55.000 0.00 0.00 37.20 3.46
3886 4282 1.017177 CCATTTCGCTCGTTCGGGAA 61.017 55.000 0.00 0.00 34.55 3.97
3887 4283 1.447140 CCATTTCGCTCGTTCGGGA 60.447 57.895 0.00 0.00 0.00 5.14
3888 4284 1.017177 TTCCATTTCGCTCGTTCGGG 61.017 55.000 0.00 0.00 0.00 5.14
3889 4285 0.370273 CTTCCATTTCGCTCGTTCGG 59.630 55.000 0.00 0.00 0.00 4.30
3890 4286 0.370273 CCTTCCATTTCGCTCGTTCG 59.630 55.000 0.00 0.00 0.00 3.95
3891 4287 0.097150 GCCTTCCATTTCGCTCGTTC 59.903 55.000 0.00 0.00 0.00 3.95
3892 4288 1.305930 GGCCTTCCATTTCGCTCGTT 61.306 55.000 0.00 0.00 0.00 3.85
3893 4289 1.745489 GGCCTTCCATTTCGCTCGT 60.745 57.895 0.00 0.00 0.00 4.18
3894 4290 1.709147 CTGGCCTTCCATTTCGCTCG 61.709 60.000 3.32 0.00 42.51 5.03
3895 4291 0.392998 TCTGGCCTTCCATTTCGCTC 60.393 55.000 3.32 0.00 42.51 5.03
3896 4292 0.678048 GTCTGGCCTTCCATTTCGCT 60.678 55.000 3.32 0.00 42.51 4.93
3897 4293 1.657751 GGTCTGGCCTTCCATTTCGC 61.658 60.000 3.32 0.00 42.51 4.70
3898 4294 2.482326 GGTCTGGCCTTCCATTTCG 58.518 57.895 3.32 0.00 42.51 3.46
3909 4305 1.301677 CTTTTCTGGCGAGGTCTGGC 61.302 60.000 0.00 0.00 0.00 4.85
3910 4306 0.321671 TCTTTTCTGGCGAGGTCTGG 59.678 55.000 0.00 0.00 0.00 3.86
3911 4307 2.072298 CTTCTTTTCTGGCGAGGTCTG 58.928 52.381 0.00 0.00 0.00 3.51
3912 4308 1.609320 GCTTCTTTTCTGGCGAGGTCT 60.609 52.381 0.00 0.00 0.00 3.85
3913 4309 0.799393 GCTTCTTTTCTGGCGAGGTC 59.201 55.000 0.00 0.00 0.00 3.85
3914 4310 0.108585 TGCTTCTTTTCTGGCGAGGT 59.891 50.000 0.00 0.00 0.00 3.85
3915 4311 1.068954 GTTGCTTCTTTTCTGGCGAGG 60.069 52.381 0.00 0.00 0.00 4.63
3916 4312 1.068954 GGTTGCTTCTTTTCTGGCGAG 60.069 52.381 0.00 0.00 0.00 5.03
3917 4313 0.951558 GGTTGCTTCTTTTCTGGCGA 59.048 50.000 0.00 0.00 0.00 5.54
3918 4314 0.954452 AGGTTGCTTCTTTTCTGGCG 59.046 50.000 0.00 0.00 0.00 5.69
3919 4315 1.068954 CGAGGTTGCTTCTTTTCTGGC 60.069 52.381 0.00 0.00 0.00 4.85
3920 4316 1.537202 CCGAGGTTGCTTCTTTTCTGG 59.463 52.381 0.00 0.00 0.00 3.86
3921 4317 1.068954 GCCGAGGTTGCTTCTTTTCTG 60.069 52.381 0.00 0.00 0.00 3.02
3922 4318 1.239347 GCCGAGGTTGCTTCTTTTCT 58.761 50.000 0.00 0.00 0.00 2.52
3923 4319 0.951558 TGCCGAGGTTGCTTCTTTTC 59.048 50.000 0.00 0.00 0.00 2.29
3924 4320 1.398692 TTGCCGAGGTTGCTTCTTTT 58.601 45.000 0.00 0.00 0.00 2.27
3925 4321 1.338020 CTTTGCCGAGGTTGCTTCTTT 59.662 47.619 0.00 0.00 0.00 2.52
3926 4322 0.954452 CTTTGCCGAGGTTGCTTCTT 59.046 50.000 0.00 0.00 0.00 2.52
