Multiple sequence alignment - TraesCS1B01G288300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G288300 chr1B 100.000 5159 0 0 1 5159 502635848 502641006 0.000000e+00 9527.0
1 TraesCS1B01G288300 chr1B 80.321 249 41 6 4 250 26639341 26639099 1.140000e-41 182.0
2 TraesCS1B01G288300 chr1B 83.871 186 27 3 11 194 8119850 8120034 1.910000e-39 174.0
3 TraesCS1B01G288300 chr1B 90.164 61 3 1 5099 5159 681004887 681004830 5.540000e-10 76.8
4 TraesCS1B01G288300 chr1D 95.236 2540 93 8 2098 4611 376098150 376100687 0.000000e+00 3995.0
5 TraesCS1B01G288300 chr1D 88.986 1716 98 31 425 2111 376096426 376098079 0.000000e+00 2037.0
6 TraesCS1B01G288300 chr1A 90.438 2123 144 23 11 2111 475308631 475310716 0.000000e+00 2741.0
7 TraesCS1B01G288300 chr1A 97.128 1532 44 0 2836 4367 475311685 475313216 0.000000e+00 2586.0
8 TraesCS1B01G288300 chr1A 95.556 1260 48 3 3116 4367 475409850 475411109 0.000000e+00 2010.0
9 TraesCS1B01G288300 chr1A 93.893 393 16 4 4364 4751 475411189 475411578 2.070000e-163 586.0
10 TraesCS1B01G288300 chr1A 93.893 393 14 6 4364 4751 475313525 475313912 7.440000e-163 584.0
11 TraesCS1B01G288300 chr1A 94.444 378 21 0 2098 2475 475310752 475311129 2.680000e-162 582.0
12 TraesCS1B01G288300 chr1A 90.355 394 21 4 2472 2852 475311284 475311673 7.710000e-138 501.0
13 TraesCS1B01G288300 chr4A 87.703 2407 203 43 2098 4448 701985701 701988070 0.000000e+00 2719.0
14 TraesCS1B01G288300 chr4A 93.094 362 24 1 4493 4853 701997607 701997968 3.540000e-146 529.0
15 TraesCS1B01G288300 chr4A 85.396 404 56 1 1113 1516 701985153 701985553 2.870000e-112 416.0
16 TraesCS1B01G288300 chr4A 91.892 259 17 4 820 1076 701984810 701985066 4.910000e-95 359.0
17 TraesCS1B01G288300 chr4A 98.000 50 1 0 5091 5140 615525513 615525464 2.560000e-13 87.9
18 TraesCS1B01G288300 chr3A 76.164 365 72 8 4 355 202965869 202966231 1.480000e-40 178.0
19 TraesCS1B01G288300 chr7B 85.811 148 20 1 4 150 709470225 709470078 6.920000e-34 156.0
20 TraesCS1B01G288300 chr6A 82.258 186 27 5 4 188 30879909 30880089 6.920000e-34 156.0
21 TraesCS1B01G288300 chr6A 100.000 44 0 0 5097 5140 572215189 572215146 1.190000e-11 82.4
22 TraesCS1B01G288300 chr4D 85.811 148 20 1 4 150 369311355 369311502 6.920000e-34 156.0
23 TraesCS1B01G288300 chr5A 85.417 144 19 2 4 146 126099007 126098865 1.160000e-31 148.0
24 TraesCS1B01G288300 chr5D 84.783 138 17 4 13 148 233950969 233950834 9.010000e-28 135.0
25 TraesCS1B01G288300 chr5D 97.917 48 1 0 5093 5140 51699300 51699347 3.310000e-12 84.2
26 TraesCS1B01G288300 chrUn 95.161 62 2 1 5098 5159 92978885 92978825 4.250000e-16 97.1
27 TraesCS1B01G288300 chr3B 96.226 53 2 0 5088 5140 793269105 793269157 2.560000e-13 87.9
28 TraesCS1B01G288300 chr7D 89.855 69 4 1 5094 5159 40483629 40483561 9.200000e-13 86.1
29 TraesCS1B01G288300 chr2B 93.103 58 3 1 5084 5140 7580126 7580069 3.310000e-12 84.2
30 TraesCS1B01G288300 chr5B 90.476 63 1 1 5099 5156 660271182 660271244 1.540000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G288300 chr1B 502635848 502641006 5158 False 9527.000000 9527 100.000000 1 5159 1 chr1B.!!$F2 5158
1 TraesCS1B01G288300 chr1D 376096426 376100687 4261 False 3016.000000 3995 92.111000 425 4611 2 chr1D.!!$F1 4186
2 TraesCS1B01G288300 chr1A 475308631 475313912 5281 False 1398.800000 2741 93.251600 11 4751 5 chr1A.!!$F1 4740
3 TraesCS1B01G288300 chr1A 475409850 475411578 1728 False 1298.000000 2010 94.724500 3116 4751 2 chr1A.!!$F2 1635
4 TraesCS1B01G288300 chr4A 701984810 701988070 3260 False 1164.666667 2719 88.330333 820 4448 3 chr4A.!!$F2 3628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
403 416 0.103937 GATGGAGGCGGAGAACTCTG 59.896 60.0 6.31 6.31 38.96 3.35 F
1695 1780 0.035056 GGCTGCCTGATGTACCAAGT 60.035 55.0 12.43 0.00 0.00 3.16 F
3037 3452 0.826715 TGGCTCTCTGTATGGCTGTC 59.173 55.0 0.00 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2384 2587 0.883153 CAGCAAGCAACATAGTGGCA 59.117 50.0 0.0 0.0 34.42 4.92 R
3641 4068 0.578683 CGGTCATGATAACTGCTGCG 59.421 55.0 0.0 0.0 0.00 5.18 R
4904 5664 0.102120 TGTTTTGCTTTGCAGACCGG 59.898 50.0 0.0 0.0 40.61 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.354467 TCTCTAAGAGGAAGACCGGAAC 58.646 50.000 9.46 0.99 41.83 3.62
27 28 1.481363 CTAAGAGGAAGACCGGAACCC 59.519 57.143 9.46 3.35 41.83 4.11
36 37 4.729856 CCGGAACCCGTCGGTGTC 62.730 72.222 11.06 6.71 46.80 3.67
46 47 1.433879 GTCGGTGTCCAGATCGAGG 59.566 63.158 0.00 1.18 32.09 4.63
63 64 2.409870 GGAGGCCGGCATGAAACAG 61.410 63.158 30.85 0.00 0.00 3.16
67 68 1.353103 GCCGGCATGAAACAGATCG 59.647 57.895 24.80 0.00 0.00 3.69
82 84 1.134965 AGATCGAAGTTTGGAGCTCGG 60.135 52.381 7.83 0.00 24.46 4.63
92 94 1.153667 GGAGCTCGGAGAACAGCAG 60.154 63.158 9.69 0.00 38.18 4.24
93 95 1.809209 GAGCTCGGAGAACAGCAGC 60.809 63.158 9.69 0.00 38.18 5.25
123 125 2.851588 GGGCCTCCTCTGGATCCC 60.852 72.222 9.90 7.86 37.28 3.85
126 128 2.503382 GCCTCCTCTGGATCCCGAC 61.503 68.421 9.90 0.00 0.00 4.79
127 129 1.075970 CCTCCTCTGGATCCCGACA 60.076 63.158 9.90 0.00 0.00 4.35
140 142 4.227134 CGACAGGCCGGATCTGGG 62.227 72.222 22.38 10.62 36.62 4.45
156 158 4.643387 GGCAGTGCCTCACCCGTT 62.643 66.667 27.48 0.00 46.69 4.44
158 160 2.358737 CAGTGCCTCACCCGTTCC 60.359 66.667 0.00 0.00 34.49 3.62
159 161 3.637273 AGTGCCTCACCCGTTCCC 61.637 66.667 0.00 0.00 34.49 3.97
160 162 4.717313 GTGCCTCACCCGTTCCCC 62.717 72.222 0.00 0.00 0.00 4.81
200 202 4.988716 ACTGCGACCGGACCTCCA 62.989 66.667 9.46 0.00 35.14 3.86
204 206 3.138798 CGACCGGACCTCCACGAT 61.139 66.667 9.46 0.00 35.14 3.73
207 209 2.005960 GACCGGACCTCCACGATCAG 62.006 65.000 9.46 0.00 35.14 2.90
210 212 1.109920 CGGACCTCCACGATCAGGAT 61.110 60.000 3.90 0.00 33.99 3.24
228 230 2.552031 GATGAAGAACCTAAGACCGGC 58.448 52.381 0.00 0.00 0.00 6.13
236 238 2.284331 TAAGACCGGCTGCCTCCA 60.284 61.111 17.92 0.00 0.00 3.86
313 319 4.082523 CGTCGAGCCCCCACACAT 62.083 66.667 0.00 0.00 0.00 3.21
315 321 3.716195 TCGAGCCCCCACACATGG 61.716 66.667 0.00 0.00 46.81 3.66
324 330 4.950479 CACACATGGAGAGGAGCC 57.050 61.111 0.00 0.00 0.00 4.70
328 334 1.692042 ACATGGAGAGGAGCCCCTG 60.692 63.158 0.00 0.00 44.53 4.45
347 360 2.892334 CGTCGGCAACACCAACCAG 61.892 63.158 0.00 0.00 39.03 4.00
355 368 0.687427 AACACCAACCAGGCTTTGCT 60.687 50.000 0.00 0.00 43.14 3.91
358 371 1.600636 CCAACCAGGCTTTGCTCGA 60.601 57.895 0.00 0.00 0.00 4.04
397 410 3.758133 GAGGGGATGGAGGCGGAGA 62.758 68.421 0.00 0.00 0.00 3.71
403 416 0.103937 GATGGAGGCGGAGAACTCTG 59.896 60.000 6.31 6.31 38.96 3.35
412 425 3.708220 GAGAACTCTGCTCCGGCGG 62.708 68.421 22.51 22.51 45.61 6.13
422 435 3.735037 CTCCGGCGGCTAGGGTTTC 62.735 68.421 23.83 0.00 0.00 2.78
423 436 3.782443 CCGGCGGCTAGGGTTTCT 61.782 66.667 15.42 0.00 0.00 2.52
439 452 3.586961 CTCCCTCGATCGCTCGCA 61.587 66.667 11.09 0.00 44.65 5.10
454 467 3.749064 GCAGGAGCGACGTGAGGA 61.749 66.667 0.00 0.00 36.62 3.71
464 477 1.249407 GACGTGAGGAGTTCAGGAGT 58.751 55.000 0.00 0.00 42.85 3.85
524 537 6.419413 TGAATCAAACAAATGGTAAAAGTCGC 59.581 34.615 0.00 0.00 0.00 5.19
546 559 5.506317 CGCCTTGTCAAAACTCATTTCTCTT 60.506 40.000 0.00 0.00 0.00 2.85
567 580 6.394809 TCTTTTATATGTCAGAGCGTGTTCA 58.605 36.000 0.00 0.00 0.00 3.18
607 621 7.760340 CGTCTAGTAGGCTTCTAAAATTCAACT 59.240 37.037 0.00 0.00 0.00 3.16
630 644 0.858369 TAGATAGTCCGGGCTTCCCT 59.142 55.000 17.04 11.88 42.67 4.20
635 649 0.837940 AGTCCGGGCTTCCCTAAATC 59.162 55.000 0.35 0.00 42.67 2.17
636 650 0.532196 GTCCGGGCTTCCCTAAATCG 60.532 60.000 0.00 0.00 42.67 3.34
638 652 0.179468 CCGGGCTTCCCTAAATCGAA 59.821 55.000 0.00 0.00 42.67 3.71
651 665 8.430573 TCCCTAAATCGAAACCATATATGAGA 57.569 34.615 14.54 5.92 0.00 3.27
676 691 5.699143 AGAAATATGATTGTCCAGAAGGGG 58.301 41.667 0.00 0.00 37.22 4.79
677 692 4.459852 AATATGATTGTCCAGAAGGGGG 57.540 45.455 0.00 0.00 37.22 5.40
688 703 2.436173 CCAGAAGGGGGTGATTAGAGAC 59.564 54.545 0.00 0.00 0.00 3.36
741 757 5.335127 CAAGAGGTGAGGCGAAAATAAATG 58.665 41.667 0.00 0.00 0.00 2.32
908 927 0.736053 CTGTCTGCCTCGTACTCCTC 59.264 60.000 0.00 0.00 0.00 3.71
927 946 1.184431 CAATTACCATGGCCTGCACA 58.816 50.000 13.04 0.00 0.00 4.57
983 1002 2.157421 GCTCGGTCAGCTTCAGTTG 58.843 57.895 0.00 0.00 45.83 3.16
1413 1482 2.260434 CGGGTCGTCATGTCCGTT 59.740 61.111 7.27 0.00 37.92 4.44
1416 1485 1.666553 GGTCGTCATGTCCGTTGCA 60.667 57.895 7.27 0.00 0.00 4.08
1543 1620 5.533903 AGCAGAAACTGAAGTGAATGTCATT 59.466 36.000 0.00 0.00 32.44 2.57
1544 1621 6.040166 AGCAGAAACTGAAGTGAATGTCATTT 59.960 34.615 0.00 0.00 32.44 2.32
