Multiple sequence alignment - TraesCS1B01G291000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G291000 chr1B 100.000 2463 0 0 533 2995 508546678 508544216 0.000000e+00 4549.0
1 TraesCS1B01G291000 chr1B 100.000 172 0 0 1 172 508547210 508547039 4.820000e-83 318.0
2 TraesCS1B01G291000 chr1D 91.828 1187 64 10 915 2096 379460260 379459102 0.000000e+00 1624.0
3 TraesCS1B01G291000 chr1D 94.256 383 18 2 2383 2765 379456887 379456509 1.550000e-162 582.0
4 TraesCS1B01G291000 chr1D 97.436 234 4 2 2764 2995 379456351 379456118 6.020000e-107 398.0
5 TraesCS1B01G291000 chr1D 94.144 222 7 4 2175 2392 379457518 379457299 1.720000e-87 333.0
6 TraesCS1B01G291000 chr1D 92.063 63 5 0 2081 2143 379457558 379457496 4.110000e-14 89.8
7 TraesCS1B01G291000 chr1A 90.426 1149 73 16 1010 2143 480551644 480550518 0.000000e+00 1478.0
8 TraesCS1B01G291000 chr1A 94.526 475 25 1 2522 2995 480550158 480549684 0.000000e+00 732.0
9 TraesCS1B01G291000 chr1A 91.503 306 10 4 2175 2465 480550540 480550236 1.000000e-109 407.0
10 TraesCS1B01G291000 chr2B 94.231 52 2 1 2471 2522 97569915 97569865 8.900000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G291000 chr1B 508544216 508547210 2994 True 2433.500000 4549 100.000000 1 2995 2 chr1B.!!$R1 2994
1 TraesCS1B01G291000 chr1D 379456118 379460260 4142 True 605.360000 1624 93.945400 915 2995 5 chr1D.!!$R1 2080
2 TraesCS1B01G291000 chr1A 480549684 480551644 1960 True 872.333333 1478 92.151667 1010 2995 3 chr1A.!!$R1 1985

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
685 686 0.037975 GCTGCCCACCAACATTTGAG 60.038 55.0 0.0 0.0 0.00 3.02 F
1537 1538 0.043940 AGGAGGAGGATGACCAAGCT 59.956 55.0 0.0 0.0 38.94 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1711 1724 0.105964 CAGTTCCACTTCCACGACCA 59.894 55.0 0.00 0.00 0.00 4.02 R
2700 4767 1.232909 TCCCTTGGGTTTAACCACCA 58.767 50.0 16.58 2.66 41.02 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.815227 CGTTTTTCAAGAAAAAGCAAACAC 57.185 33.333 18.11 7.25 46.91 3.32
24 25 6.589454 CGTTTTTCAAGAAAAAGCAAACACT 58.411 32.000 18.11 0.00 46.91 3.55
25 26 7.068955 CGTTTTTCAAGAAAAAGCAAACACTT 58.931 30.769 18.11 0.00 46.91 3.16
26 27 7.585936 CGTTTTTCAAGAAAAAGCAAACACTTT 59.414 29.630 18.11 0.00 46.91 2.66
28 29 9.444534 TTTTTCAAGAAAAAGCAAACACTTTTC 57.555 25.926 14.74 0.17 46.49 2.29
29 30 7.721286 TTCAAGAAAAAGCAAACACTTTTCA 57.279 28.000 8.68 0.00 46.49 2.69
30 31 7.116061 TCAAGAAAAAGCAAACACTTTTCAC 57.884 32.000 8.68 2.09 46.49 3.18
31 32 6.147000 TCAAGAAAAAGCAAACACTTTTCACC 59.853 34.615 8.68 0.00 46.49 4.02
32 33 5.793817 AGAAAAAGCAAACACTTTTCACCT 58.206 33.333 8.68 0.00 46.49 4.00
33 34 6.230472 AGAAAAAGCAAACACTTTTCACCTT 58.770 32.000 8.68 0.00 46.49 3.50
34 35 5.861222 AAAAGCAAACACTTTTCACCTTG 57.139 34.783 0.00 0.00 44.53 3.61
35 36 3.525268 AGCAAACACTTTTCACCTTGG 57.475 42.857 0.00 0.00 0.00 3.61
36 37 1.933181 GCAAACACTTTTCACCTTGGC 59.067 47.619 0.00 0.00 0.00 4.52
37 38 2.676463 GCAAACACTTTTCACCTTGGCA 60.676 45.455 0.00 0.00 0.00 4.92
38 39 3.795877 CAAACACTTTTCACCTTGGCAT 58.204 40.909 0.00 0.00 0.00 4.40
39 40 4.190772 CAAACACTTTTCACCTTGGCATT 58.809 39.130 0.00 0.00 0.00 3.56
40 41 3.457610 ACACTTTTCACCTTGGCATTG 57.542 42.857 0.00 0.00 0.00 2.82
41 42 3.030291 ACACTTTTCACCTTGGCATTGA 58.970 40.909 0.00 0.00 0.00 2.57
42 43 3.642848 ACACTTTTCACCTTGGCATTGAT 59.357 39.130 0.00 0.00 0.00 2.57
43 44 4.832266 ACACTTTTCACCTTGGCATTGATA 59.168 37.500 0.00 0.00 0.00 2.15
44 45 5.047802 ACACTTTTCACCTTGGCATTGATAG 60.048 40.000 0.00 0.00 0.00 2.08
45 46 5.183713 CACTTTTCACCTTGGCATTGATAGA 59.816 40.000 0.00 0.00 0.00 1.98
46 47 5.774690 ACTTTTCACCTTGGCATTGATAGAA 59.225 36.000 0.00 0.00 0.00 2.10
47 48 6.267471 ACTTTTCACCTTGGCATTGATAGAAA 59.733 34.615 0.00 0.00 0.00 2.52
48 49 6.662865 TTTCACCTTGGCATTGATAGAAAA 57.337 33.333 0.00 0.00 0.00 2.29
49 50 6.662865 TTCACCTTGGCATTGATAGAAAAA 57.337 33.333 0.00 0.00 0.00 1.94
87 88 2.310538 CCATAAGGGCATCTTCAACCC 58.689 52.381 0.00 0.00 44.62 4.11
90 91 3.140814 GGGCATCTTCAACCCGGC 61.141 66.667 0.00 0.00 32.92 6.13
91 92 2.044946 GGCATCTTCAACCCGGCT 60.045 61.111 0.00 0.00 0.00 5.52
92 93 2.115291 GGCATCTTCAACCCGGCTC 61.115 63.158 0.00 0.00 0.00 4.70
93 94 1.377202 GCATCTTCAACCCGGCTCA 60.377 57.895 0.00 0.00 0.00 4.26
94 95 1.648467 GCATCTTCAACCCGGCTCAC 61.648 60.000 0.00 0.00 0.00 3.51
95 96 1.026718 CATCTTCAACCCGGCTCACC 61.027 60.000 0.00 0.00 0.00 4.02
96 97 1.488705 ATCTTCAACCCGGCTCACCA 61.489 55.000 0.00 0.00 34.57 4.17
97 98 1.228124 CTTCAACCCGGCTCACCAA 60.228 57.895 0.00 0.00 34.57 3.67
98 99 0.821711 CTTCAACCCGGCTCACCAAA 60.822 55.000 0.00 0.00 34.57 3.28
99 100 0.178975 TTCAACCCGGCTCACCAAAT 60.179 50.000 0.00 0.00 34.57 2.32
100 101 0.608035 TCAACCCGGCTCACCAAATC 60.608 55.000 0.00 0.00 34.57 2.17
101 102 0.609131 CAACCCGGCTCACCAAATCT 60.609 55.000 0.00 0.00 34.57 2.40
102 103 0.322546 AACCCGGCTCACCAAATCTC 60.323 55.000 0.00 0.00 34.57 2.75
103 104 1.201429 ACCCGGCTCACCAAATCTCT 61.201 55.000 0.00 0.00 34.57 3.10
104 105 0.745845 CCCGGCTCACCAAATCTCTG 60.746 60.000 0.00 0.00 34.57 3.35
105 106 1.372087 CCGGCTCACCAAATCTCTGC 61.372 60.000 0.00 0.00 34.57 4.26
106 107 0.392193 CGGCTCACCAAATCTCTGCT 60.392 55.000 0.00 0.00 34.57 4.24
107 108 1.134699 CGGCTCACCAAATCTCTGCTA 60.135 52.381 0.00 0.00 34.57 3.49
108 109 2.559440 GGCTCACCAAATCTCTGCTAG 58.441 52.381 0.00 0.00 35.26 3.42
109 110 2.169352 GGCTCACCAAATCTCTGCTAGA 59.831 50.000 0.00 0.00 35.48 2.43
110 111 3.181456 GGCTCACCAAATCTCTGCTAGAT 60.181 47.826 0.00 0.00 40.56 1.98
111 112 3.808726 GCTCACCAAATCTCTGCTAGATG 59.191 47.826 0.00 0.00 44.56 2.90
112 113 4.682859 GCTCACCAAATCTCTGCTAGATGT 60.683 45.833 0.00 0.00 44.56 3.06
113 114 5.426504 CTCACCAAATCTCTGCTAGATGTT 58.573 41.667 0.00 0.00 44.56 2.71
114 115 5.423015 TCACCAAATCTCTGCTAGATGTTC 58.577 41.667 0.00 0.00 44.56 3.18
115 116 5.046376 TCACCAAATCTCTGCTAGATGTTCA 60.046 40.000 0.00 0.00 44.56 3.18
116 117 5.645067 CACCAAATCTCTGCTAGATGTTCAA 59.355 40.000 0.00 0.00 44.56 2.69
117 118 6.318144 CACCAAATCTCTGCTAGATGTTCAAT 59.682 38.462 0.00 0.00 44.56 2.57
118 119 7.496920 CACCAAATCTCTGCTAGATGTTCAATA 59.503 37.037 0.00 0.00 44.56 1.90
119 120 8.216423 ACCAAATCTCTGCTAGATGTTCAATAT 58.784 33.333 0.00 0.00 44.56 1.28
120 121 8.504815 CCAAATCTCTGCTAGATGTTCAATATG 58.495 37.037 0.00 0.00 44.56 1.78
121 122 9.053840 CAAATCTCTGCTAGATGTTCAATATGT 57.946 33.333 0.00 0.00 44.56 2.29
122 123 9.624373 AAATCTCTGCTAGATGTTCAATATGTT 57.376 29.630 0.00 0.00 44.56 2.71
123 124 9.624373 AATCTCTGCTAGATGTTCAATATGTTT 57.376 29.630 0.00 0.00 44.56 2.83
124 125 8.429493 TCTCTGCTAGATGTTCAATATGTTTG 57.571 34.615 0.00 0.00 0.00 2.93
125 126 7.496920 TCTCTGCTAGATGTTCAATATGTTTGG 59.503 37.037 0.00 0.00 0.00 3.28
126 127 7.337938 TCTGCTAGATGTTCAATATGTTTGGA 58.662 34.615 0.00 0.00 0.00 3.53
127 128 7.280876 TCTGCTAGATGTTCAATATGTTTGGAC 59.719 37.037 0.00 0.00 0.00 4.02
128 129 6.318648 TGCTAGATGTTCAATATGTTTGGACC 59.681 38.462 0.00 0.00 0.00 4.46
129 130 6.543831 GCTAGATGTTCAATATGTTTGGACCT 59.456 38.462 0.00 0.00 0.00 3.85
130 131 7.254932 GCTAGATGTTCAATATGTTTGGACCTC 60.255 40.741 0.00 0.93 0.00 3.85
131 132 6.484288 AGATGTTCAATATGTTTGGACCTCA 58.516 36.000 0.00 0.00 28.69 3.86
132 133 5.957842 TGTTCAATATGTTTGGACCTCAC 57.042 39.130 0.00 0.00 0.00 3.51
133 134 4.454161 TGTTCAATATGTTTGGACCTCACG 59.546 41.667 0.00 0.00 0.00 4.35
134 135 3.605634 TCAATATGTTTGGACCTCACGG 58.394 45.455 0.00 0.00 0.00 4.94
136 137 3.713826 ATATGTTTGGACCTCACGGTT 57.286 42.857 0.00 0.00 45.73 4.44
137 138 1.604604 ATGTTTGGACCTCACGGTTG 58.395 50.000 0.00 0.00 45.73 3.77
138 139 0.542333 TGTTTGGACCTCACGGTTGA 59.458 50.000 0.00 0.00 45.73 3.18
139 140 1.226746 GTTTGGACCTCACGGTTGAG 58.773 55.000 0.00 0.00 45.73 3.02
151 152 3.500680 TCACGGTTGAGACATTTTTAGGC 59.499 43.478 0.00 0.00 0.00 3.93
152 153 3.252215 CACGGTTGAGACATTTTTAGGCA 59.748 43.478 0.00 0.00 0.00 4.75
153 154 3.886505 ACGGTTGAGACATTTTTAGGCAA 59.113 39.130 0.00 0.00 0.00 4.52
154 155 4.226761 CGGTTGAGACATTTTTAGGCAAC 58.773 43.478 0.00 0.00 34.88 4.17
155 156 4.556233 GGTTGAGACATTTTTAGGCAACC 58.444 43.478 0.00 0.00 44.50 3.77
156 157 5.195001 GTTGAGACATTTTTAGGCAACCA 57.805 39.130 0.00 0.00 37.17 3.67
157 158 5.596845 GTTGAGACATTTTTAGGCAACCAA 58.403 37.500 0.00 0.00 37.17 3.67
158 159 5.195001 TGAGACATTTTTAGGCAACCAAC 57.805 39.130 0.00 0.00 37.17 3.77
159 160 4.226761 GAGACATTTTTAGGCAACCAACG 58.773 43.478 0.00 0.00 37.17 4.10
160 161 3.634910 AGACATTTTTAGGCAACCAACGT 59.365 39.130 0.00 0.00 37.17 3.99
161 162 4.098807 AGACATTTTTAGGCAACCAACGTT 59.901 37.500 0.00 0.00 37.17 3.99
162 163 5.299782 AGACATTTTTAGGCAACCAACGTTA 59.700 36.000 0.00 0.00 37.17 3.18
163 164 6.015772 AGACATTTTTAGGCAACCAACGTTAT 60.016 34.615 0.00 0.00 37.17 1.89
