Multiple sequence alignment - TraesCS1B01G292300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G292300 chr1B 100.000 5240 0 0 1 5240 509886184 509891423 0.000000e+00 9677.0
1 TraesCS1B01G292300 chr1B 86.400 125 14 3 275 397 534738793 534738670 3.290000e-27 134.0
2 TraesCS1B01G292300 chr1D 93.409 3247 128 37 1655 4861 379793071 379796271 0.000000e+00 4732.0
3 TraesCS1B01G292300 chr1D 91.566 1079 23 22 644 1665 379789917 379790984 0.000000e+00 1426.0
4 TraesCS1B01G292300 chr1D 96.656 299 9 1 4921 5219 379796273 379796570 3.640000e-136 496.0
5 TraesCS1B01G292300 chr1D 96.078 51 1 1 2269 2318 379793729 379793779 1.210000e-11 82.4
6 TraesCS1B01G292300 chr1A 93.504 2386 84 19 2310 4689 480828621 480830941 0.000000e+00 3482.0
7 TraesCS1B01G292300 chr1A 93.545 914 22 19 648 1537 480826964 480827864 0.000000e+00 1327.0
8 TraesCS1B01G292300 chr1A 88.803 777 70 11 1547 2318 480827907 480828671 0.000000e+00 937.0
9 TraesCS1B01G292300 chr1A 91.429 490 23 12 4725 5211 480830935 480831408 0.000000e+00 654.0
10 TraesCS1B01G292300 chr1A 82.993 147 14 5 251 397 499452271 499452136 7.130000e-24 122.0
11 TraesCS1B01G292300 chr5A 93.361 241 14 2 1042 1282 613924496 613924734 6.450000e-94 355.0
12 TraesCS1B01G292300 chr5A 82.653 196 17 10 250 445 706934329 706934151 1.950000e-34 158.0
13 TraesCS1B01G292300 chr5A 82.667 150 12 8 214 362 706934232 706934096 2.560000e-23 121.0
14 TraesCS1B01G292300 chr5A 96.364 55 2 0 1547 1601 613925070 613925124 2.010000e-14 91.6
15 TraesCS1B01G292300 chr6A 87.755 294 25 8 251 540 147150857 147151143 3.020000e-87 333.0
16 TraesCS1B01G292300 chr6A 88.803 259 20 4 2 253 147150364 147150620 5.100000e-80 309.0
17 TraesCS1B01G292300 chr6A 88.961 154 15 2 3609 3761 562525393 562525545 6.930000e-44 189.0
18 TraesCS1B01G292300 chr6A 86.239 109 12 2 4 112 610861110 610861005 1.190000e-21 115.0
19 TraesCS1B01G292300 chr2D 80.482 456 61 17 15 464 305766512 305766945 1.820000e-84 324.0
20 TraesCS1B01G292300 chr5D 82.507 343 48 9 202 540 500929364 500929698 1.850000e-74 291.0
21 TraesCS1B01G292300 chr5D 79.825 228 30 8 232 459 351406990 351406779 9.090000e-33 152.0
22 TraesCS1B01G292300 chr7A 77.399 469 65 27 1 464 650593156 650592724 1.890000e-59 241.0
23 TraesCS1B01G292300 chr7A 89.032 155 15 2 3609 3762 83784986 83784833 1.930000e-44 191.0
24 TraesCS1B01G292300 chr7A 90.722 97 9 0 16 112 713519028 713518932 4.260000e-26 130.0
25 TraesCS1B01G292300 chr7A 90.722 97 9 0 16 112 713552635 713552539 4.260000e-26 130.0
26 TraesCS1B01G292300 chr7A 89.691 97 10 0 16 112 713324391 713324295 1.980000e-24 124.0
27 TraesCS1B01G292300 chr7A 89.691 97 10 0 16 112 713604197 713604101 1.980000e-24 124.0
28 TraesCS1B01G292300 chr6B 90.260 154 13 2 3609 3761 500227186 500227034 3.200000e-47 200.0
29 TraesCS1B01G292300 chr4D 89.677 155 14 2 3609 3762 482703473 482703626 4.140000e-46 196.0
30 TraesCS1B01G292300 chr4D 89.032 155 15 2 3609 3762 32017174 32017327 1.930000e-44 191.0
31 TraesCS1B01G292300 chr3B 77.841 352 54 12 191 540 761422943 761422614 4.140000e-46 196.0
32 TraesCS1B01G292300 chr3D 74.549 499 101 19 36 521 588148242 588148727 1.490000e-45 195.0
33 TraesCS1B01G292300 chr3D 87.654 162 16 3 3602 3761 422517828 422517987 8.960000e-43 185.0
34 TraesCS1B01G292300 chr2B 89.032 155 15 2 3609 3762 660461574 660461421 1.930000e-44 191.0
35 TraesCS1B01G292300 chr3A 90.722 97 9 0 16 112 646611651 646611747 4.260000e-26 130.0
36 TraesCS1B01G292300 chr3A 89.691 97 10 0 16 112 637535011 637535107 1.980000e-24 124.0
37 TraesCS1B01G292300 chr7D 90.909 44 1 2 3144 3187 478082800 478082760 7.330000e-04 56.5
38 TraesCS1B01G292300 chr5B 100.000 28 0 0 4875 4902 21431953 21431926 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G292300 chr1B 509886184 509891423 5239 False 9677.0 9677 100.00000 1 5240 1 chr1B.!!$F1 5239
1 TraesCS1B01G292300 chr1D 379789917 379796570 6653 False 1684.1 4732 94.42725 644 5219 4 chr1D.!!$F1 4575
2 TraesCS1B01G292300 chr1A 480826964 480831408 4444 False 1600.0 3482 91.82025 648 5211 4 chr1A.!!$F1 4563
3 TraesCS1B01G292300 chr5A 613924496 613925124 628 False 223.3 355 94.86250 1042 1601 2 chr5A.!!$F1 559
4 TraesCS1B01G292300 chr6A 147150364 147151143 779 False 321.0 333 88.27900 2 540 2 chr6A.!!$F2 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
626 873 0.102120 CAACCAAAGCAAAGGACGCA 59.898 50.000 0.0 0.0 0.00 5.24 F
627 874 0.385390 AACCAAAGCAAAGGACGCAG 59.615 50.000 0.0 0.0 0.00 5.18 F
628 875 0.465460 ACCAAAGCAAAGGACGCAGA 60.465 50.000 0.0 0.0 0.00 4.26 F
1812 4272 0.679640 TTACCATGCAAAGCCTCCGG 60.680 55.000 0.0 0.0 0.00 5.14 F
1818 4278 1.243902 TGCAAAGCCTCCGGTTTTAG 58.756 50.000 0.0 0.0 37.60 1.85 F
3612 6092 1.263217 GTCTTGCACGTTAGGGTGTTG 59.737 52.381 0.0 0.0 40.08 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1720 4179 0.455633 CAACGCCAGCTGCTGAATTC 60.456 55.000 30.10 14.48 38.05 2.17 R
1793 4253 0.679640 CCGGAGGCTTTGCATGGTAA 60.680 55.000 0.00 0.00 46.14 2.85 R
2070 4533 1.000385 CAGCGGTCCAAAAATCTTGCA 60.000 47.619 0.00 0.00 0.00 4.08 R
3709 6189 1.069935 GCATAGGTCCGGAGAAGGC 59.930 63.158 3.06 2.40 0.00 4.35 R
3725 6206 1.591703 CACGTAGCTCCCTCTTGCA 59.408 57.895 0.00 0.00 0.00 4.08 R
4588 7083 0.035317 TTCTGAACAGGCGTGCATCT 59.965 50.000 6.26 0.00 27.15 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 6.010294 AGAAGCAACATCTCATTGTCTTTG 57.990 37.500 0.00 0.00 0.00 2.77