1545 1622 6.698766 GCAGAAACTGAAGTGAATGTCATTTT 59.301 34.615 0.00 0.00 32.44 1.82
1546 1623 7.306399 GCAGAAACTGAAGTGAATGTCATTTTG 60.306 37.037 0.00 0.00 32.44 2.44
1692 1777 4.152248 AGGCTGCCTGATGTACCA 57.848 55.556 22.71 0.00 29.57 3.25
1694 1779 0.254178 AGGCTGCCTGATGTACCAAG 59.746 55.000 22.71 0.00 29.57 3.61
1695 1780 0.035056 GGCTGCCTGATGTACCAAGT 60.035 55.000 12.43 0.00 0.00 3.16
1786 1886 1.043816 TTTCAAGGGCCGATTTTGCA 58.956 45.000 0.00 0.00 0.00 4.08
1926 2027 5.305128 ACAATTGGACACTTGAAACATCCAT 59.695 36.000 10.83 0.00 39.18 3.41
2159 2356 2.671130 AAAACAAACACAGCCACCTG 57.329 45.000 0.00 0.00 44.80 4.00
2180 2377 2.895404 GCCCCCTTACTGTCATATCGTA 59.105 50.000 0.00 0.00 0.00 3.43
2198 2395 2.093625 CGTACATGGTTGGTGATGTTCG 59.906 50.000 0.00 0.00 37.14 3.95
2206 2403 4.155826 TGGTTGGTGATGTTCGAATTGATC 59.844 41.667 0.00 4.58 0.00 2.92
2207 2404 4.155826 GGTTGGTGATGTTCGAATTGATCA 59.844 41.667 0.00 7.22 0.00 2.92
2229 2426 6.811954 TCAACTCAAGGTTAAATTTTCCCAC 58.188 36.000 0.00 0.00 36.23 4.61
2297 2500 1.852157 TTGGAGGAGCTTTGGCGGAT 61.852 55.000 0.00 0.00 44.37 4.18
2384 2587 2.074948 ATGGGCCGCCTCTCAATCT 61.075 57.895 9.86 0.00 0.00 2.40
2444 2647 1.340889 GCAGAAGGTGTTGCATTTCCA 59.659 47.619 0.00 0.00 40.02 3.53
2456 2659 2.288948 TGCATTTCCAACAATGAGCACC 60.289 45.455 0.00 0.00 36.39 5.01
2459 2662 4.634199 CATTTCCAACAATGAGCACCTTT 58.366 39.130 0.00 0.00 36.39 3.11
2475 2836 7.556996 TGAGCACCTTTTTACCAAAGTAAGTAA 59.443 33.333 0.00 0.00 39.58 2.24
2489 2850 7.827236 CCAAAGTAAGTAACTCATATCACCCAA 59.173 37.037 0.00 0.00 37.50 4.12
2649 3017 9.755804 TTGAGATCAATCACAGTAGTATTCATC 57.244 33.333 0.00 0.00 0.00 2.92
2779 3147 8.353684 ACAGATATCAGTAACCGATTCTACTTG 58.646 37.037 5.32 0.00 0.00 3.16
3037 3452 0.826715 TGGCTCTCTGTATGGCTGTC 59.173 55.000 0.00 0.00 0.00 3.51
3062 3477 6.986817 CGAATGTAGAAAGTGACCCTATTGAT 59.013 38.462 0.00 0.00 0.00 2.57
3325 3743 3.586429 TGTCCTACTATCATGGATGCCA 58.414 45.455 0.00 0.00 38.19 4.92
3370 3788 8.246180 TGTCATCAAAGCTTCTAAAATCATTCC 58.754 33.333 0.00 0.00 0.00 3.01
3389 3807 2.109128 TCCAATGGGTCTGCCTTACAAA 59.891 45.455 0.00 0.00 34.93 2.83
3424 3843 5.006746 GCTGTTGTTTCTGACTATTATCCCG 59.993 44.000 0.00 0.00 0.00 5.14
3602 4029 2.110188 TGGTTTTATTGGGCCAGGTGTA 59.890 45.455 6.23 0.00 0.00 2.90
3641 4068 1.175983 TTGCCCAAACACCATCGGTC 61.176 55.000 0.00 0.00 31.02 4.79
3669 4096 1.681486 TATCATGACCGCCGCCTTGA 61.681 55.000 0.00 0.00 0.00 3.02
3737 4164 3.238108 ACTACTGCTCATGTTTCCTCG 57.762 47.619 0.00 0.00 0.00 4.63
4089 4522 0.119358 AGGCCTTCCTCACCCTAACT 59.881 55.000 0.00 0.00 38.72 2.24
4107 4540 1.276421 ACTGCGGTGCTCTATTTCAGT 59.724 47.619 0.00 0.00 0.00 3.41
4177 4619 7.861630 TGACTGAGCTGAAAAATACTGTTAAC 58.138 34.615 0.00 0.00 0.00 2.01
4250 4693 7.005380 CGCAGAGCAAAGAAACAAATAAAATG 58.995 34.615 0.00 0.00 0.00 2.32
4252 4695 8.715088 GCAGAGCAAAGAAACAAATAAAATGAT 58.285 29.630 0.00 0.00 0.00 2.45
4297 4740 0.035317 AAGACTGAGCGCAACCATGA 59.965 50.000 11.47 0.00 0.00 3.07
4346 4789 3.868077 GGAATGTGGAGATCTCTTCAACG 59.132 47.826 21.81 0.00 32.30 4.10
4350 4793 4.956085 TGTGGAGATCTCTTCAACGAAAA 58.044 39.130 21.81 0.00 32.30 2.29
4639 5398 5.530915 TGACAATTCATATGACCGAAATCCC 59.469 40.000 4.48 0.00 0.00 3.85
4686 5445 5.682943 TTGTTCGAAACTGGAATAACCTG 57.317 39.130 0.00 0.00 42.26 4.00
4687 5446 4.069304 TGTTCGAAACTGGAATAACCTGG 58.931 43.478 0.00 0.00 41.11 4.45
4712 5472 6.396450 AGACAGAAAACGGTCTATTAGGAAC 58.604 40.000 0.00 0.00 42.30 3.62
4714 5474 6.164176 ACAGAAAACGGTCTATTAGGAACTG 58.836 40.000 0.00 0.00 41.52 3.16
4721 5481 4.403432 CGGTCTATTAGGAACTGGGTACAA 59.597 45.833 0.00 0.00 41.52 2.41
4729 5489 4.461198 AGGAACTGGGTACAAGAAACTTG 58.539 43.478 9.51 9.51 37.18 3.16
4733 5493 3.053917 ACTGGGTACAAGAAACTTGGTGT 60.054 43.478 14.51 0.00 0.00 4.16
4751 5511 4.586421 TGGTGTTTGCCTAAATTCACATGA 59.414 37.500 0.00 0.00 0.00 3.07
4752 5512 5.245751 TGGTGTTTGCCTAAATTCACATGAT 59.754 36.000 0.00 0.00 0.00 2.45
4753 5513 6.165577 GGTGTTTGCCTAAATTCACATGATT 58.834 36.000 0.00 0.00 0.00 2.57
4754 5514 6.091169 GGTGTTTGCCTAAATTCACATGATTG 59.909 38.462 0.00 0.00 0.00 2.67
4755 5515 6.646240 GTGTTTGCCTAAATTCACATGATTGT 59.354 34.615 0.00 0.00 36.15 2.71
4776 5536 9.941664 GATTGTGTTATCATATTGTTTCAGAGG 57.058 33.333 0.00 0.00 0.00 3.69
4777 5537 9.685276 ATTGTGTTATCATATTGTTTCAGAGGA 57.315 29.630 0.00 0.00 0.00 3.71
4778 5538 9.685276 TTGTGTTATCATATTGTTTCAGAGGAT 57.315 29.630 0.00 0.00 0.00 3.24
4779 5539 9.112725 TGTGTTATCATATTGTTTCAGAGGATG 57.887 33.333 0.00 0.00 0.00 3.51
4780 5540 8.562892 GTGTTATCATATTGTTTCAGAGGATGG 58.437 37.037 0.00 0.00 0.00 3.51
4781 5541 8.274322 TGTTATCATATTGTTTCAGAGGATGGT 58.726 33.333 0.00 0.00 0.00 3.55
4782 5542 9.778741 GTTATCATATTGTTTCAGAGGATGGTA 57.221 33.333 0.00 0.00 0.00 3.25
4798 5558 4.925068 GATGGTATCCAGTCATTTGTTGC 58.075 43.478 0.00 0.00 36.75 4.17
4799 5559 3.760738 TGGTATCCAGTCATTTGTTGCA 58.239 40.909 0.00 0.00 0.00 4.08
4800 5560 3.758023 TGGTATCCAGTCATTTGTTGCAG 59.242 43.478 0.00 0.00 0.00 4.41
4801 5561 3.129287 GGTATCCAGTCATTTGTTGCAGG 59.871 47.826 0.00 0.00 0.00 4.85
4802 5562 1.619654 TCCAGTCATTTGTTGCAGGG 58.380 50.000 0.00 0.00 0.00 4.45
4803 5563 1.133513 TCCAGTCATTTGTTGCAGGGT 60.134 47.619 0.00 0.00 0.00 4.34
4804 5564 1.688197 CCAGTCATTTGTTGCAGGGTT 59.312 47.619 0.00 0.00 0.00 4.11
4805 5565 2.546373 CCAGTCATTTGTTGCAGGGTTG 60.546 50.000 0.00 0.00 0.00 3.77
4827 5587 3.450578 CTTCTGCAGCAAACAACATTGT 58.549 40.909 9.47 0.00 44.72 2.71
4840 5600 5.376854 ACAACATTGTTGGATGAGTAAGC 57.623 39.130 28.10 0.00 38.47 3.09
4841 5601 4.826733 ACAACATTGTTGGATGAGTAAGCA 59.173 37.500 28.10 0.00 38.47 3.91
4842 5602 5.301551 ACAACATTGTTGGATGAGTAAGCAA 59.698 36.000 28.10 0.00 38.47 3.91
4843 5603 6.015180 ACAACATTGTTGGATGAGTAAGCAAT 60.015 34.615 28.10 4.48 38.47 3.56
4844 5604 5.957798 ACATTGTTGGATGAGTAAGCAATG 58.042 37.500 11.32 11.32 43.96 2.82
4845 5605 5.105635 ACATTGTTGGATGAGTAAGCAATGG 60.106 40.000 15.61 2.50 43.20 3.16
4846 5606 4.032960 TGTTGGATGAGTAAGCAATGGT 57.967 40.909 0.00 0.00 0.00 3.55
4847 5607 4.406456 TGTTGGATGAGTAAGCAATGGTT 58.594 39.130 2.45 2.45 0.00 3.67
4848 5608 4.218200 TGTTGGATGAGTAAGCAATGGTTG 59.782 41.667 8.06 0.00 0.00 3.77
4849 5609 4.032960 TGGATGAGTAAGCAATGGTTGT 57.967 40.909 8.06 0.00 0.00 3.32
4850 5610 4.009675 TGGATGAGTAAGCAATGGTTGTC 58.990 43.478 8.06 5.32 0.00 3.18
4851 5611 4.009675 GGATGAGTAAGCAATGGTTGTCA 58.990 43.478 8.06 10.62 0.00 3.58
4852 5612 4.142600 GGATGAGTAAGCAATGGTTGTCAC 60.143 45.833 8.06 0.00 0.00 3.67
4853 5613 2.805671 TGAGTAAGCAATGGTTGTCACG 59.194 45.455 8.06 0.00 0.00 4.35
4854 5614 2.806244 GAGTAAGCAATGGTTGTCACGT 59.194 45.455 8.06 0.00 0.00 4.49
4855 5615 3.211045 AGTAAGCAATGGTTGTCACGTT 58.789 40.909 8.06 0.00 0.00 3.99
4856 5616 2.490328 AAGCAATGGTTGTCACGTTG 57.510 45.000 0.00 0.00 0.00 4.10
4857 5617 1.674359 AGCAATGGTTGTCACGTTGA 58.326 45.000 0.00 0.00 0.00 3.18
4858 5618 2.020720 AGCAATGGTTGTCACGTTGAA 58.979 42.857 0.00 0.00 0.00 2.69
4859 5619 2.033299 AGCAATGGTTGTCACGTTGAAG 59.967 45.455 0.00 0.00 0.00 3.02
4860 5620 2.858260 GCAATGGTTGTCACGTTGAAGG 60.858 50.000 0.00 0.00 0.00 3.46
4861 5621 2.616376 CAATGGTTGTCACGTTGAAGGA 59.384 45.455 0.00 0.00 0.00 3.36
4862 5622 2.404923 TGGTTGTCACGTTGAAGGAA 57.595 45.000 0.00 0.00 0.00 3.36
4863 5623 2.011222 TGGTTGTCACGTTGAAGGAAC 58.989 47.619 0.00 0.00 0.00 3.62
4865 5625 2.031683 GGTTGTCACGTTGAAGGAACTG 59.968 50.000 0.00 0.00 40.86 3.16
4866 5626 2.933906 GTTGTCACGTTGAAGGAACTGA 59.066 45.455 0.00 0.00 40.86 3.41
4867 5627 3.469008 TGTCACGTTGAAGGAACTGAT 57.531 42.857 0.00 0.00 40.86 2.90
4868 5628 3.130633 TGTCACGTTGAAGGAACTGATG 58.869 45.455 0.00 0.00 40.86 3.07
4869 5629 3.131396 GTCACGTTGAAGGAACTGATGT 58.869 45.455 0.00 0.00 40.86 3.06
4870 5630 3.560068 GTCACGTTGAAGGAACTGATGTT 59.440 43.478 0.00 0.00 40.86 2.71
4871 5631 3.559655 TCACGTTGAAGGAACTGATGTTG 59.440 43.478 0.00 0.00 40.86 3.33
4872 5632 2.878406 ACGTTGAAGGAACTGATGTTGG 59.122 45.455 0.00 0.00 40.86 3.77
4873 5633 2.878406 CGTTGAAGGAACTGATGTTGGT 59.122 45.455 0.00 0.00 40.86 3.67
4874 5634 3.303990 CGTTGAAGGAACTGATGTTGGTG 60.304 47.826 0.00 0.00 40.86 4.17
4875 5635 2.229792 TGAAGGAACTGATGTTGGTGC 58.770 47.619 0.00 0.00 40.86 5.01
4876 5636 2.158623 TGAAGGAACTGATGTTGGTGCT 60.159 45.455 0.00 0.00 40.86 4.40
4877 5637 1.901591 AGGAACTGATGTTGGTGCTG 58.098 50.000 0.00 0.00 37.18 4.41