164 165 6.153756 ACATTTTTAGGCAACCAACGTTATC 58.846 36.000 0.00 0.00 37.17 1.75
165 166 4.769859 TTTTAGGCAACCAACGTTATCC 57.230 40.909 0.00 0.00 37.17 2.59
166 167 2.406596 TAGGCAACCAACGTTATCCC 57.593 50.000 0.00 0.00 37.17 3.85
167 168 0.696501 AGGCAACCAACGTTATCCCT 59.303 50.000 0.00 0.00 37.17 4.20
168 169 1.074889 AGGCAACCAACGTTATCCCTT 59.925 47.619 0.00 0.00 37.17 3.95
169 170 2.306512 AGGCAACCAACGTTATCCCTTA 59.693 45.455 0.00 0.00 37.17 2.69
170 171 3.053917 AGGCAACCAACGTTATCCCTTAT 60.054 43.478 0.00 0.00 37.17 1.73
171 172 3.697542 GGCAACCAACGTTATCCCTTATT 59.302 43.478 0.00 0.00 0.00 1.40
552 553 4.395987 GGGGGTCTAGGGAAGTCC 57.604 66.667 0.00 0.00 33.05 3.85
553 554 1.394963 GGGGGTCTAGGGAAGTCCA 59.605 63.158 0.00 0.00 35.30 4.02
554 555 0.691413 GGGGGTCTAGGGAAGTCCAG 60.691 65.000 0.00 0.00 35.30 3.86
555 556 0.338814 GGGGTCTAGGGAAGTCCAGA 59.661 60.000 0.00 0.00 35.30 3.86
556 557 1.487300 GGGTCTAGGGAAGTCCAGAC 58.513 60.000 8.63 8.63 40.14 3.51
557 558 1.104630 GGTCTAGGGAAGTCCAGACG 58.895 60.000 10.24 0.00 40.95 4.18
558 559 1.616456 GGTCTAGGGAAGTCCAGACGT 60.616 57.143 10.24 0.00 40.95 4.34
559 560 2.356535 GGTCTAGGGAAGTCCAGACGTA 60.357 54.545 10.24 0.00 40.95 3.57
560 561 2.944349 GTCTAGGGAAGTCCAGACGTAG 59.056 54.545 0.00 0.00 35.54 3.51
561 562 2.842496 TCTAGGGAAGTCCAGACGTAGA 59.158 50.000 0.00 0.00 38.24 2.59
562 563 1.836802 AGGGAAGTCCAGACGTAGAC 58.163 55.000 0.00 5.03 38.24 2.59
563 564 1.075050 AGGGAAGTCCAGACGTAGACA 59.925 52.381 13.46 0.00 38.24 3.41
564 565 1.201880 GGGAAGTCCAGACGTAGACAC 59.798 57.143 13.46 7.97 37.91 3.67
565 566 1.201880 GGAAGTCCAGACGTAGACACC 59.798 57.143 13.46 11.93 35.38 4.16
566 567 1.884579 GAAGTCCAGACGTAGACACCA 59.115 52.381 13.46 0.00 35.38 4.17
567 568 1.245732 AGTCCAGACGTAGACACCAC 58.754 55.000 13.46 0.00 35.38 4.16
568 569 0.243095 GTCCAGACGTAGACACCACC 59.757 60.000 7.72 0.00 33.08 4.61
569 570 0.178984 TCCAGACGTAGACACCACCA 60.179 55.000 0.00 0.00 0.00 4.17
570 571 0.038526 CCAGACGTAGACACCACCAC 60.039 60.000 0.00 0.00 0.00 4.16
571 572 0.038526 CAGACGTAGACACCACCACC 60.039 60.000 0.00 0.00 0.00 4.61
572 573 1.080974 GACGTAGACACCACCACCG 60.081 63.158 0.00 0.00 0.00 4.94
573 574 2.431942 CGTAGACACCACCACCGC 60.432 66.667 0.00 0.00 0.00 5.68
574 575 2.738480 GTAGACACCACCACCGCA 59.262 61.111 0.00 0.00 0.00 5.69
575 576 1.070105 GTAGACACCACCACCGCAA 59.930 57.895 0.00 0.00 0.00 4.85
576 577 0.533308 GTAGACACCACCACCGCAAA 60.533 55.000 0.00 0.00 0.00 3.68
577 578 0.533308 TAGACACCACCACCGCAAAC 60.533 55.000 0.00 0.00 0.00 2.93
578 579 1.822186 GACACCACCACCGCAAACT 60.822 57.895 0.00 0.00 0.00 2.66
579 580 1.782028 GACACCACCACCGCAAACTC 61.782 60.000 0.00 0.00 0.00 3.01
580 581 1.821759 CACCACCACCGCAAACTCA 60.822 57.895 0.00 0.00 0.00 3.41
581 582 1.822186 ACCACCACCGCAAACTCAC 60.822 57.895 0.00 0.00 0.00 3.51
582 583 1.525995 CCACCACCGCAAACTCACT 60.526 57.895 0.00 0.00 0.00 3.41
583 584 1.101049 CCACCACCGCAAACTCACTT 61.101 55.000 0.00 0.00 0.00 3.16
584 585 0.738389 CACCACCGCAAACTCACTTT 59.262 50.000 0.00 0.00 0.00 2.66
585 586 1.021968 ACCACCGCAAACTCACTTTC 58.978 50.000 0.00 0.00 0.00 2.62
586 587 0.310854 CCACCGCAAACTCACTTTCC 59.689 55.000 0.00 0.00 0.00 3.13
587 588 0.310854 CACCGCAAACTCACTTTCCC 59.689 55.000 0.00 0.00 0.00 3.97
588 589 0.822121 ACCGCAAACTCACTTTCCCC 60.822 55.000 0.00 0.00 0.00 4.81
589 590 0.537371 CCGCAAACTCACTTTCCCCT 60.537 55.000 0.00 0.00 0.00 4.79
590 591 0.875059 CGCAAACTCACTTTCCCCTC 59.125 55.000 0.00 0.00 0.00 4.30
591 592 1.543429 CGCAAACTCACTTTCCCCTCT 60.543 52.381 0.00 0.00 0.00 3.69
592 593 2.289444 CGCAAACTCACTTTCCCCTCTA 60.289 50.000 0.00 0.00 0.00 2.43
593 594 3.619979 CGCAAACTCACTTTCCCCTCTAT 60.620 47.826 0.00 0.00 0.00 1.98
594 595 4.336280 GCAAACTCACTTTCCCCTCTATT 58.664 43.478 0.00 0.00 0.00 1.73
595 596 4.767409 GCAAACTCACTTTCCCCTCTATTT 59.233 41.667 0.00 0.00 0.00 1.40
596 597 5.106118 GCAAACTCACTTTCCCCTCTATTTC 60.106 44.000 0.00 0.00 0.00 2.17
597 598 4.846168 ACTCACTTTCCCCTCTATTTCC 57.154 45.455 0.00 0.00 0.00 3.13
598 599 3.523972 ACTCACTTTCCCCTCTATTTCCC 59.476 47.826 0.00 0.00 0.00 3.97
599 600 3.783082 CTCACTTTCCCCTCTATTTCCCT 59.217 47.826 0.00 0.00 0.00 4.20
600 601 4.183916 TCACTTTCCCCTCTATTTCCCTT 58.816 43.478 0.00 0.00 0.00 3.95
601 602 4.227527 TCACTTTCCCCTCTATTTCCCTTC 59.772 45.833 0.00 0.00 0.00 3.46
602 603 3.528078 ACTTTCCCCTCTATTTCCCTTCC 59.472 47.826 0.00 0.00 0.00 3.46
603 604 3.526360 TTCCCCTCTATTTCCCTTCCT 57.474 47.619 0.00 0.00 0.00 3.36
604 605 3.061909 TCCCCTCTATTTCCCTTCCTC 57.938 52.381 0.00 0.00 0.00 3.71
605 606 2.597304 TCCCCTCTATTTCCCTTCCTCT 59.403 50.000 0.00 0.00 0.00 3.69
606 607 3.015275 TCCCCTCTATTTCCCTTCCTCTT 59.985 47.826 0.00 0.00 0.00 2.85
607 608 3.788708 CCCCTCTATTTCCCTTCCTCTTT 59.211 47.826 0.00 0.00 0.00 2.52
608 609 4.141367 CCCCTCTATTTCCCTTCCTCTTTC 60.141 50.000 0.00 0.00 0.00 2.62
609 610 4.141367 CCCTCTATTTCCCTTCCTCTTTCC 60.141 50.000 0.00 0.00 0.00 3.13
610 611 4.475016 CCTCTATTTCCCTTCCTCTTTCCA 59.525 45.833 0.00 0.00 0.00 3.53
611 612 5.133491 CCTCTATTTCCCTTCCTCTTTCCAT 59.867 44.000 0.00 0.00 0.00 3.41
612 613 6.354301 CCTCTATTTCCCTTCCTCTTTCCATT 60.354 42.308 0.00 0.00 0.00 3.16
613 614 7.147302 CCTCTATTTCCCTTCCTCTTTCCATTA 60.147 40.741 0.00 0.00 0.00 1.90
614 615 8.170121 TCTATTTCCCTTCCTCTTTCCATTAA 57.830 34.615 0.00 0.00 0.00 1.40
615 616 8.620177 TCTATTTCCCTTCCTCTTTCCATTAAA 58.380 33.333 0.00 0.00 0.00 1.52
616 617 6.911250 TTTCCCTTCCTCTTTCCATTAAAC 57.089 37.500 0.00 0.00 0.00 2.01
617 618 5.592587 TCCCTTCCTCTTTCCATTAAACA 57.407 39.130 0.00 0.00 0.00 2.83
618 619 5.959512 TCCCTTCCTCTTTCCATTAAACAA 58.040 37.500 0.00 0.00 0.00 2.83
619 620 6.377912 TCCCTTCCTCTTTCCATTAAACAAA 58.622 36.000 0.00 0.00 0.00 2.83
620 621 7.016296 TCCCTTCCTCTTTCCATTAAACAAAT 58.984 34.615 0.00 0.00 0.00 2.32
621 622 7.039082 TCCCTTCCTCTTTCCATTAAACAAATG 60.039 37.037 0.00 0.00 43.99 2.32
622 623 7.039082 CCCTTCCTCTTTCCATTAAACAAATGA 60.039 37.037 0.00 0.00 46.81 2.57
623 624 8.031277 CCTTCCTCTTTCCATTAAACAAATGAG 58.969 37.037 0.00 0.00 46.81 2.90
624 625 6.924111 TCCTCTTTCCATTAAACAAATGAGC 58.076 36.000 0.00 0.00 46.81 4.26
625 626 6.721208 TCCTCTTTCCATTAAACAAATGAGCT 59.279 34.615 0.00 0.00 46.81 4.09
626 627 6.810182 CCTCTTTCCATTAAACAAATGAGCTG 59.190 38.462 0.00 0.00 46.81 4.24
627 628 7.309377 CCTCTTTCCATTAAACAAATGAGCTGA 60.309 37.037 0.00 0.00 46.81 4.26
628 629 8.125978 TCTTTCCATTAAACAAATGAGCTGAT 57.874 30.769 0.00 0.00 46.81 2.90
629 630 9.241919 TCTTTCCATTAAACAAATGAGCTGATA 57.758 29.630 0.00 0.00 46.81 2.15
630 631 9.859427 CTTTCCATTAAACAAATGAGCTGATAA 57.141 29.630 0.00 0.00 46.81 1.75
633 634 9.806203 TCCATTAAACAAATGAGCTGATAATTG 57.194 29.630 0.00 0.00 46.81 2.32
634 635 9.806203 CCATTAAACAAATGAGCTGATAATTGA 57.194 29.630 4.82 0.00 46.81 2.57
637 638 6.461110 AACAAATGAGCTGATAATTGAGGG 57.539 37.500 4.82 0.00 0.00 4.30
638 639 5.759059 ACAAATGAGCTGATAATTGAGGGA 58.241 37.500 4.82 0.00 0.00 4.20
639 640 6.371278 ACAAATGAGCTGATAATTGAGGGAT 58.629 36.000 4.82 0.00 0.00 3.85
640 641 6.264744 ACAAATGAGCTGATAATTGAGGGATG 59.735 38.462 4.82 0.00 0.00 3.51
641 642 5.837770 ATGAGCTGATAATTGAGGGATGA 57.162 39.130 0.00 0.00 0.00 2.92
642 643 4.965814 TGAGCTGATAATTGAGGGATGAC 58.034 43.478 0.00 0.00 0.00 3.06
643 644 4.409901 TGAGCTGATAATTGAGGGATGACA 59.590 41.667 0.00 0.00 0.00 3.58
644 645 5.072736 TGAGCTGATAATTGAGGGATGACAT 59.927 40.000 0.00 0.00 0.00 3.06
645 646 5.950023 AGCTGATAATTGAGGGATGACATT 58.050 37.500 0.00 0.00 0.00 2.71
646 647 5.768662 AGCTGATAATTGAGGGATGACATTG 59.231 40.000 0.00 0.00 0.00 2.82
647 648 5.048224 GCTGATAATTGAGGGATGACATTGG 60.048 44.000 0.00 0.00 0.00 3.16
648 649 6.264771 TGATAATTGAGGGATGACATTGGA 57.735 37.500 0.00 0.00 0.00 3.53
649 650 6.855667 TGATAATTGAGGGATGACATTGGAT 58.144 36.000 0.00 0.00 0.00 3.41
650 651 6.717997 TGATAATTGAGGGATGACATTGGATG 59.282 38.462 0.00 0.00 0.00 3.51
651 652 4.801521 ATTGAGGGATGACATTGGATGA 57.198 40.909 0.00 0.00 0.00 2.92
652 653 3.565764 TGAGGGATGACATTGGATGAC 57.434 47.619 0.00 0.00 0.00 3.06
653 654 2.173356 TGAGGGATGACATTGGATGACC 59.827 50.000 0.00 0.00 0.00 4.02
654 655 1.141657 AGGGATGACATTGGATGACCG 59.858 52.381 0.00 0.00 39.42 4.79
655 656 1.134098 GGGATGACATTGGATGACCGT 60.134 52.381 0.00 0.00 39.42 4.83
656 657 2.213499 GGATGACATTGGATGACCGTC 58.787 52.381 0.00 0.00 39.42 4.79
657 658 2.419990 GGATGACATTGGATGACCGTCA 60.420 50.000 3.10 3.10 38.02 4.35
658 659 3.470709 GATGACATTGGATGACCGTCAT 58.529 45.455 14.01 14.01 42.78 3.06
681 682 2.990967 CGGCTGCCCACCAACATT 60.991 61.111 14.12 0.00 0.00 2.71
682 683 2.573083 CGGCTGCCCACCAACATTT 61.573 57.895 14.12 0.00 0.00 2.32
683 684 1.004679 GGCTGCCCACCAACATTTG 60.005 57.895 7.66 0.00 0.00 2.32
