Multiple sequence alignment - TraesCS1B01G285300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G285300 chr1B 100.000 6876 0 0 1 6876 496101511 496094636 0.000000e+00 12698.0
1 TraesCS1B01G285300 chr1B 90.244 205 17 2 1 202 496143171 496142967 1.470000e-66 265.0
2 TraesCS1B01G285300 chr1D 95.839 5720 163 25 681 6346 371663300 371657602 0.000000e+00 9175.0
3 TraesCS1B01G285300 chr1D 83.964 555 33 17 6376 6876 371657615 371657063 1.340000e-131 481.0
4 TraesCS1B01G285300 chr1A 96.282 3523 87 14 2747 6241 471324116 471320610 0.000000e+00 5740.0
5 TraesCS1B01G285300 chr1A 92.374 2439 112 24 317 2749 471326581 471324211 0.000000e+00 3406.0
6 TraesCS1B01G285300 chr1A 84.112 428 23 7 6473 6876 471320440 471320034 8.420000e-99 372.0
7 TraesCS1B01G285300 chr1A 89.683 126 8 5 6223 6346 497512228 497512350 9.230000e-34 156.0
8 TraesCS1B01G285300 chr1A 89.516 124 9 4 6226 6346 385897655 385897533 3.320000e-33 154.0
9 TraesCS1B01G285300 chr1A 92.308 52 1 3 6413 6462 471320523 471320473 3.440000e-08 71.3
10 TraesCS1B01G285300 chr5B 84.901 808 65 21 2676 3453 509687617 509686837 0.000000e+00 763.0
11 TraesCS1B01G285300 chr5B 87.500 192 24 0 2 193 372077138 372076947 8.980000e-54 222.0
12 TraesCS1B01G285300 chr5B 90.698 43 4 0 6384 6426 341534094 341534052 2.680000e-04 58.4
13 TraesCS1B01G285300 chr7B 84.653 808 67 21 2676 3453 726106566 726105786 0.000000e+00 752.0
14 TraesCS1B01G285300 chr7B 86.727 550 67 5 2173 2720 749298548 749299093 2.120000e-169 606.0
15 TraesCS1B01G285300 chr7B 88.863 422 38 7 2303 2720 408937297 408937713 1.710000e-140 510.0
16 TraesCS1B01G285300 chr6B 84.549 809 64 23 2676 3453 547719173 547719951 0.000000e+00 745.0
17 TraesCS1B01G285300 chr6B 88.021 192 22 1 2 192 171324348 171324157 6.940000e-55 226.0
18 TraesCS1B01G285300 chr6B 88.372 129 10 3 6222 6346 226361504 226361631 4.300000e-32 150.0
19 TraesCS1B01G285300 chr7D 84.406 808 69 17 2676 3453 53681718 53680938 0.000000e+00 741.0
20 TraesCS1B01G285300 chr7D 87.245 196 24 1 1 196 400267192 400267386 8.980000e-54 222.0
21 TraesCS1B01G285300 chr2A 87.455 550 62 6 2173 2720 160836456 160835912 1.630000e-175 627.0
22 TraesCS1B01G285300 chr2A 95.122 41 2 0 6396 6436 186795000 186794960 1.600000e-06 65.8
23 TraesCS1B01G285300 chr2D 89.100 422 38 6 2303 2720 352981327 352980910 1.020000e-142 518.0
24 TraesCS1B01G285300 chr2D 84.507 213 25 3 1 205 351649571 351649359 3.250000e-48 204.0
25 TraesCS1B01G285300 chr2D 90.083 121 8 2 6229 6347 373883600 373883482 3.320000e-33 154.0
26 TraesCS1B01G285300 chr2D 97.436 39 1 0 2805 2843 352980845 352980807 4.450000e-07 67.6
27 TraesCS1B01G285300 chr3B 88.389 422 41 6 2303 2720 68462444 68462027 1.030000e-137 501.0
28 TraesCS1B01G285300 chr3B 88.389 422 41 6 2303 2720 778243751 778244168 1.030000e-137 501.0
29 TraesCS1B01G285300 chr3B 90.476 63 5 1 6376 6437 519860145 519860083 1.590000e-11 82.4
30 TraesCS1B01G285300 chr3B 88.333 60 6 1 6378 6436 744317198 744317257 3.440000e-08 71.3
31 TraesCS1B01G285300 chrUn 88.152 422 42 7 2303 2720 387670480 387670897 4.790000e-136 496.0
32 TraesCS1B01G285300 chr5A 88.152 422 42 7 2303 2720 216669718 216669301 4.790000e-136 496.0
33 TraesCS1B01G285300 chr4B 89.119 193 20 1 2 193 588325771 588325579 8.910000e-59 239.0
34 TraesCS1B01G285300 chr4B 91.597 119 7 2 6230 6346 446519539 446519422 1.980000e-35 161.0
35 TraesCS1B01G285300 chr4B 97.561 41 1 0 2805 2845 203527411 203527371 3.440000e-08 71.3
36 TraesCS1B01G285300 chr5D 87.568 185 23 0 9 193 397497187 397497003 1.500000e-51 215.0
37 TraesCS1B01G285300 chr3A 85.714 203 22 3 1 196 70677063 70677265 2.510000e-49 207.0
38 TraesCS1B01G285300 chr3A 85.784 204 20 5 1 196 645032158 645032360 2.510000e-49 207.0
39 TraesCS1B01G285300 chr3A 91.597 119 6 4 6231 6346 534181858 534181975 1.980000e-35 161.0
40 TraesCS1B01G285300 chr6A 91.525 118 8 1 6231 6346 1838601 1838484 1.980000e-35 161.0
41 TraesCS1B01G285300 chr2B 90.164 122 9 2 6229 6347 443765540 443765419 9.230000e-34 156.0
42 TraesCS1B01G285300 chr3D 86.667 60 7 1 6378 6436 549747991 549748050 1.600000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G285300 chr1B 496094636 496101511 6875 True 12698.000 12698 100.0000 1 6876 1 chr1B.!!$R1 6875
1 TraesCS1B01G285300 chr1D 371657063 371663300 6237 True 4828.000 9175 89.9015 681 6876 2 chr1D.!!$R1 6195
2 TraesCS1B01G285300 chr1A 471320034 471326581 6547 True 2397.325 5740 91.2690 317 6876 4 chr1A.!!$R2 6559
3 TraesCS1B01G285300 chr5B 509686837 509687617 780 True 763.000 763 84.9010 2676 3453 1 chr5B.!!$R3 777
4 TraesCS1B01G285300 chr7B 726105786 726106566 780 True 752.000 752 84.6530 2676 3453 1 chr7B.!!$R1 777
5 TraesCS1B01G285300 chr7B 749298548 749299093 545 False 606.000 606 86.7270 2173 2720 1 chr7B.!!$F2 547
6 TraesCS1B01G285300 chr6B 547719173 547719951 778 False 745.000 745 84.5490 2676 3453 1 chr6B.!!$F2 777
7 TraesCS1B01G285300 chr7D 53680938 53681718 780 True 741.000 741 84.4060 2676 3453 1 chr7D.!!$R1 777
8 TraesCS1B01G285300 chr2A 160835912 160836456 544 True 627.000 627 87.4550 2173 2720 1 chr2A.!!$R1 547
9 TraesCS1B01G285300 chr2D 352980807 352981327 520 True 292.800 518 93.2680 2303 2843 2 chr2D.!!$R3 540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