4878 5638 0.883833 GGAACTGATGTTGGTGCTGG 59.116 55.000 0.00 0.00 36.39 4.85
4879 5639 1.545428 GGAACTGATGTTGGTGCTGGA 60.545 52.381 0.00 0.00 36.39 3.86
4880 5640 1.537202 GAACTGATGTTGGTGCTGGAC 59.463 52.381 0.00 0.00 36.39 4.02
4881 5641 0.250901 ACTGATGTTGGTGCTGGACC 60.251 55.000 11.87 11.87 46.37 4.46
4882 5642 0.037303 CTGATGTTGGTGCTGGACCT 59.963 55.000 19.43 0.00 46.32 3.85
4883 5643 0.478072 TGATGTTGGTGCTGGACCTT 59.522 50.000 19.43 1.92 46.32 3.50
4884 5644 1.133513 TGATGTTGGTGCTGGACCTTT 60.134 47.619 19.43 1.57 46.32 3.11
4885 5645 1.541588 GATGTTGGTGCTGGACCTTTC 59.458 52.381 19.43 9.84 46.32 2.62
4886 5646 0.550914 TGTTGGTGCTGGACCTTTCT 59.449 50.000 19.43 0.00 46.32 2.52
4887 5647 1.771854 TGTTGGTGCTGGACCTTTCTA 59.228 47.619 19.43 0.00 46.32 2.10
4888 5648 2.152016 GTTGGTGCTGGACCTTTCTAC 58.848 52.381 19.43 6.21 46.32 2.59
4889 5649 1.729586 TGGTGCTGGACCTTTCTACT 58.270 50.000 19.43 0.00 46.32 2.57
4890 5650 2.054799 TGGTGCTGGACCTTTCTACTT 58.945 47.619 19.43 0.00 46.32 2.24
4891 5651 2.441750 TGGTGCTGGACCTTTCTACTTT 59.558 45.455 19.43 0.00 46.32 2.66
4892 5652 2.814336 GGTGCTGGACCTTTCTACTTTG 59.186 50.000 11.48 0.00 42.25 2.77
4893 5653 3.496160 GGTGCTGGACCTTTCTACTTTGA 60.496 47.826 11.48 0.00 42.25 2.69
4894 5654 4.327680 GTGCTGGACCTTTCTACTTTGAT 58.672 43.478 0.00 0.00 0.00 2.57
4895 5655 4.762251 GTGCTGGACCTTTCTACTTTGATT 59.238 41.667 0.00 0.00 0.00 2.57
4896 5656 5.938125 GTGCTGGACCTTTCTACTTTGATTA 59.062 40.000 0.00 0.00 0.00 1.75
4897 5657 6.599638 GTGCTGGACCTTTCTACTTTGATTAT 59.400 38.462 0.00 0.00 0.00 1.28
4898 5658 6.823689 TGCTGGACCTTTCTACTTTGATTATC 59.176 38.462 0.00 0.00 0.00 1.75
4899 5659 6.261158 GCTGGACCTTTCTACTTTGATTATCC 59.739 42.308 0.00 0.00 0.00 2.59
4900 5660 6.659824 TGGACCTTTCTACTTTGATTATCCC 58.340 40.000 0.00 0.00 0.00 3.85
4901 5661 6.216662 TGGACCTTTCTACTTTGATTATCCCA 59.783 38.462 0.00 0.00 0.00 4.37
4902 5662 7.091993 TGGACCTTTCTACTTTGATTATCCCAT 60.092 37.037 0.00 0.00 0.00 4.00
4903 5663 7.229506 GGACCTTTCTACTTTGATTATCCCATG 59.770 40.741 0.00 0.00 0.00 3.66
4904 5664 6.547510 ACCTTTCTACTTTGATTATCCCATGC 59.452 38.462 0.00 0.00 0.00 4.06
4905 5665 6.015940 CCTTTCTACTTTGATTATCCCATGCC 60.016 42.308 0.00 0.00 0.00 4.40
4906 5666 4.641396 TCTACTTTGATTATCCCATGCCG 58.359 43.478 0.00 0.00 0.00 5.69
4907 5667 2.586425 ACTTTGATTATCCCATGCCGG 58.414 47.619 0.00 0.00 0.00 6.13
4908 5668 2.091885 ACTTTGATTATCCCATGCCGGT 60.092 45.455 1.90 0.00 0.00 5.28
4909 5669 2.270352 TTGATTATCCCATGCCGGTC 57.730 50.000 1.90 0.00 0.00 4.79
4910 5670 1.434188 TGATTATCCCATGCCGGTCT 58.566 50.000 1.90 0.00 0.00 3.85
4911 5671 1.072173 TGATTATCCCATGCCGGTCTG 59.928 52.381 1.90 0.11 0.00 3.51
4912 5672 0.250901 ATTATCCCATGCCGGTCTGC 60.251 55.000 1.90 0.00 0.00 4.26
4913 5673 1.631071 TTATCCCATGCCGGTCTGCA 61.631 55.000 1.90 0.00 46.94 4.41
4914 5674 1.631071 TATCCCATGCCGGTCTGCAA 61.631 55.000 1.90 0.00 45.84 4.08
4915 5675 2.497792 ATCCCATGCCGGTCTGCAAA 62.498 55.000 1.90 0.00 45.84 3.68
4916 5676 2.703798 CCCATGCCGGTCTGCAAAG 61.704 63.158 1.90 0.00 45.84 2.77
4917 5677 2.180017 CATGCCGGTCTGCAAAGC 59.820 61.111 1.90 0.00 45.84 3.51
4918 5678 2.282391 ATGCCGGTCTGCAAAGCA 60.282 55.556 1.90 0.00 45.84 3.91
4919 5679 1.902918 ATGCCGGTCTGCAAAGCAA 60.903 52.632 1.90 0.00 45.84 3.91
4920 5680 1.462731 ATGCCGGTCTGCAAAGCAAA 61.463 50.000 1.90 0.00 45.84 3.68
4921 5681 1.067250 GCCGGTCTGCAAAGCAAAA 59.933 52.632 1.90 0.00 38.41 2.44
4922 5682 1.215014 GCCGGTCTGCAAAGCAAAAC 61.215 55.000 1.90 0.00 38.41 2.43
4923 5683 0.102120 CCGGTCTGCAAAGCAAAACA 59.898 50.000 0.00 0.00 38.41 2.83
4924 5684 1.470632 CCGGTCTGCAAAGCAAAACAA 60.471 47.619 0.00 0.00 38.41 2.83
4925 5685 2.472816 CGGTCTGCAAAGCAAAACAAT 58.527 42.857 0.00 0.00 38.41 2.71
4926 5686 2.472488 CGGTCTGCAAAGCAAAACAATC 59.528 45.455 0.00 0.00 38.41 2.67
4927 5687 3.456280 GGTCTGCAAAGCAAAACAATCA 58.544 40.909 0.00 0.00 38.41 2.57
4928 5688 3.870419 GGTCTGCAAAGCAAAACAATCAA 59.130 39.130 0.00 0.00 38.41 2.57
4929 5689 4.260334 GGTCTGCAAAGCAAAACAATCAAC 60.260 41.667 0.00 0.00 38.41 3.18
4930 5690 3.870419 TCTGCAAAGCAAAACAATCAACC 59.130 39.130 0.00 0.00 38.41 3.77
4931 5691 2.941720 TGCAAAGCAAAACAATCAACCC 59.058 40.909 0.00 0.00 34.76 4.11
4932 5692 2.032979 GCAAAGCAAAACAATCAACCCG 60.033 45.455 0.00 0.00 0.00 5.28
4933 5693 2.524569 AAGCAAAACAATCAACCCGG 57.475 45.000 0.00 0.00 0.00 5.73
4934 5694 0.678950 AGCAAAACAATCAACCCGGG 59.321 50.000 22.25 22.25 0.00 5.73
4935 5695 0.676736 GCAAAACAATCAACCCGGGA 59.323 50.000 32.02 4.68 0.00 5.14
4936 5696 1.069358 GCAAAACAATCAACCCGGGAA 59.931 47.619 32.02 12.97 0.00 3.97
4937 5697 2.289382 GCAAAACAATCAACCCGGGAAT 60.289 45.455 32.02 14.91 0.00 3.01
4938 5698 3.805457 GCAAAACAATCAACCCGGGAATT 60.805 43.478 32.02 20.08 0.00 2.17
4939 5699 4.384940 CAAAACAATCAACCCGGGAATTT 58.615 39.130 32.02 8.62 0.00 1.82
4940 5700 3.676291 AACAATCAACCCGGGAATTTG 57.324 42.857 32.02 24.60 0.00 2.32
4941 5701 2.883026 ACAATCAACCCGGGAATTTGA 58.117 42.857 32.02 26.59 33.89 2.69
4942 5702 2.560981 ACAATCAACCCGGGAATTTGAC 59.439 45.455 32.02 0.00 32.21 3.18
4943 5703 1.459450 ATCAACCCGGGAATTTGACG 58.541 50.000 32.02 5.68 32.21 4.35
4944 5704 0.606944 TCAACCCGGGAATTTGACGG 60.607 55.000 32.02 5.13 46.79 4.79
4947 5707 3.899395 CCGGGAATTTGACGGGTC 58.101 61.111 0.00 0.00 43.69 4.46
4948 5708 1.003112 CCGGGAATTTGACGGGTCA 60.003 57.895 0.00 0.00 43.69 4.02
4949 5709 0.393808 CCGGGAATTTGACGGGTCAT 60.394 55.000 1.83 0.00 43.69 3.06
4950 5710 1.134340 CCGGGAATTTGACGGGTCATA 60.134 52.381 1.83 0.00 43.69 2.15
4951 5711 2.634600 CGGGAATTTGACGGGTCATAA 58.365 47.619 1.83 1.38 39.64 1.90
4952 5712 2.612212 CGGGAATTTGACGGGTCATAAG 59.388 50.000 1.83 0.00 39.64 1.73
4953 5713 2.949644 GGGAATTTGACGGGTCATAAGG 59.050 50.000 1.83 0.00 39.64 2.69
4954 5714 3.371166 GGGAATTTGACGGGTCATAAGGA 60.371 47.826 1.83 0.00 39.64 3.36
4955 5715 3.626217 GGAATTTGACGGGTCATAAGGAC 59.374 47.826 1.83 0.00 46.20 3.85
4967 5727 5.438761 GTCATAAGGACACAAAAAGCAGT 57.561 39.130 0.00 0.00 46.19 4.40
4968 5728 6.554334 GTCATAAGGACACAAAAAGCAGTA 57.446 37.500 0.00 0.00 46.19 2.74
4969 5729 6.371389 GTCATAAGGACACAAAAAGCAGTAC 58.629 40.000 0.00 0.00 46.19 2.73
4970 5730 3.963383 AAGGACACAAAAAGCAGTACG 57.037 42.857 0.00 0.00 0.00 3.67
4971 5731 3.188159 AGGACACAAAAAGCAGTACGA 57.812 42.857 0.00 0.00 0.00 3.43
4972 5732 3.537580 AGGACACAAAAAGCAGTACGAA 58.462 40.909 0.00 0.00 0.00 3.85
4973 5733 3.942748 AGGACACAAAAAGCAGTACGAAA 59.057 39.130 0.00 0.00 0.00 3.46
4974 5734 4.033019 GGACACAAAAAGCAGTACGAAAC 58.967 43.478 0.00 0.00 0.00 2.78
4975 5735 4.437659 GGACACAAAAAGCAGTACGAAACA 60.438 41.667 0.00 0.00 0.00 2.83
4976 5736 5.049398 ACACAAAAAGCAGTACGAAACAA 57.951 34.783 0.00 0.00 0.00 2.83
4977 5737 4.854839 ACACAAAAAGCAGTACGAAACAAC 59.145 37.500 0.00 0.00 0.00 3.32
4978 5738 4.264380 CACAAAAAGCAGTACGAAACAACC 59.736 41.667 0.00 0.00 0.00 3.77
4979 5739 4.082679 ACAAAAAGCAGTACGAAACAACCA 60.083 37.500 0.00 0.00 0.00 3.67
4980 5740 4.911514 AAAAGCAGTACGAAACAACCAT 57.088 36.364 0.00 0.00 0.00 3.55
4981 5741 6.183360 ACAAAAAGCAGTACGAAACAACCATA 60.183 34.615 0.00 0.00 0.00 2.74
4982 5742 6.569179 AAAAGCAGTACGAAACAACCATAT 57.431 33.333 0.00 0.00 0.00 1.78
4983 5743 6.569179 AAAGCAGTACGAAACAACCATATT 57.431 33.333 0.00 0.00 0.00 1.28
4984 5744 6.569179 AAGCAGTACGAAACAACCATATTT 57.431 33.333 0.00 0.00 0.00 1.40
4985 5745 6.569179 AGCAGTACGAAACAACCATATTTT 57.431 33.333 0.00 0.00 0.00 1.82
4986 5746 6.977213 AGCAGTACGAAACAACCATATTTTT 58.023 32.000 0.00 0.00 0.00 1.94
5008 5768 8.909708 TTTTTCATGTCCGTCAAAATATCATC 57.090 30.769 0.00 0.00 0.00 2.92
5009 5769 7.864108 TTTCATGTCCGTCAAAATATCATCT 57.136 32.000 0.00 0.00 0.00 2.90
5010 5770 7.482654 TTCATGTCCGTCAAAATATCATCTC 57.517 36.000 0.00 0.00 0.00 2.75
5011 5771 5.691754 TCATGTCCGTCAAAATATCATCTCG 59.308 40.000 0.00 0.00 0.00 4.04
5012 5772 5.257082 TGTCCGTCAAAATATCATCTCGA 57.743 39.130 0.00 0.00 0.00 4.04
5013 5773 5.842907 TGTCCGTCAAAATATCATCTCGAT 58.157 37.500 0.00 0.00 38.21 3.59
5014 5774 6.977213 TGTCCGTCAAAATATCATCTCGATA 58.023 36.000 0.00 0.00 40.90 2.92
5015 5775 7.430441 TGTCCGTCAAAATATCATCTCGATAA 58.570 34.615 0.00 0.00 40.04 1.75
5016 5776 7.923878 TGTCCGTCAAAATATCATCTCGATAAA 59.076 33.333 0.00 0.00 40.04 1.40
5017 5777 8.428536 GTCCGTCAAAATATCATCTCGATAAAG 58.571 37.037 0.00 0.00 40.04 1.85
5018 5778 8.141909 TCCGTCAAAATATCATCTCGATAAAGT 58.858 33.333 0.00 0.00 40.04 2.66