684 685 1.470996 GGCTGCCCACCAACATTTGA 61.471 55.000 7.66 0.00 0.00 2.69
685 686 0.037975 GCTGCCCACCAACATTTGAG 60.038 55.000 0.00 0.00 0.00 3.02
686 687 0.604578 CTGCCCACCAACATTTGAGG 59.395 55.000 0.00 0.00 0.00 3.86
687 688 0.831288 TGCCCACCAACATTTGAGGG 60.831 55.000 10.42 10.42 44.01 4.30
688 689 0.831711 GCCCACCAACATTTGAGGGT 60.832 55.000 14.21 0.00 43.47 4.34
692 693 1.613437 CACCAACATTTGAGGGTGTCC 59.387 52.381 13.52 0.00 44.47 4.02
693 694 0.881118 CCAACATTTGAGGGTGTCCG 59.119 55.000 0.00 0.00 38.33 4.79
694 695 1.604604 CAACATTTGAGGGTGTCCGT 58.395 50.000 0.00 0.00 38.33 4.69
695 696 1.953686 CAACATTTGAGGGTGTCCGTT 59.046 47.619 0.00 0.00 38.33 4.44
696 697 2.358322 ACATTTGAGGGTGTCCGTTT 57.642 45.000 0.00 0.00 38.33 3.60
697 698 1.953686 ACATTTGAGGGTGTCCGTTTG 59.046 47.619 0.00 0.00 38.33 2.93
698 699 1.953686 CATTTGAGGGTGTCCGTTTGT 59.046 47.619 0.00 0.00 38.33 2.83
699 700 2.131776 TTTGAGGGTGTCCGTTTGTT 57.868 45.000 0.00 0.00 38.33 2.83
700 701 3.278668 TTTGAGGGTGTCCGTTTGTTA 57.721 42.857 0.00 0.00 38.33 2.41
701 702 2.536761 TGAGGGTGTCCGTTTGTTAG 57.463 50.000 0.00 0.00 38.33 2.34
702 703 1.764134 TGAGGGTGTCCGTTTGTTAGT 59.236 47.619 0.00 0.00 38.33 2.24
703 704 2.140717 GAGGGTGTCCGTTTGTTAGTG 58.859 52.381 0.00 0.00 38.33 2.74
704 705 1.764134 AGGGTGTCCGTTTGTTAGTGA 59.236 47.619 0.00 0.00 38.33 3.41
705 706 2.171027 AGGGTGTCCGTTTGTTAGTGAA 59.829 45.455 0.00 0.00 38.33 3.18
706 707 2.546789 GGGTGTCCGTTTGTTAGTGAAG 59.453 50.000 0.00 0.00 0.00 3.02
707 708 3.460103 GGTGTCCGTTTGTTAGTGAAGA 58.540 45.455 0.00 0.00 0.00 2.87
708 709 4.062991 GGTGTCCGTTTGTTAGTGAAGAT 58.937 43.478 0.00 0.00 0.00 2.40
709 710 4.084013 GGTGTCCGTTTGTTAGTGAAGATG 60.084 45.833 0.00 0.00 0.00 2.90
710 711 3.496884 TGTCCGTTTGTTAGTGAAGATGC 59.503 43.478 0.00 0.00 0.00 3.91
711 712 3.071479 TCCGTTTGTTAGTGAAGATGCC 58.929 45.455 0.00 0.00 0.00 4.40
712 713 2.161609 CCGTTTGTTAGTGAAGATGCCC 59.838 50.000 0.00 0.00 0.00 5.36
713 714 3.074412 CGTTTGTTAGTGAAGATGCCCT 58.926 45.455 0.00 0.00 0.00 5.19
714 715 4.250464 CGTTTGTTAGTGAAGATGCCCTA 58.750 43.478 0.00 0.00 0.00 3.53
715 716 4.693566 CGTTTGTTAGTGAAGATGCCCTAA 59.306 41.667 0.00 0.00 0.00 2.69
716 717 5.163854 CGTTTGTTAGTGAAGATGCCCTAAG 60.164 44.000 0.00 0.00 0.00 2.18
717 718 5.499004 TTGTTAGTGAAGATGCCCTAAGT 57.501 39.130 0.00 0.00 0.00 2.24
718 719 5.086104 TGTTAGTGAAGATGCCCTAAGTC 57.914 43.478 0.00 0.00 0.00 3.01
719 720 4.081087 TGTTAGTGAAGATGCCCTAAGTCC 60.081 45.833 0.00 0.00 0.00 3.85
720 721 2.839228 AGTGAAGATGCCCTAAGTCCT 58.161 47.619 0.00 0.00 0.00 3.85
721 722 3.185455 AGTGAAGATGCCCTAAGTCCTT 58.815 45.455 0.00 0.00 0.00 3.36
722 723 3.054802 AGTGAAGATGCCCTAAGTCCTTG 60.055 47.826 0.00 0.00 0.00 3.61
723 724 2.912956 TGAAGATGCCCTAAGTCCTTGT 59.087 45.455 0.00 0.00 0.00 3.16
724 725 4.081087 GTGAAGATGCCCTAAGTCCTTGTA 60.081 45.833 0.00 0.00 0.00 2.41
725 726 4.081087 TGAAGATGCCCTAAGTCCTTGTAC 60.081 45.833 0.00 0.00 0.00 2.90
726 727 2.431057 AGATGCCCTAAGTCCTTGTACG 59.569 50.000 0.00 0.00 0.00 3.67
727 728 1.636148 TGCCCTAAGTCCTTGTACGT 58.364 50.000 0.00 0.00 0.00 3.57
728 729 2.806434 TGCCCTAAGTCCTTGTACGTA 58.194 47.619 0.00 0.00 0.00 3.57
729 730 3.368248 TGCCCTAAGTCCTTGTACGTAT 58.632 45.455 0.00 0.00 0.00 3.06
730 731 4.535781 TGCCCTAAGTCCTTGTACGTATA 58.464 43.478 0.00 0.00 0.00 1.47
731 732 4.955450 TGCCCTAAGTCCTTGTACGTATAA 59.045 41.667 0.00 0.72 0.00 0.98
732 733 5.599656 TGCCCTAAGTCCTTGTACGTATAAT 59.400 40.000 5.15 0.00 0.00 1.28
733 734 5.924825 GCCCTAAGTCCTTGTACGTATAATG 59.075 44.000 5.15 3.29 0.00 1.90
734 735 5.924825 CCCTAAGTCCTTGTACGTATAATGC 59.075 44.000 5.15 0.00 0.00 3.56
735 736 6.461927 CCCTAAGTCCTTGTACGTATAATGCA 60.462 42.308 5.15 0.00 0.00 3.96
736 737 6.982141 CCTAAGTCCTTGTACGTATAATGCAA 59.018 38.462 5.15 0.64 0.00 4.08
737 738 6.903883 AAGTCCTTGTACGTATAATGCAAG 57.096 37.500 13.26 13.26 38.91 4.01
742 743 6.417191 CTTGTACGTATAATGCAAGGTGTT 57.583 37.500 12.66 0.00 36.47 3.32
743 744 6.804770 TTGTACGTATAATGCAAGGTGTTT 57.195 33.333 0.00 0.00 0.00 2.83
744 745 7.902387 TTGTACGTATAATGCAAGGTGTTTA 57.098 32.000 0.00 0.00 0.00 2.01
745 746 7.528481 TGTACGTATAATGCAAGGTGTTTAG 57.472 36.000 0.00 0.00 0.00 1.85
746 747 6.535865 TGTACGTATAATGCAAGGTGTTTAGG 59.464 38.462 0.00 0.00 0.00 2.69
747 748 4.879545 ACGTATAATGCAAGGTGTTTAGGG 59.120 41.667 0.00 0.00 0.00 3.53
748 749 4.274950 CGTATAATGCAAGGTGTTTAGGGG 59.725 45.833 0.00 0.00 0.00 4.79
749 750 2.990740 AATGCAAGGTGTTTAGGGGA 57.009 45.000 0.00 0.00 0.00 4.81
750 751 2.514458 ATGCAAGGTGTTTAGGGGAG 57.486 50.000 0.00 0.00 0.00 4.30
751 752 0.404040 TGCAAGGTGTTTAGGGGAGG 59.596 55.000 0.00 0.00 0.00 4.30
752 753 0.696501 GCAAGGTGTTTAGGGGAGGA 59.303 55.000 0.00 0.00 0.00 3.71
753 754 1.340114 GCAAGGTGTTTAGGGGAGGAG 60.340 57.143 0.00 0.00 0.00 3.69
754 755 0.992695 AAGGTGTTTAGGGGAGGAGC 59.007 55.000 0.00 0.00 0.00 4.70
755 756 0.119358 AGGTGTTTAGGGGAGGAGCT 59.881 55.000 0.00 0.00 0.00 4.09
756 757 0.992695 GGTGTTTAGGGGAGGAGCTT 59.007 55.000 0.00 0.00 0.00 3.74
757 758 1.354705 GGTGTTTAGGGGAGGAGCTTT 59.645 52.381 0.00 0.00 0.00 3.51
758 759 2.574824 GGTGTTTAGGGGAGGAGCTTTA 59.425 50.000 0.00 0.00 0.00 1.85
759 760 3.009805 GGTGTTTAGGGGAGGAGCTTTAA 59.990 47.826 0.00 0.00 0.00 1.52
760 761 4.507869 GGTGTTTAGGGGAGGAGCTTTAAA 60.508 45.833 0.00 0.00 0.00 1.52
761 762 4.700692 GTGTTTAGGGGAGGAGCTTTAAAG 59.299 45.833 11.02 11.02 0.00 1.85
762 763 4.600111 TGTTTAGGGGAGGAGCTTTAAAGA 59.400 41.667 19.48 0.00 0.00 2.52
763 764 5.073965 TGTTTAGGGGAGGAGCTTTAAAGAA 59.926 40.000 19.48 0.00 0.00 2.52
764 765 5.853572 TTAGGGGAGGAGCTTTAAAGAAA 57.146 39.130 19.48 0.00 0.00 2.52
765 766 4.741928 AGGGGAGGAGCTTTAAAGAAAA 57.258 40.909 19.48 0.00 0.00 2.29
766 767 5.276694 AGGGGAGGAGCTTTAAAGAAAAT 57.723 39.130 19.48 1.45 0.00 1.82
767 768 6.402981 AGGGGAGGAGCTTTAAAGAAAATA 57.597 37.500 19.48 0.00 0.00 1.40
768 769 6.800890 AGGGGAGGAGCTTTAAAGAAAATAA 58.199 36.000 19.48 0.00 0.00 1.40
769 770 7.246027 AGGGGAGGAGCTTTAAAGAAAATAAA 58.754 34.615 19.48 0.00 0.00 1.40
770 771 7.733047 AGGGGAGGAGCTTTAAAGAAAATAAAA 59.267 33.333 19.48 0.00 0.00 1.52
771 772 8.035394 GGGGAGGAGCTTTAAAGAAAATAAAAG 58.965 37.037 19.48 0.00 33.15 2.27
772 773 8.035394 GGGAGGAGCTTTAAAGAAAATAAAAGG 58.965 37.037 19.48 0.00 31.16 3.11
773 774 8.585881 GGAGGAGCTTTAAAGAAAATAAAAGGT 58.414 33.333 19.48 0.00 41.06 3.50
774 775 9.411801 GAGGAGCTTTAAAGAAAATAAAAGGTG 57.588 33.333 19.48 0.00 39.14 4.00
775 776 9.143155 AGGAGCTTTAAAGAAAATAAAAGGTGA 57.857 29.630 19.48 0.00 39.14 4.02
776 777 9.758651 GGAGCTTTAAAGAAAATAAAAGGTGAA 57.241 29.630 19.48 0.00 39.14 3.18
790 791 9.474313 AATAAAAGGTGAACATCTAATTAGGCA 57.526 29.630 12.54 0.00 0.00 4.75
791 792 7.961326 AAAAGGTGAACATCTAATTAGGCAT 57.039 32.000 12.54 0.00 0.00 4.40
792 793 7.961326 AAAGGTGAACATCTAATTAGGCATT 57.039 32.000 12.54 4.49 0.00 3.56
793 794 7.573968 AAGGTGAACATCTAATTAGGCATTC 57.426 36.000 12.54 12.66 0.00 2.67
794 795 6.662755 AGGTGAACATCTAATTAGGCATTCA 58.337 36.000 12.54 14.68 0.00 2.57
795 796 6.543831 AGGTGAACATCTAATTAGGCATTCAC 59.456 38.462 27.40 27.40 42.42 3.18
796 797 6.318648 GGTGAACATCTAATTAGGCATTCACA 59.681 38.462 31.13 17.01 44.06 3.58
797 798 7.013655 GGTGAACATCTAATTAGGCATTCACAT 59.986 37.037 31.13 12.66 44.06 3.21
798 799 9.056005 GTGAACATCTAATTAGGCATTCACATA 57.944 33.333 28.71 8.04 42.59 2.29
799 800 9.797642 TGAACATCTAATTAGGCATTCACATAT 57.202 29.630 12.54 0.00 0.00 1.78
808 809 9.964354 AATTAGGCATTCACATATAGATAAGCA 57.036 29.630 0.00 0.00 0.00 3.91
809 810 8.777865 TTAGGCATTCACATATAGATAAGCAC 57.222 34.615 0.00 0.00 0.00 4.40
810 811 5.871524 AGGCATTCACATATAGATAAGCACG 59.128 40.000 0.00 0.00 0.00 5.34
811 812 5.063944 GGCATTCACATATAGATAAGCACGG 59.936 44.000 0.00 0.00 0.00 4.94
812 813 5.639506 GCATTCACATATAGATAAGCACGGT 59.360 40.000 0.00 0.00 0.00 4.83
813 814 6.401474 GCATTCACATATAGATAAGCACGGTG 60.401 42.308 3.15 3.15 0.00 4.94
814 815 4.556233 TCACATATAGATAAGCACGGTGC 58.444 43.478 25.00 25.00 45.46 5.01
825 826 2.766970 GCACGGTGCTTAAGAAAACA 57.233 45.000 25.08 0.00 40.96 2.83
826 827 3.282831 GCACGGTGCTTAAGAAAACAT 57.717 42.857 25.08 0.00 40.96 2.71
827 828 3.638484 GCACGGTGCTTAAGAAAACATT 58.362 40.909 25.08 0.00 40.96 2.71
828 829 3.425193 GCACGGTGCTTAAGAAAACATTG 59.575 43.478 25.08 3.53 40.96 2.82
829 830 4.791411 GCACGGTGCTTAAGAAAACATTGA 60.791 41.667 25.08 0.00 40.96 2.57
830 831 5.460646 CACGGTGCTTAAGAAAACATTGAT 58.539 37.500 6.67 0.00 0.00 2.57
831 832 5.920273 CACGGTGCTTAAGAAAACATTGATT 59.080 36.000 6.67 0.00 0.00 2.57
832 833 6.420604 CACGGTGCTTAAGAAAACATTGATTT 59.579 34.615 6.67 0.00 0.00 2.17
833 834 7.593273 CACGGTGCTTAAGAAAACATTGATTTA 59.407 33.333 6.67 0.00 0.00 1.40