789 794 0.034896 AAACTAGGCCTGGTGACGTG 59.965 55.000 24.00 1.26 0.00 4.49 F
1606 1635 0.173935 CGTATGGCGTCACCCAAGTA 59.826 55.000 0.00 0.00 38.61 2.24 F
2442 2480 0.663153 AGCACTTCCGTTTCTGCAAC 59.337 50.000 0.00 0.00 31.71 4.17 F
3572 3755 1.868713 ATTGGAATCCATGCCAAGCA 58.131 45.000 1.39 0.00 46.38 3.91 F
5160 5356 2.970609 CGTTTTGTAATGCGGTTCACAG 59.029 45.455 0.00 0.00 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2102 2134 0.685458 GGCATGGCATCTTCAAGGGT 60.685 55.000 15.47 0.0 0.00 4.34 R
3245 3419 0.396435 CCTAACAGGTCAGTGGCACA 59.604 55.000 21.41 0.0 0.00 4.57 R
3758 3944 4.552166 TGCTTTGCACTTACTCTGTTTC 57.448 40.909 0.00 0.0 31.71 2.78 R
5532 5728 0.039764 GGGGTGGAGGAAAAGGAAGG 59.960 60.000 0.00 0.0 0.00 3.46 R
6373 6587 0.824759 ATGAACTACAGACGGAGCCC 59.175 55.000 0.00 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.042463 ACTAGATCGAAGATCAGGACAGA 57.958 43.478 11.94 0.00 45.12 3.41
24 25 5.441500 ACTAGATCGAAGATCAGGACAGAA 58.558 41.667 11.94 0.00 45.12 3.02
25 26 5.888724 ACTAGATCGAAGATCAGGACAGAAA 59.111 40.000 11.94 0.00 45.12 2.52
26 27 5.867903 AGATCGAAGATCAGGACAGAAAT 57.132 39.130 11.94 0.00 45.12 2.17
27 28 5.841810 AGATCGAAGATCAGGACAGAAATC 58.158 41.667 11.94 0.00 45.12 2.17
28 29 5.598005 AGATCGAAGATCAGGACAGAAATCT 59.402 40.000 11.94 0.00 45.12 2.40
29 30 5.255710 TCGAAGATCAGGACAGAAATCTC 57.744 43.478 0.00 0.00 0.00 2.75
30 31 4.041049 CGAAGATCAGGACAGAAATCTCG 58.959 47.826 0.00 0.00 0.00 4.04
31 32 4.201960 CGAAGATCAGGACAGAAATCTCGA 60.202 45.833 0.00 0.00 0.00 4.04
32 33 5.507149 CGAAGATCAGGACAGAAATCTCGAT 60.507 44.000 0.00 0.00 0.00 3.59
33 34 5.452078 AGATCAGGACAGAAATCTCGATC 57.548 43.478 0.00 0.00 31.66 3.69
34 35 3.699779 TCAGGACAGAAATCTCGATCG 57.300 47.619 9.36 9.36 0.00 3.69
35 36 3.279434 TCAGGACAGAAATCTCGATCGA 58.721 45.455 18.32 18.32 0.00 3.59
36 37 3.694566 TCAGGACAGAAATCTCGATCGAA 59.305 43.478 19.92 10.56 0.00 3.71
37 38 4.157840 TCAGGACAGAAATCTCGATCGAAA 59.842 41.667 19.92 6.39 0.00 3.46
38 39 4.864806 CAGGACAGAAATCTCGATCGAAAA 59.135 41.667 19.92 10.71 0.00 2.29
39 40 5.521735 CAGGACAGAAATCTCGATCGAAAAT 59.478 40.000 19.92 12.59 0.00 1.82
40 41 6.697455 CAGGACAGAAATCTCGATCGAAAATA 59.303 38.462 19.92 5.47 0.00 1.40
41 42 7.222805 CAGGACAGAAATCTCGATCGAAAATAA 59.777 37.037 19.92 2.95 0.00 1.40
42 43 7.928706 AGGACAGAAATCTCGATCGAAAATAAT 59.071 33.333 19.92 8.34 0.00 1.28
43 44 8.217778 GGACAGAAATCTCGATCGAAAATAATC 58.782 37.037 19.92 15.38 0.00 1.75
44 45 7.778386 ACAGAAATCTCGATCGAAAATAATCG 58.222 34.615 19.92 4.82 44.66 3.34
45 46 6.729736 CAGAAATCTCGATCGAAAATAATCGC 59.270 38.462 19.92 2.98 43.36 4.58
46 47 4.807754 ATCTCGATCGAAAATAATCGCG 57.192 40.909 19.92 0.00 43.36 5.87
47 48 2.977829 TCTCGATCGAAAATAATCGCGG 59.022 45.455 19.92 2.76 43.36 6.46
48 49 2.724690 CTCGATCGAAAATAATCGCGGT 59.275 45.455 19.92 0.00 43.36 5.68
49 50 3.117794 TCGATCGAAAATAATCGCGGTT 58.882 40.909 16.99 10.59 43.36 4.44
50 51 4.289342 TCGATCGAAAATAATCGCGGTTA 58.711 39.130 16.99 15.20 43.36 2.85
51 52 4.739228 TCGATCGAAAATAATCGCGGTTAA 59.261 37.500 16.92 0.00 43.36 2.01
52 53 5.231779 TCGATCGAAAATAATCGCGGTTAAA 59.768 36.000 16.92 0.00 43.36 1.52
53 54 5.332594 CGATCGAAAATAATCGCGGTTAAAC 59.667 40.000 16.92 6.98 42.44 2.01
54 55 4.896080 TCGAAAATAATCGCGGTTAAACC 58.104 39.130 16.92 5.16 42.44 3.27
55 56 4.030366 CGAAAATAATCGCGGTTAAACCC 58.970 43.478 16.92 5.51 35.85 4.11
56 57 4.201841 CGAAAATAATCGCGGTTAAACCCT 60.202 41.667 16.92 0.00 35.85 4.34
57 58 4.625972 AAATAATCGCGGTTAAACCCTG 57.374 40.909 16.92 0.00 33.75 4.45
58 59 2.027003 TAATCGCGGTTAAACCCTGG 57.973 50.000 9.89 0.00 33.75 4.45
59 60 0.325602 AATCGCGGTTAAACCCTGGA 59.674 50.000 0.78 0.00 33.75 3.86
60 61 0.325602 ATCGCGGTTAAACCCTGGAA 59.674 50.000 6.13 0.00 33.75 3.53
61 62 0.108207 TCGCGGTTAAACCCTGGAAA 59.892 50.000 6.13 0.00 33.75 3.13
62 63 0.953003 CGCGGTTAAACCCTGGAAAA 59.047 50.000 0.00 0.00 33.75 2.29
63 64 1.337387 CGCGGTTAAACCCTGGAAAAA 59.663 47.619 0.00 0.00 33.75 1.94
64 65 2.746269 GCGGTTAAACCCTGGAAAAAC 58.254 47.619 0.00 0.00 33.75 2.43
65 66 2.101082 GCGGTTAAACCCTGGAAAAACA 59.899 45.455 0.00 0.00 33.75 2.83
66 67 3.430513 GCGGTTAAACCCTGGAAAAACAA 60.431 43.478 0.00 0.00 33.75 2.83
67 68 4.756502 CGGTTAAACCCTGGAAAAACAAA 58.243 39.130 0.00 0.00 33.75 2.83
68 69 5.176592 CGGTTAAACCCTGGAAAAACAAAA 58.823 37.500 0.00 0.00 33.75 2.44
69 70 5.063691 CGGTTAAACCCTGGAAAAACAAAAC 59.936 40.000 0.00 0.00 33.75 2.43
70 71 5.938710 GGTTAAACCCTGGAAAAACAAAACA 59.061 36.000 0.00 0.00 30.04 2.83
71 72 6.600032 GGTTAAACCCTGGAAAAACAAAACAT 59.400 34.615 0.00 0.00 30.04 2.71
72 73 7.414651 GGTTAAACCCTGGAAAAACAAAACATG 60.415 37.037 0.00 0.00 30.04 3.21
73 74 5.428184 AACCCTGGAAAAACAAAACATGA 57.572 34.783 0.00 0.00 0.00 3.07
74 75 4.765273 ACCCTGGAAAAACAAAACATGAC 58.235 39.130 0.00 0.00 0.00 3.06
75 76 3.801594 CCCTGGAAAAACAAAACATGACG 59.198 43.478 0.00 0.00 0.00 4.35
76 77 4.440802 CCCTGGAAAAACAAAACATGACGA 60.441 41.667 0.00 0.00 0.00 4.20
77 78 5.105752 CCTGGAAAAACAAAACATGACGAA 58.894 37.500 0.00 0.00 0.00 3.85
78 79 5.005299 CCTGGAAAAACAAAACATGACGAAC 59.995 40.000 0.00 0.00 0.00 3.95
79 80 5.470368 TGGAAAAACAAAACATGACGAACA 58.530 33.333 0.00 0.00 0.00 3.18
80 81 5.574830 TGGAAAAACAAAACATGACGAACAG 59.425 36.000 0.00 0.00 0.00 3.16
81 82 5.005299 GGAAAAACAAAACATGACGAACAGG 59.995 40.000 0.00 0.00 36.29 4.00