50 51 6.076981 ACATCTCATTGTCTTTGGTTGTTC 57.923 37.500 0.00 0.00 0.00 3.18
71 72 5.599999 TCCTTCTCTAGTACTTTGATGCC 57.400 43.478 0.00 0.00 0.00 4.40
73 74 5.361285 TCCTTCTCTAGTACTTTGATGCCTC 59.639 44.000 0.00 0.00 0.00 4.70
163 164 3.066621 TCATGTTGTTTTGAGCACTGGTC 59.933 43.478 0.98 0.98 0.00 4.02
167 168 1.064758 TGTTTTGAGCACTGGTCTGGT 60.065 47.619 9.57 0.00 0.00 4.00
178 179 4.003648 CACTGGTCTGGTAAATGTTCTCC 58.996 47.826 0.00 0.00 0.00 3.71
179 180 3.262420 CTGGTCTGGTAAATGTTCTCCG 58.738 50.000 0.00 0.00 0.00 4.63
181 182 3.259902 GGTCTGGTAAATGTTCTCCGTC 58.740 50.000 0.00 0.00 0.00 4.79
182 183 3.259902 GTCTGGTAAATGTTCTCCGTCC 58.740 50.000 0.00 0.00 0.00 4.79
183 184 2.094390 TCTGGTAAATGTTCTCCGTCCG 60.094 50.000 0.00 0.00 0.00 4.79
189 196 2.225068 ATGTTCTCCGTCCGCAATAG 57.775 50.000 0.00 0.00 0.00 1.73
205 212 7.587757 GTCCGCAATAGCAAATATTTAGTTCAG 59.412 37.037 0.00 0.00 42.27 3.02
207 214 8.128582 CCGCAATAGCAAATATTTAGTTCAGAA 58.871 33.333 0.00 0.00 42.27 3.02
270 516 8.807948 AATACTACATGTTTCCAGTAGCATTT 57.192 30.769 2.30 0.00 38.98 2.32
312 558 2.439507 TGGACAAATGGCCTAGGAGATC 59.560 50.000 14.75 0.00 45.91 2.75
410 657 9.661563 CAGTAAATACTACCTACATGTTTCCAA 57.338 33.333 2.30 0.00 34.13 3.53
468 715 4.471904 TGTACCAGGAGATGATGTTGTC 57.528 45.455 0.00 0.00 0.00 3.18
471 718 4.213564 ACCAGGAGATGATGTTGTCTTC 57.786 45.455 0.00 0.00 0.00 2.87
478 725 5.353678 GGAGATGATGTTGTCTTCCTTCAAG 59.646 44.000 0.00 0.00 32.80 3.02
479 726 4.699257 AGATGATGTTGTCTTCCTTCAAGC 59.301 41.667 0.00 0.00 32.80 4.01
489 736 3.375922 TCTTCCTTCAAGCGAACGTTTTT 59.624 39.130 0.46 0.00 31.26 1.94
490 737 3.328237 TCCTTCAAGCGAACGTTTTTC 57.672 42.857 0.46 0.00 0.00 2.29
492 739 4.121317 TCCTTCAAGCGAACGTTTTTCTA 58.879 39.130 0.46 0.00 0.00 2.10
496 743 6.416750 CCTTCAAGCGAACGTTTTTCTATTTT 59.583 34.615 0.46 0.00 0.00 1.82
497 744 6.963017 TCAAGCGAACGTTTTTCTATTTTC 57.037 33.333 0.46 0.00 0.00 2.29
498 745 6.487960 TCAAGCGAACGTTTTTCTATTTTCA 58.512 32.000 0.46 0.00 0.00 2.69
500 747 5.209977 AGCGAACGTTTTTCTATTTTCACC 58.790 37.500 0.46 0.00 0.00 4.02
513 760 6.894828 TCTATTTTCACCGTTAACTTTGAGC 58.105 36.000 3.71 0.00 0.00 4.26
517 764 2.159382 CACCGTTAACTTTGAGCCCAT 58.841 47.619 3.71 0.00 0.00 4.00
521 768 3.081804 CGTTAACTTTGAGCCCATCCTT 58.918 45.455 3.71 0.00 0.00 3.36
525 772 3.463048 ACTTTGAGCCCATCCTTCATT 57.537 42.857 0.00 0.00 0.00 2.57
528 775 4.594491 ACTTTGAGCCCATCCTTCATTTTT 59.406 37.500 0.00 0.00 0.00 1.94
553 800 8.722480 TTTCATGAATTCTATATAGGGATGCG 57.278 34.615 9.40 0.00 0.00 4.73
554 801 7.423844 TCATGAATTCTATATAGGGATGCGT 57.576 36.000 9.89 2.68 0.00 5.24
555 802 8.533569 TCATGAATTCTATATAGGGATGCGTA 57.466 34.615 9.89 0.00 0.00 4.42
556 803 9.147732 TCATGAATTCTATATAGGGATGCGTAT 57.852 33.333 9.89 4.79 0.00 3.06
557 804 9.201127 CATGAATTCTATATAGGGATGCGTATG 57.799 37.037 9.89 1.99 0.00 2.39
558 805 8.306313 TGAATTCTATATAGGGATGCGTATGT 57.694 34.615 9.89 5.67 0.00 2.29
559 806 9.416284 TGAATTCTATATAGGGATGCGTATGTA 57.584 33.333 9.89 6.48 0.00 2.29
562 809 8.990163 TTCTATATAGGGATGCGTATGTATGA 57.010 34.615 9.89 4.88 0.00 2.15
563 810 8.622948 TCTATATAGGGATGCGTATGTATGAG 57.377 38.462 9.89 0.00 0.00 2.90
564 811 8.218488 TCTATATAGGGATGCGTATGTATGAGT 58.782 37.037 9.89 0.00 0.00 3.41
565 812 3.667497 AGGGATGCGTATGTATGAGTG 57.333 47.619 0.00 0.00 0.00 3.51
566 813 2.965831 AGGGATGCGTATGTATGAGTGT 59.034 45.455 0.00 0.00 0.00 3.55
567 814 3.388024 AGGGATGCGTATGTATGAGTGTT 59.612 43.478 0.00 0.00 0.00 3.32
568 815 4.127171 GGGATGCGTATGTATGAGTGTTT 58.873 43.478 0.00 0.00 0.00 2.83
569 816 4.024893 GGGATGCGTATGTATGAGTGTTTG 60.025 45.833 0.00 0.00 0.00 2.93
570 817 4.518217 GATGCGTATGTATGAGTGTTTGC 58.482 43.478 0.00 0.00 0.00 3.68
571 818 3.595173 TGCGTATGTATGAGTGTTTGCT 58.405 40.909 0.00 0.00 0.00 3.91
572 819 4.000325 TGCGTATGTATGAGTGTTTGCTT 59.000 39.130 0.00 0.00 0.00 3.91
573 820 4.454161 TGCGTATGTATGAGTGTTTGCTTT 59.546 37.500 0.00 0.00 0.00 3.51
574 821 5.049060 TGCGTATGTATGAGTGTTTGCTTTT 60.049 36.000 0.00 0.00 0.00 2.27
575 822 5.283717 GCGTATGTATGAGTGTTTGCTTTTG 59.716 40.000 0.00 0.00 0.00 2.44
576 823 6.370593 CGTATGTATGAGTGTTTGCTTTTGT 58.629 36.000 0.00 0.00 0.00 2.83
577 824 7.514805 CGTATGTATGAGTGTTTGCTTTTGTA 58.485 34.615 0.00 0.00 0.00 2.41
578 825 7.477422 CGTATGTATGAGTGTTTGCTTTTGTAC 59.523 37.037 0.00 0.00 0.00 2.90
579 826 5.743467 TGTATGAGTGTTTGCTTTTGTACG 58.257 37.500 0.00 0.00 0.00 3.67
580 827 3.684103 TGAGTGTTTGCTTTTGTACGG 57.316 42.857 0.00 0.00 0.00 4.02
581 828 3.011119 TGAGTGTTTGCTTTTGTACGGT 58.989 40.909 0.00 0.00 0.00 4.83
582 829 3.181505 TGAGTGTTTGCTTTTGTACGGTG 60.182 43.478 0.00 0.00 0.00 4.94
583 830 2.750712 AGTGTTTGCTTTTGTACGGTGT 59.249 40.909 0.00 0.00 0.00 4.16
584 831 3.191791 AGTGTTTGCTTTTGTACGGTGTT 59.808 39.130 0.00 0.00 0.00 3.32
585 832 4.395542 AGTGTTTGCTTTTGTACGGTGTTA 59.604 37.500 0.00 0.00 0.00 2.41
586 833 5.094134 GTGTTTGCTTTTGTACGGTGTTAA 58.906 37.500 0.00 0.00 0.00 2.01
587 834 5.572126 GTGTTTGCTTTTGTACGGTGTTAAA 59.428 36.000 0.00 0.00 0.00 1.52
588 835 6.089150 GTGTTTGCTTTTGTACGGTGTTAAAA 59.911 34.615 0.00 0.00 0.00 1.52
589 836 6.643770 TGTTTGCTTTTGTACGGTGTTAAAAA 59.356 30.769 0.00 0.00 0.00 1.94
590 837 6.872670 TTGCTTTTGTACGGTGTTAAAAAG 57.127 33.333 7.58 7.58 39.63 2.27
591 838 6.192234 TGCTTTTGTACGGTGTTAAAAAGA 57.808 33.333 13.53 1.08 39.21 2.52
592 839 6.618811 TGCTTTTGTACGGTGTTAAAAAGAA 58.381 32.000 13.53 3.61 39.21 2.52
593 840 7.088905 TGCTTTTGTACGGTGTTAAAAAGAAA 58.911 30.769 13.53 2.24 39.21 2.52