834 835 8.303876 ACGGTGCTTAAGAAAACATTGATTTAT 58.696 29.630 6.67 0.00 0.00 1.40
835 836 9.139174 CGGTGCTTAAGAAAACATTGATTTATT 57.861 29.630 6.67 4.93 0.00 1.40
857 858 5.773239 TTTACTAAGCATTTTCCTCGACG 57.227 39.130 0.00 0.00 0.00 5.12
858 859 3.587797 ACTAAGCATTTTCCTCGACGA 57.412 42.857 0.00 0.00 0.00 4.20
859 860 3.251571 ACTAAGCATTTTCCTCGACGAC 58.748 45.455 0.00 0.00 0.00 4.34
860 861 1.439679 AAGCATTTTCCTCGACGACC 58.560 50.000 0.00 0.00 0.00 4.79
861 862 0.608640 AGCATTTTCCTCGACGACCT 59.391 50.000 0.00 0.00 0.00 3.85
862 863 1.002087 AGCATTTTCCTCGACGACCTT 59.998 47.619 0.00 0.00 0.00 3.50
863 864 1.128692 GCATTTTCCTCGACGACCTTG 59.871 52.381 0.00 0.00 0.00 3.61
864 865 1.128692 CATTTTCCTCGACGACCTTGC 59.871 52.381 0.00 0.00 0.00 4.01
865 866 0.105224 TTTTCCTCGACGACCTTGCA 59.895 50.000 0.00 0.00 0.00 4.08
866 867 0.320374 TTTCCTCGACGACCTTGCAT 59.680 50.000 0.00 0.00 0.00 3.96
867 868 0.108804 TTCCTCGACGACCTTGCATC 60.109 55.000 0.00 0.00 0.00 3.91
868 869 1.874019 CCTCGACGACCTTGCATCG 60.874 63.158 6.65 6.65 45.17 3.84
877 878 4.437858 CGACCTTGCATCGTATGTAAAG 57.562 45.455 0.00 0.00 34.50 1.85
878 879 3.245284 CGACCTTGCATCGTATGTAAAGG 59.755 47.826 18.51 18.51 44.68 3.11
879 880 2.943033 ACCTTGCATCGTATGTAAAGGC 59.057 45.455 19.25 1.33 43.81 4.35
880 881 2.290641 CCTTGCATCGTATGTAAAGGCC 59.709 50.000 0.00 0.00 38.49 5.19
881 882 3.206150 CTTGCATCGTATGTAAAGGCCT 58.794 45.455 0.00 0.00 34.50 5.19
882 883 4.377021 CTTGCATCGTATGTAAAGGCCTA 58.623 43.478 5.16 0.00 34.50 3.93
883 884 4.409718 TGCATCGTATGTAAAGGCCTAA 57.590 40.909 5.16 0.00 0.00 2.69
884 885 4.771903 TGCATCGTATGTAAAGGCCTAAA 58.228 39.130 5.16 0.00 0.00 1.85
885 886 5.186942 TGCATCGTATGTAAAGGCCTAAAA 58.813 37.500 5.16 0.00 0.00 1.52
886 887 5.648526 TGCATCGTATGTAAAGGCCTAAAAA 59.351 36.000 5.16 0.00 0.00 1.94
887 888 5.969435 GCATCGTATGTAAAGGCCTAAAAAC 59.031 40.000 5.16 2.38 0.00 2.43
888 889 6.492254 CATCGTATGTAAAGGCCTAAAAACC 58.508 40.000 5.16 0.00 0.00 3.27
889 890 5.807909 TCGTATGTAAAGGCCTAAAAACCT 58.192 37.500 5.16 0.00 38.14 3.50
890 891 5.876460 TCGTATGTAAAGGCCTAAAAACCTC 59.124 40.000 5.16 0.00 34.31 3.85
891 892 5.065602 CGTATGTAAAGGCCTAAAAACCTCC 59.934 44.000 5.16 0.00 34.31 4.30
892 893 3.414269 TGTAAAGGCCTAAAAACCTCCG 58.586 45.455 5.16 0.00 34.31 4.63
893 894 2.963599 AAAGGCCTAAAAACCTCCGA 57.036 45.000 5.16 0.00 34.31 4.55
894 895 2.963599 AAGGCCTAAAAACCTCCGAA 57.036 45.000 5.16 0.00 34.31 4.30
895 896 2.963599 AGGCCTAAAAACCTCCGAAA 57.036 45.000 1.29 0.00 0.00 3.46
896 897 3.451402 AGGCCTAAAAACCTCCGAAAT 57.549 42.857 1.29 0.00 0.00 2.17
897 898 3.774734 AGGCCTAAAAACCTCCGAAATT 58.225 40.909 1.29 0.00 0.00 1.82
898 899 4.157246 AGGCCTAAAAACCTCCGAAATTT 58.843 39.130 1.29 0.00 0.00 1.82
899 900 4.219944 AGGCCTAAAAACCTCCGAAATTTC 59.780 41.667 1.29 8.20 0.00 2.17
900 901 4.021807 GGCCTAAAAACCTCCGAAATTTCA 60.022 41.667 17.99 0.00 0.00 2.69
901 902 5.510009 GGCCTAAAAACCTCCGAAATTTCAA 60.510 40.000 17.99 4.73 0.00 2.69
902 903 5.633601 GCCTAAAAACCTCCGAAATTTCAAG 59.366 40.000 17.99 13.33 0.00 3.02
903 904 6.156519 CCTAAAAACCTCCGAAATTTCAAGG 58.843 40.000 24.84 24.84 36.41 3.61
904 905 5.607939 AAAAACCTCCGAAATTTCAAGGT 57.392 34.783 25.81 25.81 41.89 3.50
905 906 5.607939 AAAACCTCCGAAATTTCAAGGTT 57.392 34.783 30.97 30.97 46.51 3.50
906 907 4.584327 AACCTCCGAAATTTCAAGGTTG 57.416 40.909 33.38 19.35 44.61 3.77
907 908 3.562182 ACCTCCGAAATTTCAAGGTTGT 58.438 40.909 25.81 15.08 38.92 3.32
908 909 4.721132 ACCTCCGAAATTTCAAGGTTGTA 58.279 39.130 25.81 4.53 38.92 2.41
909 910 4.517832 ACCTCCGAAATTTCAAGGTTGTAC 59.482 41.667 25.81 0.00 38.92 2.90
910 911 4.760204 CCTCCGAAATTTCAAGGTTGTACT 59.240 41.667 20.91 0.00 0.00 2.73
911 912 5.106673 CCTCCGAAATTTCAAGGTTGTACTC 60.107 44.000 20.91 0.00 0.00 2.59
912 913 4.758165 TCCGAAATTTCAAGGTTGTACTCC 59.242 41.667 17.99 0.00 0.00 3.85
913 914 4.517453 CCGAAATTTCAAGGTTGTACTCCA 59.483 41.667 17.99 0.00 0.00 3.86
924 925 3.939592 GGTTGTACTCCAAAGTGATAGGC 59.060 47.826 0.00 0.00 36.92 3.93
925 926 4.564821 GGTTGTACTCCAAAGTGATAGGCA 60.565 45.833 0.00 0.00 36.92 4.75
940 941 1.225426 GGCACCATCATGAGAGGCA 59.775 57.895 15.04 0.00 0.00 4.75
974 975 5.453339 CCAAGGGGGAGAAAAGAAAAGAAAC 60.453 44.000 0.00 0.00 40.01 2.78
977 978 3.323979 GGGGAGAAAAGAAAAGAAACCCC 59.676 47.826 0.00 0.00 45.89 4.95
994 995 0.331616 CCCAACCCCCTAGAACCTTG 59.668 60.000 0.00 0.00 0.00 3.61
999 1000 1.077429 CCCCTAGAACCTTGCTGCC 60.077 63.158 0.00 0.00 0.00 4.85
1003 1004 1.386533 CTAGAACCTTGCTGCCATGG 58.613 55.000 7.63 7.63 40.97 3.66
1004 1005 0.680921 TAGAACCTTGCTGCCATGGC 60.681 55.000 30.54 30.54 39.30 4.40
1005 1006 2.999063 AACCTTGCTGCCATGGCC 60.999 61.111 33.44 19.61 39.30 5.36
1006 1007 3.831727 AACCTTGCTGCCATGGCCA 62.832 57.895 33.44 22.10 39.30 5.36
1007 1008 2.762459 CCTTGCTGCCATGGCCAT 60.762 61.111 33.44 14.09 41.09 4.40
1008 1009 2.792947 CCTTGCTGCCATGGCCATC 61.793 63.158 33.44 21.40 41.09 3.51
1298 1299 1.683319 GCCATTTCTCTCCCCTTCACC 60.683 57.143 0.00 0.00 0.00 4.02
1319 1320 3.338249 CGCAGATGATTCGGGGAATAAT 58.662 45.455 0.00 0.00 31.89 1.28
1325 1326 5.548056 AGATGATTCGGGGAATAATACTGGT 59.452 40.000 0.00 0.00 31.89 4.00
1327 1328 5.617252 TGATTCGGGGAATAATACTGGTTC 58.383 41.667 0.00 0.00 31.89 3.62
1336 1337 7.283329 GGGAATAATACTGGTTCATCTGAAGT 58.717 38.462 0.00 0.00 34.27 3.01
1338 1339 9.178758 GGAATAATACTGGTTCATCTGAAGTTT 57.821 33.333 0.00 0.00 34.27 2.66
1358 1359 7.418337 AGTTTTAACAATGGATTATGGTCCC 57.582 36.000 0.00 0.00 37.48 4.46
1522 1523 4.838486 GACGACGGCGAGCAGGAG 62.838 72.222 22.49 0.00 41.64 3.69
1537 1538 0.043940 AGGAGGAGGATGACCAAGCT 59.956 55.000 0.00 0.00 38.94 3.74
1538 1539 0.179936 GGAGGAGGATGACCAAGCTG 59.820 60.000 0.00 0.00 38.94 4.24
1539 1540 1.198713 GAGGAGGATGACCAAGCTGA 58.801 55.000 0.00 0.00 38.94 4.26
1605 1606 5.636903 AATAAGTACTGCATCCCACTCAT 57.363 39.130 0.00 0.00 0.00 2.90
1658 1659 1.980784 ATGCTTGGAGATCGGCTGCT 61.981 55.000 0.00 0.00 35.71 4.24
1669 1670 3.402681 GGCTGCTGCTCCTACCCA 61.403 66.667 15.64 0.00 39.59 4.51
1710 1723 2.229784 GGTTGGAGTTTGAATCTGCTGG 59.770 50.000 0.00 0.00 0.00 4.85
1711 1724 2.887152 GTTGGAGTTTGAATCTGCTGGT 59.113 45.455 0.00 0.00 0.00 4.00
1712 1725 2.507484 TGGAGTTTGAATCTGCTGGTG 58.493 47.619 0.00 0.00 0.00 4.17
1713 1726 1.815003 GGAGTTTGAATCTGCTGGTGG 59.185 52.381 0.00 0.00 0.00 4.61
1714 1727 2.508526 GAGTTTGAATCTGCTGGTGGT 58.491 47.619 0.00 0.00 0.00 4.16
1715 1728 2.485814 GAGTTTGAATCTGCTGGTGGTC 59.514 50.000 0.00 0.00 0.00 4.02
1716 1729 1.197721 GTTTGAATCTGCTGGTGGTCG 59.802 52.381 0.00 0.00 0.00 4.79
1717 1730 0.396435 TTGAATCTGCTGGTGGTCGT 59.604 50.000 0.00 0.00 0.00 4.34
1718 1731 0.320683 TGAATCTGCTGGTGGTCGTG 60.321 55.000 0.00 0.00 0.00 4.35
1719 1732 1.003355 AATCTGCTGGTGGTCGTGG 60.003 57.895 0.00 0.00 0.00 4.94
1720 1733 1.480212 AATCTGCTGGTGGTCGTGGA 61.480 55.000 0.00 0.00 0.00 4.02
1721 1734 1.480212 ATCTGCTGGTGGTCGTGGAA 61.480 55.000 0.00 0.00 0.00 3.53
1832 1853 3.096092 ACACTGGGTTCACATTGTTTGT 58.904 40.909 0.00 0.00 39.91 2.83
1838 1859 5.136828 TGGGTTCACATTGTTTGTAGTGAT 58.863 37.500 0.00 0.00 40.32 3.06
1868 1889 1.610522 GAGCTTCAGAAGGCTTTGCAA 59.389 47.619 12.30 0.00 39.05 4.08
1907 1928 1.933853 GGCATCTCGACGCATTTTACT 59.066 47.619 0.00 0.00 0.00 2.24
1952 1973 2.200081 ACCAAGGAGTGCCATGAGTAT 58.800 47.619 0.00 0.00 34.85 2.12
1988 2009 6.887545 TGAGAAAACTCAAAGGTCTGGTAAAA 59.112 34.615 0.00 0.00 0.00 1.52
1997 2018 7.291566 TCAAAGGTCTGGTAAAAGGTTGAATA 58.708 34.615 0.00 0.00 0.00 1.75
1999 2020 5.816682 AGGTCTGGTAAAAGGTTGAATAGG 58.183 41.667 0.00 0.00 0.00 2.57
2003 2024 5.311121 TCTGGTAAAAGGTTGAATAGGGTGA 59.689 40.000 0.00 0.00 0.00 4.02
2011 2032 5.701224 AGGTTGAATAGGGTGAAAGTTCAA 58.299 37.500 0.00 0.00 39.21 2.69
2061 2087 6.002082 AGTTTGGACAAATGGTACTAGGAAC 58.998 40.000 0.34 0.00 32.36 3.62
2068 2094 4.481368 AATGGTACTAGGAACGCATTCA 57.519 40.909 0.00 0.00 36.46 2.57
2115 3700 1.147153 GTGAGATGGGGCCTAGCAC 59.853 63.158 8.18 0.87 0.00 4.40
2130 3715 4.134563 CCTAGCACTGTGTAACCTTTGTT 58.865 43.478 9.86 0.00 38.52 2.83
2131 3716 5.302360 CCTAGCACTGTGTAACCTTTGTTA 58.698 41.667 9.86 0.00 35.87 2.41
2136 3721 5.220970 GCACTGTGTAACCTTTGTTATGTGT 60.221 40.000 9.86 0.00 39.08 3.72
2137 3722 6.679392 GCACTGTGTAACCTTTGTTATGTGTT 60.679 38.462 9.86 0.00 39.08 3.32
2138 3723 7.467539 GCACTGTGTAACCTTTGTTATGTGTTA 60.468 37.037 9.86 0.00 39.08 2.41
2139 3724 8.564574 CACTGTGTAACCTTTGTTATGTGTTAT 58.435 33.333 0.00 0.00 39.08 1.89
2140 3725 8.564574 ACTGTGTAACCTTTGTTATGTGTTATG 58.435 33.333 0.00 0.00 39.08 1.90
2141 3726 8.453238 TGTGTAACCTTTGTTATGTGTTATGT 57.547 30.769 0.00 0.00 39.08 2.29
2142 3727 8.904834 TGTGTAACCTTTGTTATGTGTTATGTT 58.095 29.630 0.00 0.00 39.08 2.71