82 83 2.774439 ACAAAACATGACGAACAGGC 57.226 45.000 0.00 0.00 33.22 4.85
83 84 2.297701 ACAAAACATGACGAACAGGCT 58.702 42.857 0.00 0.00 33.22 4.58
84 85 3.472652 ACAAAACATGACGAACAGGCTA 58.527 40.909 0.00 0.00 33.22 3.93
85 86 3.880490 ACAAAACATGACGAACAGGCTAA 59.120 39.130 0.00 0.00 33.22 3.09
86 87 4.219033 CAAAACATGACGAACAGGCTAAC 58.781 43.478 0.00 0.00 33.22 2.34
87 88 1.710013 ACATGACGAACAGGCTAACG 58.290 50.000 0.00 0.00 33.22 3.18
88 89 1.271379 ACATGACGAACAGGCTAACGA 59.729 47.619 0.00 0.00 33.22 3.85
89 90 2.288579 ACATGACGAACAGGCTAACGAA 60.289 45.455 0.00 3.19 33.22 3.85
90 91 1.774639 TGACGAACAGGCTAACGAAC 58.225 50.000 12.53 7.65 0.00 3.95
91 92 0.706729 GACGAACAGGCTAACGAACG 59.293 55.000 12.53 0.00 0.00 3.95
92 93 0.311790 ACGAACAGGCTAACGAACGA 59.688 50.000 12.53 0.00 0.00 3.85
93 94 1.269206 ACGAACAGGCTAACGAACGAA 60.269 47.619 12.53 0.00 0.00 3.85
94 95 1.990563 CGAACAGGCTAACGAACGAAT 59.009 47.619 0.14 0.00 0.00 3.34
95 96 2.222508 CGAACAGGCTAACGAACGAATG 60.223 50.000 0.14 0.00 0.00 2.67
96 97 2.450609 ACAGGCTAACGAACGAATGT 57.549 45.000 0.14 0.00 0.00 2.71
97 98 2.762745 ACAGGCTAACGAACGAATGTT 58.237 42.857 0.14 0.00 42.23 2.71
108 109 3.935133 CGAATGTTCGCTGTCTGTG 57.065 52.632 1.90 0.00 44.26 3.66
109 110 1.418373 CGAATGTTCGCTGTCTGTGA 58.582 50.000 1.90 0.00 44.26 3.58
110 111 1.125021 CGAATGTTCGCTGTCTGTGAC 59.875 52.381 1.90 0.00 44.26 3.67
111 112 2.408050 GAATGTTCGCTGTCTGTGACT 58.592 47.619 0.00 0.00 34.56 3.41
112 113 3.575630 GAATGTTCGCTGTCTGTGACTA 58.424 45.455 0.00 0.00 34.56 2.59
113 114 3.660501 ATGTTCGCTGTCTGTGACTAA 57.339 42.857 0.00 0.00 34.56 2.24
114 115 2.739292 TGTTCGCTGTCTGTGACTAAC 58.261 47.619 0.00 0.00 34.56 2.34
115 116 2.059541 GTTCGCTGTCTGTGACTAACC 58.940 52.381 0.00 0.00 34.56 2.85
116 117 0.240145 TCGCTGTCTGTGACTAACCG 59.760 55.000 0.00 0.00 33.15 4.44
117 118 0.240145 CGCTGTCTGTGACTAACCGA 59.760 55.000 0.00 0.00 33.15 4.69
118 119 1.699343 GCTGTCTGTGACTAACCGAC 58.301 55.000 0.00 0.00 41.86 4.79
119 120 1.965083 CTGTCTGTGACTAACCGACG 58.035 55.000 0.00 0.00 43.78 5.12
120 121 1.534163 CTGTCTGTGACTAACCGACGA 59.466 52.381 0.00 0.00 43.78 4.20
121 122 1.948834 TGTCTGTGACTAACCGACGAA 59.051 47.619 0.00 0.00 43.78 3.85
122 123 2.287188 TGTCTGTGACTAACCGACGAAC 60.287 50.000 0.00 0.00 43.78 3.95
123 124 1.948834 TCTGTGACTAACCGACGAACA 59.051 47.619 0.00 0.00 0.00 3.18
124 125 2.358582 TCTGTGACTAACCGACGAACAA 59.641 45.455 0.00 0.00 0.00 2.83
125 126 3.117794 CTGTGACTAACCGACGAACAAA 58.882 45.455 0.00 0.00 0.00 2.83
126 127 3.519579 TGTGACTAACCGACGAACAAAA 58.480 40.909 0.00 0.00 0.00 2.44
127 128 4.121317 TGTGACTAACCGACGAACAAAAT 58.879 39.130 0.00 0.00 0.00 1.82
128 129 4.571580 TGTGACTAACCGACGAACAAAATT 59.428 37.500 0.00 0.00 0.00 1.82
129 130 5.135330 GTGACTAACCGACGAACAAAATTC 58.865 41.667 0.00 0.00 0.00 2.17
130 131 4.084952 TGACTAACCGACGAACAAAATTCG 60.085 41.667 7.47 7.47 46.36 3.34
150 151 2.208834 GTTAAAACGAACGAACGAGCG 58.791 47.619 11.97 6.58 37.03 5.03
151 152 0.777631 TAAAACGAACGAACGAGCGG 59.222 50.000 11.97 0.00 37.03 5.52
152 153 1.824272 AAAACGAACGAACGAGCGGG 61.824 55.000 11.97 0.00 37.03 6.13
166 167 4.021650 CGGGCGCTCGCTAAATAA 57.978 55.556 20.49 0.00 41.60 1.40
167 168 1.563173 CGGGCGCTCGCTAAATAAC 59.437 57.895 20.49 0.00 41.60 1.89
168 169 0.874607 CGGGCGCTCGCTAAATAACT 60.875 55.000 20.49 0.00 41.60 2.24
169 170 1.601162 CGGGCGCTCGCTAAATAACTA 60.601 52.381 20.49 0.00 41.60 2.24
170 171 2.476821 GGGCGCTCGCTAAATAACTAA 58.523 47.619 7.64 0.00 41.60 2.24
171 172 2.867975 GGGCGCTCGCTAAATAACTAAA 59.132 45.455 7.64 0.00 41.60 1.85
172 173 3.302935 GGGCGCTCGCTAAATAACTAAAC 60.303 47.826 7.64 0.00 41.60 2.01
173 174 3.302935 GGCGCTCGCTAAATAACTAAACC 60.303 47.826 7.64 0.00 41.60 3.27
174 175 3.600909 GCGCTCGCTAAATAACTAAACCG 60.601 47.826 0.00 0.00 38.26 4.44
175 176 3.792956 CGCTCGCTAAATAACTAAACCGA 59.207 43.478 0.00 0.00 0.00 4.69
176 177 4.266029 CGCTCGCTAAATAACTAAACCGAA 59.734 41.667 0.00 0.00 0.00 4.30
177 178 5.220265 CGCTCGCTAAATAACTAAACCGAAA 60.220 40.000 0.00 0.00 0.00 3.46
178 179 6.536688 GCTCGCTAAATAACTAAACCGAAAA 58.463 36.000 0.00 0.00 0.00 2.29
179 180 7.017055 GCTCGCTAAATAACTAAACCGAAAAA 58.983 34.615 0.00 0.00 0.00 1.94
201 202 8.859517 AAAAACGAACCGATCTATTTTGAAAA 57.140 26.923 0.00 0.00 29.49 2.29
202 203 9.471084 AAAAACGAACCGATCTATTTTGAAAAT 57.529 25.926 8.35 8.35 29.49 1.82
203 204 8.669394 AAACGAACCGATCTATTTTGAAAATC 57.331 30.769 6.40 0.00 0.00 2.17
204 205 7.611213 ACGAACCGATCTATTTTGAAAATCT 57.389 32.000 6.40 0.00 0.00 2.40
205 206 7.464358 ACGAACCGATCTATTTTGAAAATCTG 58.536 34.615 6.40 2.25 0.00 2.90
206 207 6.907212 CGAACCGATCTATTTTGAAAATCTGG 59.093 38.462 6.40 5.86 0.00 3.86
207 208 6.699575 ACCGATCTATTTTGAAAATCTGGG 57.300 37.500 6.40 6.81 0.00 4.45
208 209 6.423182 ACCGATCTATTTTGAAAATCTGGGA 58.577 36.000 6.40 2.87 0.00 4.37
209 210 7.062957 ACCGATCTATTTTGAAAATCTGGGAT 58.937 34.615 6.40 7.11 0.00 3.85
210 211 7.013655 ACCGATCTATTTTGAAAATCTGGGATG 59.986 37.037 6.40 0.98 0.00 3.51
211 212 7.013655 CCGATCTATTTTGAAAATCTGGGATGT 59.986 37.037 6.40 0.00 0.00 3.06
212 213 8.408601 CGATCTATTTTGAAAATCTGGGATGTT 58.591 33.333 6.40 0.00 0.00 2.71
215 216 9.527157 TCTATTTTGAAAATCTGGGATGTTACA 57.473 29.630 6.40 0.00 0.00 2.41