594 841 7.597743 TGCTTTTGTACGGTGTTAAAAAGAAAA 59.402 29.630 13.53 3.17 39.21 2.29
595 842 8.433893 GCTTTTGTACGGTGTTAAAAAGAAAAA 58.566 29.630 13.53 0.00 39.21 1.94
599 846 9.733219 TTGTACGGTGTTAAAAAGAAAAATAGG 57.267 29.630 0.00 0.00 0.00 2.57
600 847 9.118300 TGTACGGTGTTAAAAAGAAAAATAGGA 57.882 29.630 0.00 0.00 0.00 2.94
601 848 9.603298 GTACGGTGTTAAAAAGAAAAATAGGAG 57.397 33.333 0.00 0.00 0.00 3.69
602 849 7.143340 ACGGTGTTAAAAAGAAAAATAGGAGC 58.857 34.615 0.00 0.00 0.00 4.70
603 850 7.142680 CGGTGTTAAAAAGAAAAATAGGAGCA 58.857 34.615 0.00 0.00 0.00 4.26
604 851 7.114388 CGGTGTTAAAAAGAAAAATAGGAGCAC 59.886 37.037 0.00 0.00 0.00 4.40
605 852 7.923878 GGTGTTAAAAAGAAAAATAGGAGCACA 59.076 33.333 0.00 0.00 0.00 4.57
606 853 8.968242 GTGTTAAAAAGAAAAATAGGAGCACAG 58.032 33.333 0.00 0.00 0.00 3.66
607 854 7.651704 TGTTAAAAAGAAAAATAGGAGCACAGC 59.348 33.333 0.00 0.00 0.00 4.40
608 855 5.789643 AAAAGAAAAATAGGAGCACAGCA 57.210 34.783 0.00 0.00 0.00 4.41
609 856 5.789643 AAAGAAAAATAGGAGCACAGCAA 57.210 34.783 0.00 0.00 0.00 3.91
610 857 4.773323 AGAAAAATAGGAGCACAGCAAC 57.227 40.909 0.00 0.00 0.00 4.17
611 858 3.507622 AGAAAAATAGGAGCACAGCAACC 59.492 43.478 0.00 0.00 0.00 3.77
612 859 2.584835 AAATAGGAGCACAGCAACCA 57.415 45.000 7.67 0.00 31.94 3.67
613 860 2.584835 AATAGGAGCACAGCAACCAA 57.415 45.000 7.67 0.00 31.94 3.67
614 861 2.584835 ATAGGAGCACAGCAACCAAA 57.415 45.000 7.67 0.00 31.94 3.28
615 862 1.896220 TAGGAGCACAGCAACCAAAG 58.104 50.000 7.67 0.00 31.94 2.77
616 863 1.006922 GGAGCACAGCAACCAAAGC 60.007 57.895 0.00 0.00 0.00 3.51
617 864 1.735360 GAGCACAGCAACCAAAGCA 59.265 52.632 0.00 0.00 0.00 3.91
618 865 0.102844 GAGCACAGCAACCAAAGCAA 59.897 50.000 0.00 0.00 0.00 3.91
619 866 0.536260 AGCACAGCAACCAAAGCAAA 59.464 45.000 0.00 0.00 0.00 3.68
620 867 0.932399 GCACAGCAACCAAAGCAAAG 59.068 50.000 0.00 0.00 0.00 2.77
621 868 1.574134 CACAGCAACCAAAGCAAAGG 58.426 50.000 0.00 0.00 0.00 3.11
622 869 1.136695 CACAGCAACCAAAGCAAAGGA 59.863 47.619 0.00 0.00 0.00 3.36
623 870 1.136891 ACAGCAACCAAAGCAAAGGAC 59.863 47.619 0.00 0.00 0.00 3.85
624 871 0.385390 AGCAACCAAAGCAAAGGACG 59.615 50.000 0.00 0.00 0.00 4.79
625 872 1.215014 GCAACCAAAGCAAAGGACGC 61.215 55.000 0.00 0.00 0.00 5.19
626 873 0.102120 CAACCAAAGCAAAGGACGCA 59.898 50.000 0.00 0.00 0.00 5.24
627 874 0.385390 AACCAAAGCAAAGGACGCAG 59.615 50.000 0.00 0.00 0.00 5.18
628 875 0.465460 ACCAAAGCAAAGGACGCAGA 60.465 50.000 0.00 0.00 0.00 4.26
629 876 0.883833 CCAAAGCAAAGGACGCAGAT 59.116 50.000 0.00 0.00 0.00 2.90
630 877 1.270550 CCAAAGCAAAGGACGCAGATT 59.729 47.619 0.00 0.00 0.00 2.40
631 878 2.589014 CAAAGCAAAGGACGCAGATTC 58.411 47.619 0.00 0.00 0.00 2.52
632 879 2.191128 AAGCAAAGGACGCAGATTCT 57.809 45.000 0.00 0.00 0.00 2.40
633 880 1.446907 AGCAAAGGACGCAGATTCTG 58.553 50.000 9.40 9.40 34.12 3.02
752 1008 2.720134 GCTGCGCCTCTCCTTCTCT 61.720 63.158 4.18 0.00 0.00 3.10
753 1009 1.437160 CTGCGCCTCTCCTTCTCTC 59.563 63.158 4.18 0.00 0.00 3.20
761 1017 3.684628 TCCTTCTCTCCCCCGCCT 61.685 66.667 0.00 0.00 0.00 5.52
1035 1314 2.110967 CCTGACGCTGCCCATCTTG 61.111 63.158 0.00 0.00 0.00 3.02
1354 1664 4.560128 GTTCTTGCAGAATTTTCCCTTCC 58.440 43.478 2.61 0.00 36.50 3.46
1395 1713 2.100991 CTTCAAATGCCGCGCCTC 59.899 61.111 0.00 0.00 0.00 4.70
1683 4142 5.360714 AGTGTTATCCATGGCCATTAAACAG 59.639 40.000 17.92 3.10 0.00 3.16
1720 4179 5.695851 ATTAGCAAACCAAAGTGACTCTG 57.304 39.130 0.00 0.00 0.00 3.35
1745 4205 1.063166 GCAGCTGGCGTTGCTAATC 59.937 57.895 17.12 0.00 43.15 1.75
1750 4210 2.558359 AGCTGGCGTTGCTAATCTTTTT 59.442 40.909 0.00 0.00 39.21 1.94
1751 4211 2.917343 GCTGGCGTTGCTAATCTTTTTC 59.083 45.455 0.00 0.00 0.00 2.29
1754 4214 5.545658 TGGCGTTGCTAATCTTTTTCTAG 57.454 39.130 0.00 0.00 0.00 2.43
1782 4242 3.297134 CCTGGTGGGTATTGCACTATT 57.703 47.619 0.00 0.00 0.00 1.73
1783 4243 2.951642 CCTGGTGGGTATTGCACTATTG 59.048 50.000 0.00 0.00 0.00 1.90
1812 4272 0.679640 TTACCATGCAAAGCCTCCGG 60.680 55.000 0.00 0.00 0.00 5.14
1818 4278 1.243902 TGCAAAGCCTCCGGTTTTAG 58.756 50.000 0.00 0.00 37.60 1.85
1820 4280 1.905637 CAAAGCCTCCGGTTTTAGGT 58.094 50.000 0.00 0.00 37.60 3.08
1821 4281 2.235891 CAAAGCCTCCGGTTTTAGGTT 58.764 47.619 0.00 0.00 37.60 3.50
1851 4311 5.916318 TCTTGCATTTTCCAAAGTGAATGT 58.084 33.333 0.00 0.00 33.25 2.71
1860 4320 2.287547 CCAAAGTGAATGTGACGGTTGG 60.288 50.000 0.00 0.00 31.34 3.77
1867 4327 5.046878 AGTGAATGTGACGGTTGGATACTTA 60.047 40.000 0.00 0.00 37.61 2.24
1897 4359 8.871862 GCAGATAAATAGATAGCATTCTGTGAG 58.128 37.037 0.00 0.00 33.57 3.51
1910 4372 7.504403 AGCATTCTGTGAGTATAGCTATTTGT 58.496 34.615 12.39 0.00 0.00 2.83
1927 4389 3.931907 TTGTCCTCTTCCCATGGTATG 57.068 47.619 11.73 0.00 0.00 2.39
1928 4390 2.845659 TGTCCTCTTCCCATGGTATGT 58.154 47.619 11.73 0.00 0.00 2.29
1967 4429 6.961576 TCCCTTTATTAGTTCGTTTTGTGTG 58.038 36.000 0.00 0.00 0.00 3.82
1971 4433 8.018520 CCTTTATTAGTTCGTTTTGTGTGCATA 58.981 33.333 0.00 0.00 0.00 3.14
1981 4443 4.822036 TTTGTGTGCATAGGTGTGTTAC 57.178 40.909 0.00 0.00 0.00 2.50
1990 4452 2.825861 AGGTGTGTTACAACGGTAGG 57.174 50.000 0.00 0.00 41.63 3.18
1997 4459 2.037381 TGTTACAACGGTAGGCATCACA 59.963 45.455 0.00 0.00 0.00 3.58
2097 4560 1.398692 TTTTGGACCGCTGCTTCTTT 58.601 45.000 0.00 0.00 0.00 2.52
2098 4561 1.398692 TTTGGACCGCTGCTTCTTTT 58.601 45.000 0.00 0.00 0.00 2.27
2148 4611 5.500825 GCAAATTGCTTTGTGGTGTTAAAG 58.499 37.500 11.19 0.00 43.07 1.85