2143 3728 9.738832 GTGTAACCTTTGTTATGTGTTATGTTT 57.261 29.630 0.00 0.00 39.08 2.83
2217 3802 1.679680 CCATGGAGGCAAATGCTACTG 59.320 52.381 5.56 0.00 41.70 2.74
2219 3804 1.026182 TGGAGGCAAATGCTACTGCG 61.026 55.000 5.25 0.00 43.34 5.18
2470 4537 3.170717 AGTTTGTTACTCCCTCCGATCA 58.829 45.455 0.00 0.00 28.23 2.92
2490 4557 7.339207 CGATCAGTACGAAAGTTGTACAAAAA 58.661 34.615 10.51 0.00 46.40 1.94
2513 4580 5.297547 ACAGCGTCAATTAATATGGATCGT 58.702 37.500 0.00 0.00 0.00 3.73
2549 4616 1.168714 CTTCTGGCAACCTTAGGTGC 58.831 55.000 3.99 10.78 35.34 5.01
2592 4659 4.503643 CCAAACAGCCCAATGATTTGAACT 60.504 41.667 0.00 0.00 34.60 3.01
2626 4693 7.050377 TCTCAGTCCAAATTCCAGAATCATAC 58.950 38.462 0.00 0.00 0.00 2.39
2636 4703 6.769134 TTCCAGAATCATACGACTAACTGA 57.231 37.500 0.00 0.00 0.00 3.41
2672 4739 0.028505 CGAGCTTCGCCCATGAAATG 59.971 55.000 0.00 0.00 37.25 2.32
2887 5113 1.771854 TGGCAGAAAGTTCACCAGGTA 59.228 47.619 0.00 0.00 32.74 3.08
2953 5180 6.710744 ACACAGTGAAATTCCCTTAACTACAG 59.289 38.462 7.81 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.589454 AGTGTTTGCTTTTTCTTGAAAAACG 58.411 32.000 14.84 12.41 36.82 3.60
1 2 8.781067 AAAGTGTTTGCTTTTTCTTGAAAAAC 57.219 26.923 14.84 12.57 36.82 2.43
2 3 9.444534 GAAAAGTGTTTGCTTTTTCTTGAAAAA 57.555 25.926 17.01 17.01 45.40 1.94
3 4 8.616076 TGAAAAGTGTTTGCTTTTTCTTGAAAA 58.384 25.926 4.61 4.61 45.40 2.29
4 5 8.067189 GTGAAAAGTGTTTGCTTTTTCTTGAAA 58.933 29.630 5.45 0.00 45.40 2.69
5 6 7.307692 GGTGAAAAGTGTTTGCTTTTTCTTGAA 60.308 33.333 5.45 0.00 45.40 2.69
6 7 6.147000 GGTGAAAAGTGTTTGCTTTTTCTTGA 59.853 34.615 5.45 0.00 45.40 3.02
7 8 6.147656 AGGTGAAAAGTGTTTGCTTTTTCTTG 59.852 34.615 5.45 0.00 45.40 3.02
8 9 6.230472 AGGTGAAAAGTGTTTGCTTTTTCTT 58.770 32.000 5.45 0.00 45.40 2.52
9 10 5.793817 AGGTGAAAAGTGTTTGCTTTTTCT 58.206 33.333 5.45 2.66 45.40 2.52
10 11 6.306397 CAAGGTGAAAAGTGTTTGCTTTTTC 58.694 36.000 5.45 3.16 45.40 2.29
11 12 5.181056 CCAAGGTGAAAAGTGTTTGCTTTTT 59.819 36.000 5.45 0.00 45.40 1.94
13 14 4.252878 CCAAGGTGAAAAGTGTTTGCTTT 58.747 39.130 0.00 0.00 40.07 3.51
14 15 3.860641 CCAAGGTGAAAAGTGTTTGCTT 58.139 40.909 0.00 0.00 0.00 3.91
15 16 2.418609 GCCAAGGTGAAAAGTGTTTGCT 60.419 45.455 0.00 0.00 0.00 3.91
16 17 1.933181 GCCAAGGTGAAAAGTGTTTGC 59.067 47.619 0.00 0.00 0.00 3.68
17 18 3.244033 TGCCAAGGTGAAAAGTGTTTG 57.756 42.857 0.00 0.00 0.00 2.93
18 19 4.081198 TCAATGCCAAGGTGAAAAGTGTTT 60.081 37.500 0.00 0.00 0.00 2.83
19 20 3.450457 TCAATGCCAAGGTGAAAAGTGTT 59.550 39.130 0.00 0.00 0.00 3.32
20 21 3.030291 TCAATGCCAAGGTGAAAAGTGT 58.970 40.909 0.00 0.00 0.00 3.55
21 22 3.731652 TCAATGCCAAGGTGAAAAGTG 57.268 42.857 0.00 0.00 0.00 3.16
22 23 5.324409 TCTATCAATGCCAAGGTGAAAAGT 58.676 37.500 0.00 0.00 0.00 2.66
23 24 5.902613 TCTATCAATGCCAAGGTGAAAAG 57.097 39.130 0.00 0.00 0.00 2.27
24 25 6.662865 TTTCTATCAATGCCAAGGTGAAAA 57.337 33.333 0.00 0.00 0.00 2.29
25 26 6.662865 TTTTCTATCAATGCCAAGGTGAAA 57.337 33.333 0.00 0.00 0.00 2.69
26 27 6.662865 TTTTTCTATCAATGCCAAGGTGAA 57.337 33.333 0.00 0.00 0.00 3.18
67 68 2.310538 GGGTTGAAGATGCCCTTATGG 58.689 52.381 0.00 0.00 39.31 2.74
68 69 1.949525 CGGGTTGAAGATGCCCTTATG 59.050 52.381 0.00 0.00 40.22 1.90
69 70 1.133792 CCGGGTTGAAGATGCCCTTAT 60.134 52.381 0.00 0.00 40.22 1.73
70 71 0.254747 CCGGGTTGAAGATGCCCTTA 59.745 55.000 0.00 0.00 40.22 2.69
71 72 1.000896 CCGGGTTGAAGATGCCCTT 60.001 57.895 0.00 0.00 40.22 3.95
72 73 2.677228 CCGGGTTGAAGATGCCCT 59.323 61.111 0.00 0.00 40.22 5.19
73 74 3.140814 GCCGGGTTGAAGATGCCC 61.141 66.667 2.18 0.00 39.03 5.36
74 75 2.044946 AGCCGGGTTGAAGATGCC 60.045 61.111 0.00 0.00 0.00 4.40
75 76 1.377202 TGAGCCGGGTTGAAGATGC 60.377 57.895 8.00 0.00 0.00 3.91
76 77 1.026718 GGTGAGCCGGGTTGAAGATG 61.027 60.000 8.00 0.00 0.00 2.90
77 78 1.299976 GGTGAGCCGGGTTGAAGAT 59.700 57.895 8.00 0.00 0.00 2.40
78 79 1.701031 TTGGTGAGCCGGGTTGAAGA 61.701 55.000 8.00 0.00 37.67 2.87
79 80 0.821711 TTTGGTGAGCCGGGTTGAAG 60.822 55.000 8.00 0.00 37.67 3.02
80 81 0.178975 ATTTGGTGAGCCGGGTTGAA 60.179 50.000 8.00 0.00 37.67 2.69
81 82 0.608035 GATTTGGTGAGCCGGGTTGA 60.608 55.000 8.00 0.00 37.67 3.18
82 83 0.609131 AGATTTGGTGAGCCGGGTTG 60.609 55.000 8.00 0.00 37.67 3.77
83 84 0.322546 GAGATTTGGTGAGCCGGGTT 60.323 55.000 8.00 0.00 37.67 4.11
84 85 1.201429 AGAGATTTGGTGAGCCGGGT 61.201 55.000 5.45 5.45 37.67 5.28
85 86 0.745845 CAGAGATTTGGTGAGCCGGG 60.746 60.000 2.18 0.00 37.67 5.73
86 87 1.372087 GCAGAGATTTGGTGAGCCGG 61.372 60.000 0.00 0.00 37.67 6.13
87 88 0.392193 AGCAGAGATTTGGTGAGCCG 60.392 55.000 0.00 0.00 37.67 5.52
88 89 2.169352 TCTAGCAGAGATTTGGTGAGCC 59.831 50.000 0.00 0.00 0.00 4.70
89 90 3.533606 TCTAGCAGAGATTTGGTGAGC 57.466 47.619 0.00 0.00 0.00 4.26
90 91 5.021033 ACATCTAGCAGAGATTTGGTGAG 57.979 43.478 0.00 0.00 42.70 3.51
91 92 5.046376 TGAACATCTAGCAGAGATTTGGTGA 60.046 40.000 0.00 0.00 42.70 4.02
92 93 5.181009 TGAACATCTAGCAGAGATTTGGTG 58.819 41.667 0.00 0.00 42.70 4.17
93 94 5.426689 TGAACATCTAGCAGAGATTTGGT 57.573 39.130 0.00 0.00 42.70 3.67
94 95 6.939132 ATTGAACATCTAGCAGAGATTTGG 57.061 37.500 0.00 0.00 42.70 3.28
95 96 9.053840 ACATATTGAACATCTAGCAGAGATTTG 57.946 33.333 0.00 0.00 42.70 2.32
96 97 9.624373 AACATATTGAACATCTAGCAGAGATTT 57.376 29.630 0.00 0.00 42.70 2.17
97 98 9.624373 AAACATATTGAACATCTAGCAGAGATT 57.376 29.630 0.00 0.00 42.70 2.40
98 99 9.053840 CAAACATATTGAACATCTAGCAGAGAT 57.946 33.333 0.00 0.00 46.52 2.75
99 100 7.496920 CCAAACATATTGAACATCTAGCAGAGA 59.503 37.037 0.00 0.00 39.01 3.10
100 101 7.496920 TCCAAACATATTGAACATCTAGCAGAG 59.503 37.037 0.00 0.00 0.00 3.35
101 102 7.280876 GTCCAAACATATTGAACATCTAGCAGA 59.719 37.037 0.00 0.00 0.00 4.26
102 103 7.412853 GTCCAAACATATTGAACATCTAGCAG 58.587 38.462 0.00 0.00 0.00 4.24
103 104 6.318648 GGTCCAAACATATTGAACATCTAGCA 59.681 38.462 0.00 0.00 0.00 3.49
104 105 6.543831 AGGTCCAAACATATTGAACATCTAGC 59.456 38.462 0.00 0.00 0.00 3.42
105 106 7.770433 TGAGGTCCAAACATATTGAACATCTAG 59.230 37.037 0.00 0.00 0.00 2.43
106 107 7.552687 GTGAGGTCCAAACATATTGAACATCTA 59.447 37.037 0.00 0.00 0.00 1.98
107 108 6.375455 GTGAGGTCCAAACATATTGAACATCT 59.625 38.462 0.00 0.00 0.00 2.90
108 109 6.555315 GTGAGGTCCAAACATATTGAACATC 58.445 40.000 0.00 0.00 0.00 3.06
109 110 5.123820 CGTGAGGTCCAAACATATTGAACAT 59.876 40.000 0.00 0.00 0.00 2.71
110 111 4.454161 CGTGAGGTCCAAACATATTGAACA 59.546 41.667 0.00 0.00 0.00 3.18
111 112 4.969816 CGTGAGGTCCAAACATATTGAAC 58.030 43.478 0.00 0.00 0.00 3.18
129 130 3.500680 GCCTAAAAATGTCTCAACCGTGA 59.499 43.478 0.00 0.00 0.00 4.35
130 131 3.252215 TGCCTAAAAATGTCTCAACCGTG 59.748 43.478 0.00 0.00 0.00 4.94
131 132 3.482436 TGCCTAAAAATGTCTCAACCGT 58.518 40.909 0.00 0.00 0.00 4.83
132 133 4.226761 GTTGCCTAAAAATGTCTCAACCG 58.773 43.478 0.00 0.00 0.00 4.44
133 134 4.556233 GGTTGCCTAAAAATGTCTCAACC 58.444 43.478 5.62 5.62 43.13 3.77
134 135 5.195001 TGGTTGCCTAAAAATGTCTCAAC 57.805 39.130 0.00 0.00 33.61 3.18
135 136 5.596845 GTTGGTTGCCTAAAAATGTCTCAA 58.403 37.500 0.00 0.00 0.00 3.02
136 137 4.261405 CGTTGGTTGCCTAAAAATGTCTCA 60.261 41.667 0.00 0.00 0.00 3.27
137 138 4.226761 CGTTGGTTGCCTAAAAATGTCTC 58.773 43.478 0.00 0.00 0.00 3.36
138 139 3.634910 ACGTTGGTTGCCTAAAAATGTCT 59.365 39.130 0.00 0.00 0.00 3.41
139 140 3.972403 ACGTTGGTTGCCTAAAAATGTC 58.028 40.909 0.00 0.00 0.00 3.06
140 141 4.394439 AACGTTGGTTGCCTAAAAATGT 57.606 36.364 0.00 0.00 34.37 2.71
141 142 5.575218 GGATAACGTTGGTTGCCTAAAAATG 59.425 40.000 11.99 0.00 36.90 2.32
142 143 5.336929 GGGATAACGTTGGTTGCCTAAAAAT 60.337 40.000 11.99 0.00 36.90 1.82
143 144 4.022155 GGGATAACGTTGGTTGCCTAAAAA 60.022 41.667 11.99 0.00 36.90 1.94
144 145 3.506844 GGGATAACGTTGGTTGCCTAAAA 59.493 43.478 11.99 0.00 36.90 1.52
145 146 3.083293 GGGATAACGTTGGTTGCCTAAA 58.917 45.455 11.99 0.00 36.90 1.85
146 147 2.306512 AGGGATAACGTTGGTTGCCTAA 59.693 45.455 11.99 0.00 36.90 2.69
147 148 1.910671 AGGGATAACGTTGGTTGCCTA 59.089 47.619 11.99 0.00 36.90 3.93
148 149 0.696501 AGGGATAACGTTGGTTGCCT 59.303 50.000 11.99 12.47 36.90 4.75
149 150 1.541379 AAGGGATAACGTTGGTTGCC 58.459 50.000 11.99 10.34 36.90 4.52
150 151 4.976224 AATAAGGGATAACGTTGGTTGC 57.024 40.909 11.99 0.80 36.90 4.17
535 536 0.691413 CTGGACTTCCCTAGACCCCC 60.691 65.000 0.00 0.00 37.83 5.40
536 537 0.338814 TCTGGACTTCCCTAGACCCC 59.661 60.000 0.00 0.00 37.83 4.95
537 538 1.487300 GTCTGGACTTCCCTAGACCC 58.513 60.000 4.95 0.00 37.83 4.46
538 539 1.104630 CGTCTGGACTTCCCTAGACC 58.895 60.000 9.20 0.00 38.62 3.85
539 540 1.836802 ACGTCTGGACTTCCCTAGAC 58.163 55.000 5.91 5.91 38.54 2.59
540 541 2.842496 TCTACGTCTGGACTTCCCTAGA 59.158 50.000 0.00 0.00 35.38 2.43
541 542 2.944349 GTCTACGTCTGGACTTCCCTAG 59.056 54.545 0.00 0.00 35.38 3.02
542 543 2.306805 TGTCTACGTCTGGACTTCCCTA 59.693 50.000 14.29 0.00 35.38 3.53