218 219 8.830201 TTTTGAAAATCTGGGATGTTACAATG 57.170 30.769 0.00 0.00 0.00 2.82
219 220 7.773489 TTGAAAATCTGGGATGTTACAATGA 57.227 32.000 0.00 0.00 0.00 2.57
220 221 7.959658 TGAAAATCTGGGATGTTACAATGAT 57.040 32.000 0.00 0.00 0.00 2.45
221 222 7.774134 TGAAAATCTGGGATGTTACAATGATG 58.226 34.615 0.00 0.00 0.00 3.07
222 223 7.614974 TGAAAATCTGGGATGTTACAATGATGA 59.385 33.333 0.00 0.00 0.00 2.92
223 224 7.959658 AAATCTGGGATGTTACAATGATGAA 57.040 32.000 0.00 0.00 0.00 2.57
224 225 6.949352 ATCTGGGATGTTACAATGATGAAC 57.051 37.500 0.00 0.00 0.00 3.18
225 226 5.192927 TCTGGGATGTTACAATGATGAACC 58.807 41.667 0.00 0.00 0.00 3.62
226 227 5.044919 TCTGGGATGTTACAATGATGAACCT 60.045 40.000 0.00 0.00 0.00 3.50
227 228 5.192927 TGGGATGTTACAATGATGAACCTC 58.807 41.667 0.00 0.00 0.00 3.85
228 229 5.044919 TGGGATGTTACAATGATGAACCTCT 60.045 40.000 0.00 0.00 0.00 3.69
229 230 6.157820 TGGGATGTTACAATGATGAACCTCTA 59.842 38.462 0.00 0.00 0.00 2.43
230 231 6.708054 GGGATGTTACAATGATGAACCTCTAG 59.292 42.308 0.00 0.00 0.00 2.43
231 232 6.203723 GGATGTTACAATGATGAACCTCTAGC 59.796 42.308 0.00 0.00 0.00 3.42
232 233 6.048732 TGTTACAATGATGAACCTCTAGCA 57.951 37.500 0.00 0.00 0.00 3.49
233 234 5.874810 TGTTACAATGATGAACCTCTAGCAC 59.125 40.000 0.00 0.00 0.00 4.40
234 235 3.525537 ACAATGATGAACCTCTAGCACG 58.474 45.455 0.00 0.00 0.00 5.34
235 236 3.055819 ACAATGATGAACCTCTAGCACGT 60.056 43.478 0.00 0.00 0.00 4.49
236 237 3.895232 ATGATGAACCTCTAGCACGTT 57.105 42.857 0.00 0.00 0.00 3.99
237 238 2.959516 TGATGAACCTCTAGCACGTTG 58.040 47.619 0.00 0.00 0.00 4.10
238 239 1.661112 GATGAACCTCTAGCACGTTGC 59.339 52.381 2.28 2.28 45.46 4.17
239 240 0.320421 TGAACCTCTAGCACGTTGCC 60.320 55.000 6.39 0.00 46.52 4.52
240 241 1.003718 AACCTCTAGCACGTTGCCC 60.004 57.895 6.39 0.00 46.52 5.36
241 242 1.764571 AACCTCTAGCACGTTGCCCA 61.765 55.000 6.39 0.00 46.52 5.36
242 243 1.448540 CCTCTAGCACGTTGCCCAG 60.449 63.158 6.39 5.10 46.52 4.45
243 244 2.047274 TCTAGCACGTTGCCCAGC 60.047 61.111 6.39 0.00 46.52 4.85
244 245 3.490759 CTAGCACGTTGCCCAGCG 61.491 66.667 2.98 2.98 46.52 5.18
252 253 3.988525 TTGCCCAGCGCGCAAAAT 61.989 55.556 35.10 9.85 43.00 1.82
253 254 3.512223 TTGCCCAGCGCGCAAAATT 62.512 52.632 35.10 9.38 43.00 1.82
254 255 3.181290 GCCCAGCGCGCAAAATTC 61.181 61.111 35.10 12.94 0.00 2.17
255 256 2.506881 CCCAGCGCGCAAAATTCC 60.507 61.111 35.10 0.00 0.00 3.01
256 257 2.257980 CCAGCGCGCAAAATTCCA 59.742 55.556 35.10 0.00 0.00 3.53
257 258 1.802715 CCAGCGCGCAAAATTCCAG 60.803 57.895 35.10 10.36 0.00 3.86
258 259 2.126346 AGCGCGCAAAATTCCAGC 60.126 55.556 35.10 0.00 0.00 4.85
259 260 2.126346 GCGCGCAAAATTCCAGCT 60.126 55.556 29.10 0.00 0.00 4.24
260 261 1.136565 GCGCGCAAAATTCCAGCTA 59.863 52.632 29.10 0.00 0.00 3.32
261 262 0.863119 GCGCGCAAAATTCCAGCTAG 60.863 55.000 29.10 0.00 0.00 3.42
262 263 0.726827 CGCGCAAAATTCCAGCTAGA 59.273 50.000 8.75 0.00 0.00 2.43
263 264 1.529826 CGCGCAAAATTCCAGCTAGAC 60.530 52.381 8.75 0.00 0.00 2.59
264 265 1.202188 GCGCAAAATTCCAGCTAGACC 60.202 52.381 0.30 0.00 0.00 3.85
265 266 1.401905 CGCAAAATTCCAGCTAGACCC 59.598 52.381 0.00 0.00 0.00 4.46
266 267 2.446435 GCAAAATTCCAGCTAGACCCA 58.554 47.619 0.00 0.00 0.00 4.51
267 268 2.424956 GCAAAATTCCAGCTAGACCCAG 59.575 50.000 0.00 0.00 0.00 4.45
268 269 3.690460 CAAAATTCCAGCTAGACCCAGT 58.310 45.455 0.00 0.00 0.00 4.00
269 270 4.082125 CAAAATTCCAGCTAGACCCAGTT 58.918 43.478 0.00 0.00 0.00 3.16
270 271 3.356529 AATTCCAGCTAGACCCAGTTG 57.643 47.619 0.00 0.00 0.00 3.16
271 272 1.729586 TTCCAGCTAGACCCAGTTGT 58.270 50.000 0.00 0.00 0.00 3.32
272 273 1.267121 TCCAGCTAGACCCAGTTGTC 58.733 55.000 0.00 0.00 35.43 3.18
273 274 0.108615 CCAGCTAGACCCAGTTGTCG 60.109 60.000 0.00 0.00 40.26 4.35
274 275 0.108615 CAGCTAGACCCAGTTGTCGG 60.109 60.000 0.00 0.00 40.26 4.79
275 276 1.448013 GCTAGACCCAGTTGTCGGC 60.448 63.158 0.00 0.00 40.26 5.54
276 277 1.153823 CTAGACCCAGTTGTCGGCG 60.154 63.158 0.00 0.00 40.26 6.46
277 278 1.874345 CTAGACCCAGTTGTCGGCGT 61.874 60.000 6.85 0.00 40.26 5.68
278 279 1.870055 TAGACCCAGTTGTCGGCGTC 61.870 60.000 6.85 0.72 40.26 5.19
279 280 3.222354 GACCCAGTTGTCGGCGTCT 62.222 63.158 6.85 0.00 0.00 4.18
280 281 2.030562 CCCAGTTGTCGGCGTCTT 59.969 61.111 6.85 0.00 0.00 3.01
281 282 2.317609 CCCAGTTGTCGGCGTCTTG 61.318 63.158 6.85 2.05 0.00 3.02
282 283 2.551270 CAGTTGTCGGCGTCTTGC 59.449 61.111 6.85 0.00 45.38 4.01
293 294 3.793144 GTCTTGCCTCGCGCCAAG 61.793 66.667 20.53 20.53 36.24 3.61
294 295 4.314440 TCTTGCCTCGCGCCAAGT 62.314 61.111 23.41 0.00 36.24 3.16
295 296 3.357079 CTTGCCTCGCGCCAAGTT 61.357 61.111 19.17 0.00 36.24 2.66
296 297 3.599792 CTTGCCTCGCGCCAAGTTG 62.600 63.158 19.17 0.00 36.24 3.16
308 309 4.572571 AAGTTGGCCCGGTCGCAA 62.573 61.111 0.00 0.00 0.00 4.85
309 310 3.860930 AAGTTGGCCCGGTCGCAAT 62.861 57.895 0.00 0.00 0.00 3.56
310 311 2.437002 GTTGGCCCGGTCGCAATA 60.437 61.111 0.00 0.00 0.00 1.90
311 312 2.124901 TTGGCCCGGTCGCAATAG 60.125 61.111 0.00 0.00 0.00 1.73
312 313 3.690685 TTGGCCCGGTCGCAATAGG 62.691 63.158 0.00 0.00 0.00 2.57
313 314 4.171103 GGCCCGGTCGCAATAGGT 62.171 66.667 0.00 0.00 0.00 3.08
314 315 2.124860 GCCCGGTCGCAATAGGTT 60.125 61.111 0.00 0.00 0.00 3.50
315 316 2.469516 GCCCGGTCGCAATAGGTTG 61.470 63.158 0.00 0.00 38.39 3.77
329 330 0.975887 AGGTTGGGCGATGCATTTTT 59.024 45.000 0.00 0.00 0.00 1.94