2164 4627 4.578928 TGTTAAAGGAAGAGTTTGCTGTCC 59.421 41.667 0.00 0.00 34.94 4.02
2229 4705 5.234466 TGTACCAAAAATGGGGAAAATGG 57.766 39.130 0.00 0.00 0.00 3.16
2254 4730 3.073062 GGGAGATTAGCTTAGCATGGGAA 59.927 47.826 7.07 0.00 0.00 3.97
2282 4758 4.487714 TGAGGTGGGAGTAAATAAGCAG 57.512 45.455 0.00 0.00 0.00 4.24
2332 4808 5.044476 TGGAGTAAATAAGCAGGGAAATCCA 60.044 40.000 1.22 0.00 38.24 3.41
2386 4862 6.238103 CCGTGACGATAGCTGACAAAAATTAT 60.238 38.462 6.54 0.00 42.67 1.28
2700 5176 3.781079 TGTATGCTGTAATTGCAAGCC 57.219 42.857 4.94 0.00 44.01 4.35
2764 5240 7.418942 GCAAATATGATTTCTTGGGGTGGTATT 60.419 37.037 0.00 0.00 0.00 1.89
3475 5955 8.797438 TCCACAAGTTTGCACATTTGTATATTA 58.203 29.630 12.65 0.00 32.86 0.98
3551 6031 7.552330 TGCTAAATTCTCACATGTAGTTATGCA 59.448 33.333 0.00 2.96 0.00 3.96
3612 6092 1.263217 GTCTTGCACGTTAGGGTGTTG 59.737 52.381 0.00 0.00 40.08 3.33
3680 6160 6.096282 CCTTTTGCGGAAATATAGGGAAAGAA 59.904 38.462 1.94 0.00 0.00 2.52
3725 6206 3.135027 GAGCCTTCTCCGGACCTAT 57.865 57.895 0.00 0.00 33.19 2.57
3781 6262 7.706179 CCTTTTTGCACATTAGGGTGTTATATG 59.294 37.037 0.00 0.00 40.89 1.78
3813 6294 4.451900 ACTCAAACTGTGGAAACAGGTAG 58.548 43.478 10.40 2.11 44.46 3.18
3817 6298 4.706842 AACTGTGGAAACAGGTAGTCAT 57.293 40.909 10.40 0.00 44.46 3.06
3844 6325 1.425066 AGTTCACCTCCCTTCATTGCA 59.575 47.619 0.00 0.00 0.00 4.08
3887 6368 7.422399 AGTTAGTGCATTAAATTGAACAACGT 58.578 30.769 2.90 0.00 29.18 3.99
3917 6403 6.618287 TGCATGTATTCATAGTTAAGCACC 57.382 37.500 0.00 0.00 32.47 5.01
4020 6513 2.325761 CCGCTTCCCGAACTATAATCG 58.674 52.381 1.58 1.58 40.02 3.34
4048 6541 3.305403 GCTTGGTTGCTTTCTTAACCCTC 60.305 47.826 0.00 0.00 44.48 4.30
4082 6575 7.817478 TCGTGTGTTATATGTTCTGATGTTTCT 59.183 33.333 0.00 0.00 0.00 2.52
4154 6647 4.375272 CCAGTATCAGTCAATACAGGCAG 58.625 47.826 0.00 0.00 33.63 4.85
4176 6669 1.520787 CCTACGGTTCCGTGCATCC 60.521 63.158 24.37 0.00 42.91 3.51
4302 6796 2.719531 TCAAGTGCCCAAAGTGTACA 57.280 45.000 0.00 0.00 0.00 2.90
4323 6817 4.463891 ACAATTTCTGAGCCATTTCGGATT 59.536 37.500 0.00 0.00 36.56 3.01
4402 6896 5.290493 ACATGCGGATCCAGAAGTATTTA 57.710 39.130 13.41 0.00 0.00 1.40
4418 6912 4.470304 AGTATTTACACCTCTCCAGGGTTC 59.530 45.833 0.00 0.00 45.53 3.62
4446 6940 3.067180 TGAGATGGTCGTATTTCCGGTAC 59.933 47.826 0.00 0.00 0.00 3.34
4530 7025 6.859017 AGTTTAACCCTTGTGTTGTAAAGTG 58.141 36.000 0.00 0.00 0.00 3.16
4597 7092 1.419874 GCAGAGACTGAGATGCACGC 61.420 60.000 2.81 0.00 38.54 5.34
4615 7110 2.484264 ACGCCTGTTCAGAAGTAAATGC 59.516 45.455 1.00 0.00 0.00 3.56
4621 7116 5.047802 CCTGTTCAGAAGTAAATGCCACATT 60.048 40.000 1.00 0.00 0.00 2.71
4631 7126 6.795399 AGTAAATGCCACATTTGCTGTATAC 58.205 36.000 18.69 7.13 35.91 1.47
4632 7127 5.657826 AAATGCCACATTTGCTGTATACA 57.342 34.783 5.25 5.25 35.91 2.29
4633 7128 4.637483 ATGCCACATTTGCTGTATACAC 57.363 40.909 0.08 0.16 35.91 2.90
4634 7129 3.684908 TGCCACATTTGCTGTATACACT 58.315 40.909 0.08 0.00 35.91 3.55
4655 7150 8.375608 ACACTCATCTGCAATTACATTATCTC 57.624 34.615 0.00 0.00 0.00 2.75
4696 7191 3.058914 GCTGTGCAGTAAAAATGACTCGT 60.059 43.478 0.00 0.00 0.00 4.18
4697 7192 4.702392 CTGTGCAGTAAAAATGACTCGTC 58.298 43.478 0.00 0.00 0.00 4.20
4698 7193 4.123506 TGTGCAGTAAAAATGACTCGTCA 58.876 39.130 1.79 1.79 44.59 4.35
4699 7194 4.211164 TGTGCAGTAAAAATGACTCGTCAG 59.789 41.667 5.91 0.00 43.61 3.51
4700 7195 4.447724 GTGCAGTAAAAATGACTCGTCAGA 59.552 41.667 5.91 0.00 43.61 3.27
4702 7197 5.177511 TGCAGTAAAAATGACTCGTCAGAAG 59.822 40.000 5.91 0.00 43.61 2.85
4703 7198 5.177696 GCAGTAAAAATGACTCGTCAGAAGT 59.822 40.000 5.91 0.00 43.61 3.01
4704 7199 6.584954 CAGTAAAAATGACTCGTCAGAAGTG 58.415 40.000 5.91 0.00 43.61 3.16
4741 7237 7.339466 ACATCTTGTGTAAAAACCAAGAGAAGT 59.661 33.333 7.32 3.86 39.91 3.01
4786 7282 3.272364 TAAGGCTGGTGCTGGGCAG 62.272 63.158 0.00 0.00 40.08 4.85
4831 7334 4.006319 AGTAGCCAACAAGCAATCTTCTC 58.994 43.478 0.00 0.00 34.23 2.87
4867 7370 8.788409 GCTTTGTGCAGATTAATTTATACTCC 57.212 34.615 0.00 0.00 42.31 3.85
4868 7371 7.587757 GCTTTGTGCAGATTAATTTATACTCCG 59.412 37.037 0.00 0.00 42.31 4.63
4869 7372 8.500753 TTTGTGCAGATTAATTTATACTCCGT 57.499 30.769 0.00 0.00 0.00 4.69
4870 7373 9.602568 TTTGTGCAGATTAATTTATACTCCGTA 57.397 29.630 0.00 0.00 0.00 4.02
4871 7374 8.583810 TGTGCAGATTAATTTATACTCCGTAC 57.416 34.615 0.00 0.00 0.00 3.67
4872 7375 8.418662 TGTGCAGATTAATTTATACTCCGTACT 58.581 33.333 0.00 0.00 0.00 2.73
4873 7376 9.903682 GTGCAGATTAATTTATACTCCGTACTA 57.096 33.333 0.00 0.00 0.00 1.82
4874 7377 9.903682 TGCAGATTAATTTATACTCCGTACTAC 57.096 33.333 0.00 0.00 0.00 2.73
4881 7384 6.604735 TTTATACTCCGTACTACTTCGTCC 57.395 41.667 0.00 0.00 0.00 4.79
4882 7385 1.743996 ACTCCGTACTACTTCGTCCC 58.256 55.000 0.00 0.00 0.00 4.46
4883 7386 1.003580 ACTCCGTACTACTTCGTCCCA 59.996 52.381 0.00 0.00 0.00 4.37
4884 7387 1.399791 CTCCGTACTACTTCGTCCCAC 59.600 57.143 0.00 0.00 0.00 4.61
4885 7388 1.167851 CCGTACTACTTCGTCCCACA 58.832 55.000 0.00 0.00 0.00 4.17
4886 7389 1.541147 CCGTACTACTTCGTCCCACAA 59.459 52.381 0.00 0.00 0.00 3.33
4887 7390 2.165030 CCGTACTACTTCGTCCCACAAT 59.835 50.000 0.00 0.00 0.00 2.71
4888 7391 3.176708 CGTACTACTTCGTCCCACAATG 58.823 50.000 0.00 0.00 0.00 2.82
4889 7392 3.366679 CGTACTACTTCGTCCCACAATGT 60.367 47.826 0.00 0.00 0.00 2.71
4890 7393 4.142622 CGTACTACTTCGTCCCACAATGTA 60.143 45.833 0.00 0.00 0.00 2.29
4891 7394 4.877378 ACTACTTCGTCCCACAATGTAA 57.123 40.909 0.00 0.00 0.00 2.41
4892 7395 4.817517 ACTACTTCGTCCCACAATGTAAG 58.182 43.478 0.00 0.00 0.00 2.34