5019 5779 9.406828 CCGTCAAAATATCATCTCGATAAAGTA 57.593 33.333 0.00 0.00 40.04 2.24
5032 5792 8.193250 TCTCGATAAAGTAAACAGTTATTGGC 57.807 34.615 0.00 0.00 0.00 4.52
5033 5793 7.279313 TCTCGATAAAGTAAACAGTTATTGGCC 59.721 37.037 0.00 0.00 0.00 5.36
5034 5794 7.107542 TCGATAAAGTAAACAGTTATTGGCCT 58.892 34.615 3.32 0.00 0.00 5.19
5035 5795 7.279313 TCGATAAAGTAAACAGTTATTGGCCTC 59.721 37.037 3.32 0.00 0.00 4.70
5036 5796 5.622770 AAAGTAAACAGTTATTGGCCTCG 57.377 39.130 3.32 0.00 0.00 4.63
5037 5797 4.546829 AGTAAACAGTTATTGGCCTCGA 57.453 40.909 3.32 0.00 0.00 4.04
5038 5798 5.099042 AGTAAACAGTTATTGGCCTCGAT 57.901 39.130 3.32 0.00 0.00 3.59
5039 5799 5.116882 AGTAAACAGTTATTGGCCTCGATC 58.883 41.667 3.32 0.00 0.00 3.69
5040 5800 3.914426 AACAGTTATTGGCCTCGATCT 57.086 42.857 3.32 0.00 0.00 2.75
5041 5801 3.185246 ACAGTTATTGGCCTCGATCTG 57.815 47.619 3.32 10.03 0.00 2.90
5042 5802 2.766263 ACAGTTATTGGCCTCGATCTGA 59.234 45.455 18.92 0.00 0.00 3.27
5043 5803 3.197766 ACAGTTATTGGCCTCGATCTGAA 59.802 43.478 18.92 0.00 0.00 3.02
5044 5804 4.141620 ACAGTTATTGGCCTCGATCTGAAT 60.142 41.667 18.92 5.60 0.00 2.57
5045 5805 5.070446 ACAGTTATTGGCCTCGATCTGAATA 59.930 40.000 18.92 4.76 0.00 1.75
5046 5806 5.991606 CAGTTATTGGCCTCGATCTGAATAA 59.008 40.000 3.32 0.11 0.00 1.40
5047 5807 5.992217 AGTTATTGGCCTCGATCTGAATAAC 59.008 40.000 17.20 17.20 36.89 1.89
5048 5808 3.904800 TTGGCCTCGATCTGAATAACA 57.095 42.857 3.32 0.00 0.00 2.41
5049 5809 4.422073 TTGGCCTCGATCTGAATAACAT 57.578 40.909 3.32 0.00 0.00 2.71
5050 5810 3.995199 TGGCCTCGATCTGAATAACATC 58.005 45.455 3.32 0.00 0.00 3.06
5051 5811 3.387699 TGGCCTCGATCTGAATAACATCA 59.612 43.478 3.32 0.00 0.00 3.07
5052 5812 4.141733 TGGCCTCGATCTGAATAACATCAA 60.142 41.667 3.32 0.00 0.00 2.57
5053 5813 4.450419 GGCCTCGATCTGAATAACATCAAG 59.550 45.833 0.00 0.00 0.00 3.02
5054 5814 4.084118 GCCTCGATCTGAATAACATCAAGC 60.084 45.833 0.00 0.00 0.00 4.01
5055 5815 5.052481 CCTCGATCTGAATAACATCAAGCA 58.948 41.667 0.00 0.00 0.00 3.91
5056 5816 5.050499 CCTCGATCTGAATAACATCAAGCAC 60.050 44.000 0.00 0.00 0.00 4.40
5057 5817 5.664457 TCGATCTGAATAACATCAAGCACT 58.336 37.500 0.00 0.00 0.00 4.40
5058 5818 6.805713 TCGATCTGAATAACATCAAGCACTA 58.194 36.000 0.00 0.00 0.00 2.74
5059 5819 7.436933 TCGATCTGAATAACATCAAGCACTAT 58.563 34.615 0.00 0.00 0.00 2.12
5060 5820 7.383300 TCGATCTGAATAACATCAAGCACTATG 59.617 37.037 0.00 0.00 0.00 2.23
5061 5821 6.609237 TCTGAATAACATCAAGCACTATGC 57.391 37.500 0.00 0.00 45.46 3.14
5072 5832 1.889545 GCACTATGCAAGATCTCCCC 58.110 55.000 0.00 0.00 44.26 4.81
5073 5833 1.544314 GCACTATGCAAGATCTCCCCC 60.544 57.143 0.00 0.00 44.26 5.40
5074 5834 2.053244 CACTATGCAAGATCTCCCCCT 58.947 52.381 0.00 0.00 0.00 4.79
5075 5835 3.242867 CACTATGCAAGATCTCCCCCTA 58.757 50.000 0.00 0.00 0.00 3.53
5076 5836 3.843027 CACTATGCAAGATCTCCCCCTAT 59.157 47.826 0.00 0.00 0.00 2.57
5077 5837 4.081198 CACTATGCAAGATCTCCCCCTATC 60.081 50.000 0.00 0.00 0.00 2.08
5078 5838 2.494888 TGCAAGATCTCCCCCTATCA 57.505 50.000 0.00 0.00 0.00 2.15
5079 5839 2.995746 TGCAAGATCTCCCCCTATCAT 58.004 47.619 0.00 0.00 0.00 2.45
5080 5840 4.146245 TGCAAGATCTCCCCCTATCATA 57.854 45.455 0.00 0.00 0.00 2.15
5081 5841 4.502415 TGCAAGATCTCCCCCTATCATAA 58.498 43.478 0.00 0.00 0.00 1.90
5082 5842 4.287067 TGCAAGATCTCCCCCTATCATAAC 59.713 45.833 0.00 0.00 0.00 1.89
5083 5843 4.323868 GCAAGATCTCCCCCTATCATAACC 60.324 50.000 0.00 0.00 0.00 2.85
5084 5844 3.714144 AGATCTCCCCCTATCATAACCG 58.286 50.000 0.00 0.00 0.00 4.44
5085 5845 3.336997 AGATCTCCCCCTATCATAACCGA 59.663 47.826 0.00 0.00 0.00 4.69
5086 5846 3.170991 TCTCCCCCTATCATAACCGAG 57.829 52.381 0.00 0.00 0.00 4.63
5087 5847 2.449730 TCTCCCCCTATCATAACCGAGT 59.550 50.000 0.00 0.00 0.00 4.18
5088 5848 3.116862 TCTCCCCCTATCATAACCGAGTT 60.117 47.826 0.00 0.00 0.00 3.01
5089 5849 3.236896 TCCCCCTATCATAACCGAGTTC 58.763 50.000 0.00 0.00 0.00 3.01
5090 5850 2.302157 CCCCCTATCATAACCGAGTTCC 59.698 54.545 0.00 0.00 0.00 3.62
5091 5851 3.240302 CCCCTATCATAACCGAGTTCCT 58.760 50.000 0.00 0.00 0.00 3.36
5092 5852 4.413760 CCCCTATCATAACCGAGTTCCTA 58.586 47.826 0.00 0.00 0.00 2.94
5093 5853 4.836736 CCCCTATCATAACCGAGTTCCTAA 59.163 45.833 0.00 0.00 0.00 2.69
5094 5854 5.279356 CCCCTATCATAACCGAGTTCCTAAC 60.279 48.000 0.00 0.00 0.00 2.34
5095 5855 5.303589 CCCTATCATAACCGAGTTCCTAACA 59.696 44.000 0.00 0.00 0.00 2.41
5096 5856 6.183360 CCCTATCATAACCGAGTTCCTAACAA 60.183 42.308 0.00 0.00 0.00 2.83
5097 5857 6.924060 CCTATCATAACCGAGTTCCTAACAAG 59.076 42.308 0.00 0.00 0.00 3.16
5098 5858 5.733620 TCATAACCGAGTTCCTAACAAGT 57.266 39.130 0.00 0.00 0.00 3.16
5099 5859 6.839124 TCATAACCGAGTTCCTAACAAGTA 57.161 37.500 0.00 0.00 0.00 2.24
5100 5860 6.624423 TCATAACCGAGTTCCTAACAAGTAC 58.376 40.000 0.00 0.00 0.00 2.73
5101 5861 6.435277 TCATAACCGAGTTCCTAACAAGTACT 59.565 38.462 0.00 0.00 0.00 2.73
5102 5862 4.780275 ACCGAGTTCCTAACAAGTACTC 57.220 45.455 0.00 0.00 33.58 2.59
5103 5863 3.509184 ACCGAGTTCCTAACAAGTACTCC 59.491 47.826 0.00 0.00 33.39 3.85
5104 5864 3.119209 CCGAGTTCCTAACAAGTACTCCC 60.119 52.174 0.00 0.00 33.39 4.30
5105 5865 3.762823 CGAGTTCCTAACAAGTACTCCCT 59.237 47.826 0.00 0.00 33.39 4.20
5106 5866 4.142425 CGAGTTCCTAACAAGTACTCCCTC 60.142 50.000 0.00 0.00 33.39 4.30
5107 5867 4.095211 AGTTCCTAACAAGTACTCCCTCC 58.905 47.826 0.00 0.00 0.00 4.30
5108 5868 2.731572 TCCTAACAAGTACTCCCTCCG 58.268 52.381 0.00 0.00 0.00 4.63
5109 5869 2.042162 TCCTAACAAGTACTCCCTCCGT 59.958 50.000 0.00 0.00 0.00 4.69
5110 5870 2.830321 CCTAACAAGTACTCCCTCCGTT 59.170 50.000 0.00 0.00 0.00 4.44
5111 5871 3.119209 CCTAACAAGTACTCCCTCCGTTC 60.119 52.174 0.00 0.00 0.00 3.95
5112 5872 2.305858 ACAAGTACTCCCTCCGTTCT 57.694 50.000 0.00 0.00 0.00 3.01
5113 5873 1.893801 ACAAGTACTCCCTCCGTTCTG 59.106 52.381 0.00 0.00 0.00 3.02
5114 5874 2.168496 CAAGTACTCCCTCCGTTCTGA 58.832 52.381 0.00 0.00 0.00 3.27
5115 5875 2.761208 CAAGTACTCCCTCCGTTCTGAT 59.239 50.000 0.00 0.00 0.00 2.90
5116 5876 3.103080 AGTACTCCCTCCGTTCTGATT 57.897 47.619 0.00 0.00 0.00 2.57
5117 5877 3.442076 AGTACTCCCTCCGTTCTGATTT 58.558 45.455 0.00 0.00 0.00 2.17
5118 5878 4.607239 AGTACTCCCTCCGTTCTGATTTA 58.393 43.478 0.00 0.00 0.00 1.40
5119 5879 3.889520 ACTCCCTCCGTTCTGATTTAC 57.110 47.619 0.00 0.00 0.00 2.01
5120 5880 3.442076 ACTCCCTCCGTTCTGATTTACT 58.558 45.455 0.00 0.00 0.00 2.24
5121 5881 3.447944 ACTCCCTCCGTTCTGATTTACTC 59.552 47.826 0.00 0.00 0.00 2.59
5122 5882 2.426024 TCCCTCCGTTCTGATTTACTCG 59.574 50.000 0.00 0.00 0.00 4.18
5123 5883 2.165845 CCCTCCGTTCTGATTTACTCGT 59.834 50.000 0.00 0.00 0.00 4.18
5124 5884 3.436496 CCTCCGTTCTGATTTACTCGTC 58.564 50.000 0.00 0.00 0.00 4.20
5125 5885 3.099362 CTCCGTTCTGATTTACTCGTCG 58.901 50.000 0.00 0.00 0.00 5.12
5126 5886 2.485426 TCCGTTCTGATTTACTCGTCGT 59.515 45.455 0.00 0.00 0.00 4.34
5127 5887 2.592897 CCGTTCTGATTTACTCGTCGTG 59.407 50.000 0.00 0.00 0.00 4.35
5128 5888 2.592897 CGTTCTGATTTACTCGTCGTGG 59.407 50.000 0.00 0.00 0.00 4.94
5129 5889 3.572584 GTTCTGATTTACTCGTCGTGGT 58.427 45.455 0.00 0.00 0.00 4.16
5130 5890 3.928727 TCTGATTTACTCGTCGTGGTT 57.071 42.857 0.00 0.00 0.00 3.67
5131 5891 4.247267 TCTGATTTACTCGTCGTGGTTT 57.753 40.909 0.00 0.00 0.00 3.27
5132 5892 4.624015 TCTGATTTACTCGTCGTGGTTTT 58.376 39.130 0.00 0.00 0.00 2.43
5133 5893 5.771469 TCTGATTTACTCGTCGTGGTTTTA 58.229 37.500 0.00 0.00 0.00 1.52
5134 5894 5.860182 TCTGATTTACTCGTCGTGGTTTTAG 59.140 40.000 0.00 0.00 0.00 1.85
5135 5895 5.531634 TGATTTACTCGTCGTGGTTTTAGT 58.468 37.500 0.00 0.00 0.00 2.24
5136 5896 5.984926 TGATTTACTCGTCGTGGTTTTAGTT 59.015 36.000 0.00 0.00 0.00 2.24
5137 5897 5.888412 TTTACTCGTCGTGGTTTTAGTTC 57.112 39.130 0.00 0.00 0.00 3.01
5138 5898 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
5139 5899 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
5140 5900 3.800506 ACTCGTCGTGGTTTTAGTTCAAG 59.199 43.478 0.00 0.00 0.00 3.02
5141 5901 4.044336 TCGTCGTGGTTTTAGTTCAAGA 57.956 40.909 0.00 0.00 0.00 3.02
5142 5902 3.798337 TCGTCGTGGTTTTAGTTCAAGAC 59.202 43.478 0.00 0.00 36.85 3.01
5143 5903 4.111489 GTCGTGGTTTTAGTTCAAGACG 57.889 45.455 0.00 0.00 32.38 4.18
5144 5904 3.798337 GTCGTGGTTTTAGTTCAAGACGA 59.202 43.478 0.00 0.00 32.38 4.20
5145 5905 4.046462 TCGTGGTTTTAGTTCAAGACGAG 58.954 43.478 0.00 0.00 31.48 4.18
5146 5906 3.800506 CGTGGTTTTAGTTCAAGACGAGT 59.199 43.478 0.00 0.00 0.00 4.18
5147 5907 4.977963 CGTGGTTTTAGTTCAAGACGAGTA 59.022 41.667 0.00 0.00 0.00 2.59