331 332 1.066929 GGTTGGGCGATGCATTTTTCT 60.067 47.619 0.00 0.00 0.00 2.52
347 348 0.321298 TTCTGGGTCTTTAGCACGCC 60.321 55.000 0.00 0.00 0.00 5.68
360 361 1.657751 GCACGCCCCAAAATCTCCTC 61.658 60.000 0.00 0.00 0.00 3.71
392 393 3.150949 TGGTGCACCACTCCTCTG 58.849 61.111 34.74 0.00 42.01 3.35
395 396 1.294780 GTGCACCACTCCTCTGAGG 59.705 63.158 17.84 17.84 43.29 3.86
401 402 0.251634 CCACTCCTCTGAGGAAAGGC 59.748 60.000 25.58 0.00 45.28 4.35
425 430 3.877559 TCAACTATGATGCCTGTTGGAG 58.122 45.455 0.00 0.00 39.87 3.86
463 468 1.605712 CGACCGCCTCCTCATAAATCC 60.606 57.143 0.00 0.00 0.00 3.01
493 498 4.312052 GCAACCTCCGCCATAACA 57.688 55.556 0.00 0.00 0.00 2.41
495 500 1.654023 GCAACCTCCGCCATAACACC 61.654 60.000 0.00 0.00 0.00 4.16
502 507 0.960364 CCGCCATAACACCTGCAGTT 60.960 55.000 13.81 3.87 0.00 3.16
504 509 1.247567 GCCATAACACCTGCAGTTGT 58.752 50.000 11.63 11.63 0.00 3.32
515 520 2.598632 GCAGTTGTGAGCGAGCGTT 61.599 57.895 0.00 0.00 0.00 4.84
518 523 0.666577 AGTTGTGAGCGAGCGTTACC 60.667 55.000 0.00 0.00 0.00 2.85
520 525 0.942410 TTGTGAGCGAGCGTTACCAC 60.942 55.000 0.00 0.00 0.00 4.16
521 526 1.080705 GTGAGCGAGCGTTACCACT 60.081 57.895 0.00 0.00 0.00 4.00
531 536 2.629051 GCGTTACCACTAATGCTCCTT 58.371 47.619 0.00 0.00 40.46 3.36
536 541 5.353111 GTTACCACTAATGCTCCTTCTCTC 58.647 45.833 0.00 0.00 0.00 3.20
539 544 3.960102 CCACTAATGCTCCTTCTCTCTCT 59.040 47.826 0.00 0.00 0.00 3.10
544 549 4.906747 ATGCTCCTTCTCTCTCTTGTTT 57.093 40.909 0.00 0.00 0.00 2.83
545 550 4.264460 TGCTCCTTCTCTCTCTTGTTTC 57.736 45.455 0.00 0.00 0.00 2.78
579 584 7.981142 ACATTTTGTATGGGTGACTATAAACG 58.019 34.615 0.00 0.00 35.37 3.60
580 585 7.825270 ACATTTTGTATGGGTGACTATAAACGA 59.175 33.333 0.00 0.00 35.37 3.85
581 586 8.836413 CATTTTGTATGGGTGACTATAAACGAT 58.164 33.333 0.00 0.00 35.37 3.73
582 587 7.780008 TTTGTATGGGTGACTATAAACGATG 57.220 36.000 0.00 0.00 35.37 3.84
583 588 6.718522 TGTATGGGTGACTATAAACGATGA 57.281 37.500 0.00 0.00 35.37 2.92
584 589 6.509656 TGTATGGGTGACTATAAACGATGAC 58.490 40.000 0.00 0.00 35.37 3.06
585 590 5.871396 ATGGGTGACTATAAACGATGACT 57.129 39.130 0.00 0.00 0.00 3.41
586 591 6.971726 ATGGGTGACTATAAACGATGACTA 57.028 37.500 0.00 0.00 0.00 2.59
587 592 6.971726 TGGGTGACTATAAACGATGACTAT 57.028 37.500 0.00 0.00 0.00 2.12
588 593 8.645814 ATGGGTGACTATAAACGATGACTATA 57.354 34.615 0.00 0.00 0.00 1.31
589 594 7.879070 TGGGTGACTATAAACGATGACTATAC 58.121 38.462 0.00 0.00 0.00 1.47
590 595 7.503230 TGGGTGACTATAAACGATGACTATACA 59.497 37.037 0.00 0.00 0.00 2.29
591 596 7.806960 GGGTGACTATAAACGATGACTATACAC 59.193 40.741 0.00 0.00 0.00 2.90
632 637 9.243105 AGTTGATTGTACTATTTAACCATGCTT 57.757 29.630 11.68 0.00 0.00 3.91
647 652 5.890334 ACCATGCTTTTATACCAATCAACG 58.110 37.500 0.00 0.00 0.00 4.10
649 654 5.067153 CCATGCTTTTATACCAATCAACGGA 59.933 40.000 0.00 0.00 0.00 4.69
654 659 6.691388 GCTTTTATACCAATCAACGGACAATC 59.309 38.462 0.00 0.00 0.00 2.67
662 667 5.590259 CCAATCAACGGACAATCTAGGAAAT 59.410 40.000 0.00 0.00 0.00 2.17
664 669 4.430007 TCAACGGACAATCTAGGAAATCG 58.570 43.478 0.00 0.00 0.00 3.34
668 673 4.202030 ACGGACAATCTAGGAAATCGAGTC 60.202 45.833 0.00 0.00 0.00 3.36
717 722 8.755977 AGAAAACCTAGATCCGTCAAATACTTA 58.244 33.333 0.00 0.00 0.00 2.24
718 723 8.713737 AAAACCTAGATCCGTCAAATACTTAC 57.286 34.615 0.00 0.00 0.00 2.34
719 724 7.657023 AACCTAGATCCGTCAAATACTTACT 57.343 36.000 0.00 0.00 0.00 2.24
720 725 7.274603 ACCTAGATCCGTCAAATACTTACTC 57.725 40.000 0.00 0.00 0.00 2.59
721 726 6.264970 ACCTAGATCCGTCAAATACTTACTCC 59.735 42.308 0.00 0.00 0.00 3.85
722 727 6.490721 CCTAGATCCGTCAAATACTTACTCCT 59.509 42.308 0.00 0.00 0.00 3.69
723 728 7.664731 CCTAGATCCGTCAAATACTTACTCCTA 59.335 40.741 0.00 0.00 0.00 2.94
724 729 7.274603 AGATCCGTCAAATACTTACTCCTAC 57.725 40.000 0.00 0.00 0.00 3.18
725 730 7.061688 AGATCCGTCAAATACTTACTCCTACT 58.938 38.462 0.00 0.00 0.00 2.57
726 731 7.560626 AGATCCGTCAAATACTTACTCCTACTT 59.439 37.037 0.00 0.00 0.00 2.24
727 732 7.093322 TCCGTCAAATACTTACTCCTACTTC 57.907 40.000 0.00 0.00 0.00 3.01
728 733 6.888632 TCCGTCAAATACTTACTCCTACTTCT 59.111 38.462 0.00 0.00 0.00 2.85
789 794 0.034896 AAACTAGGCCTGGTGACGTG 59.965 55.000 24.00 1.26 0.00 4.49
842 847 1.859080 CGTGCGGCTTAGATAAACCTC 59.141 52.381 0.00 0.00 0.00 3.85
845 850 4.299978 GTGCGGCTTAGATAAACCTCTAG 58.700 47.826 0.00 0.00 0.00 2.43
907 913 1.680651 CAGTCCGAGTCTCAGGGCT 60.681 63.158 10.79 10.79 44.43 5.19
976 982 2.758327 CCACCTCACCGATCCCGA 60.758 66.667 0.00 0.00 38.22 5.14
1248 1254 1.079127 CACCCTCAACGGCTTCGAT 60.079 57.895 0.00 0.00 37.63 3.59
1331 1337 1.078848 ACTTCGAGATGCCAGGTGC 60.079 57.895 0.00 0.00 41.77 5.01
1359 1365 1.672356 CCTCCCTTTCTGTGTGCGG 60.672 63.158 0.00 0.00 0.00 5.69
1440 1468 1.675483 TGTGTTTGTGCAGTGGATGAC 59.325 47.619 0.00 0.00 0.00 3.06
1520 1548 7.011482 GGATCTCGCTTGTAAGTCAAATTATGT 59.989 37.037 0.00 0.00 35.48 2.29
1581 1610 5.931146 TGGAAGTTAATTTTACCGCGAGTTA 59.069 36.000 8.23 0.00 0.00 2.24
1597 1626 3.298317 GAGTTACATCTCGTATGGCGTC 58.702 50.000 5.69 0.00 42.13 5.19
1606 1635 0.173935 CGTATGGCGTCACCCAAGTA 59.826 55.000 0.00 0.00 38.61 2.24
1695 1725 7.060633 CAGTTGGATCAAATTTGCGTTTACTAC 59.939 37.037 13.54 6.23 0.00 2.73
1728 1758 3.163594 CGCGATCAAATTTCAGTTGGAC 58.836 45.455 0.00 0.00 0.00 4.02