4893 7396 4.525487 ACTACTTCGTCCCACAATGTAAGA 59.475 41.667 0.00 0.00 0.00 2.10
4894 7397 4.553330 ACTTCGTCCCACAATGTAAGAT 57.447 40.909 0.00 0.00 0.00 2.40
4895 7398 4.253685 ACTTCGTCCCACAATGTAAGATG 58.746 43.478 0.00 0.00 0.00 2.90
4896 7399 3.973206 TCGTCCCACAATGTAAGATGT 57.027 42.857 0.00 0.00 0.00 3.06
4897 7400 4.280436 TCGTCCCACAATGTAAGATGTT 57.720 40.909 0.00 0.00 0.00 2.71
4898 7401 4.647611 TCGTCCCACAATGTAAGATGTTT 58.352 39.130 0.00 0.00 0.00 2.83
4899 7402 5.067273 TCGTCCCACAATGTAAGATGTTTT 58.933 37.500 0.00 0.00 0.00 2.43
4900 7403 5.180492 TCGTCCCACAATGTAAGATGTTTTC 59.820 40.000 0.00 0.00 0.00 2.29
4901 7404 5.181245 CGTCCCACAATGTAAGATGTTTTCT 59.819 40.000 0.00 0.00 35.70 2.52
4902 7405 6.293955 CGTCCCACAATGTAAGATGTTTTCTT 60.294 38.462 0.00 0.00 46.53 2.52
4903 7406 7.433680 GTCCCACAATGTAAGATGTTTTCTTT 58.566 34.615 0.00 0.00 42.15 2.52
4904 7407 7.926018 GTCCCACAATGTAAGATGTTTTCTTTT 59.074 33.333 0.00 0.00 42.15 2.27
4905 7408 9.137459 TCCCACAATGTAAGATGTTTTCTTTTA 57.863 29.630 0.00 0.00 42.15 1.52
4906 7409 9.927668 CCCACAATGTAAGATGTTTTCTTTTAT 57.072 29.630 0.00 0.00 42.15 1.40
4909 7412 9.128107 ACAATGTAAGATGTTTTCTTTTATGCG 57.872 29.630 0.00 0.00 42.15 4.73
4910 7413 9.340695 CAATGTAAGATGTTTTCTTTTATGCGA 57.659 29.630 0.00 0.00 42.15 5.10
4911 7414 8.895932 ATGTAAGATGTTTTCTTTTATGCGAC 57.104 30.769 0.00 0.00 42.15 5.19
4912 7415 7.012943 TGTAAGATGTTTTCTTTTATGCGACG 58.987 34.615 0.00 0.00 42.15 5.12
4913 7416 4.969816 AGATGTTTTCTTTTATGCGACGG 58.030 39.130 0.00 0.00 0.00 4.79
4914 7417 4.693566 AGATGTTTTCTTTTATGCGACGGA 59.306 37.500 0.00 0.00 0.00 4.69
4915 7418 4.398549 TGTTTTCTTTTATGCGACGGAG 57.601 40.909 0.00 0.00 0.00 4.63
4916 7419 3.187637 TGTTTTCTTTTATGCGACGGAGG 59.812 43.478 0.00 0.00 0.00 4.30
4917 7420 2.018542 TTCTTTTATGCGACGGAGGG 57.981 50.000 0.00 0.00 0.00 4.30
4918 7421 1.187974 TCTTTTATGCGACGGAGGGA 58.812 50.000 0.00 0.00 0.00 4.20
4919 7422 1.136305 TCTTTTATGCGACGGAGGGAG 59.864 52.381 0.00 0.00 0.00 4.30
5099 7651 0.251077 CTTCCTCTTTGGTGGCAGCT 60.251 55.000 18.53 0.00 37.07 4.24
5199 7751 9.284968 CAAGGGTACTACAAAATGGATAATAGG 57.715 37.037 0.00 0.00 0.00 2.57
5219 7771 5.339008 AGGCATGATACGTAGTTCTCAAA 57.661 39.130 0.08 0.00 37.78 2.69
5220 7772 5.918608 AGGCATGATACGTAGTTCTCAAAT 58.081 37.500 0.08 0.00 37.78 2.32
5221 7773 5.986135 AGGCATGATACGTAGTTCTCAAATC 59.014 40.000 0.08 0.00 37.78 2.17
5222 7774 5.986135 GGCATGATACGTAGTTCTCAAATCT 59.014 40.000 0.08 0.00 37.78 2.40
5223 7775 7.014326 AGGCATGATACGTAGTTCTCAAATCTA 59.986 37.037 0.08 0.00 37.78 1.98
5224 7776 7.815068 GGCATGATACGTAGTTCTCAAATCTAT 59.185 37.037 0.08 0.00 37.78 1.98
5225 7777 9.197694 GCATGATACGTAGTTCTCAAATCTATT 57.802 33.333 0.08 0.00 37.78 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 6.756221 TCAAAGTACTAGAGAAGGAACAACC 58.244 40.000 0.00 0.00 39.35 3.77
50 51 5.596845 GAGGCATCAAAGTACTAGAGAAGG 58.403 45.833 0.00 0.00 0.00 3.46
71 72 5.642063 AGGTTAATACAATTCACACACCGAG 59.358 40.000 0.00 0.00 0.00 4.63
73 74 5.873179 AGGTTAATACAATTCACACACCG 57.127 39.130 0.00 0.00 0.00 4.94
107 108 9.776158 CAACACAAACACTAGTAACATGTTTAA 57.224 29.630 17.78 0.00 43.02 1.52
139 140 4.099881 ACCAGTGCTCAAAACAACATGAAT 59.900 37.500 0.00 0.00 0.00 2.57
148 149 1.680338 ACCAGACCAGTGCTCAAAAC 58.320 50.000 0.00 0.00 0.00 2.43
163 164 2.268298 CGGACGGAGAACATTTACCAG 58.732 52.381 0.00 0.00 0.00 4.00
167 168 2.459060 TTGCGGACGGAGAACATTTA 57.541 45.000 0.00 0.00 0.00 1.40
178 179 5.985781 ACTAAATATTTGCTATTGCGGACG 58.014 37.500 11.05 0.00 43.34 4.79
179 180 7.414436 TGAACTAAATATTTGCTATTGCGGAC 58.586 34.615 11.05 0.00 43.34 4.79
181 182 7.639039 TCTGAACTAAATATTTGCTATTGCGG 58.361 34.615 11.05 0.20 43.34 5.69
182 183 9.669353 ATTCTGAACTAAATATTTGCTATTGCG 57.331 29.630 11.05 0.00 43.34 4.85
237 244 9.959721 ACTGGAAACATGTAGTATTTACTGAAT 57.040 29.630 0.00 0.00 41.51 2.57
270 516 4.440880 CAAATGTGCTCAAACTTTCCCAA 58.559 39.130 0.00 0.00 0.00 4.12
395 642 8.768397 TCAGAATACTATTGGAAACATGTAGGT 58.232 33.333 0.00 0.00 42.32 3.08
396 643 9.265901 CTCAGAATACTATTGGAAACATGTAGG 57.734 37.037 0.00 0.00 42.32 3.18
410 657 8.097038 TGTGCTGAAACTTTCTCAGAATACTAT 58.903 33.333 4.06 0.00 42.51 2.12
468 715 3.334272 AAAACGTTCGCTTGAAGGAAG 57.666 42.857 0.00 0.00 39.29 3.46
471 718 3.334272 AGAAAAACGTTCGCTTGAAGG 57.666 42.857 0.00 0.00 41.92 3.46
478 725 4.086105 CGGTGAAAATAGAAAAACGTTCGC 59.914 41.667 0.00 0.00 0.00 4.70
479 726 5.199726 ACGGTGAAAATAGAAAAACGTTCG 58.800 37.500 0.00 0.00 0.00 3.95
489 736 6.072893 GGCTCAAAGTTAACGGTGAAAATAGA 60.073 38.462 13.19 0.00 0.00 1.98
490 737 6.084277 GGCTCAAAGTTAACGGTGAAAATAG 58.916 40.000 13.19 5.18 0.00 1.73
492 739 4.261867 GGGCTCAAAGTTAACGGTGAAAAT 60.262 41.667 13.19 0.00 0.00 1.82
496 743 1.141254 TGGGCTCAAAGTTAACGGTGA 59.859 47.619 12.05 12.05 0.00 4.02
497 744 1.600023 TGGGCTCAAAGTTAACGGTG 58.400 50.000 0.00 2.70 0.00 4.94
498 745 2.433436 GATGGGCTCAAAGTTAACGGT 58.567 47.619 0.00 0.00 0.00 4.83
500 747 2.711542 AGGATGGGCTCAAAGTTAACG 58.288 47.619 0.00 0.00 0.00 3.18
528 775 8.321353 ACGCATCCCTATATAGAATTCATGAAA 58.679 33.333 13.09 0.00 0.00 2.69
531 778 9.201127 CATACGCATCCCTATATAGAATTCATG 57.799 37.037 11.53 6.64 0.00 3.07
532 779 8.928448 ACATACGCATCCCTATATAGAATTCAT 58.072 33.333 11.53 2.21 0.00 2.57
540 787 7.778382 ACACTCATACATACGCATCCCTATATA 59.222 37.037 0.00 0.00 0.00 0.86
541 788 6.607600 ACACTCATACATACGCATCCCTATAT 59.392 38.462 0.00 0.00 0.00 0.86