5148 5908 5.459762 CGTGGTTTTAGTTCAAGACGAGTAA 59.540 40.000 0.00 0.00 0.00 2.24
5149 5909 6.019640 CGTGGTTTTAGTTCAAGACGAGTAAA 60.020 38.462 0.00 0.00 0.00 2.01
5150 5910 7.306983 CGTGGTTTTAGTTCAAGACGAGTAAAT 60.307 37.037 0.00 0.00 0.00 1.40
5151 5911 8.008279 GTGGTTTTAGTTCAAGACGAGTAAATC 58.992 37.037 0.00 0.00 0.00 2.17
5152 5912 7.711772 TGGTTTTAGTTCAAGACGAGTAAATCA 59.288 33.333 0.00 0.00 0.00 2.57
5153 5913 8.221766 GGTTTTAGTTCAAGACGAGTAAATCAG 58.778 37.037 0.00 0.00 0.00 2.90
5154 5914 8.975439 GTTTTAGTTCAAGACGAGTAAATCAGA 58.025 33.333 0.00 0.00 0.00 3.27
5155 5915 9.537192 TTTTAGTTCAAGACGAGTAAATCAGAA 57.463 29.630 0.00 0.00 0.00 3.02
5156 5916 9.706691 TTTAGTTCAAGACGAGTAAATCAGAAT 57.293 29.630 0.00 0.00 0.00 2.40
5157 5917 7.588143 AGTTCAAGACGAGTAAATCAGAATG 57.412 36.000 0.00 0.00 37.54 2.67
5158 5918 6.591834 AGTTCAAGACGAGTAAATCAGAATGG 59.408 38.462 0.00 0.00 36.16 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.319689 CCGGTCTTCCTCTTAGAGATTCC 59.680 52.174 11.32 5.11 0.00 3.01
1 2 4.208746 TCCGGTCTTCCTCTTAGAGATTC 58.791 47.826 11.32 0.00 0.00 2.52
3 4 3.955524 TCCGGTCTTCCTCTTAGAGAT 57.044 47.619 11.32 0.00 0.00 2.75
4 5 3.354467 GTTCCGGTCTTCCTCTTAGAGA 58.646 50.000 11.32 0.00 0.00 3.10
5 6 2.427812 GGTTCCGGTCTTCCTCTTAGAG 59.572 54.545 0.00 1.56 0.00 2.43
6 7 2.454538 GGTTCCGGTCTTCCTCTTAGA 58.545 52.381 0.00 0.00 0.00 2.10
7 8 1.481363 GGGTTCCGGTCTTCCTCTTAG 59.519 57.143 0.00 0.00 0.00 2.18
8 9 1.565067 GGGTTCCGGTCTTCCTCTTA 58.435 55.000 0.00 0.00 0.00 2.10
9 10 1.542187 CGGGTTCCGGTCTTCCTCTT 61.542 60.000 0.00 0.00 44.15 2.85
25 26 2.494918 GATCTGGACACCGACGGG 59.505 66.667 20.00 9.81 40.11 5.28
27 28 1.062685 CTCGATCTGGACACCGACG 59.937 63.158 0.00 0.00 0.00 5.12
36 37 3.610669 CCGGCCTCCTCGATCTGG 61.611 72.222 0.00 0.00 0.00 3.86
46 47 0.749454 ATCTGTTTCATGCCGGCCTC 60.749 55.000 26.77 8.26 0.00 4.70
63 64 1.135083 TCCGAGCTCCAAACTTCGATC 60.135 52.381 8.47 0.00 0.00 3.69
67 68 2.070028 GTTCTCCGAGCTCCAAACTTC 58.930 52.381 8.47 0.00 0.00 3.01
82 84 2.866028 CTTGGCGCTGCTGTTCTC 59.134 61.111 7.64 0.00 0.00 2.87
103 105 4.804420 ATCCAGAGGAGGCCCGCA 62.804 66.667 0.00 0.00 34.05 5.69
104 106 3.934962 GATCCAGAGGAGGCCCGC 61.935 72.222 0.00 0.00 34.05 6.13
109 111 1.075970 TGTCGGGATCCAGAGGAGG 60.076 63.158 15.51 0.00 34.05 4.30
123 125 4.227134 CCCAGATCCGGCCTGTCG 62.227 72.222 18.26 7.80 0.00 4.35
126 128 4.559063 CTGCCCAGATCCGGCCTG 62.559 72.222 16.72 14.43 46.48 4.85
140 142 3.050275 GAACGGGTGAGGCACTGC 61.050 66.667 0.00 0.00 41.55 4.40
183 185 4.988716 TGGAGGTCCGGTCGCAGT 62.989 66.667 0.00 0.00 39.43 4.40
191 193 1.109920 ATCCTGATCGTGGAGGTCCG 61.110 60.000 11.98 0.00 39.43 4.79
193 195 1.403814 TCATCCTGATCGTGGAGGTC 58.596 55.000 15.56 0.00 36.81 3.85
194 196 1.759445 CTTCATCCTGATCGTGGAGGT 59.241 52.381 15.56 0.00 36.81 3.85
200 202 4.956700 TCTTAGGTTCTTCATCCTGATCGT 59.043 41.667 0.00 0.00 35.51 3.73
204 206 3.447586 CGGTCTTAGGTTCTTCATCCTGA 59.552 47.826 0.00 0.00 35.51 3.86
207 209 2.742204 GCCGGTCTTAGGTTCTTCATCC 60.742 54.545 1.90 0.00 0.00 3.51
210 212 1.275291 CAGCCGGTCTTAGGTTCTTCA 59.725 52.381 1.90 0.00 0.00 3.02
219 221 1.899437 CTTGGAGGCAGCCGGTCTTA 61.899 60.000 5.55 0.00 0.00 2.10
307 313 1.222936 GGGCTCCTCTCCATGTGTG 59.777 63.158 0.00 0.00 0.00 3.82
315 321 3.844090 GACGCAGGGGCTCCTCTC 61.844 72.222 0.00 0.00 42.67 3.20
327 333 3.578272 GTTGGTGTTGCCGACGCA 61.578 61.111 0.00 0.00 45.49 5.24
334 347 0.530431 CAAAGCCTGGTTGGTGTTGC 60.530 55.000 0.00 0.00 38.35 4.17
343 356 2.357517 CGTCGAGCAAAGCCTGGT 60.358 61.111 0.00 0.00 38.89 4.00
422 435 3.534970 CTGCGAGCGATCGAGGGAG 62.535 68.421 29.29 12.05 34.64 4.30
423 436 3.586961 CTGCGAGCGATCGAGGGA 61.587 66.667 29.29 5.80 34.64 4.20
439 452 1.587933 GAACTCCTCACGTCGCTCCT 61.588 60.000 0.00 0.00 0.00 3.69
454 467 2.484889 GTTTCGCTTCACTCCTGAACT 58.515 47.619 0.00 0.00 32.68 3.01
503 516 4.339814 AGGCGACTTTTACCATTTGTTTGA 59.660 37.500 0.00 0.00 37.44 2.69
524 537 9.971922 ATAAAAGAGAAATGAGTTTTGACAAGG 57.028 29.630 0.00 0.00 0.00 3.61
546 559 5.805486 GTCTGAACACGCTCTGACATATAAA 59.195 40.000 12.12 0.00 41.46 1.40
556 569 2.802816 GTTTGATGTCTGAACACGCTCT 59.197 45.455 0.00 0.00 38.48 4.09
607 621 3.308976 GGGAAGCCCGGACTATCTAGATA 60.309 52.174 11.94 11.94 32.13 1.98
608 622 2.557901 GGGAAGCCCGGACTATCTAGAT 60.558 54.545 10.73 10.73 32.13 1.98
651 665 6.608808 CCCCTTCTGGACAATCATATTTCTTT 59.391 38.462 0.00 0.00 35.39 2.52
659 673 1.285962 CACCCCCTTCTGGACAATCAT 59.714 52.381 0.00 0.00 35.39 2.45
662 676 1.686236 ATCACCCCCTTCTGGACAAT 58.314 50.000 0.00 0.00 35.39 2.71
669 683 2.024273 TCGTCTCTAATCACCCCCTTCT 60.024 50.000 0.00 0.00 0.00 2.85
676 691 2.961526 TTGCCTCGTCTCTAATCACC 57.038 50.000 0.00 0.00 0.00 4.02
677 692 5.803020 ATTTTTGCCTCGTCTCTAATCAC 57.197 39.130 0.00 0.00 0.00 3.06
708 723 0.895530 TCACCTCTTGCTACCCTTCG 59.104 55.000 0.00 0.00 0.00 3.79
709 724 1.208293 CCTCACCTCTTGCTACCCTTC 59.792 57.143 0.00 0.00 0.00 3.46
718 734 5.335127 CATTTATTTTCGCCTCACCTCTTG 58.665 41.667 0.00 0.00 0.00 3.02
741 757 4.142859 TGGTATGCACGTTTATTTTCGTCC 60.143 41.667 0.00 0.00 38.23 4.79
794 811 1.804326 CGAAAGGTGGTAGGTCGCG 60.804 63.158 0.00 0.00 0.00 5.87
876 895 1.972872 CAGACAGAAGGCAAGTGGTT 58.027 50.000 0.00 0.00 0.00 3.67
908 927 1.184431 TGTGCAGGCCATGGTAATTG 58.816 50.000 14.67 7.96 0.00 2.32
927 946 2.424956 GGCGGAGATCAAGAAATGCTTT 59.575 45.455 0.00 0.00 33.60 3.51
1202 1271 4.383602 CGCCAACCAAACGAGCGG 62.384 66.667 0.00 0.00 42.93 5.52
1543 1620 3.951037 TGCTTAAGGTCAGAGCAAACAAA 59.049 39.130 4.29 0.00 42.89 2.83
1544 1621 3.550820 TGCTTAAGGTCAGAGCAAACAA 58.449 40.909 4.29 0.00 42.89 2.83
1545 1622 3.207265 TGCTTAAGGTCAGAGCAAACA 57.793 42.857 4.29 0.00 42.89 2.83
1660 1745 2.417787 GCAGCCTGGCTTAAAAGAATGG 60.418 50.000 20.79 4.62 36.40 3.16
1695 1780 9.121658 TGTGTATGATGTTAACTTGGTTGTTAA 57.878 29.630 7.22 0.00 39.28 2.01
1786 1886 5.669477 TGCTTGCTAATTTTGGTTTCTGTT 58.331 33.333 0.00 0.00 0.00 3.16
1895 1996 7.442364 TGTTTCAAGTGTCCAATTGTTCAAAAA 59.558 29.630 4.43 0.00 37.61 1.94
1896 1997 6.931281 TGTTTCAAGTGTCCAATTGTTCAAAA 59.069 30.769 4.43 0.00 37.61 2.44
1897 1998 6.459066 TGTTTCAAGTGTCCAATTGTTCAAA 58.541 32.000 4.43 0.00 37.61 2.69
1898 1999 6.030548 TGTTTCAAGTGTCCAATTGTTCAA 57.969 33.333 4.43 0.00 37.61 2.69
1899 2000 5.651387 TGTTTCAAGTGTCCAATTGTTCA 57.349 34.783 4.43 0.28 37.61 3.18
1900 2001 5.691754 GGATGTTTCAAGTGTCCAATTGTTC 59.308 40.000 4.43 0.00 37.61 3.18
1901 2002 5.128499 TGGATGTTTCAAGTGTCCAATTGTT 59.872 36.000 4.43 0.00 37.61 2.83
1902 2003 4.648762 TGGATGTTTCAAGTGTCCAATTGT 59.351 37.500 4.43 0.00 37.61 2.71
1903 2004 5.199024 TGGATGTTTCAAGTGTCCAATTG 57.801 39.130 0.00 0.00 36.12 2.32
1904 2005 6.268387 AGAATGGATGTTTCAAGTGTCCAATT 59.732 34.615 0.00 0.00 41.83 2.32
1905 2006 5.776716 AGAATGGATGTTTCAAGTGTCCAAT 59.223 36.000 0.00 0.00 41.83 3.16
1906 2007 5.009911 CAGAATGGATGTTTCAAGTGTCCAA 59.990 40.000 0.00 0.00 41.83 3.53
1907 2008 4.520111 CAGAATGGATGTTTCAAGTGTCCA 59.480 41.667 0.00 0.00 42.62 4.02
1926 2027 9.498176 CTGTTATAATCACATCATCCATCAGAA 57.502 33.333 0.00 0.00 0.00 3.02
1949 2050 4.099419 GTCAAGGGTGTTGGAATTTTCTGT 59.901 41.667 0.00 0.00 0.00 3.41
2105 2293 5.593968 TCATGGATATCAACAATTTGCTGC 58.406 37.500 4.83 0.00 32.17 5.25
2159 2356 1.692519 ACGATATGACAGTAAGGGGGC 59.307 52.381 0.00 0.00 0.00 5.80
2180 2377 2.559698 TCGAACATCACCAACCATGT 57.440 45.000 0.00 0.00 34.58 3.21
2206 2403 5.989168 GGTGGGAAAATTTAACCTTGAGTTG 59.011 40.000 11.15 0.00 39.67 3.16
2207 2404 5.663556 TGGTGGGAAAATTTAACCTTGAGTT 59.336 36.000 11.15 0.00 42.83 3.01
2229 2426 3.504906 AGAAATGATGACTGCAACAGTGG 59.495 43.478 4.71 0.00 45.44 4.00
2384 2587 0.883153 CAGCAAGCAACATAGTGGCA 59.117 50.000 0.00 0.00 34.42 4.92
2444 2647 5.606348 TTGGTAAAAAGGTGCTCATTGTT 57.394 34.783 0.00 0.00 0.00 2.83
2489 2850 7.994911 TCAAGTGTCCATGCTGAATAGATTTAT 59.005 33.333 0.00 0.00 0.00 1.40
2495 2856 4.511527 ACTCAAGTGTCCATGCTGAATAG 58.488 43.478 0.00 0.00 0.00 1.73
2553 2914 2.298729 ACTGCTTCTGTCTGTTCCTCTC 59.701 50.000 0.00 0.00 0.00 3.20
2817 3204 1.597742 GAGCCTGAACTGAAGTTGCA 58.402 50.000 0.00 0.00 38.56 4.08
2876 3291 2.126734 GCAGTGGCACGTTCATGC 60.127 61.111 12.71 12.41 45.34 4.06
3037 3452 6.338146 TCAATAGGGTCACTTTCTACATTCG 58.662 40.000 0.00 0.00 0.00 3.34
3062 3477 6.644248 TCAGATTTGCTTATAGTACGGCTA 57.356 37.500 0.00 0.00 0.00 3.93
3325 3743 5.603596 TGACATACCGTTTTGAAGTACACT 58.396 37.500 0.00 0.00 0.00 3.55