543 544 1.075050 TGTCTACGTCTGGACTTCCCT 59.925 52.381 14.29 0.00 35.38 4.20
544 545 1.201880 GTGTCTACGTCTGGACTTCCC 59.798 57.143 14.29 0.00 34.01 3.97
545 546 1.201880 GGTGTCTACGTCTGGACTTCC 59.798 57.143 14.29 12.69 34.01 3.46
546 547 1.884579 TGGTGTCTACGTCTGGACTTC 59.115 52.381 14.29 9.13 34.01 3.01
547 548 1.612463 GTGGTGTCTACGTCTGGACTT 59.388 52.381 14.29 0.00 34.01 3.01
548 549 1.245732 GTGGTGTCTACGTCTGGACT 58.754 55.000 14.29 0.00 34.01 3.85
549 550 0.243095 GGTGGTGTCTACGTCTGGAC 59.757 60.000 0.00 0.00 0.00 4.02
550 551 0.178984 TGGTGGTGTCTACGTCTGGA 60.179 55.000 0.00 0.00 0.00 3.86
551 552 0.038526 GTGGTGGTGTCTACGTCTGG 60.039 60.000 0.00 0.00 0.00 3.86
552 553 0.038526 GGTGGTGGTGTCTACGTCTG 60.039 60.000 0.00 0.00 0.00 3.51
553 554 1.521450 CGGTGGTGGTGTCTACGTCT 61.521 60.000 0.00 0.00 0.00 4.18
554 555 1.080974 CGGTGGTGGTGTCTACGTC 60.081 63.158 0.00 0.00 0.00 4.34
555 556 3.045142 CGGTGGTGGTGTCTACGT 58.955 61.111 0.00 0.00 0.00 3.57
556 557 2.431942 GCGGTGGTGGTGTCTACG 60.432 66.667 0.00 0.00 0.00 3.51
557 558 0.533308 TTTGCGGTGGTGGTGTCTAC 60.533 55.000 0.00 0.00 0.00 2.59
558 559 0.533308 GTTTGCGGTGGTGGTGTCTA 60.533 55.000 0.00 0.00 0.00 2.59
559 560 1.822186 GTTTGCGGTGGTGGTGTCT 60.822 57.895 0.00 0.00 0.00 3.41
560 561 1.782028 GAGTTTGCGGTGGTGGTGTC 61.782 60.000 0.00 0.00 0.00 3.67
561 562 1.822186 GAGTTTGCGGTGGTGGTGT 60.822 57.895 0.00 0.00 0.00 4.16
562 563 1.821759 TGAGTTTGCGGTGGTGGTG 60.822 57.895 0.00 0.00 0.00 4.17
563 564 1.822186 GTGAGTTTGCGGTGGTGGT 60.822 57.895 0.00 0.00 0.00 4.16
564 565 1.101049 AAGTGAGTTTGCGGTGGTGG 61.101 55.000 0.00 0.00 0.00 4.61
565 566 0.738389 AAAGTGAGTTTGCGGTGGTG 59.262 50.000 0.00 0.00 0.00 4.17
566 567 1.021968 GAAAGTGAGTTTGCGGTGGT 58.978 50.000 0.00 0.00 0.00 4.16
567 568 0.310854 GGAAAGTGAGTTTGCGGTGG 59.689 55.000 0.00 0.00 0.00 4.61
568 569 0.310854 GGGAAAGTGAGTTTGCGGTG 59.689 55.000 0.00 0.00 37.35 4.94
569 570 0.822121 GGGGAAAGTGAGTTTGCGGT 60.822 55.000 0.00 0.00 37.35 5.68
570 571 0.537371 AGGGGAAAGTGAGTTTGCGG 60.537 55.000 0.00 0.00 37.35 5.69
571 572 0.875059 GAGGGGAAAGTGAGTTTGCG 59.125 55.000 0.00 0.00 37.35 4.85
572 573 2.278332 AGAGGGGAAAGTGAGTTTGC 57.722 50.000 0.00 0.00 35.78 3.68
573 574 5.416013 GGAAATAGAGGGGAAAGTGAGTTTG 59.584 44.000 0.00 0.00 0.00 2.93
574 575 5.516768 GGGAAATAGAGGGGAAAGTGAGTTT 60.517 44.000 0.00 0.00 0.00 2.66
575 576 4.018324 GGGAAATAGAGGGGAAAGTGAGTT 60.018 45.833 0.00 0.00 0.00 3.01
576 577 3.523972 GGGAAATAGAGGGGAAAGTGAGT 59.476 47.826 0.00 0.00 0.00 3.41
577 578 3.783082 AGGGAAATAGAGGGGAAAGTGAG 59.217 47.826 0.00 0.00 0.00 3.51
578 579 3.815507 AGGGAAATAGAGGGGAAAGTGA 58.184 45.455 0.00 0.00 0.00 3.41
579 580 4.527944 GAAGGGAAATAGAGGGGAAAGTG 58.472 47.826 0.00 0.00 0.00 3.16
580 581 3.528078 GGAAGGGAAATAGAGGGGAAAGT 59.472 47.826 0.00 0.00 0.00 2.66
581 582 3.788708 AGGAAGGGAAATAGAGGGGAAAG 59.211 47.826 0.00 0.00 0.00 2.62
582 583 3.786450 GAGGAAGGGAAATAGAGGGGAAA 59.214 47.826 0.00 0.00 0.00 3.13
583 584 3.015275 AGAGGAAGGGAAATAGAGGGGAA 59.985 47.826 0.00 0.00 0.00 3.97
584 585 2.597304 AGAGGAAGGGAAATAGAGGGGA 59.403 50.000 0.00 0.00 0.00 4.81
585 586 3.067645 AGAGGAAGGGAAATAGAGGGG 57.932 52.381 0.00 0.00 0.00 4.79
586 587 4.141367 GGAAAGAGGAAGGGAAATAGAGGG 60.141 50.000 0.00 0.00 0.00 4.30
587 588 4.475016 TGGAAAGAGGAAGGGAAATAGAGG 59.525 45.833 0.00 0.00 0.00 3.69
588 589 5.700402 TGGAAAGAGGAAGGGAAATAGAG 57.300 43.478 0.00 0.00 0.00 2.43
589 590 6.658555 AATGGAAAGAGGAAGGGAAATAGA 57.341 37.500 0.00 0.00 0.00 1.98
590 591 8.687242 GTTTAATGGAAAGAGGAAGGGAAATAG 58.313 37.037 0.00 0.00 0.00 1.73
591 592 8.174085 TGTTTAATGGAAAGAGGAAGGGAAATA 58.826 33.333 0.00 0.00 0.00 1.40
592 593 7.016296 TGTTTAATGGAAAGAGGAAGGGAAAT 58.984 34.615 0.00 0.00 0.00 2.17
593 594 6.377912 TGTTTAATGGAAAGAGGAAGGGAAA 58.622 36.000 0.00 0.00 0.00 3.13
594 595 5.959512 TGTTTAATGGAAAGAGGAAGGGAA 58.040 37.500 0.00 0.00 0.00 3.97
595 596 5.592587 TGTTTAATGGAAAGAGGAAGGGA 57.407 39.130 0.00 0.00 0.00 4.20
596 597 6.664428 TTTGTTTAATGGAAAGAGGAAGGG 57.336 37.500 0.00 0.00 0.00 3.95
597 598 7.895759 TCATTTGTTTAATGGAAAGAGGAAGG 58.104 34.615 0.00 0.00 43.19 3.46
598 599 7.543520 GCTCATTTGTTTAATGGAAAGAGGAAG 59.456 37.037 0.00 0.00 43.19 3.46
599 600 7.233348 AGCTCATTTGTTTAATGGAAAGAGGAA 59.767 33.333 0.00 0.00 43.19 3.36
600 601 6.721208 AGCTCATTTGTTTAATGGAAAGAGGA 59.279 34.615 0.00 0.00 43.19 3.71
601 602 6.810182 CAGCTCATTTGTTTAATGGAAAGAGG 59.190 38.462 0.00 0.00 43.19 3.69
602 603 7.596494 TCAGCTCATTTGTTTAATGGAAAGAG 58.404 34.615 0.00 0.00 43.19 2.85
603 604 7.523293 TCAGCTCATTTGTTTAATGGAAAGA 57.477 32.000 0.00 0.00 43.19 2.52
604 605 9.859427 TTATCAGCTCATTTGTTTAATGGAAAG 57.141 29.630 0.00 0.00 43.19 2.62
607 608 9.806203 CAATTATCAGCTCATTTGTTTAATGGA 57.194 29.630 0.00 0.00 43.19 3.41
608 609 9.806203 TCAATTATCAGCTCATTTGTTTAATGG 57.194 29.630 0.00 0.00 43.19 3.16
611 612 8.469200 CCCTCAATTATCAGCTCATTTGTTTAA 58.531 33.333 0.00 0.00 0.00 1.52
612 613 7.833682 TCCCTCAATTATCAGCTCATTTGTTTA 59.166 33.333 0.00 0.00 0.00 2.01
613 614 6.664816 TCCCTCAATTATCAGCTCATTTGTTT 59.335 34.615 0.00 0.00 0.00 2.83
614 615 6.189859 TCCCTCAATTATCAGCTCATTTGTT 58.810 36.000 0.00 0.00 0.00 2.83
615 616 5.759059 TCCCTCAATTATCAGCTCATTTGT 58.241 37.500 0.00 0.00 0.00 2.83
616 617 6.489022 TCATCCCTCAATTATCAGCTCATTTG 59.511 38.462 0.00 0.00 0.00 2.32
617 618 6.489361 GTCATCCCTCAATTATCAGCTCATTT 59.511 38.462 0.00 0.00 0.00 2.32
618 619 6.002704 GTCATCCCTCAATTATCAGCTCATT 58.997 40.000 0.00 0.00 0.00 2.57
619 620 5.072736 TGTCATCCCTCAATTATCAGCTCAT 59.927 40.000 0.00 0.00 0.00 2.90
620 621 4.409901 TGTCATCCCTCAATTATCAGCTCA 59.590 41.667 0.00 0.00 0.00 4.26
621 622 4.965814 TGTCATCCCTCAATTATCAGCTC 58.034 43.478 0.00 0.00 0.00 4.09
622 623 5.579753 ATGTCATCCCTCAATTATCAGCT 57.420 39.130 0.00 0.00 0.00 4.24
623 624 5.048224 CCAATGTCATCCCTCAATTATCAGC 60.048 44.000 0.00 0.00 0.00 4.26
624 625 6.301486 TCCAATGTCATCCCTCAATTATCAG 58.699 40.000 0.00 0.00 0.00 2.90
625 626 6.264771 TCCAATGTCATCCCTCAATTATCA 57.735 37.500 0.00 0.00 0.00 2.15
626 627 6.944290 TCATCCAATGTCATCCCTCAATTATC 59.056 38.462 0.00 0.00 0.00 1.75
627 628 6.718454 GTCATCCAATGTCATCCCTCAATTAT 59.282 38.462 0.00 0.00 0.00 1.28
628 629 6.064060 GTCATCCAATGTCATCCCTCAATTA 58.936 40.000 0.00 0.00 0.00 1.40
629 630 4.891756 GTCATCCAATGTCATCCCTCAATT 59.108 41.667 0.00 0.00 0.00 2.32
630 631 4.467769 GTCATCCAATGTCATCCCTCAAT 58.532 43.478 0.00 0.00 0.00 2.57
631 632 3.371917 GGTCATCCAATGTCATCCCTCAA 60.372 47.826 0.00 0.00 0.00 3.02
632 633 2.173356 GGTCATCCAATGTCATCCCTCA 59.827 50.000 0.00 0.00 0.00 3.86
633 634 2.808202 CGGTCATCCAATGTCATCCCTC 60.808 54.545 0.00 0.00 0.00 4.30
634 635 1.141657 CGGTCATCCAATGTCATCCCT 59.858 52.381 0.00 0.00 0.00 4.20
635 636 1.134098 ACGGTCATCCAATGTCATCCC 60.134 52.381 0.00 0.00 0.00 3.85
636 637 2.213499 GACGGTCATCCAATGTCATCC 58.787 52.381 2.62 0.00 0.00 3.51
637 638 2.905075 TGACGGTCATCCAATGTCATC 58.095 47.619 6.76 0.00 34.85 2.92
638 639 3.565764 ATGACGGTCATCCAATGTCAT 57.434 42.857 17.62 0.61 43.42 3.06
639 640 2.905075 GATGACGGTCATCCAATGTCA 58.095 47.619 31.57 0.88 45.66 3.58
664 665 2.573083 AAATGTTGGTGGGCAGCCG 61.573 57.895 5.00 0.00 0.00 5.52
665 666 1.004679 CAAATGTTGGTGGGCAGCC 60.005 57.895 1.26 1.26 0.00 4.85
666 667 0.037975 CTCAAATGTTGGTGGGCAGC 60.038 55.000 0.00 0.00 0.00 5.25
667 668 0.604578 CCTCAAATGTTGGTGGGCAG 59.395 55.000 0.00 0.00 0.00 4.85
668 669 0.831288 CCCTCAAATGTTGGTGGGCA 60.831 55.000 6.92 0.00 37.76 5.36
669 670 0.831711 ACCCTCAAATGTTGGTGGGC 60.832 55.000 15.22 0.00 43.62 5.36
670 671 0.968405 CACCCTCAAATGTTGGTGGG 59.032 55.000 14.28 14.28 43.60 4.61
673 674 1.817740 CGGACACCCTCAAATGTTGGT 60.818 52.381 0.00 0.00 0.00 3.67
674 675 0.881118 CGGACACCCTCAAATGTTGG 59.119 55.000 0.00 0.00 0.00 3.77
675 676 1.604604 ACGGACACCCTCAAATGTTG 58.395 50.000 0.00 0.00 0.00 3.33
676 677 2.358322 AACGGACACCCTCAAATGTT 57.642 45.000 0.00 0.00 0.00 2.71
677 678 1.953686 CAAACGGACACCCTCAAATGT 59.046 47.619 0.00 0.00 0.00 2.71
678 679 1.953686 ACAAACGGACACCCTCAAATG 59.046 47.619 0.00 0.00 0.00 2.32
679 680 2.358322 ACAAACGGACACCCTCAAAT 57.642 45.000 0.00 0.00 0.00 2.32
680 681 2.131776 AACAAACGGACACCCTCAAA 57.868 45.000 0.00 0.00 0.00 2.69
681 682 2.171027 ACTAACAAACGGACACCCTCAA 59.829 45.455 0.00 0.00 0.00 3.02
682 683 1.764134 ACTAACAAACGGACACCCTCA 59.236 47.619 0.00 0.00 0.00 3.86
683 684 2.140717 CACTAACAAACGGACACCCTC 58.859 52.381 0.00 0.00 0.00 4.30
684 685 1.764134 TCACTAACAAACGGACACCCT 59.236 47.619 0.00 0.00 0.00 4.34
685 686 2.243602 TCACTAACAAACGGACACCC 57.756 50.000 0.00 0.00 0.00 4.61
686 687 3.460103 TCTTCACTAACAAACGGACACC 58.540 45.455 0.00 0.00 0.00 4.16