542 789 5.949952 ACACTCATACATACGCATCCCTATA 59.050 40.000 0.00 0.00 0.00 1.31
543 790 4.772624 ACACTCATACATACGCATCCCTAT 59.227 41.667 0.00 0.00 0.00 2.57
544 791 4.149598 ACACTCATACATACGCATCCCTA 58.850 43.478 0.00 0.00 0.00 3.53
545 792 2.965831 ACACTCATACATACGCATCCCT 59.034 45.455 0.00 0.00 0.00 4.20
546 793 3.386768 ACACTCATACATACGCATCCC 57.613 47.619 0.00 0.00 0.00 3.85
547 794 4.552767 GCAAACACTCATACATACGCATCC 60.553 45.833 0.00 0.00 0.00 3.51
548 795 4.271049 AGCAAACACTCATACATACGCATC 59.729 41.667 0.00 0.00 0.00 3.91
549 796 4.191544 AGCAAACACTCATACATACGCAT 58.808 39.130 0.00 0.00 0.00 4.73
550 797 3.595173 AGCAAACACTCATACATACGCA 58.405 40.909 0.00 0.00 0.00 5.24
551 798 4.600012 AAGCAAACACTCATACATACGC 57.400 40.909 0.00 0.00 0.00 4.42
552 799 6.370593 ACAAAAGCAAACACTCATACATACG 58.629 36.000 0.00 0.00 0.00 3.06
553 800 7.477422 CGTACAAAAGCAAACACTCATACATAC 59.523 37.037 0.00 0.00 0.00 2.39
554 801 7.360522 CCGTACAAAAGCAAACACTCATACATA 60.361 37.037 0.00 0.00 0.00 2.29
555 802 6.370593 CGTACAAAAGCAAACACTCATACAT 58.629 36.000 0.00 0.00 0.00 2.29
556 803 5.277586 CCGTACAAAAGCAAACACTCATACA 60.278 40.000 0.00 0.00 0.00 2.29
557 804 5.144359 CCGTACAAAAGCAAACACTCATAC 58.856 41.667 0.00 0.00 0.00 2.39
558 805 4.817464 ACCGTACAAAAGCAAACACTCATA 59.183 37.500 0.00 0.00 0.00 2.15
559 806 3.630312 ACCGTACAAAAGCAAACACTCAT 59.370 39.130 0.00 0.00 0.00 2.90
560 807 3.011119 ACCGTACAAAAGCAAACACTCA 58.989 40.909 0.00 0.00 0.00 3.41
561 808 3.181504 ACACCGTACAAAAGCAAACACTC 60.182 43.478 0.00 0.00 0.00 3.51
562 809 2.750712 ACACCGTACAAAAGCAAACACT 59.249 40.909 0.00 0.00 0.00 3.55
563 810 3.139603 ACACCGTACAAAAGCAAACAC 57.860 42.857 0.00 0.00 0.00 3.32
564 811 3.851976 AACACCGTACAAAAGCAAACA 57.148 38.095 0.00 0.00 0.00 2.83
565 812 6.629182 TTTTAACACCGTACAAAAGCAAAC 57.371 33.333 0.00 0.00 0.00 2.93
566 813 7.088905 TCTTTTTAACACCGTACAAAAGCAAA 58.911 30.769 7.22 0.00 35.37 3.68
567 814 6.618811 TCTTTTTAACACCGTACAAAAGCAA 58.381 32.000 7.22 0.00 35.37 3.91
568 815 6.192234 TCTTTTTAACACCGTACAAAAGCA 57.808 33.333 7.22 0.00 35.37 3.91
569 816 7.509050 TTTCTTTTTAACACCGTACAAAAGC 57.491 32.000 7.22 0.00 35.37 3.51
573 820 9.733219 CCTATTTTTCTTTTTAACACCGTACAA 57.267 29.630 0.00 0.00 0.00 2.41
574 821 9.118300 TCCTATTTTTCTTTTTAACACCGTACA 57.882 29.630 0.00 0.00 0.00 2.90
575 822 9.603298 CTCCTATTTTTCTTTTTAACACCGTAC 57.397 33.333 0.00 0.00 0.00 3.67
576 823 8.291740 GCTCCTATTTTTCTTTTTAACACCGTA 58.708 33.333 0.00 0.00 0.00 4.02
577 824 7.143340 GCTCCTATTTTTCTTTTTAACACCGT 58.857 34.615 0.00 0.00 0.00 4.83
578 825 7.114388 GTGCTCCTATTTTTCTTTTTAACACCG 59.886 37.037 0.00 0.00 0.00 4.94
579 826 7.923878 TGTGCTCCTATTTTTCTTTTTAACACC 59.076 33.333 0.00 0.00 0.00 4.16
580 827 8.865590 TGTGCTCCTATTTTTCTTTTTAACAC 57.134 30.769 0.00 0.00 0.00 3.32
581 828 7.651704 GCTGTGCTCCTATTTTTCTTTTTAACA 59.348 33.333 0.00 0.00 0.00 2.41
582 829 7.651704 TGCTGTGCTCCTATTTTTCTTTTTAAC 59.348 33.333 0.00 0.00 0.00 2.01
583 830 7.721402 TGCTGTGCTCCTATTTTTCTTTTTAA 58.279 30.769 0.00 0.00 0.00 1.52
584 831 7.283625 TGCTGTGCTCCTATTTTTCTTTTTA 57.716 32.000 0.00 0.00 0.00 1.52
585 832 6.160576 TGCTGTGCTCCTATTTTTCTTTTT 57.839 33.333 0.00 0.00 0.00 1.94
586 833 5.789643 TGCTGTGCTCCTATTTTTCTTTT 57.210 34.783 0.00 0.00 0.00 2.27
587 834 5.509670 GGTTGCTGTGCTCCTATTTTTCTTT 60.510 40.000 0.00 0.00 0.00 2.52
588 835 4.021981 GGTTGCTGTGCTCCTATTTTTCTT 60.022 41.667 0.00 0.00 0.00 2.52
589 836 3.507622 GGTTGCTGTGCTCCTATTTTTCT 59.492 43.478 0.00 0.00 0.00 2.52
590 837 3.255642 TGGTTGCTGTGCTCCTATTTTTC 59.744 43.478 0.00 0.00 0.00 2.29
591 838 3.230134 TGGTTGCTGTGCTCCTATTTTT 58.770 40.909 0.00 0.00 0.00 1.94
592 839 2.875296 TGGTTGCTGTGCTCCTATTTT 58.125 42.857 0.00 0.00 0.00 1.82
593 840 2.584835 TGGTTGCTGTGCTCCTATTT 57.415 45.000 0.00 0.00 0.00 1.40
594 841 2.584835 TTGGTTGCTGTGCTCCTATT 57.415 45.000 0.00 0.00 0.00 1.73
595 842 2.440409 CTTTGGTTGCTGTGCTCCTAT 58.560 47.619 0.00 0.00 0.00 2.57
596 843 1.896220 CTTTGGTTGCTGTGCTCCTA 58.104 50.000 0.00 0.00 0.00 2.94
597 844 1.458639 GCTTTGGTTGCTGTGCTCCT 61.459 55.000 0.00 0.00 0.00 3.69
598 845 1.006922 GCTTTGGTTGCTGTGCTCC 60.007 57.895 0.00 0.00 0.00 4.70
599 846 0.102844 TTGCTTTGGTTGCTGTGCTC 59.897 50.000 0.00 0.00 0.00 4.26
600 847 0.536260 TTTGCTTTGGTTGCTGTGCT 59.464 45.000 0.00 0.00 0.00 4.40
601 848 0.932399 CTTTGCTTTGGTTGCTGTGC 59.068 50.000 0.00 0.00 0.00 4.57
602 849 1.136695 TCCTTTGCTTTGGTTGCTGTG 59.863 47.619 0.00 0.00 0.00 3.66
603 850 1.136891 GTCCTTTGCTTTGGTTGCTGT 59.863 47.619 0.00 0.00 0.00 4.40
604 851 1.856802 GTCCTTTGCTTTGGTTGCTG 58.143 50.000 0.00 0.00 0.00 4.41
605 852 0.385390 CGTCCTTTGCTTTGGTTGCT 59.615 50.000 0.00 0.00 0.00 3.91
606 853 1.215014 GCGTCCTTTGCTTTGGTTGC 61.215 55.000 0.00 0.00 0.00 4.17
607 854 0.102120 TGCGTCCTTTGCTTTGGTTG 59.898 50.000 0.00 0.00 0.00 3.77
608 855 0.385390 CTGCGTCCTTTGCTTTGGTT 59.615 50.000 0.00 0.00 0.00 3.67
609 856 0.465460 TCTGCGTCCTTTGCTTTGGT 60.465 50.000 0.00 0.00 0.00 3.67
610 857 0.883833 ATCTGCGTCCTTTGCTTTGG 59.116 50.000 0.00 0.00 0.00 3.28
611 858 2.227388 AGAATCTGCGTCCTTTGCTTTG 59.773 45.455 0.00 0.00 0.00 2.77
612 859 2.227388 CAGAATCTGCGTCCTTTGCTTT 59.773 45.455 0.00 0.00 0.00 3.51
613 860 1.808945 CAGAATCTGCGTCCTTTGCTT 59.191 47.619 0.00 0.00 0.00 3.91
614 861 1.446907 CAGAATCTGCGTCCTTTGCT 58.553 50.000 0.00 0.00 0.00 3.91
615 862 3.984292 CAGAATCTGCGTCCTTTGC 57.016 52.632 0.00 0.00 0.00 3.68