1739 1769 3.350219 TCAGTTGGACCCTCAAATAGC 57.650 47.619 0.00 0.00 0.00 2.97
1774 1804 9.694520 GTTGTGCTATGCTTTATATGATTATCG 57.305 33.333 0.00 0.00 0.00 2.92
1804 1834 8.611654 AATTGATTATTGCCCTATTTCAATGC 57.388 30.769 0.00 0.00 34.95 3.56
1880 1910 5.332355 CGCTAGAAGGTTAACATGCGTAATC 60.332 44.000 12.72 0.00 37.80 1.75
1935 1967 2.729882 CGTTAGTGAGTCAAGTTTCCCG 59.270 50.000 0.00 0.00 0.00 5.14
2432 2470 2.754946 TGGGTAAGTTAGCACTTCCG 57.245 50.000 13.76 0.00 42.66 4.30
2442 2480 0.663153 AGCACTTCCGTTTCTGCAAC 59.337 50.000 0.00 0.00 31.71 4.17
2851 2998 6.978343 TGTGTAGACATATTTGCTGTAACC 57.022 37.500 0.00 0.00 0.00 2.85
3062 3235 2.232208 GGTCTTTTCCTCATTGCCTTGG 59.768 50.000 0.00 0.00 0.00 3.61
3245 3419 4.621983 GCAAAGTTTTGTAACCCACCTTGT 60.622 41.667 6.48 0.00 40.24 3.16
3325 3500 4.082679 ACGGTTACAAAACTTTGCAGTGAA 60.083 37.500 0.00 0.00 41.79 3.18
3572 3755 1.868713 ATTGGAATCCATGCCAAGCA 58.131 45.000 1.39 0.00 46.38 3.91
3597 3780 9.828039 CATATGTGGTGTGCAGATATAAGATAT 57.172 33.333 0.00 0.00 0.00 1.63
3695 3878 5.233476 CGTAGTTTCTGCTGTTCTGTGTTAA 59.767 40.000 0.00 0.00 0.00 2.01
3710 3893 7.595819 TCTGTGTTAAAGAAATTCCCACAAT 57.404 32.000 0.00 0.00 33.76 2.71
3722 3905 9.725019 AGAAATTCCCACAATTTAAATCCTTTC 57.275 29.630 0.10 3.42 30.68 2.62
3733 3916 5.950758 TTAAATCCTTTCGCTTGCAGTTA 57.049 34.783 0.00 0.00 0.00 2.24
3758 3944 7.979444 TTTTTCTAGTAATCAAGGTGGACAG 57.021 36.000 0.00 0.00 0.00 3.51
3785 3971 4.274459 CAGAGTAAGTGCAAAGCAAAGTCT 59.726 41.667 0.00 0.00 41.47 3.24
3904 4090 7.615039 ATGGGCAAATCATTTCCATTACATA 57.385 32.000 0.00 0.00 34.89 2.29
4034 4229 2.999355 GACACTTCTCACCAGAATCAGC 59.001 50.000 0.00 0.00 38.02 4.26
4073 4268 4.885426 CAGGCACACAGAACCTGT 57.115 55.556 0.00 0.00 46.51 4.00
4209 4404 6.205464 CAGACATCCTTCTTAGTTTTCAAGCA 59.795 38.462 0.00 0.00 0.00 3.91
4632 4827 6.070995 TCGTTGACAGATAAATGTAGGAGGTT 60.071 38.462 0.00 0.00 32.25 3.50
4673 4868 7.279750 ACCGTTAACATTAGAAATGGTTTGT 57.720 32.000 6.39 0.00 39.00 2.83
4809 5005 3.366374 GCTTTTAAGAGGTGCACATGGAC 60.366 47.826 20.43 0.00 35.50 4.02
5160 5356 2.970609 CGTTTTGTAATGCGGTTCACAG 59.029 45.455 0.00 0.00 0.00 3.66
5222 5418 3.499537 TGTTTCTGCTGCTGTAACTGATG 59.500 43.478 22.36 0.00 0.00 3.07
5333 5529 4.412528 AGTTTGTAAGTCCCCTCTGAACTT 59.587 41.667 0.00 0.00 37.10 2.66
5532 5728 1.410517 TCATCGACTGCTGATCCTTCC 59.589 52.381 0.00 0.00 0.00 3.46
5664 5864 3.003689 CGTGCAGGTCTTTTGAGAACAAT 59.996 43.478 0.00 0.00 35.85 2.71
5718 5918 3.636300 ACACCTAAGCTTGCAATTGTTCA 59.364 39.130 9.86 0.00 0.00 3.18
5976 6176 9.208169 CGTAGACTATTTAACTTTACTCGTCTG 57.792 37.037 0.00 0.00 32.22 3.51
6017 6218 4.879545 GTCATGGAGTAATAAAGGGCGAAA 59.120 41.667 0.00 0.00 0.00 3.46
6027 6228 3.934457 AAAGGGCGAAAGTGTATTTGG 57.066 42.857 0.00 0.00 0.00 3.28
6059 6260 3.616956 AGCTGCTTGTGACAATAGCTA 57.383 42.857 25.73 0.00 39.50 3.32
6083 6284 1.692519 GTTGTAGGGTGGTCTGTCAGT 59.307 52.381 0.00 0.00 0.00 3.41
6084 6285 2.895404 GTTGTAGGGTGGTCTGTCAGTA 59.105 50.000 0.00 0.00 0.00 2.74
6085 6286 2.803956 TGTAGGGTGGTCTGTCAGTAG 58.196 52.381 0.00 0.00 0.00 2.57
6087 6288 2.930109 AGGGTGGTCTGTCAGTAGAT 57.070 50.000 0.00 0.00 0.00 1.98
6088 6289 2.461695 AGGGTGGTCTGTCAGTAGATG 58.538 52.381 0.00 0.00 0.00 2.90
6129 6336 7.604549 TGTACATCTGACATCCGTTACTTTTA 58.395 34.615 0.00 0.00 0.00 1.52
6169 6376 6.749923 AGCAAAGATACTCATGAAAAGGAC 57.250 37.500 0.00 0.00 0.00 3.85
6252 6461 8.915036 TCTCATCTACTCCCTGTTCTTAAATAC 58.085 37.037 0.00 0.00 0.00 1.89
6289 6498 8.833231 AGAGATTTTAATATGGACCACATACG 57.167 34.615 0.00 0.00 44.41 3.06
6303 6512 6.183360 GGACCACATACGGATGTATATAGACC 60.183 46.154 14.23 6.34 44.82 3.85
6339 6553 3.686726 AGATTCACTCATTTTGCTCCGTC 59.313 43.478 0.00 0.00 0.00 4.79
6342 6556 2.146342 CACTCATTTTGCTCCGTCTGT 58.854 47.619 0.00 0.00 0.00 3.41
6346 6560 3.997021 CTCATTTTGCTCCGTCTGTAGTT 59.003 43.478 0.00 0.00 0.00 2.24
6347 6561 4.385825 TCATTTTGCTCCGTCTGTAGTTT 58.614 39.130 0.00 0.00 0.00 2.66
6348 6562 4.819630 TCATTTTGCTCCGTCTGTAGTTTT 59.180 37.500 0.00 0.00 0.00 2.43
6349 6563 5.298276 TCATTTTGCTCCGTCTGTAGTTTTT 59.702 36.000 0.00 0.00 0.00 1.94
6388 6602 2.363925 GGGGGCTCCGTCTGTAGT 60.364 66.667 0.00 0.00 0.00 2.73
6389 6603 1.988406 GGGGGCTCCGTCTGTAGTT 60.988 63.158 0.00 0.00 0.00 2.24
6397 6611 4.051922 GCTCCGTCTGTAGTTCATATTGG 58.948 47.826 0.00 0.00 0.00 3.16
6401 6615 6.884832 TCCGTCTGTAGTTCATATTGGAATT 58.115 36.000 0.00 0.00 0.00 2.17
6458 6677 1.134075 GCAGTGCGAGTGAATGCAG 59.866 57.895 0.00 0.00 42.68 4.41
6464 6683 1.532437 TGCGAGTGAATGCAGTTTCTG 59.468 47.619 0.00 0.00 35.90 3.02
6491 6732 6.674694 AGATGAAATGGATTCTTCTCAACG 57.325 37.500 1.94 0.00 44.80 4.10
6534 6775 1.004679 CGGGGCAGCTTTGCAATTT 60.005 52.632 0.00 0.00 36.33 1.82
6558 6799 0.796312 TTGACGCCGCAAGAAATCTC 59.204 50.000 0.00 0.00 43.02 2.75
6565 6806 2.006888 CCGCAAGAAATCTCGCCTTTA 58.993 47.619 0.00 0.00 43.02 1.85
6568 6809 4.272504 CCGCAAGAAATCTCGCCTTTAATA 59.727 41.667 0.00 0.00 43.02 0.98
6576 6817 9.457436 AGAAATCTCGCCTTTAATACCTTTTTA 57.543 29.630 0.00 0.00 0.00 1.52
6639 6887 3.299977 AAAGGCCCGGCGAAAACC 61.300 61.111 9.30 3.64 0.00 3.27
6685 6957 1.233285 CGAGGAAAGCTGCTGCAACT 61.233 55.000 18.42 0.68 42.74 3.16
6691 6963 4.731503 GCTGCTGCAACTGCGACG 62.732 66.667 11.11 0.00 45.83 5.12