687 688 4.610680 GCATCTTCACTAACAAACGGACAC 60.611 45.833 0.00 0.00 0.00 3.67
688 689 3.496884 GCATCTTCACTAACAAACGGACA 59.503 43.478 0.00 0.00 0.00 4.02
689 690 3.120304 GGCATCTTCACTAACAAACGGAC 60.120 47.826 0.00 0.00 0.00 4.79
690 691 3.071479 GGCATCTTCACTAACAAACGGA 58.929 45.455 0.00 0.00 0.00 4.69
691 692 2.161609 GGGCATCTTCACTAACAAACGG 59.838 50.000 0.00 0.00 0.00 4.44
692 693 3.074412 AGGGCATCTTCACTAACAAACG 58.926 45.455 0.00 0.00 0.00 3.60
693 694 5.705905 ACTTAGGGCATCTTCACTAACAAAC 59.294 40.000 0.00 0.00 0.00 2.93
694 695 5.876357 ACTTAGGGCATCTTCACTAACAAA 58.124 37.500 0.00 0.00 0.00 2.83
695 696 5.488341 GACTTAGGGCATCTTCACTAACAA 58.512 41.667 0.00 0.00 0.00 2.83
696 697 4.081087 GGACTTAGGGCATCTTCACTAACA 60.081 45.833 0.00 0.00 0.00 2.41
697 698 4.162509 AGGACTTAGGGCATCTTCACTAAC 59.837 45.833 0.00 0.00 0.00 2.34
698 699 4.362677 AGGACTTAGGGCATCTTCACTAA 58.637 43.478 0.00 0.00 0.00 2.24
699 700 3.995636 AGGACTTAGGGCATCTTCACTA 58.004 45.455 0.00 0.00 0.00 2.74
700 701 2.839228 AGGACTTAGGGCATCTTCACT 58.161 47.619 0.00 0.00 0.00 3.41
701 702 3.274288 CAAGGACTTAGGGCATCTTCAC 58.726 50.000 0.00 0.00 0.00 3.18
702 703 2.912956 ACAAGGACTTAGGGCATCTTCA 59.087 45.455 0.00 0.00 0.00 3.02
703 704 3.636153 ACAAGGACTTAGGGCATCTTC 57.364 47.619 0.00 0.00 0.00 2.87
704 705 3.118738 CGTACAAGGACTTAGGGCATCTT 60.119 47.826 0.00 0.00 0.00 2.40
705 706 2.431057 CGTACAAGGACTTAGGGCATCT 59.569 50.000 0.00 0.00 0.00 2.90
706 707 2.167900 ACGTACAAGGACTTAGGGCATC 59.832 50.000 0.00 0.00 0.00 3.91
707 708 2.185387 ACGTACAAGGACTTAGGGCAT 58.815 47.619 0.00 0.00 0.00 4.40
708 709 1.636148 ACGTACAAGGACTTAGGGCA 58.364 50.000 0.00 0.00 0.00 5.36
709 710 5.520376 TTATACGTACAAGGACTTAGGGC 57.480 43.478 0.00 0.00 0.00 5.19
710 711 5.924825 GCATTATACGTACAAGGACTTAGGG 59.075 44.000 1.87 0.00 0.00 3.53
711 712 6.509656 TGCATTATACGTACAAGGACTTAGG 58.490 40.000 1.87 0.00 0.00 2.69
712 713 7.997107 TTGCATTATACGTACAAGGACTTAG 57.003 36.000 1.87 0.00 0.00 2.18
713 714 7.997107 CTTGCATTATACGTACAAGGACTTA 57.003 36.000 1.87 0.00 35.26 2.24
714 715 6.903883 CTTGCATTATACGTACAAGGACTT 57.096 37.500 1.87 0.00 35.26 3.01
719 720 6.417191 AACACCTTGCATTATACGTACAAG 57.583 37.500 13.26 13.26 37.94 3.16
720 721 6.804770 AAACACCTTGCATTATACGTACAA 57.195 33.333 0.00 0.00 0.00 2.41
721 722 6.535865 CCTAAACACCTTGCATTATACGTACA 59.464 38.462 0.00 0.00 0.00 2.90
722 723 6.018507 CCCTAAACACCTTGCATTATACGTAC 60.019 42.308 0.00 0.00 0.00 3.67
723 724 6.050432 CCCTAAACACCTTGCATTATACGTA 58.950 40.000 0.00 0.00 0.00 3.57
724 725 4.879545 CCCTAAACACCTTGCATTATACGT 59.120 41.667 0.00 0.00 0.00 3.57
725 726 4.274950 CCCCTAAACACCTTGCATTATACG 59.725 45.833 0.00 0.00 0.00 3.06
726 727 5.442391 TCCCCTAAACACCTTGCATTATAC 58.558 41.667 0.00 0.00 0.00 1.47
727 728 5.398581 CCTCCCCTAAACACCTTGCATTATA 60.399 44.000 0.00 0.00 0.00 0.98
728 729 4.536765 CTCCCCTAAACACCTTGCATTAT 58.463 43.478 0.00 0.00 0.00 1.28
729 730 3.308832 CCTCCCCTAAACACCTTGCATTA 60.309 47.826 0.00 0.00 0.00 1.90
730 731 2.557452 CCTCCCCTAAACACCTTGCATT 60.557 50.000 0.00 0.00 0.00 3.56
731 732 1.005924 CCTCCCCTAAACACCTTGCAT 59.994 52.381 0.00 0.00 0.00 3.96
732 733 0.404040 CCTCCCCTAAACACCTTGCA 59.596 55.000 0.00 0.00 0.00 4.08
733 734 0.696501 TCCTCCCCTAAACACCTTGC 59.303 55.000 0.00 0.00 0.00 4.01
734 735 1.340114 GCTCCTCCCCTAAACACCTTG 60.340 57.143 0.00 0.00 0.00 3.61
735 736 0.992695 GCTCCTCCCCTAAACACCTT 59.007 55.000 0.00 0.00 0.00 3.50
736 737 0.119358 AGCTCCTCCCCTAAACACCT 59.881 55.000 0.00 0.00 0.00 4.00
737 738 0.992695 AAGCTCCTCCCCTAAACACC 59.007 55.000 0.00 0.00 0.00 4.16
738 739 2.881111 AAAGCTCCTCCCCTAAACAC 57.119 50.000 0.00 0.00 0.00 3.32
739 740 4.600111 TCTTTAAAGCTCCTCCCCTAAACA 59.400 41.667 10.51 0.00 0.00 2.83
740 741 5.175388 TCTTTAAAGCTCCTCCCCTAAAC 57.825 43.478 10.51 0.00 0.00 2.01
741 742 5.853572 TTCTTTAAAGCTCCTCCCCTAAA 57.146 39.130 10.51 0.00 0.00 1.85
742 743 5.853572 TTTCTTTAAAGCTCCTCCCCTAA 57.146 39.130 10.51 0.00 0.00 2.69
743 744 5.853572 TTTTCTTTAAAGCTCCTCCCCTA 57.146 39.130 10.51 0.00 0.00 3.53
744 745 4.741928 TTTTCTTTAAAGCTCCTCCCCT 57.258 40.909 10.51 0.00 0.00 4.79
745 746 7.476540 TTTATTTTCTTTAAAGCTCCTCCCC 57.523 36.000 10.51 0.00 0.00 4.81
746 747 8.035394 CCTTTTATTTTCTTTAAAGCTCCTCCC 58.965 37.037 10.51 0.00 0.00 4.30
747 748 8.585881 ACCTTTTATTTTCTTTAAAGCTCCTCC 58.414 33.333 10.51 0.00 0.00 4.30
748 749 9.411801 CACCTTTTATTTTCTTTAAAGCTCCTC 57.588 33.333 10.51 0.00 0.00 3.71
749 750 9.143155 TCACCTTTTATTTTCTTTAAAGCTCCT 57.857 29.630 10.51 0.00 0.00 3.69
750 751 9.758651 TTCACCTTTTATTTTCTTTAAAGCTCC 57.241 29.630 10.51 0.00 0.00 4.70
764 765 9.474313 TGCCTAATTAGATGTTCACCTTTTATT 57.526 29.630 14.28 0.00 0.00 1.40
765 766 9.646522 ATGCCTAATTAGATGTTCACCTTTTAT 57.353 29.630 14.28 0.00 0.00 1.40
766 767 9.474313 AATGCCTAATTAGATGTTCACCTTTTA 57.526 29.630 14.28 0.00 0.00 1.52
767 768 7.961326 ATGCCTAATTAGATGTTCACCTTTT 57.039 32.000 14.28 0.00 0.00 2.27
768 769 7.615365 TGAATGCCTAATTAGATGTTCACCTTT 59.385 33.333 14.28 0.00 0.00 3.11
769 770 7.067494 GTGAATGCCTAATTAGATGTTCACCTT 59.933 37.037 26.13 9.31 38.65 3.50
770 771 6.543831 GTGAATGCCTAATTAGATGTTCACCT 59.456 38.462 26.13 8.63 38.65 4.00
771 772 6.318648 TGTGAATGCCTAATTAGATGTTCACC 59.681 38.462 29.21 20.76 41.92 4.02
772 773 7.320443 TGTGAATGCCTAATTAGATGTTCAC 57.680 36.000 27.71 27.71 42.55 3.18
773 774 9.797642 ATATGTGAATGCCTAATTAGATGTTCA 57.202 29.630 14.28 15.34 0.00 3.18
782 783 9.964354 TGCTTATCTATATGTGAATGCCTAATT 57.036 29.630 0.00 0.00 0.00 1.40
783 784 9.388506 GTGCTTATCTATATGTGAATGCCTAAT 57.611 33.333 0.00 0.00 0.00 1.73
784 785 7.545615 CGTGCTTATCTATATGTGAATGCCTAA 59.454 37.037 0.00 0.00 0.00 2.69
785 786 7.035612 CGTGCTTATCTATATGTGAATGCCTA 58.964 38.462 0.00 0.00 0.00 3.93
786 787 5.871524 CGTGCTTATCTATATGTGAATGCCT 59.128 40.000 0.00 0.00 0.00 4.75
787 788 5.063944 CCGTGCTTATCTATATGTGAATGCC 59.936 44.000 0.00 0.00 0.00 4.40
788 789 5.639506 ACCGTGCTTATCTATATGTGAATGC 59.360 40.000 0.00 0.00 0.00 3.56
789 790 6.401474 GCACCGTGCTTATCTATATGTGAATG 60.401 42.308 16.51 0.00 40.96 2.67
790 791 5.639506 GCACCGTGCTTATCTATATGTGAAT 59.360 40.000 16.51 0.00 40.96 2.57
791 792 4.988540 GCACCGTGCTTATCTATATGTGAA 59.011 41.667 16.51 0.00 40.96 3.18
792 793 4.556233 GCACCGTGCTTATCTATATGTGA 58.444 43.478 16.51 0.00 40.96 3.58
793 794 4.910746 GCACCGTGCTTATCTATATGTG 57.089 45.455 16.51 0.00 40.96 3.21
806 807 2.766970 TGTTTTCTTAAGCACCGTGC 57.233 45.000 16.04 16.04 45.46 5.34
807 808 4.854399 TCAATGTTTTCTTAAGCACCGTG 58.146 39.130 0.00 0.00 0.00 4.94
808 809 5.705609 ATCAATGTTTTCTTAAGCACCGT 57.294 34.783 0.00 0.00 0.00 4.83
809 810 8.687824 ATAAATCAATGTTTTCTTAAGCACCG 57.312 30.769 0.00 0.00 0.00 4.94
831 832 8.385111 CGTCGAGGAAAATGCTTAGTAAAATAA 58.615 33.333 0.00 0.00 0.00 1.40
832 833 7.760794 TCGTCGAGGAAAATGCTTAGTAAAATA 59.239 33.333 5.12 0.00 0.00 1.40
833 834 6.592607 TCGTCGAGGAAAATGCTTAGTAAAAT 59.407 34.615 5.12 0.00 0.00 1.82
834 835 5.927689 TCGTCGAGGAAAATGCTTAGTAAAA 59.072 36.000 5.12 0.00 0.00 1.52
835 836 5.346822 GTCGTCGAGGAAAATGCTTAGTAAA 59.653 40.000 9.78 0.00 0.00 2.01
836 837 4.860907 GTCGTCGAGGAAAATGCTTAGTAA 59.139 41.667 9.78 0.00 0.00 2.24
837 838 4.418392 GTCGTCGAGGAAAATGCTTAGTA 58.582 43.478 9.78 0.00 0.00 1.82
838 839 3.251571 GTCGTCGAGGAAAATGCTTAGT 58.748 45.455 9.78 0.00 0.00 2.24
839 840 2.603560 GGTCGTCGAGGAAAATGCTTAG 59.396 50.000 9.78 0.00 0.00 2.18
840 841 2.232941 AGGTCGTCGAGGAAAATGCTTA 59.767 45.455 9.78 0.00 0.00 3.09
841 842 1.002087 AGGTCGTCGAGGAAAATGCTT 59.998 47.619 9.78 0.00 0.00 3.91
842 843 0.608640 AGGTCGTCGAGGAAAATGCT 59.391 50.000 9.78 0.00 0.00 3.79
843 844 1.128692 CAAGGTCGTCGAGGAAAATGC 59.871 52.381 9.78 0.00 0.00 3.56
844 845 1.128692 GCAAGGTCGTCGAGGAAAATG 59.871 52.381 9.78 9.66 0.00 2.32
845 846 1.270625 TGCAAGGTCGTCGAGGAAAAT 60.271 47.619 9.78 0.00 0.00 1.82
846 847 0.105224 TGCAAGGTCGTCGAGGAAAA 59.895 50.000 9.78 0.00 0.00 2.29
847 848 0.320374 ATGCAAGGTCGTCGAGGAAA 59.680 50.000 9.78 0.00 0.00 3.13
848 849 0.108804 GATGCAAGGTCGTCGAGGAA 60.109 55.000 9.78 0.00 0.00 3.36
849 850 1.511305 GATGCAAGGTCGTCGAGGA 59.489 57.895 3.17 3.17 0.00 3.71
850 851 1.874019 CGATGCAAGGTCGTCGAGG 60.874 63.158 0.00 0.00 45.47 4.63
851 852 3.680525 CGATGCAAGGTCGTCGAG 58.319 61.111 0.00 0.00 45.47 4.04
856 857 3.245284 CCTTTACATACGATGCAAGGTCG 59.755 47.826 6.65 6.65 44.26 4.79
857 858 3.002348 GCCTTTACATACGATGCAAGGTC 59.998 47.826 17.85 11.71 42.19 3.85
858 859 2.943033 GCCTTTACATACGATGCAAGGT 59.057 45.455 17.85 0.00 42.19 3.50
859 860 2.290641 GGCCTTTACATACGATGCAAGG 59.709 50.000 0.00 15.11 42.68 3.61
860 861 3.206150 AGGCCTTTACATACGATGCAAG 58.794 45.455 0.00 0.00 0.00 4.01