625 872 2.928757 GCACTGTAGTCTGCAGAATCTG 59.071 50.000 21.62 16.83 37.40 2.90
626 873 2.564504 TGCACTGTAGTCTGCAGAATCT 59.435 45.455 21.62 15.70 37.40 2.40
627 874 2.670414 GTGCACTGTAGTCTGCAGAATC 59.330 50.000 21.62 12.66 38.00 2.52
628 875 2.037641 TGTGCACTGTAGTCTGCAGAAT 59.962 45.455 21.69 21.69 38.00 2.40
629 876 1.412343 TGTGCACTGTAGTCTGCAGAA 59.588 47.619 23.00 0.00 38.00 3.02
630 877 1.039856 TGTGCACTGTAGTCTGCAGA 58.960 50.000 23.00 13.74 38.00 4.26
631 878 1.143305 GTGTGCACTGTAGTCTGCAG 58.857 55.000 19.41 15.63 38.00 4.41
632 879 0.463620 TGTGTGCACTGTAGTCTGCA 59.536 50.000 19.41 0.00 34.67 4.41
633 880 1.581934 TTGTGTGCACTGTAGTCTGC 58.418 50.000 19.41 0.00 0.00 4.26
634 881 3.392882 TGATTGTGTGCACTGTAGTCTG 58.607 45.455 19.41 0.00 0.00 3.51
635 882 3.751479 TGATTGTGTGCACTGTAGTCT 57.249 42.857 19.41 0.00 0.00 3.24
636 883 6.480524 TTATTGATTGTGTGCACTGTAGTC 57.519 37.500 19.41 10.60 0.00 2.59
637 884 6.094048 GGATTATTGATTGTGTGCACTGTAGT 59.906 38.462 19.41 0.77 0.00 2.73
638 885 6.489675 GGATTATTGATTGTGTGCACTGTAG 58.510 40.000 19.41 0.00 0.00 2.74
639 886 5.064579 CGGATTATTGATTGTGTGCACTGTA 59.935 40.000 19.41 3.01 0.00 2.74
640 887 4.142622 CGGATTATTGATTGTGTGCACTGT 60.143 41.667 19.41 0.74 0.00 3.55
641 888 4.345288 CGGATTATTGATTGTGTGCACTG 58.655 43.478 19.41 0.00 0.00 3.66
642 889 3.181497 GCGGATTATTGATTGTGTGCACT 60.181 43.478 19.41 0.00 0.00 4.40
748 1004 4.541648 GGCTAGGCGGGGGAGAGA 62.542 72.222 0.00 0.00 0.00 3.10
1354 1664 4.796038 AACTTGCCCAATTTCATGAGAG 57.204 40.909 0.00 0.00 0.00 3.20
1395 1713 1.185315 CCACATTTGCCTAACTGGGG 58.815 55.000 0.00 0.00 34.24 4.96
1647 2009 4.854399 TGGATAACACTTTGAAACTTGCG 58.146 39.130 0.00 0.00 0.00 4.85
1701 4160 3.281727 TCAGAGTCACTTTGGTTTGCT 57.718 42.857 0.00 0.00 0.00 3.91
1708 4167 4.613167 GCTGCTGAATTCAGAGTCACTTTG 60.613 45.833 34.43 14.34 46.59 2.77
1720 4179 0.455633 CAACGCCAGCTGCTGAATTC 60.456 55.000 30.10 14.48 38.05 2.17
1736 4195 6.612306 CCACCACTAGAAAAAGATTAGCAAC 58.388 40.000 0.00 0.00 0.00 4.17
1745 4205 2.162681 CAGGGCCACCACTAGAAAAAG 58.837 52.381 6.18 0.00 40.13 2.27
1750 4210 1.918293 CACCAGGGCCACCACTAGA 60.918 63.158 6.18 0.00 40.13 2.43
1751 4211 2.671070 CACCAGGGCCACCACTAG 59.329 66.667 6.18 0.00 40.13 2.57
1791 4251 1.066002 CGGAGGCTTTGCATGGTAATG 59.934 52.381 0.00 0.00 36.82 1.90
1792 4252 1.392589 CGGAGGCTTTGCATGGTAAT 58.607 50.000 0.00 0.00 0.00 1.89
1793 4253 0.679640 CCGGAGGCTTTGCATGGTAA 60.680 55.000 0.00 0.00 46.14 2.85
1807 4267 6.812879 AGATAACAAAACCTAAAACCGGAG 57.187 37.500 9.46 0.00 0.00 4.63
1818 4278 7.489574 TTGGAAAATGCAAGATAACAAAACC 57.510 32.000 0.00 0.00 0.00 3.27
1820 4280 8.610896 CACTTTGGAAAATGCAAGATAACAAAA 58.389 29.630 0.00 0.00 0.00 2.44
1821 4281 7.984050 TCACTTTGGAAAATGCAAGATAACAAA 59.016 29.630 0.00 0.00 0.00 2.83
1851 4311 4.580868 TGCATTTAAGTATCCAACCGTCA 58.419 39.130 0.00 0.00 0.00 4.35
1889 4349 7.561722 AGAGGACAAATAGCTATACTCACAGAA 59.438 37.037 6.68 0.00 0.00 3.02
1897 4359 6.420913 TGGGAAGAGGACAAATAGCTATAC 57.579 41.667 6.68 0.00 0.00 1.47
1901 4363 3.117738 CCATGGGAAGAGGACAAATAGCT 60.118 47.826 2.85 0.00 0.00 3.32
1910 4372 2.293519 TGGACATACCATGGGAAGAGGA 60.294 50.000 18.09 0.00 44.64 3.71
1927 4389 4.955811 AAGGGAAAATGGAAACTTGGAC 57.044 40.909 0.00 0.00 0.00 4.02
1928 4390 7.625498 AATAAAGGGAAAATGGAAACTTGGA 57.375 32.000 0.00 0.00 0.00 3.53
1939 4401 9.471084 CACAAAACGAACTAATAAAGGGAAAAT 57.529 29.630 0.00 0.00 0.00 1.82
1957 4419 2.032799 ACACACCTATGCACACAAAACG 59.967 45.455 0.00 0.00 0.00 3.60
1967 4429 2.419667 ACCGTTGTAACACACCTATGC 58.580 47.619 0.00 0.00 0.00 3.14
1971 4433 1.270465 GCCTACCGTTGTAACACACCT 60.270 52.381 0.00 0.00 0.00 4.00
1981 4443 1.737838 ACATGTGATGCCTACCGTTG 58.262 50.000 0.00 0.00 0.00 4.10
1990 4452 7.225538 ACAGAATAAGCTACTTACATGTGATGC 59.774 37.037 9.11 5.53 0.00 3.91
1997 4459 5.980116 CAGCGACAGAATAAGCTACTTACAT 59.020 40.000 0.00 0.00 37.94 2.29
2070 4533 1.000385 CAGCGGTCCAAAAATCTTGCA 60.000 47.619 0.00 0.00 0.00 4.08
2097 4560 7.246171 AGTCACCTTAGAGCTCAATTTCTAA 57.754 36.000 17.77 3.62 35.31 2.10
2098 4561 6.859112 AGTCACCTTAGAGCTCAATTTCTA 57.141 37.500 17.77 0.00 0.00 2.10
2164 4627 2.609459 CCAATTCAGTAGGCTACTTGCG 59.391 50.000 24.19 13.60 44.05 4.85
2229 4705 4.322567 CCATGCTAAGCTAATCTCCCTTC 58.677 47.826 0.00 0.00 0.00 3.46
2254 4730 7.519347 TTATTTACTCCCACCTCAACCTTAT 57.481 36.000 0.00 0.00 0.00 1.73
2299 4775 8.571336 CCCTGCTTATTTACTCCAGAATAAATG 58.429 37.037 4.75 0.00 33.90 2.32
2332 4808 9.388506 CTGTACTCCAGAATAAATCAGACAATT 57.611 33.333 0.00 0.00 44.49 2.32
2358 4834 1.135489 TGTCAGCTATCGTCACGGAAC 60.135 52.381 0.00 0.00 0.00 3.62
2386 4862 9.613428 TTTTGAGACAAGAAACTAATGAGAAGA 57.387 29.630 0.00 0.00 0.00 2.87
2584 5060 7.920682 CCTGCACATAAAAAGTTAGTGAAAACT 59.079 33.333 0.00 0.00 41.46 2.66
2700 5176 9.442047 AAGAAACTGAACTACCATTGAATAGAG 57.558 33.333 2.91 0.00 0.00 2.43
2764 5240 9.748708 GATGGCAAAATATACTTTTCAATGCTA 57.251 29.630 0.00 0.00 0.00 3.49
2785 5262 5.936956 CCCTACAATTAGAATCTGAGATGGC 59.063 44.000 0.00 0.00 0.00 4.40
2936 5413 7.387397 TGTCCATTTGGCAAGTTTCATATTTTC 59.613 33.333 0.00 0.00 34.44 2.29
3551 6031 1.533625 ACGCACATACCAACAGCATT 58.466 45.000 0.00 0.00 0.00 3.56
3612 6092 1.380302 ACCTCATGGTCACAAGGCC 59.620 57.895 0.00 0.00 44.78 5.19
3634 6114 2.230660 CTGTTTCCAGGACTCAAACCC 58.769 52.381 0.00 0.00 34.90 4.11
3709 6189 1.069935 GCATAGGTCCGGAGAAGGC 59.930 63.158 3.06 2.40 0.00 4.35