6749 7021 0.463474 GCTCCTCCTGATGTTGAGCC 60.463 60.000 0.00 0.00 41.95 4.70
6751 7023 1.138661 CTCCTCCTGATGTTGAGCCTC 59.861 57.143 0.00 0.00 0.00 4.70
6752 7024 0.179936 CCTCCTGATGTTGAGCCTCC 59.820 60.000 0.00 0.00 0.00 4.30
6753 7025 0.179936 CTCCTGATGTTGAGCCTCCC 59.820 60.000 0.00 0.00 0.00 4.30
6754 7026 0.547471 TCCTGATGTTGAGCCTCCCA 60.547 55.000 0.00 0.00 0.00 4.37
6755 7027 0.107312 CCTGATGTTGAGCCTCCCAG 60.107 60.000 0.00 0.00 0.00 4.45
6764 7036 4.416738 GCCTCCCAGTCCCTGCAC 62.417 72.222 0.00 0.00 0.00 4.57
6846 7123 2.818130 TTTGGTGAGAAATGCAAGGC 57.182 45.000 0.00 0.00 0.00 4.35
6849 7126 0.529378 GGTGAGAAATGCAAGGCTGG 59.471 55.000 0.00 0.00 0.00 4.85
6852 7129 0.108945 GAGAAATGCAAGGCTGGTGC 60.109 55.000 4.21 4.21 42.55 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.176014 TCTGTCCTGATCTTCGATCTAGTA 57.824 41.667 5.55 0.00 0.00 1.82
2 3 6.384258 TTTCTGTCCTGATCTTCGATCTAG 57.616 41.667 5.55 0.00 0.00 2.43
3 4 6.775142 AGATTTCTGTCCTGATCTTCGATCTA 59.225 38.462 5.55 0.00 0.00 1.98
4 5 5.598005 AGATTTCTGTCCTGATCTTCGATCT 59.402 40.000 5.55 0.00 0.00 2.75
5 6 5.841810 AGATTTCTGTCCTGATCTTCGATC 58.158 41.667 0.00 0.00 0.00 3.69
6 7 5.507149 CGAGATTTCTGTCCTGATCTTCGAT 60.507 44.000 0.00 0.00 0.00 3.59
7 8 4.201960 CGAGATTTCTGTCCTGATCTTCGA 60.202 45.833 0.00 0.00 0.00 3.71
8 9 4.041049 CGAGATTTCTGTCCTGATCTTCG 58.959 47.826 0.00 0.00 0.00 3.79
9 10 5.255710 TCGAGATTTCTGTCCTGATCTTC 57.744 43.478 0.00 0.00 0.00 2.87
10 11 5.507149 CGATCGAGATTTCTGTCCTGATCTT 60.507 44.000 10.26 0.00 31.89 2.40
11 12 4.023279 CGATCGAGATTTCTGTCCTGATCT 60.023 45.833 10.26 0.00 31.89 2.75
12 13 4.023622 TCGATCGAGATTTCTGTCCTGATC 60.024 45.833 15.15 0.00 0.00 2.92
13 14 3.885901 TCGATCGAGATTTCTGTCCTGAT 59.114 43.478 15.15 0.00 0.00 2.90
14 15 3.279434 TCGATCGAGATTTCTGTCCTGA 58.721 45.455 15.15 0.00 0.00 3.86
15 16 3.699779 TCGATCGAGATTTCTGTCCTG 57.300 47.619 15.15 0.00 0.00 3.86
16 17 4.720649 TTTCGATCGAGATTTCTGTCCT 57.279 40.909 18.54 0.00 0.00 3.85
17 18 5.975410 ATTTTCGATCGAGATTTCTGTCC 57.025 39.130 18.54 0.00 0.00 4.02
18 19 7.942011 CGATTATTTTCGATCGAGATTTCTGTC 59.058 37.037 18.54 9.90 45.90 3.51
19 20 7.567771 GCGATTATTTTCGATCGAGATTTCTGT 60.568 37.037 18.54 2.06 45.90 3.41
20 21 6.729736 GCGATTATTTTCGATCGAGATTTCTG 59.270 38.462 18.54 7.56 45.90 3.02
21 22 6.399039 CGCGATTATTTTCGATCGAGATTTCT 60.399 38.462 18.54 3.55 45.90 2.52
22 23 5.719440 CGCGATTATTTTCGATCGAGATTTC 59.281 40.000 18.54 14.04 45.90 2.17
23 24 5.388475 CCGCGATTATTTTCGATCGAGATTT 60.388 40.000 18.54 7.31 45.90 2.17
24 25 4.090066 CCGCGATTATTTTCGATCGAGATT 59.910 41.667 18.54 12.56 45.90 2.40
25 26 3.608506 CCGCGATTATTTTCGATCGAGAT 59.391 43.478 18.54 17.51 45.90 2.75
26 27 2.977829 CCGCGATTATTTTCGATCGAGA 59.022 45.455 18.54 11.52 45.90 4.04
27 28 2.724690 ACCGCGATTATTTTCGATCGAG 59.275 45.455 18.54 5.15 45.90 4.04
28 29 2.734670 ACCGCGATTATTTTCGATCGA 58.265 42.857 15.15 15.15 45.90 3.59
29 30 3.499072 AACCGCGATTATTTTCGATCG 57.501 42.857 8.23 9.36 45.81 3.69
30 31 5.618395 GGTTTAACCGCGATTATTTTCGATC 59.382 40.000 8.23 0.00 41.62 3.69
31 32 5.504392 GGTTTAACCGCGATTATTTTCGAT 58.496 37.500 8.23 0.00 41.62 3.59
32 33 4.201802 GGGTTTAACCGCGATTATTTTCGA 60.202 41.667 8.23 0.00 39.26 3.71
33 34 4.030366 GGGTTTAACCGCGATTATTTTCG 58.970 43.478 8.23 0.00 39.83 3.46
34 35 5.032220 CAGGGTTTAACCGCGATTATTTTC 58.968 41.667 8.23 0.00 39.83 2.29
35 36 4.142337 CCAGGGTTTAACCGCGATTATTTT 60.142 41.667 8.23 0.00 39.83 1.82
36 37 3.379057 CCAGGGTTTAACCGCGATTATTT 59.621 43.478 8.23 0.00 39.83 1.40
37 38 2.946990 CCAGGGTTTAACCGCGATTATT 59.053 45.455 8.23 0.00 39.83 1.40
38 39 2.171027 TCCAGGGTTTAACCGCGATTAT 59.829 45.455 8.23 0.00 39.83 1.28
39 40 1.554160 TCCAGGGTTTAACCGCGATTA 59.446 47.619 8.23 0.00 39.83 1.75
40 41 0.325602 TCCAGGGTTTAACCGCGATT 59.674 50.000 8.23 0.00 39.83 3.34
41 42 0.325602 TTCCAGGGTTTAACCGCGAT 59.674 50.000 8.23 0.00 39.83 4.58
42 43 0.108207 TTTCCAGGGTTTAACCGCGA 59.892 50.000 8.23 0.42 39.83 5.87
43 44 0.953003 TTTTCCAGGGTTTAACCGCG 59.047 50.000 8.14 0.00 39.83 6.46
44 45 2.101082 TGTTTTTCCAGGGTTTAACCGC 59.899 45.455 8.14 1.43 39.83 5.68
45 46 4.388378 TTGTTTTTCCAGGGTTTAACCG 57.612 40.909 8.14 0.00 39.83 4.44
46 47 5.938710 TGTTTTGTTTTTCCAGGGTTTAACC 59.061 36.000 5.40 5.40 37.60 2.85
47 48 7.334671 TCATGTTTTGTTTTTCCAGGGTTTAAC 59.665 33.333 0.00 0.00 0.00 2.01
48 49 7.334671 GTCATGTTTTGTTTTTCCAGGGTTTAA 59.665 33.333 0.00 0.00 0.00 1.52
49 50 6.819146 GTCATGTTTTGTTTTTCCAGGGTTTA 59.181 34.615 0.00 0.00 0.00 2.01
50 51 5.645929 GTCATGTTTTGTTTTTCCAGGGTTT 59.354 36.000 0.00 0.00 0.00 3.27
51 52 5.182487 GTCATGTTTTGTTTTTCCAGGGTT 58.818 37.500 0.00 0.00 0.00 4.11
52 53 4.679372 CGTCATGTTTTGTTTTTCCAGGGT 60.679 41.667 0.00 0.00 0.00 4.34
53 54 3.801594 CGTCATGTTTTGTTTTTCCAGGG 59.198 43.478 0.00 0.00 0.00 4.45
54 55 4.677584 TCGTCATGTTTTGTTTTTCCAGG 58.322 39.130 0.00 0.00 0.00 4.45
55 56 5.574830 TGTTCGTCATGTTTTGTTTTTCCAG 59.425 36.000 0.00 0.00 0.00 3.86
56 57 5.470368 TGTTCGTCATGTTTTGTTTTTCCA 58.530 33.333 0.00 0.00 0.00 3.53
57 58 5.005299 CCTGTTCGTCATGTTTTGTTTTTCC 59.995 40.000 0.00 0.00 0.00 3.13
58 59 5.500131 GCCTGTTCGTCATGTTTTGTTTTTC 60.500 40.000 0.00 0.00 0.00 2.29
59 60 4.328712 GCCTGTTCGTCATGTTTTGTTTTT 59.671 37.500 0.00 0.00 0.00 1.94
60 61 3.862845 GCCTGTTCGTCATGTTTTGTTTT 59.137 39.130 0.00 0.00 0.00 2.43