861 862 3.275617 AGGCCTTTACATACGATGCAA 57.724 42.857 0.00 0.00 0.00 4.08
862 863 4.409718 TTAGGCCTTTACATACGATGCA 57.590 40.909 12.58 0.00 0.00 3.96
863 864 5.744666 TTTTAGGCCTTTACATACGATGC 57.255 39.130 12.58 0.00 0.00 3.91
864 865 6.317893 AGGTTTTTAGGCCTTTACATACGATG 59.682 38.462 12.58 0.00 0.00 3.84
865 866 6.420638 AGGTTTTTAGGCCTTTACATACGAT 58.579 36.000 12.58 0.00 0.00 3.73
866 867 5.807909 AGGTTTTTAGGCCTTTACATACGA 58.192 37.500 12.58 0.00 0.00 3.43
867 868 5.065602 GGAGGTTTTTAGGCCTTTACATACG 59.934 44.000 12.58 0.00 34.81 3.06
868 869 5.065602 CGGAGGTTTTTAGGCCTTTACATAC 59.934 44.000 12.58 1.59 34.81 2.39
869 870 5.045724 TCGGAGGTTTTTAGGCCTTTACATA 60.046 40.000 12.58 0.00 34.81 2.29
870 871 4.014406 CGGAGGTTTTTAGGCCTTTACAT 58.986 43.478 12.58 1.29 34.81 2.29
871 872 3.072768 TCGGAGGTTTTTAGGCCTTTACA 59.927 43.478 12.58 0.00 34.81 2.41
872 873 3.678289 TCGGAGGTTTTTAGGCCTTTAC 58.322 45.455 12.58 3.98 34.81 2.01
873 874 4.370094 TTCGGAGGTTTTTAGGCCTTTA 57.630 40.909 12.58 0.00 34.81 1.85
874 875 2.963599 TCGGAGGTTTTTAGGCCTTT 57.036 45.000 12.58 0.00 34.81 3.11
875 876 2.963599 TTCGGAGGTTTTTAGGCCTT 57.036 45.000 12.58 0.00 34.81 4.35
876 877 2.963599 TTTCGGAGGTTTTTAGGCCT 57.036 45.000 11.78 11.78 37.91 5.19
877 878 4.021807 TGAAATTTCGGAGGTTTTTAGGCC 60.022 41.667 13.34 0.00 0.00 5.19
878 879 5.128992 TGAAATTTCGGAGGTTTTTAGGC 57.871 39.130 13.34 0.00 0.00 3.93
879 880 6.156519 CCTTGAAATTTCGGAGGTTTTTAGG 58.843 40.000 22.87 10.21 31.97 2.69
880 881 6.745116 ACCTTGAAATTTCGGAGGTTTTTAG 58.255 36.000 27.59 12.02 40.97 1.85
881 882 6.718522 ACCTTGAAATTTCGGAGGTTTTTA 57.281 33.333 27.59 2.72 40.97 1.52
882 883 5.607939 ACCTTGAAATTTCGGAGGTTTTT 57.392 34.783 27.59 13.99 40.97 1.94
883 884 5.105106 ACAACCTTGAAATTTCGGAGGTTTT 60.105 36.000 33.98 29.37 45.78 2.43
884 885 4.404394 ACAACCTTGAAATTTCGGAGGTTT 59.596 37.500 33.98 26.58 45.78 3.27
886 887 3.562182 ACAACCTTGAAATTTCGGAGGT 58.438 40.909 27.59 27.59 43.69 3.85
887 888 4.760204 AGTACAACCTTGAAATTTCGGAGG 59.240 41.667 26.64 26.64 38.41 4.30
888 889 5.106673 GGAGTACAACCTTGAAATTTCGGAG 60.107 44.000 16.35 14.18 0.00 4.63
889 890 4.758165 GGAGTACAACCTTGAAATTTCGGA 59.242 41.667 16.35 6.53 0.00 4.55
890 891 4.517453 TGGAGTACAACCTTGAAATTTCGG 59.483 41.667 13.34 11.41 0.00 4.30
891 892 5.682943 TGGAGTACAACCTTGAAATTTCG 57.317 39.130 13.34 2.16 0.00 3.46
892 893 7.435192 CACTTTGGAGTACAACCTTGAAATTTC 59.565 37.037 11.41 11.41 39.19 2.17
893 894 7.123547 TCACTTTGGAGTACAACCTTGAAATTT 59.876 33.333 9.82 0.00 39.19 1.82
894 895 6.605594 TCACTTTGGAGTACAACCTTGAAATT 59.394 34.615 9.82 0.00 39.19 1.82
895 896 6.126409 TCACTTTGGAGTACAACCTTGAAAT 58.874 36.000 9.82 0.00 39.19 2.17
896 897 5.502079 TCACTTTGGAGTACAACCTTGAAA 58.498 37.500 9.82 3.12 39.19 2.69
897 898 5.105567 TCACTTTGGAGTACAACCTTGAA 57.894 39.130 9.82 3.29 39.19 2.69
898 899 4.764050 TCACTTTGGAGTACAACCTTGA 57.236 40.909 9.82 0.00 39.19 3.02
899 900 5.643777 CCTATCACTTTGGAGTACAACCTTG 59.356 44.000 9.82 0.00 39.19 3.61
900 901 5.803470 GCCTATCACTTTGGAGTACAACCTT 60.803 44.000 9.82 0.00 39.19 3.50
901 902 4.323562 GCCTATCACTTTGGAGTACAACCT 60.324 45.833 9.82 0.00 39.19 3.50
902 903 3.939592 GCCTATCACTTTGGAGTACAACC 59.060 47.826 0.00 0.00 39.19 3.77
903 904 4.392138 GTGCCTATCACTTTGGAGTACAAC 59.608 45.833 0.00 0.00 42.38 3.32
904 905 4.564821 GGTGCCTATCACTTTGGAGTACAA 60.565 45.833 0.00 0.00 44.98 2.41
905 906 3.055385 GGTGCCTATCACTTTGGAGTACA 60.055 47.826 0.00 0.00 44.98 2.90
906 907 3.055385 TGGTGCCTATCACTTTGGAGTAC 60.055 47.826 0.00 0.00 44.98 2.73
907 908 3.178046 TGGTGCCTATCACTTTGGAGTA 58.822 45.455 0.00 0.00 44.98 2.59
908 909 1.985159 TGGTGCCTATCACTTTGGAGT 59.015 47.619 0.00 0.00 44.98 3.85
909 910 2.787473 TGGTGCCTATCACTTTGGAG 57.213 50.000 0.00 0.00 44.98 3.86
910 911 2.575735 TGATGGTGCCTATCACTTTGGA 59.424 45.455 0.00 0.00 44.98 3.53
911 912 3.003394 TGATGGTGCCTATCACTTTGG 57.997 47.619 0.00 0.00 44.98 3.28
912 913 4.201657 TCATGATGGTGCCTATCACTTTG 58.798 43.478 0.00 0.82 44.98 2.77
913 914 4.164796 TCTCATGATGGTGCCTATCACTTT 59.835 41.667 0.00 0.00 44.98 2.66
924 925 2.768698 GAGATGCCTCTCATGATGGTG 58.231 52.381 13.50 0.00 46.13 4.17
940 941 1.695597 CCCCCTTGGCCTCTGAGAT 60.696 63.158 3.32 0.00 0.00 2.75
945 946 0.776080 TTTTCTCCCCCTTGGCCTCT 60.776 55.000 3.32 0.00 0.00 3.69
946 947 0.323816 CTTTTCTCCCCCTTGGCCTC 60.324 60.000 3.32 0.00 0.00 4.70
947 948 0.776080 TCTTTTCTCCCCCTTGGCCT 60.776 55.000 3.32 0.00 0.00 5.19
949 950 2.009681 TTTCTTTTCTCCCCCTTGGC 57.990 50.000 0.00 0.00 0.00 4.52
951 952 5.453339 GGTTTCTTTTCTTTTCTCCCCCTTG 60.453 44.000 0.00 0.00 0.00 3.61
953 954 4.223953 GGTTTCTTTTCTTTTCTCCCCCT 58.776 43.478 0.00 0.00 0.00 4.79
954 955 3.323979 GGGTTTCTTTTCTTTTCTCCCCC 59.676 47.826 0.00 0.00 0.00 5.40
974 975 0.849540 AAGGTTCTAGGGGGTTGGGG 60.850 60.000 0.00 0.00 0.00 4.96
977 978 0.698818 AGCAAGGTTCTAGGGGGTTG 59.301 55.000 0.00 0.00 0.00 3.77
1129 1130 1.152830 GGGAGGAGAGAGGAGCGAT 59.847 63.158 0.00 0.00 0.00 4.58
1134 1135 1.349542 CGGAGAGGGAGGAGAGAGGA 61.350 65.000 0.00 0.00 0.00 3.71
1298 1299 2.455674 TATTCCCCGAATCATCTGCG 57.544 50.000 0.00 0.00 33.95 5.18
1319 1320 8.740123 TTGTTAAAACTTCAGATGAACCAGTA 57.260 30.769 0.00 0.00 0.00 2.74
1336 1337 5.163499 GCGGGACCATAATCCATTGTTAAAA 60.163 40.000 0.00 0.00 40.96 1.52
1338 1339 3.886505 GCGGGACCATAATCCATTGTTAA 59.113 43.478 0.00 0.00 40.96 2.01
1522 1523 1.487976 TCATCAGCTTGGTCATCCTCC 59.512 52.381 0.00 0.00 34.23 4.30
1537 1538 2.807967 CTGTTTCTTGCCGTCTTCATCA 59.192 45.455 0.00 0.00 0.00 3.07
1538 1539 2.160417 CCTGTTTCTTGCCGTCTTCATC 59.840 50.000 0.00 0.00 0.00 2.92
1539 1540 2.154462 CCTGTTTCTTGCCGTCTTCAT 58.846 47.619 0.00 0.00 0.00 2.57
1570 1571 1.663695 ACTTATTTGGGACATCGCCG 58.336 50.000 0.00 0.00 39.30 6.46
1605 1606 2.224523 ACTCCTTTGCGAATCCTCACAA 60.225 45.455 0.00 0.00 0.00 3.33
1710 1723 0.106149 AGTTCCACTTCCACGACCAC 59.894 55.000 0.00 0.00 0.00 4.16
1711 1724 0.105964 CAGTTCCACTTCCACGACCA 59.894 55.000 0.00 0.00 0.00 4.02
1712 1725 1.228657 GCAGTTCCACTTCCACGACC 61.229 60.000 0.00 0.00 0.00 4.79
1713 1726 0.249911 AGCAGTTCCACTTCCACGAC 60.250 55.000 0.00 0.00 0.00 4.34
1714 1727 0.468226 AAGCAGTTCCACTTCCACGA 59.532 50.000 0.00 0.00 0.00 4.35
1715 1728 1.264288 GAAAGCAGTTCCACTTCCACG 59.736 52.381 0.00 0.00 0.00 4.94
1716 1729 2.291741 CTGAAAGCAGTTCCACTTCCAC 59.708 50.000 0.00 0.00 37.37 4.02
1717 1730 2.575532 CTGAAAGCAGTTCCACTTCCA 58.424 47.619 0.00 0.00 37.37 3.53
1718 1731 1.882623 CCTGAAAGCAGTTCCACTTCC 59.117 52.381 0.00 0.00 40.63 3.46
1719 1732 2.576615 ACCTGAAAGCAGTTCCACTTC 58.423 47.619 0.00 0.00 40.63 3.01
1720 1733 2.736670 ACCTGAAAGCAGTTCCACTT 57.263 45.000 0.00 0.00 40.63 3.16
1721 1734 2.736670 AACCTGAAAGCAGTTCCACT 57.263 45.000 0.00 0.00 40.63 4.00
1832 1853 3.637821 AGCTCCCCAGGAATATCACTA 57.362 47.619 0.00 0.00 0.00 2.74
1838 1859 2.568546 TCTGAAGCTCCCCAGGAATA 57.431 50.000 9.82 0.00 0.00 1.75
1988 2009 5.319043 TGAACTTTCACCCTATTCAACCT 57.681 39.130 0.00 0.00 31.01 3.50
1997 2018 7.898014 AGAAATAAACTTGAACTTTCACCCT 57.102 32.000 0.00 0.00 36.83 4.34
1999 2020 9.581099 TGAAAGAAATAAACTTGAACTTTCACC 57.419 29.630 0.00 0.00 43.19 4.02
2011 2032 6.782494 ACCACCCAGATTGAAAGAAATAAACT 59.218 34.615 0.00 0.00 0.00 2.66
2115 3700 8.564574 ACATAACACATAACAAAGGTTACACAG 58.435 33.333 0.00 0.00 41.99 3.66
2172 3757 9.953697 GGTAACATGACACATAACAAAGTTAAA 57.046 29.630 0.00 0.00 0.00 1.52
2173 3758 9.121658 TGGTAACATGACACATAACAAAGTTAA 57.878 29.630 0.00 0.00 46.17 2.01
2174 3759 8.678593 TGGTAACATGACACATAACAAAGTTA 57.321 30.769 0.00 0.00 46.17 2.24
2175 3760 7.575414 TGGTAACATGACACATAACAAAGTT 57.425 32.000 0.00 0.00 46.17 2.66
2217 3802 6.418585 ACTATAGCTAAAACAAAGTTCCGC 57.581 37.500 0.00 0.00 0.00 5.54
2262 3850 6.128742 GCTTAATCTTGACAACCAAATGCAAG 60.129 38.462 0.00 0.00 36.57 4.01
2470 4537 6.253013 GCTGTTTTTGTACAACTTTCGTACT 58.747 36.000 8.07 0.00 39.96 2.73
2490 4557 5.297547 ACGATCCATATTAATTGACGCTGT 58.702 37.500 0.00 0.00 0.00 4.40
2513 4580 6.899075 TGCCAGAAGTTTAATAGTACTCCCTA 59.101 38.462 0.00 0.00 0.00 3.53
2549 4616 3.689161 TGGATATCAACCAAAGCTTGTCG 59.311 43.478 0.00 0.00 34.25 4.35
2561 4628 4.402155 TCATTGGGCTGTTTGGATATCAAC 59.598 41.667 4.83 2.13 34.67 3.18
2566 4633 5.022122 TCAAATCATTGGGCTGTTTGGATA 58.978 37.500 0.00 0.00 37.15 2.59
2592 4659 4.916041 ATTTGGACTGAGATGACCTTCA 57.084 40.909 0.00 0.00 0.00 3.02
2636 4703 8.563289 CGAAGCTCGAAAAAGTAGATATAGTT 57.437 34.615 0.00 0.00 43.74 2.24
2672 4739 9.683069 ACTGAACAAATCATGAATGACTTAAAC 57.317 29.630 16.28 3.43 40.03 2.01
2700 4767 1.232909 TCCCTTGGGTTTAACCACCA 58.767 50.000 16.58 2.66 41.02 4.17
2953 5180 7.220875 GTGTCTGTTTTCAAGATTTTTGACTCC 59.779 37.037 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.