3370 3788 4.019174 AGATTTGTAAGGCAGACCCATTG 58.981 43.478 0.00 0.00 36.11 2.82
3389 3807 6.314896 GTCAGAAACAACAGCTTATAGCAGAT 59.685 38.462 1.09 0.00 45.56 2.90
3482 3901 5.089434 ACATATCCTGATAGAGCCATCACA 58.911 41.667 0.00 0.00 31.67 3.58
3485 3904 4.874966 GCAACATATCCTGATAGAGCCATC 59.125 45.833 0.00 0.00 0.00 3.51
3602 4029 7.147689 TGGGCAAATCTTAAACATAGCAATGAT 60.148 33.333 0.00 0.00 36.54 2.45
3641 4068 0.578683 CGGTCATGATAACTGCTGCG 59.421 55.000 0.00 0.00 0.00 5.18
3669 4096 3.209410 CTTGACTGCAGGAACTCAAACT 58.791 45.455 19.93 0.00 34.60 2.66
3724 4151 6.810676 CAGGATATGATACGAGGAAACATGAG 59.189 42.308 0.00 0.00 0.00 2.90
3834 4265 0.623723 TTAGGGGCAATGTCCTGACC 59.376 55.000 3.05 0.00 44.74 4.02
4014 4447 3.639094 CTCCTACTGTGCTAACTATGGCT 59.361 47.826 0.00 0.00 33.52 4.75
4089 4522 1.725641 CACTGAAATAGAGCACCGCA 58.274 50.000 0.00 0.00 0.00 5.69
4107 4540 0.753867 TGTTGTAGAAGACGGTGGCA 59.246 50.000 0.00 0.00 0.00 4.92
4194 4636 4.388773 CGCAGACAGACATTTTACAAGCTA 59.611 41.667 0.00 0.00 0.00 3.32
4250 4693 4.931661 ATGAGCCAACCAATCAATCATC 57.068 40.909 0.00 0.00 0.00 2.92
4252 4695 4.087907 TGAATGAGCCAACCAATCAATCA 58.912 39.130 0.00 0.00 32.03 2.57
4297 4740 2.799126 TTCCACGGATACAAAGCCAT 57.201 45.000 0.00 0.00 0.00 4.40
4499 5258 4.787551 TGTAAACGGAATGAATATGCCCT 58.212 39.130 0.00 0.00 0.00 5.19
4686 5445 5.126707 TCCTAATAGACCGTTTTCTGTCTCC 59.873 44.000 0.00 0.00 42.00 3.71
4687 5446 6.205101 TCCTAATAGACCGTTTTCTGTCTC 57.795 41.667 0.00 0.00 42.00 3.36
4712 5472 3.551846 ACACCAAGTTTCTTGTACCCAG 58.448 45.455 8.37 0.00 0.00 4.45
4729 5489 5.132897 TCATGTGAATTTAGGCAAACACC 57.867 39.130 0.00 0.00 0.00 4.16
4751 5511 9.685276 TCCTCTGAAACAATATGATAACACAAT 57.315 29.630 0.00 0.00 0.00 2.71
4752 5512 9.685276 ATCCTCTGAAACAATATGATAACACAA 57.315 29.630 0.00 0.00 0.00 3.33
4753 5513 9.112725 CATCCTCTGAAACAATATGATAACACA 57.887 33.333 0.00 0.00 0.00 3.72
4754 5514 8.562892 CCATCCTCTGAAACAATATGATAACAC 58.437 37.037 0.00 0.00 0.00 3.32
4755 5515 8.274322 ACCATCCTCTGAAACAATATGATAACA 58.726 33.333 0.00 0.00 0.00 2.41
4756 5516 8.682936 ACCATCCTCTGAAACAATATGATAAC 57.317 34.615 0.00 0.00 0.00 1.89
4759 5519 8.105829 GGATACCATCCTCTGAAACAATATGAT 58.894 37.037 0.00 0.00 46.19 2.45
4760 5520 7.453393 GGATACCATCCTCTGAAACAATATGA 58.547 38.462 0.00 0.00 46.19 2.15
4761 5521 7.678947 GGATACCATCCTCTGAAACAATATG 57.321 40.000 0.00 0.00 46.19 1.78
4776 5536 4.398988 TGCAACAAATGACTGGATACCATC 59.601 41.667 0.00 0.00 30.82 3.51
4777 5537 4.343231 TGCAACAAATGACTGGATACCAT 58.657 39.130 0.00 0.00 30.82 3.55
4778 5538 3.758023 CTGCAACAAATGACTGGATACCA 59.242 43.478 0.00 0.00 0.00 3.25
4779 5539 3.129287 CCTGCAACAAATGACTGGATACC 59.871 47.826 0.00 0.00 0.00 2.73
4780 5540 3.129287 CCCTGCAACAAATGACTGGATAC 59.871 47.826 0.00 0.00 0.00 2.24
4781 5541 3.245229 ACCCTGCAACAAATGACTGGATA 60.245 43.478 0.00 0.00 0.00 2.59
4782 5542 2.173519 CCCTGCAACAAATGACTGGAT 58.826 47.619 0.00 0.00 0.00 3.41
4783 5543 1.133513 ACCCTGCAACAAATGACTGGA 60.134 47.619 0.00 0.00 0.00 3.86
4784 5544 1.331214 ACCCTGCAACAAATGACTGG 58.669 50.000 0.00 0.00 0.00 4.00
4785 5545 2.746269 CAACCCTGCAACAAATGACTG 58.254 47.619 0.00 0.00 0.00 3.51
4805 5565 4.287081 ACAATGTTGTTTGCTGCAGAAGC 61.287 43.478 20.43 11.38 45.46 3.86
4806 5566 3.450578 ACAATGTTGTTTGCTGCAGAAG 58.549 40.909 20.43 0.00 38.47 2.85
4807 5567 3.523606 ACAATGTTGTTTGCTGCAGAA 57.476 38.095 20.43 2.96 38.47 3.02
4818 5578 4.826733 TGCTTACTCATCCAACAATGTTGT 59.173 37.500 22.66 7.51 44.72 3.32
4819 5579 5.375417 TGCTTACTCATCCAACAATGTTG 57.625 39.130 18.45 18.45 0.00 3.33
4820 5580 6.392354 CATTGCTTACTCATCCAACAATGTT 58.608 36.000 0.00 0.00 38.56 2.71
4821 5581 5.105635 CCATTGCTTACTCATCCAACAATGT 60.106 40.000 10.76 0.00 40.62 2.71
4822 5582 5.105635 ACCATTGCTTACTCATCCAACAATG 60.106 40.000 0.00 0.00 41.44 2.82
4823 5583 5.018809 ACCATTGCTTACTCATCCAACAAT 58.981 37.500 0.00 0.00 0.00 2.71
4824 5584 4.406456 ACCATTGCTTACTCATCCAACAA 58.594 39.130 0.00 0.00 0.00 2.83
4825 5585 4.032960 ACCATTGCTTACTCATCCAACA 57.967 40.909 0.00 0.00 0.00 3.33
4826 5586 4.218417 ACAACCATTGCTTACTCATCCAAC 59.782 41.667 0.00 0.00 0.00 3.77
4827 5587 4.406456 ACAACCATTGCTTACTCATCCAA 58.594 39.130 0.00 0.00 0.00 3.53
4828 5588 4.009675 GACAACCATTGCTTACTCATCCA 58.990 43.478 0.00 0.00 0.00 3.41
4829 5589 4.009675 TGACAACCATTGCTTACTCATCC 58.990 43.478 0.00 0.00 0.00 3.51
4830 5590 4.436050 CGTGACAACCATTGCTTACTCATC 60.436 45.833 0.00 0.00 0.00 2.92
4831 5591 3.436704 CGTGACAACCATTGCTTACTCAT 59.563 43.478 0.00 0.00 0.00 2.90
4832 5592 2.805671 CGTGACAACCATTGCTTACTCA 59.194 45.455 0.00 0.00 0.00 3.41
4833 5593 2.806244 ACGTGACAACCATTGCTTACTC 59.194 45.455 0.00 0.00 0.00 2.59
4834 5594 2.846193 ACGTGACAACCATTGCTTACT 58.154 42.857 0.00 0.00 0.00 2.24
4835 5595 3.002862 TCAACGTGACAACCATTGCTTAC 59.997 43.478 0.00 0.00 0.00 2.34
4836 5596 3.206964 TCAACGTGACAACCATTGCTTA 58.793 40.909 0.00 0.00 0.00 3.09
4837 5597 2.020720 TCAACGTGACAACCATTGCTT 58.979 42.857 0.00 0.00 0.00 3.91
4838 5598 1.674359 TCAACGTGACAACCATTGCT 58.326 45.000 0.00 0.00 0.00 3.91
4839 5599 2.384382 CTTCAACGTGACAACCATTGC 58.616 47.619 0.00 0.00 0.00 3.56
4840 5600 2.616376 TCCTTCAACGTGACAACCATTG 59.384 45.455 0.00 0.00 0.00 2.82
4841 5601 2.925724 TCCTTCAACGTGACAACCATT 58.074 42.857 0.00 0.00 0.00 3.16
4842 5602 2.616842 GTTCCTTCAACGTGACAACCAT 59.383 45.455 0.00 0.00 0.00 3.55
4843 5603 2.011222 GTTCCTTCAACGTGACAACCA 58.989 47.619 0.00 0.00 0.00 3.67
4844 5604 2.031683 CAGTTCCTTCAACGTGACAACC 59.968 50.000 0.00 0.00 40.32 3.77
4845 5605 2.933906 TCAGTTCCTTCAACGTGACAAC 59.066 45.455 0.00 0.00 40.32 3.32
4846 5606 3.254470 TCAGTTCCTTCAACGTGACAA 57.746 42.857 0.00 0.00 40.32 3.18
4847 5607 2.971660 TCAGTTCCTTCAACGTGACA 57.028 45.000 0.00 0.00 40.32 3.58
4848 5608 3.131396 ACATCAGTTCCTTCAACGTGAC 58.869 45.455 0.00 0.00 40.32 3.67
4849 5609 3.469008 ACATCAGTTCCTTCAACGTGA 57.531 42.857 0.00 0.00 40.32 4.35
4850 5610 3.303990 CCAACATCAGTTCCTTCAACGTG 60.304 47.826 0.00 0.00 40.32 4.49
4851 5611 2.878406 CCAACATCAGTTCCTTCAACGT 59.122 45.455 0.00 0.00 40.32 3.99
4852 5612 2.878406 ACCAACATCAGTTCCTTCAACG 59.122 45.455 0.00 0.00 40.32 4.10
4853 5613 3.550842 GCACCAACATCAGTTCCTTCAAC 60.551 47.826 0.00 0.00 35.28 3.18
4854 5614 2.622942 GCACCAACATCAGTTCCTTCAA 59.377 45.455 0.00 0.00 35.28 2.69
4855 5615 2.158623 AGCACCAACATCAGTTCCTTCA 60.159 45.455 0.00 0.00 35.28 3.02
4856 5616 2.227388 CAGCACCAACATCAGTTCCTTC 59.773 50.000 0.00 0.00 35.28 3.46
4857 5617 2.233271 CAGCACCAACATCAGTTCCTT 58.767 47.619 0.00 0.00 35.28 3.36
4858 5618 1.546323 CCAGCACCAACATCAGTTCCT 60.546 52.381 0.00 0.00 35.28 3.36
4859 5619 0.883833 CCAGCACCAACATCAGTTCC 59.116 55.000 0.00 0.00 35.28 3.62
4860 5620 1.537202 GTCCAGCACCAACATCAGTTC 59.463 52.381 0.00 0.00 35.28 3.01
4861 5621 1.609208 GTCCAGCACCAACATCAGTT 58.391 50.000 0.00 0.00 38.88 3.16
4862 5622 0.250901 GGTCCAGCACCAACATCAGT 60.251 55.000 0.00 0.00 45.98 3.41
4863 5623 2.559785 GGTCCAGCACCAACATCAG 58.440 57.895 0.00 0.00 45.98 2.90
4864 5624 4.819783 GGTCCAGCACCAACATCA 57.180 55.556 0.00 0.00 45.98 3.07
4872 5632 3.740115 TCAAAGTAGAAAGGTCCAGCAC 58.260 45.455 0.00 0.00 0.00 4.40
4873 5633 4.640771 ATCAAAGTAGAAAGGTCCAGCA 57.359 40.909 0.00 0.00 0.00 4.41
4874 5634 6.261158 GGATAATCAAAGTAGAAAGGTCCAGC 59.739 42.308 0.00 0.00 0.00 4.85
4875 5635 6.768381 GGGATAATCAAAGTAGAAAGGTCCAG 59.232 42.308 0.00 0.00 0.00 3.86
4876 5636 6.216662 TGGGATAATCAAAGTAGAAAGGTCCA 59.783 38.462 0.00 0.00 0.00 4.02
4877 5637 6.659824 TGGGATAATCAAAGTAGAAAGGTCC 58.340 40.000 0.00 0.00 0.00 4.46
4878 5638 7.255277 GCATGGGATAATCAAAGTAGAAAGGTC 60.255 40.741 0.00 0.00 0.00 3.85
4879 5639 6.547510 GCATGGGATAATCAAAGTAGAAAGGT 59.452 38.462 0.00 0.00 0.00 3.50
4880 5640 6.015940 GGCATGGGATAATCAAAGTAGAAAGG 60.016 42.308 0.00 0.00 0.00 3.11
4881 5641 6.293626 CGGCATGGGATAATCAAAGTAGAAAG 60.294 42.308 0.00 0.00 0.00 2.62
4882 5642 5.530915 CGGCATGGGATAATCAAAGTAGAAA 59.469 40.000 0.00 0.00 0.00 2.52
4883 5643 5.063204 CGGCATGGGATAATCAAAGTAGAA 58.937 41.667 0.00 0.00 0.00 2.10
4884 5644 4.504864 CCGGCATGGGATAATCAAAGTAGA 60.505 45.833 0.00 0.00 0.00 2.59
4885 5645 3.753272 CCGGCATGGGATAATCAAAGTAG 59.247 47.826 0.00 0.00 0.00 2.57
4886 5646 3.137544 ACCGGCATGGGATAATCAAAGTA 59.862 43.478 0.00 0.00 44.64 2.24
4887 5647 2.091885 ACCGGCATGGGATAATCAAAGT 60.092 45.455 0.00 0.00 44.64 2.66
4888 5648 2.554032 GACCGGCATGGGATAATCAAAG 59.446 50.000 0.00 0.00 44.64 2.77