3927 4323 2.633860 CTTTGCCGAGGTTGCTTCT 58.366 52.632 0.00 0.00 0.00 2.85
4264 4660 2.084546 CTAAGCCCTGCACTGGTAAAC 58.915 52.381 0.00 0.00 0.00 2.01
4265 4661 1.982226 TCTAAGCCCTGCACTGGTAAA 59.018 47.619 0.00 0.00 0.00 2.01
4266 4662 1.651737 TCTAAGCCCTGCACTGGTAA 58.348 50.000 0.00 0.00 0.00 2.85
4267 4663 1.486310 CATCTAAGCCCTGCACTGGTA 59.514 52.381 0.00 0.00 0.00 3.25
4268 4664 0.254178 CATCTAAGCCCTGCACTGGT 59.746 55.000 0.00 0.00 0.00 4.00
4269 4665 0.465097 CCATCTAAGCCCTGCACTGG 60.465 60.000 0.00 0.00 0.00 4.00
4270 4666 0.543277 TCCATCTAAGCCCTGCACTG 59.457 55.000 0.00 0.00 0.00 3.66
4271 4667 1.142465 CATCCATCTAAGCCCTGCACT 59.858 52.381 0.00 0.00 0.00 4.40
4272 4668 1.602311 CATCCATCTAAGCCCTGCAC 58.398 55.000 0.00 0.00 0.00 4.57
4273 4669 0.475475 CCATCCATCTAAGCCCTGCA 59.525 55.000 0.00 0.00 0.00 4.41
4274 4670 0.892814 GCCATCCATCTAAGCCCTGC 60.893 60.000 0.00 0.00 0.00 4.85
4275 4671 0.251077 GGCCATCCATCTAAGCCCTG 60.251 60.000 0.00 0.00 37.66 4.45
4276 4672 1.772819 CGGCCATCCATCTAAGCCCT 61.773 60.000 2.24 0.00 40.65 5.19
4277 4673 1.302832 CGGCCATCCATCTAAGCCC 60.303 63.158 2.24 0.00 40.65 5.19
4278 4674 0.321122 CTCGGCCATCCATCTAAGCC 60.321 60.000 2.24 0.00 40.33 4.35
4279 4675 0.321122 CCTCGGCCATCCATCTAAGC 60.321 60.000 2.24 0.00 0.00 3.09
4280 4676 1.051812 ACCTCGGCCATCCATCTAAG 58.948 55.000 2.24 0.00 0.00 2.18
4281 4677 0.758734 CACCTCGGCCATCCATCTAA 59.241 55.000 2.24 0.00 0.00 2.10
4282 4678 1.121407 CCACCTCGGCCATCCATCTA 61.121 60.000 2.24 0.00 0.00 1.98
4283 4679 2.446848 CCACCTCGGCCATCCATCT 61.447 63.158 2.24 0.00 0.00 2.90
4284 4680 2.111878 CCACCTCGGCCATCCATC 59.888 66.667 2.24 0.00 0.00 3.51
4301 4697 2.309764 CTATTGTCGTTGCTGGCCGC 62.310 60.000 11.92 11.92 39.77 6.53
4302 4698 1.705337 CCTATTGTCGTTGCTGGCCG 61.705 60.000 0.00 0.00 0.00 6.13
4303 4699 1.376609 CCCTATTGTCGTTGCTGGCC 61.377 60.000 0.00 0.00 0.00 5.36
4304 4700 1.376609 CCCCTATTGTCGTTGCTGGC 61.377 60.000 0.00 0.00 0.00 4.85
4305 4701 0.748005 CCCCCTATTGTCGTTGCTGG 60.748 60.000 0.00 0.00 0.00 4.85
4306 4702 0.251916 TCCCCCTATTGTCGTTGCTG 59.748 55.000 0.00 0.00 0.00 4.41
4307 4703 0.541863 CTCCCCCTATTGTCGTTGCT 59.458 55.000 0.00 0.00 0.00 3.91
4308 4704 0.463833 CCTCCCCCTATTGTCGTTGC 60.464 60.000 0.00 0.00 0.00 4.17
4309 4705 0.909623 ACCTCCCCCTATTGTCGTTG 59.090 55.000 0.00 0.00 0.00 4.10
4310 4706 1.280998 CAACCTCCCCCTATTGTCGTT 59.719 52.381 0.00 0.00 0.00 3.85