3725 6206 1.591703 CACGTAGCTCCCTCTTGCA 59.408 57.895 0.00 0.00 0.00 4.08
3781 6262 8.644619 GTTTCCACAGTTTGAGTTAAAACTTTC 58.355 33.333 0.00 0.00 45.84 2.62
3813 6294 4.466726 AGGGAGGTGAACTACTACAATGAC 59.533 45.833 0.00 0.00 0.00 3.06
3817 6298 4.485875 TGAAGGGAGGTGAACTACTACAA 58.514 43.478 0.00 0.00 0.00 2.41
3887 6368 3.392285 ACTATGAATACATGCAGCAGGGA 59.608 43.478 12.54 2.26 37.87 4.20
4020 6513 2.892374 AGAAAGCAACCAAGCAAACAC 58.108 42.857 0.00 0.00 36.85 3.32
4082 6575 4.032960 AGCACCTGTGGATAAACAATCA 57.967 40.909 0.00 0.00 36.20 2.57
4176 6669 7.277981 GGCGGTGTAGATGGTAAAATATCATAG 59.722 40.741 0.00 0.00 27.47 2.23
4261 6755 9.372189 CTTGAATAGGAATATCAATCCCCTTTT 57.628 33.333 0.00 0.00 37.71 2.27
4302 6796 4.463891 ACAATCCGAAATGGCTCAGAAATT 59.536 37.500 0.00 0.00 37.80 1.82
4323 6817 4.708421 AGAAGTATCCGCTAACCTGTTACA 59.292 41.667 0.00 0.00 0.00 2.41
4382 6876 5.057149 GTGTAAATACTTCTGGATCCGCAT 58.943 41.667 7.39 0.00 0.00 4.73
4402 6896 1.913762 CGGAACCCTGGAGAGGTGT 60.914 63.158 0.00 0.00 37.78 4.16
4418 6912 4.201783 GGAAATACGACCATCTCAAAACGG 60.202 45.833 0.00 0.00 0.00 4.44
4446 6940 0.809241 GGCAGCAGTCATCTTCCTCG 60.809 60.000 0.00 0.00 0.00 4.63
4580 7075 0.969917 AGGCGTGCATCTCAGTCTCT 60.970 55.000 0.00 0.00 0.00 3.10
4585 7080 0.671472 TGAACAGGCGTGCATCTCAG 60.671 55.000 6.26 0.00 0.00 3.35
4586 7081 0.671472 CTGAACAGGCGTGCATCTCA 60.671 55.000 6.26 3.91 27.15 3.27
4587 7082 0.390340 TCTGAACAGGCGTGCATCTC 60.390 55.000 6.26 0.00 27.15 2.75
4588 7083 0.035317 TTCTGAACAGGCGTGCATCT 59.965 50.000 6.26 0.00 27.15 2.90
4589 7084 0.445436 CTTCTGAACAGGCGTGCATC 59.555 55.000 6.26 6.10 27.15 3.91
4590 7085 0.250467 ACTTCTGAACAGGCGTGCAT 60.250 50.000 6.26 0.00 27.15 3.96
4597 7092 3.820467 TGTGGCATTTACTTCTGAACAGG 59.180 43.478 0.00 0.00 0.00 4.00
4615 7110 5.819379 AGATGAGTGTATACAGCAAATGTGG 59.181 40.000 5.62 0.00 43.80 4.17
4621 7116 4.470334 TGCAGATGAGTGTATACAGCAA 57.530 40.909 5.62 0.00 0.00 3.91
4631 7126 8.374327 TGAGATAATGTAATTGCAGATGAGTG 57.626 34.615 1.90 0.00 36.99 3.51
4632 7127 8.427276 TCTGAGATAATGTAATTGCAGATGAGT 58.573 33.333 1.90 0.00 36.99 3.41
4633 7128 8.710551 GTCTGAGATAATGTAATTGCAGATGAG 58.289 37.037 1.90 0.00 36.99 2.90
4634 7129 8.206189 TGTCTGAGATAATGTAATTGCAGATGA 58.794 33.333 1.90 0.00 36.99 2.92
4716 7212 7.707104 ACTTCTCTTGGTTTTTACACAAGATG 58.293 34.615 6.78 4.20 46.50 2.90
4786 7282 1.454847 TTTGGGGGATGCCGTATGC 60.455 57.895 0.00 0.00 41.77 3.14
4831 7334 0.453950 GCACAAAGCATCAGACTGCG 60.454 55.000 0.00 0.00 46.86 5.18
4857 7360 6.205658 GGGACGAAGTAGTACGGAGTATAAAT 59.794 42.308 0.00 0.00 45.41 1.40
4861 7364 3.118261 TGGGACGAAGTAGTACGGAGTAT 60.118 47.826 0.00 0.00 45.41 2.12
4874 7377 4.253685 ACATCTTACATTGTGGGACGAAG 58.746 43.478 0.00 0.00 0.00 3.79
4875 7378 4.280436 ACATCTTACATTGTGGGACGAA 57.720 40.909 0.00 0.00 0.00 3.85
4876 7379 3.973206 ACATCTTACATTGTGGGACGA 57.027 42.857 0.00 0.00 0.00 4.20
4877 7380 5.181245 AGAAAACATCTTACATTGTGGGACG 59.819 40.000 0.00 0.00 33.39 4.79
4878 7381 6.575162 AGAAAACATCTTACATTGTGGGAC 57.425 37.500 0.00 0.00 33.39 4.46
4891 7394 4.693566 TCCGTCGCATAAAAGAAAACATCT 59.306 37.500 0.00 0.00 41.32 2.90
4892 7395 4.965062 TCCGTCGCATAAAAGAAAACATC 58.035 39.130 0.00 0.00 0.00 3.06
4893 7396 4.142687 CCTCCGTCGCATAAAAGAAAACAT 60.143 41.667 0.00 0.00 0.00 2.71
4894 7397 3.187637 CCTCCGTCGCATAAAAGAAAACA 59.812 43.478 0.00 0.00 0.00 2.83
4895 7398 3.425758 CCCTCCGTCGCATAAAAGAAAAC 60.426 47.826 0.00 0.00 0.00 2.43
4896 7399 2.745281 CCCTCCGTCGCATAAAAGAAAA 59.255 45.455 0.00 0.00 0.00 2.29
4897 7400 2.027929 TCCCTCCGTCGCATAAAAGAAA 60.028 45.455 0.00 0.00 0.00 2.52
4898 7401 1.551430 TCCCTCCGTCGCATAAAAGAA 59.449 47.619 0.00 0.00 0.00 2.52
4899 7402 1.136305 CTCCCTCCGTCGCATAAAAGA 59.864 52.381 0.00 0.00 0.00 2.52
4900 7403 1.134788 ACTCCCTCCGTCGCATAAAAG 60.135 52.381 0.00 0.00 0.00 2.27
4901 7404 0.899720 ACTCCCTCCGTCGCATAAAA 59.100 50.000 0.00 0.00 0.00 1.52
4902 7405 1.679680 CTACTCCCTCCGTCGCATAAA 59.320 52.381 0.00 0.00 0.00 1.40
4903 7406 1.315690 CTACTCCCTCCGTCGCATAA 58.684 55.000 0.00 0.00 0.00 1.90
4904 7407 0.536687 CCTACTCCCTCCGTCGCATA 60.537 60.000 0.00 0.00 0.00 3.14
4905 7408 1.828660 CCTACTCCCTCCGTCGCAT 60.829 63.158 0.00 0.00 0.00 4.73
4906 7409 2.439701 CCTACTCCCTCCGTCGCA 60.440 66.667 0.00 0.00 0.00 5.10
4907 7410 0.749454 TAACCTACTCCCTCCGTCGC 60.749 60.000 0.00 0.00 0.00 5.19
4908 7411 1.020437 GTAACCTACTCCCTCCGTCG 58.980 60.000 0.00 0.00 0.00 5.12
4909 7412 2.134789 TGTAACCTACTCCCTCCGTC 57.865 55.000 0.00 0.00 0.00 4.79
4910 7413 2.174360 GTTGTAACCTACTCCCTCCGT 58.826 52.381 0.00 0.00 0.00 4.69
4911 7414 2.165845 CTGTTGTAACCTACTCCCTCCG 59.834 54.545 0.00 0.00 0.00 4.63
4912 7415 3.171528 ACTGTTGTAACCTACTCCCTCC 58.828 50.000 0.00 0.00 0.00 4.30
4913 7416 3.119566 CGACTGTTGTAACCTACTCCCTC 60.120 52.174 0.00 0.00 0.00 4.30
4914 7417 2.824341 CGACTGTTGTAACCTACTCCCT 59.176 50.000 0.00 0.00 0.00 4.20
4915 7418 2.094338 CCGACTGTTGTAACCTACTCCC 60.094 54.545 0.00 0.00 0.00 4.30
4916 7419 2.673326 GCCGACTGTTGTAACCTACTCC 60.673 54.545 0.00 0.00 0.00 3.85
4917 7420 2.029649 TGCCGACTGTTGTAACCTACTC 60.030 50.000 0.00 0.00 0.00 2.59
4918 7421 1.965643 TGCCGACTGTTGTAACCTACT 59.034 47.619 0.00 0.00 0.00 2.57
4919 7422 2.064014 GTGCCGACTGTTGTAACCTAC 58.936 52.381 0.00 0.00 0.00 3.18
5199 7751 8.749841 ATAGATTTGAGAACTACGTATCATGC 57.250 34.615 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.