4889 5649 2.174639 AGACCGGCATGGGATAATCAAA 59.825 45.455 0.00 0.00 44.64 2.69
4890 5650 1.774254 AGACCGGCATGGGATAATCAA 59.226 47.619 0.00 0.00 44.64 2.57
4891 5651 1.072173 CAGACCGGCATGGGATAATCA 59.928 52.381 0.00 0.00 44.64 2.57
4892 5652 1.813513 CAGACCGGCATGGGATAATC 58.186 55.000 0.00 0.00 44.64 1.75
4893 5653 0.250901 GCAGACCGGCATGGGATAAT 60.251 55.000 0.00 0.00 44.64 1.28
4894 5654 1.148273 GCAGACCGGCATGGGATAA 59.852 57.895 0.00 0.00 44.64 1.75
4895 5655 1.631071 TTGCAGACCGGCATGGGATA 61.631 55.000 0.00 0.00 44.48 2.59
4896 5656 2.497792 TTTGCAGACCGGCATGGGAT 62.498 55.000 0.00 0.00 44.48 3.85
4897 5657 3.203086 TTTGCAGACCGGCATGGGA 62.203 57.895 0.00 0.00 44.48 4.37
4898 5658 2.676121 TTTGCAGACCGGCATGGG 60.676 61.111 0.00 0.00 44.48 4.00
4899 5659 2.879907 CTTTGCAGACCGGCATGG 59.120 61.111 0.00 0.00 44.48 3.66
4900 5660 2.144833 TTGCTTTGCAGACCGGCATG 62.145 55.000 0.00 0.59 44.48 4.06
4901 5661 1.462731 TTTGCTTTGCAGACCGGCAT 61.463 50.000 0.00 0.00 44.48 4.40
4902 5662 1.670949 TTTTGCTTTGCAGACCGGCA 61.671 50.000 0.00 0.00 40.61 5.69
4903 5663 1.067250 TTTTGCTTTGCAGACCGGC 59.933 52.632 0.00 0.00 40.61 6.13
4904 5664 0.102120 TGTTTTGCTTTGCAGACCGG 59.898 50.000 0.00 0.00 40.61 5.28
4905 5665 1.919918 TTGTTTTGCTTTGCAGACCG 58.080 45.000 0.00 0.00 40.61 4.79
4906 5666 3.456280 TGATTGTTTTGCTTTGCAGACC 58.544 40.909 0.00 0.00 40.61 3.85
4907 5667 4.260334 GGTTGATTGTTTTGCTTTGCAGAC 60.260 41.667 0.00 0.00 40.61 3.51
4908 5668 3.870419 GGTTGATTGTTTTGCTTTGCAGA 59.130 39.130 0.00 0.00 40.61 4.26
4909 5669 3.002553 GGGTTGATTGTTTTGCTTTGCAG 59.997 43.478 0.00 0.00 40.61 4.41
4910 5670 2.941720 GGGTTGATTGTTTTGCTTTGCA 59.058 40.909 0.00 0.00 36.47 4.08
4911 5671 2.032979 CGGGTTGATTGTTTTGCTTTGC 60.033 45.455 0.00 0.00 0.00 3.68
4912 5672 2.543430 CCGGGTTGATTGTTTTGCTTTG 59.457 45.455 0.00 0.00 0.00 2.77
4913 5673 2.484594 CCCGGGTTGATTGTTTTGCTTT 60.485 45.455 14.18 0.00 0.00 3.51
4914 5674 1.069978 CCCGGGTTGATTGTTTTGCTT 59.930 47.619 14.18 0.00 0.00 3.91
4915 5675 0.678950 CCCGGGTTGATTGTTTTGCT 59.321 50.000 14.18 0.00 0.00 3.91
4916 5676 0.676736 TCCCGGGTTGATTGTTTTGC 59.323 50.000 22.86 0.00 0.00 3.68
4917 5677 3.676291 ATTCCCGGGTTGATTGTTTTG 57.324 42.857 22.86 0.00 0.00 2.44
4918 5678 4.101741 TCAAATTCCCGGGTTGATTGTTTT 59.898 37.500 22.86 7.08 0.00 2.43
4919 5679 3.643792 TCAAATTCCCGGGTTGATTGTTT 59.356 39.130 22.86 9.18 0.00 2.83
4920 5680 3.006430 GTCAAATTCCCGGGTTGATTGTT 59.994 43.478 23.52 7.25 34.04 2.83
4921 5681 2.560981 GTCAAATTCCCGGGTTGATTGT 59.439 45.455 23.52 10.35 34.04 2.71
4922 5682 2.415357 CGTCAAATTCCCGGGTTGATTG 60.415 50.000 23.52 20.85 34.04 2.67
4923 5683 1.816224 CGTCAAATTCCCGGGTTGATT 59.184 47.619 23.52 17.57 34.04 2.57
4924 5684 1.459450 CGTCAAATTCCCGGGTTGAT 58.541 50.000 23.52 13.20 34.04 2.57
4925 5685 0.606944 CCGTCAAATTCCCGGGTTGA 60.607 55.000 22.86 20.31 38.09 3.18
4926 5686 1.880186 CCGTCAAATTCCCGGGTTG 59.120 57.895 22.86 18.14 38.09 3.77
4927 5687 4.408378 CCGTCAAATTCCCGGGTT 57.592 55.556 22.86 5.21 38.09 4.11
4930 5690 0.393808 ATGACCCGTCAAATTCCCGG 60.394 55.000 0.91 0.00 43.58 5.73
4931 5691 2.319136 TATGACCCGTCAAATTCCCG 57.681 50.000 0.91 0.00 43.58 5.14
4932 5692 2.949644 CCTTATGACCCGTCAAATTCCC 59.050 50.000 0.91 0.00 43.58 3.97
4933 5693 3.626217 GTCCTTATGACCCGTCAAATTCC 59.374 47.826 0.91 0.00 43.58 3.01
4934 5694 4.094442 GTGTCCTTATGACCCGTCAAATTC 59.906 45.833 0.91 0.00 43.78 2.17
4935 5695 4.007659 GTGTCCTTATGACCCGTCAAATT 58.992 43.478 0.91 0.00 43.78 1.82
4936 5696 3.008594 TGTGTCCTTATGACCCGTCAAAT 59.991 43.478 0.91 0.00 43.78 2.32
4937 5697 2.369203 TGTGTCCTTATGACCCGTCAAA 59.631 45.455 0.91 0.00 43.78 2.69
4938 5698 1.972075 TGTGTCCTTATGACCCGTCAA 59.028 47.619 0.91 0.00 43.78 3.18
4939 5699 1.634960 TGTGTCCTTATGACCCGTCA 58.365 50.000 0.00 0.00 43.78 4.35
4940 5700 2.754946 TTGTGTCCTTATGACCCGTC 57.245 50.000 0.00 0.00 43.78 4.79
4941 5701 3.495434 TTTTGTGTCCTTATGACCCGT 57.505 42.857 0.00 0.00 43.78 5.28
4942 5702 3.365969 GCTTTTTGTGTCCTTATGACCCG 60.366 47.826 0.00 0.00 43.78 5.28
4943 5703 3.572255 TGCTTTTTGTGTCCTTATGACCC 59.428 43.478 0.00 0.00 43.78 4.46
4944 5704 4.278419 ACTGCTTTTTGTGTCCTTATGACC 59.722 41.667 0.00 0.00 43.78 4.02
4945 5705 5.438761 ACTGCTTTTTGTGTCCTTATGAC 57.561 39.130 0.00 0.00 44.72 3.06
4946 5706 5.178623 CGTACTGCTTTTTGTGTCCTTATGA 59.821 40.000 0.00 0.00 0.00 2.15
4947 5707 5.178623 TCGTACTGCTTTTTGTGTCCTTATG 59.821 40.000 0.00 0.00 0.00 1.90
4948 5708 5.302360 TCGTACTGCTTTTTGTGTCCTTAT 58.698 37.500 0.00 0.00 0.00 1.73
4949 5709 4.695396 TCGTACTGCTTTTTGTGTCCTTA 58.305 39.130 0.00 0.00 0.00 2.69
4950 5710 3.537580 TCGTACTGCTTTTTGTGTCCTT 58.462 40.909 0.00 0.00 0.00 3.36
4951 5711 3.188159 TCGTACTGCTTTTTGTGTCCT 57.812 42.857 0.00 0.00 0.00 3.85
4952 5712 3.955771 TTCGTACTGCTTTTTGTGTCC 57.044 42.857 0.00 0.00 0.00 4.02
4953 5713 4.654015 TGTTTCGTACTGCTTTTTGTGTC 58.346 39.130 0.00 0.00 0.00 3.67
4954 5714 4.688511 TGTTTCGTACTGCTTTTTGTGT 57.311 36.364 0.00 0.00 0.00 3.72
4955 5715 4.264380 GGTTGTTTCGTACTGCTTTTTGTG 59.736 41.667 0.00 0.00 0.00 3.33
4956 5716 4.082679 TGGTTGTTTCGTACTGCTTTTTGT 60.083 37.500 0.00 0.00 0.00 2.83
4957 5717 4.416620 TGGTTGTTTCGTACTGCTTTTTG 58.583 39.130 0.00 0.00 0.00 2.44
4958 5718 4.705337 TGGTTGTTTCGTACTGCTTTTT 57.295 36.364 0.00 0.00 0.00 1.94
4959 5719 4.911514 ATGGTTGTTTCGTACTGCTTTT 57.088 36.364 0.00 0.00 0.00 2.27
4960 5720 6.569179 AATATGGTTGTTTCGTACTGCTTT 57.431 33.333 0.00 0.00 0.00 3.51
4961 5721 6.569179 AAATATGGTTGTTTCGTACTGCTT 57.431 33.333 0.00 0.00 0.00 3.91
4962 5722 6.569179 AAAATATGGTTGTTTCGTACTGCT 57.431 33.333 0.00 0.00 0.00 4.24
4983 5743 8.739039 AGATGATATTTTGACGGACATGAAAAA 58.261 29.630 0.00 0.00 0.00 1.94
4984 5744 8.279970 AGATGATATTTTGACGGACATGAAAA 57.720 30.769 0.00 0.00 0.00 2.29
4985 5745 7.254421 CGAGATGATATTTTGACGGACATGAAA 60.254 37.037 0.00 0.00 0.00 2.69
4986 5746 6.200854 CGAGATGATATTTTGACGGACATGAA 59.799 38.462 0.00 0.00 0.00 2.57
4987 5747 5.691754 CGAGATGATATTTTGACGGACATGA 59.308 40.000 0.00 0.00 0.00 3.07
4988 5748 5.691754 TCGAGATGATATTTTGACGGACATG 59.308 40.000 0.00 0.00 0.00 3.21
4989 5749 5.842907 TCGAGATGATATTTTGACGGACAT 58.157 37.500 0.00 0.00 0.00 3.06
4990 5750 5.257082 TCGAGATGATATTTTGACGGACA 57.743 39.130 0.00 0.00 0.00 4.02
4991 5751 7.869016 TTATCGAGATGATATTTTGACGGAC 57.131 36.000 0.00 0.00 39.29 4.79
4992 5752 8.141909 ACTTTATCGAGATGATATTTTGACGGA 58.858 33.333 0.00 0.00 39.29 4.69
4993 5753 8.299262 ACTTTATCGAGATGATATTTTGACGG 57.701 34.615 0.00 0.00 39.29 4.79
5006 5766 8.827677 GCCAATAACTGTTTACTTTATCGAGAT 58.172 33.333 0.00 0.00 0.00 2.75
5007 5767 7.279313 GGCCAATAACTGTTTACTTTATCGAGA 59.721 37.037 0.00 0.00 0.00 4.04
5008 5768 7.280205 AGGCCAATAACTGTTTACTTTATCGAG 59.720 37.037 5.01 0.00 0.00 4.04
5009 5769 7.107542 AGGCCAATAACTGTTTACTTTATCGA 58.892 34.615 5.01 0.00 0.00 3.59
5010 5770 7.316544 AGGCCAATAACTGTTTACTTTATCG 57.683 36.000 5.01 0.00 0.00 2.92
5011 5771 7.279313 TCGAGGCCAATAACTGTTTACTTTATC 59.721 37.037 5.01 0.00 0.00 1.75
5012 5772 7.107542 TCGAGGCCAATAACTGTTTACTTTAT 58.892 34.615 5.01 0.00 0.00 1.40
5013 5773 6.465948 TCGAGGCCAATAACTGTTTACTTTA 58.534 36.000 5.01 0.00 0.00 1.85
5014 5774 5.310451 TCGAGGCCAATAACTGTTTACTTT 58.690 37.500 5.01 0.00 0.00 2.66
5015 5775 4.901868 TCGAGGCCAATAACTGTTTACTT 58.098 39.130 5.01 0.00 0.00 2.24
5016 5776 4.546829 TCGAGGCCAATAACTGTTTACT 57.453 40.909 5.01 0.00 0.00 2.24
5017 5777 5.006746 CAGATCGAGGCCAATAACTGTTTAC 59.993 44.000 5.01 0.00 0.00 2.01
5018 5778 5.105106 TCAGATCGAGGCCAATAACTGTTTA 60.105 40.000 5.01 0.00 0.00 2.01
5019 5779 3.941483 CAGATCGAGGCCAATAACTGTTT 59.059 43.478 5.01 0.00 0.00 2.83
5020 5780 3.197766 TCAGATCGAGGCCAATAACTGTT 59.802 43.478 5.01 0.00 0.00 3.16
5021 5781 2.766263 TCAGATCGAGGCCAATAACTGT 59.234 45.455 5.01 0.00 0.00 3.55
5022 5782 3.459232 TCAGATCGAGGCCAATAACTG 57.541 47.619 5.01 9.18 0.00 3.16
5023 5783 4.696479 ATTCAGATCGAGGCCAATAACT 57.304 40.909 5.01 0.00 0.00 2.24
5024 5784 5.758296 TGTTATTCAGATCGAGGCCAATAAC 59.242 40.000 17.72 17.72 37.28 1.89
5025 5785 5.924356 TGTTATTCAGATCGAGGCCAATAA 58.076 37.500 5.01 0.69 0.00 1.40
5026 5786 5.545063 TGTTATTCAGATCGAGGCCAATA 57.455 39.130 5.01 0.00 0.00 1.90
5027 5787 4.422073 TGTTATTCAGATCGAGGCCAAT 57.578 40.909 5.01 0.00 0.00 3.16
5028 5788 3.904800 TGTTATTCAGATCGAGGCCAA 57.095 42.857 5.01 0.00 0.00 4.52
5029 5789 3.387699 TGATGTTATTCAGATCGAGGCCA 59.612 43.478 5.01 0.00 0.00 5.36