4311 4707 0.909623 CAACCTCCCCCTATTGTCGT 59.090 55.000 0.00 0.00 0.00 4.34
4312 4708 1.139058 CTCAACCTCCCCCTATTGTCG 59.861 57.143 0.00 0.00 0.00 4.35
4313 4709 1.490910 CCTCAACCTCCCCCTATTGTC 59.509 57.143 0.00 0.00 0.00 3.18
4314 4710 1.596496 CCTCAACCTCCCCCTATTGT 58.404 55.000 0.00 0.00 0.00 2.71
4315 4711 0.846693 CCCTCAACCTCCCCCTATTG 59.153 60.000 0.00 0.00 0.00 1.90
4316 4712 0.328548 CCCCTCAACCTCCCCCTATT 60.329 60.000 0.00 0.00 0.00 1.73
4317 4713 1.243230 TCCCCTCAACCTCCCCCTAT 61.243 60.000 0.00 0.00 0.00 2.57
4318 4714 1.869946 TCCCCTCAACCTCCCCCTA 60.870 63.158 0.00 0.00 0.00 3.53
4319 4715 3.216371 TCCCCTCAACCTCCCCCT 61.216 66.667 0.00 0.00 0.00 4.79
4320 4716 2.692741 CTCCCCTCAACCTCCCCC 60.693 72.222 0.00 0.00 0.00 5.40
4321 4717 2.692741 CCTCCCCTCAACCTCCCC 60.693 72.222 0.00 0.00 0.00 4.81
4322 4718 2.692741 CCCTCCCCTCAACCTCCC 60.693 72.222 0.00 0.00 0.00 4.30
4323 4719 3.412408 GCCCTCCCCTCAACCTCC 61.412 72.222 0.00 0.00 0.00 4.30
4324 4720 2.610859 TGCCCTCCCCTCAACCTC 60.611 66.667 0.00 0.00 0.00 3.85
4325 4721 2.612115 CTGCCCTCCCCTCAACCT 60.612 66.667 0.00 0.00 0.00 3.50
4326 4722 3.732849 CCTGCCCTCCCCTCAACC 61.733 72.222 0.00 0.00 0.00 3.77
4327 4723 3.732849 CCCTGCCCTCCCCTCAAC 61.733 72.222 0.00 0.00 0.00 3.18
4340 4736 4.704833 CACCACCTCCACGCCCTG 62.705 72.222 0.00 0.00 0.00 4.45
4341 4737 4.954118 TCACCACCTCCACGCCCT 62.954 66.667 0.00 0.00 0.00 5.19
4342 4738 3.948719 TTCACCACCTCCACGCCC 61.949 66.667 0.00 0.00 0.00 6.13
4343 4739 2.668550 GTTCACCACCTCCACGCC 60.669 66.667 0.00 0.00 0.00 5.68
4344 4740 3.041940 CGTTCACCACCTCCACGC 61.042 66.667 0.00 0.00 0.00 5.34
4345 4741 1.808531 TACCGTTCACCACCTCCACG 61.809 60.000 0.00 0.00 0.00 4.94
4346 4742 0.037605 CTACCGTTCACCACCTCCAC 60.038 60.000 0.00 0.00 0.00 4.02
4347 4743 1.823169 GCTACCGTTCACCACCTCCA 61.823 60.000 0.00 0.00 0.00 3.86
4348 4744 1.079336 GCTACCGTTCACCACCTCC 60.079 63.158 0.00 0.00 0.00 4.30
4349 4745 1.445582 CGCTACCGTTCACCACCTC 60.446 63.158 0.00 0.00 0.00 3.85
4350 4746 2.654877 CGCTACCGTTCACCACCT 59.345 61.111 0.00 0.00 0.00 4.00
4351 4747 3.116531 GCGCTACCGTTCACCACC 61.117 66.667 0.00 0.00 36.67 4.61
4352 4748 3.116531 GGCGCTACCGTTCACCAC 61.117 66.667 7.64 0.00 36.67 4.16
4353 4749 4.382320 GGGCGCTACCGTTCACCA 62.382 66.667 7.64 0.00 40.62 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.