5030 5790 3.995199 TGATGTTATTCAGATCGAGGCC 58.005 45.455 0.00 0.00 0.00 5.19
5031 5791 4.084118 GCTTGATGTTATTCAGATCGAGGC 60.084 45.833 0.00 0.00 0.00 4.70
5032 5792 5.050499 GTGCTTGATGTTATTCAGATCGAGG 60.050 44.000 0.00 0.00 0.00 4.63
5033 5793 5.752472 AGTGCTTGATGTTATTCAGATCGAG 59.248 40.000 0.00 0.00 0.00 4.04
5034 5794 5.664457 AGTGCTTGATGTTATTCAGATCGA 58.336 37.500 0.00 0.00 0.00 3.59
5035 5795 5.980698 AGTGCTTGATGTTATTCAGATCG 57.019 39.130 0.00 0.00 0.00 3.69
5036 5796 7.041576 TGCATAGTGCTTGATGTTATTCAGATC 60.042 37.037 3.41 0.00 45.31 2.75
5037 5797 6.769341 TGCATAGTGCTTGATGTTATTCAGAT 59.231 34.615 3.41 0.00 45.31 2.90
5038 5798 6.114767 TGCATAGTGCTTGATGTTATTCAGA 58.885 36.000 3.41 0.00 45.31 3.27
5039 5799 6.367686 TGCATAGTGCTTGATGTTATTCAG 57.632 37.500 3.41 0.00 45.31 3.02
5040 5800 6.598850 TCTTGCATAGTGCTTGATGTTATTCA 59.401 34.615 3.41 0.00 45.31 2.57
5041 5801 7.019774 TCTTGCATAGTGCTTGATGTTATTC 57.980 36.000 3.41 0.00 45.31 1.75
5042 5802 7.501559 AGATCTTGCATAGTGCTTGATGTTATT 59.498 33.333 12.27 0.00 45.31 1.40
5043 5803 6.996879 AGATCTTGCATAGTGCTTGATGTTAT 59.003 34.615 12.27 0.00 45.31 1.89
5044 5804 6.351711 AGATCTTGCATAGTGCTTGATGTTA 58.648 36.000 12.27 0.00 45.31 2.41
5045 5805 5.191426 AGATCTTGCATAGTGCTTGATGTT 58.809 37.500 12.27 2.52 45.31 2.71
5046 5806 4.778579 AGATCTTGCATAGTGCTTGATGT 58.221 39.130 12.27 7.73 45.31 3.06
5047 5807 4.213694 GGAGATCTTGCATAGTGCTTGATG 59.786 45.833 0.00 0.00 45.31 3.07
5048 5808 4.387598 GGAGATCTTGCATAGTGCTTGAT 58.612 43.478 0.00 6.70 45.31 2.57
5049 5809 3.432749 GGGAGATCTTGCATAGTGCTTGA 60.433 47.826 0.00 2.33 45.31 3.02
5050 5810 2.877168 GGGAGATCTTGCATAGTGCTTG 59.123 50.000 0.00 0.00 45.31 4.01
5051 5811 2.158696 GGGGAGATCTTGCATAGTGCTT 60.159 50.000 0.00 0.00 45.31 3.91
5052 5812 1.419387 GGGGAGATCTTGCATAGTGCT 59.581 52.381 0.00 0.00 45.31 4.40
5053 5813 1.544314 GGGGGAGATCTTGCATAGTGC 60.544 57.143 0.00 0.00 45.29 4.40
5054 5814 2.053244 AGGGGGAGATCTTGCATAGTG 58.947 52.381 0.00 0.00 0.00 2.74
5055 5815 2.503869 AGGGGGAGATCTTGCATAGT 57.496 50.000 0.00 0.00 0.00 2.12
5056 5816 4.099633 TGATAGGGGGAGATCTTGCATAG 58.900 47.826 0.00 0.00 0.00 2.23
5057 5817 4.146245 TGATAGGGGGAGATCTTGCATA 57.854 45.455 0.00 0.00 0.00 3.14
5058 5818 2.995746 TGATAGGGGGAGATCTTGCAT 58.004 47.619 0.00 0.00 0.00 3.96
5059 5819 2.494888 TGATAGGGGGAGATCTTGCA 57.505 50.000 0.00 0.00 0.00 4.08
5060 5820 4.323868 GGTTATGATAGGGGGAGATCTTGC 60.324 50.000 0.00 0.00 0.00 4.01
5061 5821 4.081420 CGGTTATGATAGGGGGAGATCTTG 60.081 50.000 0.00 0.00 0.00 3.02
5062 5822 4.097418 CGGTTATGATAGGGGGAGATCTT 58.903 47.826 0.00 0.00 0.00 2.40
5063 5823 3.336997 TCGGTTATGATAGGGGGAGATCT 59.663 47.826 0.00 0.00 0.00 2.75
5064 5824 3.702045 CTCGGTTATGATAGGGGGAGATC 59.298 52.174 0.00 0.00 0.00 2.75
5065 5825 3.077695 ACTCGGTTATGATAGGGGGAGAT 59.922 47.826 0.00 0.00 0.00 2.75
5066 5826 2.449730 ACTCGGTTATGATAGGGGGAGA 59.550 50.000 0.00 0.00 0.00 3.71
5067 5827 2.890814 ACTCGGTTATGATAGGGGGAG 58.109 52.381 0.00 0.00 0.00 4.30
5068 5828 3.236896 GAACTCGGTTATGATAGGGGGA 58.763 50.000 0.00 0.00 0.00 4.81
5069 5829 2.302157 GGAACTCGGTTATGATAGGGGG 59.698 54.545 0.00 0.00 0.00 5.40
5070 5830 3.240302 AGGAACTCGGTTATGATAGGGG 58.760 50.000 0.00 0.00 0.00 4.79
5071 5831 5.303589 TGTTAGGAACTCGGTTATGATAGGG 59.696 44.000 0.00 0.00 41.75 3.53
5072 5832 6.401047 TGTTAGGAACTCGGTTATGATAGG 57.599 41.667 0.00 0.00 41.75 2.57
5073 5833 7.490000 ACTTGTTAGGAACTCGGTTATGATAG 58.510 38.462 0.00 0.00 41.75 2.08
5074 5834 7.414222 ACTTGTTAGGAACTCGGTTATGATA 57.586 36.000 0.00 0.00 41.75 2.15
5075 5835 6.295719 ACTTGTTAGGAACTCGGTTATGAT 57.704 37.500 0.00 0.00 41.75 2.45
5076 5836 5.733620 ACTTGTTAGGAACTCGGTTATGA 57.266 39.130 0.00 0.00 41.75 2.15
5077 5837 6.628185 AGTACTTGTTAGGAACTCGGTTATG 58.372 40.000 0.00 0.00 41.75 1.90
5078 5838 6.127507 GGAGTACTTGTTAGGAACTCGGTTAT 60.128 42.308 0.00 0.00 41.75 1.89
5079 5839 5.183904 GGAGTACTTGTTAGGAACTCGGTTA 59.816 44.000 0.00 0.00 41.75 2.85
5080 5840 4.021632 GGAGTACTTGTTAGGAACTCGGTT 60.022 45.833 0.00 0.00 41.75 4.44
5081 5841 3.509184 GGAGTACTTGTTAGGAACTCGGT 59.491 47.826 0.00 0.00 41.75 4.69
5082 5842 3.119209 GGGAGTACTTGTTAGGAACTCGG 60.119 52.174 0.00 0.00 41.75 4.63
5083 5843 3.762823 AGGGAGTACTTGTTAGGAACTCG 59.237 47.826 0.00 0.00 41.75 4.18
5084 5844 4.160065 GGAGGGAGTACTTGTTAGGAACTC 59.840 50.000 0.00 0.00 41.75 3.01
5085 5845 4.095211 GGAGGGAGTACTTGTTAGGAACT 58.905 47.826 0.00 0.00 46.37 3.01
5086 5846 3.119209 CGGAGGGAGTACTTGTTAGGAAC 60.119 52.174 0.00 0.00 0.00 3.62
5087 5847 3.094572 CGGAGGGAGTACTTGTTAGGAA 58.905 50.000 0.00 0.00 0.00 3.36
5088 5848 2.042162 ACGGAGGGAGTACTTGTTAGGA 59.958 50.000 0.00 0.00 0.00 2.94
5089 5849 2.454538 ACGGAGGGAGTACTTGTTAGG 58.545 52.381 0.00 0.00 0.00 2.69
5090 5850 3.762823 AGAACGGAGGGAGTACTTGTTAG 59.237 47.826 0.00 0.00 0.00 2.34
5091 5851 3.508793 CAGAACGGAGGGAGTACTTGTTA 59.491 47.826 0.00 0.00 0.00 2.41
5092 5852 2.299297 CAGAACGGAGGGAGTACTTGTT 59.701 50.000 0.00 0.00 0.00 2.83
5093 5853 1.893801 CAGAACGGAGGGAGTACTTGT 59.106 52.381 0.00 0.00 0.00 3.16
5094 5854 2.168496 TCAGAACGGAGGGAGTACTTG 58.832 52.381 0.00 0.00 0.00 3.16
5095 5855 2.599408 TCAGAACGGAGGGAGTACTT 57.401 50.000 0.00 0.00 0.00 2.24
5096 5856 2.830651 ATCAGAACGGAGGGAGTACT 57.169 50.000 0.00 0.00 0.00 2.73
5097 5857 3.889520 AAATCAGAACGGAGGGAGTAC 57.110 47.619 0.00 0.00 0.00 2.73
5098 5858 4.607239 AGTAAATCAGAACGGAGGGAGTA 58.393 43.478 0.00 0.00 0.00 2.59
5099 5859 3.442076 AGTAAATCAGAACGGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
5100 5860 3.489398 CGAGTAAATCAGAACGGAGGGAG 60.489 52.174 0.00 0.00 0.00 4.30
5101 5861 2.426024 CGAGTAAATCAGAACGGAGGGA 59.574 50.000 0.00 0.00 0.00 4.20
5102 5862 2.165845 ACGAGTAAATCAGAACGGAGGG 59.834 50.000 0.00 0.00 0.00 4.30
5103 5863 3.436496 GACGAGTAAATCAGAACGGAGG 58.564 50.000 0.00 0.00 0.00 4.30
5104 5864 3.099362 CGACGAGTAAATCAGAACGGAG 58.901 50.000 0.00 0.00 0.00 4.63
5105 5865 2.485426 ACGACGAGTAAATCAGAACGGA 59.515 45.455 0.00 0.00 0.00 4.69
5106 5866 2.592897 CACGACGAGTAAATCAGAACGG 59.407 50.000 0.00 0.00 0.00 4.44
5107 5867 2.592897 CCACGACGAGTAAATCAGAACG 59.407 50.000 0.00 0.00 0.00 3.95
5108 5868 3.572584 ACCACGACGAGTAAATCAGAAC 58.427 45.455 0.00 0.00 0.00 3.01
5109 5869 3.928727 ACCACGACGAGTAAATCAGAA 57.071 42.857 0.00 0.00 0.00 3.02
5110 5870 3.928727 AACCACGACGAGTAAATCAGA 57.071 42.857 0.00 0.00 0.00 3.27
5111 5871 4.985044 AAAACCACGACGAGTAAATCAG 57.015 40.909 0.00 0.00 0.00 2.90
5112 5872 5.531634 ACTAAAACCACGACGAGTAAATCA 58.468 37.500 0.00 0.00 0.00 2.57
5113 5873 6.144402 TGAACTAAAACCACGACGAGTAAATC 59.856 38.462 0.00 0.00 0.00 2.17
5114 5874 5.984926 TGAACTAAAACCACGACGAGTAAAT 59.015 36.000 0.00 0.00 0.00 1.40
5115 5875 5.347342 TGAACTAAAACCACGACGAGTAAA 58.653 37.500 0.00 0.00 0.00 2.01
5116 5876 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
5117 5877 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
5118 5878 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
5119 5879 4.046462 TCTTGAACTAAAACCACGACGAG 58.954 43.478 0.00 0.00 0.00 4.18
5120 5880 3.798337 GTCTTGAACTAAAACCACGACGA 59.202 43.478 0.00 0.00 0.00 4.20
5121 5881 3.361339 CGTCTTGAACTAAAACCACGACG 60.361 47.826 0.00 0.00 42.77 5.12
5122 5882 3.798337 TCGTCTTGAACTAAAACCACGAC 59.202 43.478 0.00 0.00 30.50 4.34
5123 5883 4.044336 TCGTCTTGAACTAAAACCACGA 57.956 40.909 0.00 0.00 32.91 4.35
5124 5884 3.800506 ACTCGTCTTGAACTAAAACCACG 59.199 43.478 0.00 0.00 0.00 4.94
5125 5885 6.833342 TTACTCGTCTTGAACTAAAACCAC 57.167 37.500 0.00 0.00 0.00 4.16
5126 5886 7.711772 TGATTTACTCGTCTTGAACTAAAACCA 59.288 33.333 0.00 0.00 0.00 3.67
5127 5887 8.080083 TGATTTACTCGTCTTGAACTAAAACC 57.920 34.615 0.00 0.00 0.00 3.27
5128 5888 8.975439 TCTGATTTACTCGTCTTGAACTAAAAC 58.025 33.333 0.00 0.00 0.00 2.43
5129 5889 9.537192 TTCTGATTTACTCGTCTTGAACTAAAA 57.463 29.630 0.00 0.00 0.00 1.52
5130 5890 9.706691 ATTCTGATTTACTCGTCTTGAACTAAA 57.293 29.630 0.00 0.00 0.00 1.85
5131 5891 9.140286 CATTCTGATTTACTCGTCTTGAACTAA 57.860 33.333 0.00 0.00 0.00 2.24
5132 5892 7.759886 CCATTCTGATTTACTCGTCTTGAACTA 59.240 37.037 0.00 0.00 0.00 2.24
5133 5893 6.591834 CCATTCTGATTTACTCGTCTTGAACT 59.408 38.462 0.00 0.00 0.00 3.01
5134 5894 6.766084 CCATTCTGATTTACTCGTCTTGAAC 58.234 40.000 0.00 0.00 0.00 3.18
5135 5895 6.968131 CCATTCTGATTTACTCGTCTTGAA 57.032 37.500 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.