61 62 3.130340 AGCCTGTTCGTCATGTTTTGTTT 59.870 39.130 0.00 0.00 0.00 2.83
62 63 2.687935 AGCCTGTTCGTCATGTTTTGTT 59.312 40.909 0.00 0.00 0.00 2.83
63 64 2.297701 AGCCTGTTCGTCATGTTTTGT 58.702 42.857 0.00 0.00 0.00 2.83
64 65 4.219033 GTTAGCCTGTTCGTCATGTTTTG 58.781 43.478 0.00 0.00 0.00 2.44
65 66 3.059188 CGTTAGCCTGTTCGTCATGTTTT 60.059 43.478 0.00 0.00 0.00 2.43
66 67 2.478894 CGTTAGCCTGTTCGTCATGTTT 59.521 45.455 0.00 0.00 0.00 2.83
67 68 2.066262 CGTTAGCCTGTTCGTCATGTT 58.934 47.619 0.00 0.00 0.00 2.71
68 69 1.271379 TCGTTAGCCTGTTCGTCATGT 59.729 47.619 0.00 0.00 0.00 3.21
69 70 1.990799 TCGTTAGCCTGTTCGTCATG 58.009 50.000 0.00 0.00 0.00 3.07
70 71 2.334838 GTTCGTTAGCCTGTTCGTCAT 58.665 47.619 0.00 0.00 0.00 3.06
71 72 1.774639 GTTCGTTAGCCTGTTCGTCA 58.225 50.000 0.00 0.00 0.00 4.35
72 73 0.706729 CGTTCGTTAGCCTGTTCGTC 59.293 55.000 0.00 0.00 0.00 4.20
73 74 0.311790 TCGTTCGTTAGCCTGTTCGT 59.688 50.000 0.00 0.00 0.00 3.85
74 75 1.411394 TTCGTTCGTTAGCCTGTTCG 58.589 50.000 0.00 0.00 0.00 3.95
75 76 2.735134 ACATTCGTTCGTTAGCCTGTTC 59.265 45.455 0.00 0.00 0.00 3.18
76 77 2.762745 ACATTCGTTCGTTAGCCTGTT 58.237 42.857 0.00 0.00 0.00 3.16
77 78 2.450609 ACATTCGTTCGTTAGCCTGT 57.549 45.000 0.00 0.00 0.00 4.00
78 79 3.369835 GAACATTCGTTCGTTAGCCTG 57.630 47.619 0.00 0.00 42.05 4.85
87 88 6.620747 GTCACAGACAGCGAACATTCGTTC 62.621 50.000 14.93 9.35 42.19 3.95
88 89 4.881886 GTCACAGACAGCGAACATTCGTT 61.882 47.826 14.93 6.72 44.93 3.85
89 90 3.427022 GTCACAGACAGCGAACATTCGT 61.427 50.000 14.93 0.36 41.33 3.85
90 91 1.125021 GTCACAGACAGCGAACATTCG 59.875 52.381 9.64 9.64 41.76 3.34
91 92 2.408050 AGTCACAGACAGCGAACATTC 58.592 47.619 0.00 0.00 34.60 2.67
92 93 2.533266 AGTCACAGACAGCGAACATT 57.467 45.000 0.00 0.00 34.60 2.71
93 94 3.318017 GTTAGTCACAGACAGCGAACAT 58.682 45.455 0.00 0.00 34.60 2.71
94 95 2.545113 GGTTAGTCACAGACAGCGAACA 60.545 50.000 0.00 0.00 34.60 3.18
95 96 2.059541 GGTTAGTCACAGACAGCGAAC 58.940 52.381 0.00 0.00 34.60 3.95
96 97 1.335597 CGGTTAGTCACAGACAGCGAA 60.336 52.381 0.00 0.00 33.48 4.70
97 98 0.240145 CGGTTAGTCACAGACAGCGA 59.760 55.000 0.00 0.00 33.48 4.93
98 99 0.240145 TCGGTTAGTCACAGACAGCG 59.760 55.000 0.00 1.90 34.60 5.18
99 100 1.699343 GTCGGTTAGTCACAGACAGC 58.301 55.000 3.25 0.00 46.67 4.40
102 103 2.287188 TGTTCGTCGGTTAGTCACAGAC 60.287 50.000 0.00 0.00 44.67 3.51
103 104 1.948834 TGTTCGTCGGTTAGTCACAGA 59.051 47.619 0.00 0.00 0.00 3.41
104 105 2.410785 TGTTCGTCGGTTAGTCACAG 57.589 50.000 0.00 0.00 0.00 3.66
105 106 2.867287 TTGTTCGTCGGTTAGTCACA 57.133 45.000 0.00 0.00 0.00 3.58
106 107 4.720530 ATTTTGTTCGTCGGTTAGTCAC 57.279 40.909 0.00 0.00 0.00 3.67
107 108 4.084952 CGAATTTTGTTCGTCGGTTAGTCA 60.085 41.667 2.29 0.00 37.18 3.41
108 109 4.380290 CGAATTTTGTTCGTCGGTTAGTC 58.620 43.478 2.29 0.00 37.18 2.59
109 110 4.379374 CGAATTTTGTTCGTCGGTTAGT 57.621 40.909 2.29 0.00 37.18 2.24
130 131 2.208834 CGCTCGTTCGTTCGTTTTAAC 58.791 47.619 2.67 0.00 0.00 2.01
131 132 1.189884 CCGCTCGTTCGTTCGTTTTAA 59.810 47.619 2.67 0.00 0.00 1.52
132 133 0.777631 CCGCTCGTTCGTTCGTTTTA 59.222 50.000 2.67 0.00 0.00 1.52
133 134 1.561250 CCGCTCGTTCGTTCGTTTT 59.439 52.632 2.67 0.00 0.00 2.43
134 135 2.305127 CCCGCTCGTTCGTTCGTTT 61.305 57.895 2.67 0.00 0.00 3.60
135 136 2.732094 CCCGCTCGTTCGTTCGTT 60.732 61.111 2.67 0.00 0.00 3.85
149 150 0.874607 AGTTATTTAGCGAGCGCCCG 60.875 55.000 7.06 7.06 43.17 6.13
150 151 2.144482 TAGTTATTTAGCGAGCGCCC 57.856 50.000 11.66 0.00 43.17 6.13
151 152 3.302935 GGTTTAGTTATTTAGCGAGCGCC 60.303 47.826 11.66 0.00 43.17 6.53
152 153 3.600909 CGGTTTAGTTATTTAGCGAGCGC 60.601 47.826 6.78 6.78 42.33 5.92
153 154 3.792956 TCGGTTTAGTTATTTAGCGAGCG 59.207 43.478 0.00 0.00 35.85 5.03
154 155 5.707411 TTCGGTTTAGTTATTTAGCGAGC 57.293 39.130 0.00 0.00 40.86 5.03
176 177 8.859517 TTTTCAAAATAGATCGGTTCGTTTTT 57.140 26.923 0.00 1.76 30.00 1.94
177 178 9.124807 GATTTTCAAAATAGATCGGTTCGTTTT 57.875 29.630 0.00 0.00 31.50 2.43
178 179 8.512138 AGATTTTCAAAATAGATCGGTTCGTTT 58.488 29.630 0.00 0.00 0.00 3.60
179 180 7.962918 CAGATTTTCAAAATAGATCGGTTCGTT 59.037 33.333 0.00 0.00 0.00 3.85
180 181 7.414098 CCAGATTTTCAAAATAGATCGGTTCGT 60.414 37.037 0.00 0.00 0.00 3.85
181 182 6.907212 CCAGATTTTCAAAATAGATCGGTTCG 59.093 38.462 0.00 0.00 0.00 3.95
182 183 7.067008 TCCCAGATTTTCAAAATAGATCGGTTC 59.933 37.037 0.00 0.00 0.00 3.62
183 184 6.889722 TCCCAGATTTTCAAAATAGATCGGTT 59.110 34.615 0.00 0.00 0.00 4.44
184 185 6.423182 TCCCAGATTTTCAAAATAGATCGGT 58.577 36.000 0.00 0.00 0.00 4.69
185 186 6.942532 TCCCAGATTTTCAAAATAGATCGG 57.057 37.500 0.00 0.00 0.00 4.18
186 187 7.934457 ACATCCCAGATTTTCAAAATAGATCG 58.066 34.615 0.00 0.00 0.00 3.69
189 190 9.527157 TGTAACATCCCAGATTTTCAAAATAGA 57.473 29.630 0.00 0.00 0.00 1.98
192 193 9.439500 CATTGTAACATCCCAGATTTTCAAAAT 57.561 29.630 0.00 0.00 0.00 1.82
193 194 8.646004 TCATTGTAACATCCCAGATTTTCAAAA 58.354 29.630 0.00 0.00 0.00 2.44
194 195 8.187913 TCATTGTAACATCCCAGATTTTCAAA 57.812 30.769 0.00 0.00 0.00 2.69
195 196 7.773489 TCATTGTAACATCCCAGATTTTCAA 57.227 32.000 0.00 0.00 0.00 2.69
196 197 7.614974 TCATCATTGTAACATCCCAGATTTTCA 59.385 33.333 0.00 0.00 0.00 2.69
197 198 7.999679 TCATCATTGTAACATCCCAGATTTTC 58.000 34.615 0.00 0.00 0.00 2.29
198 199 7.959658 TCATCATTGTAACATCCCAGATTTT 57.040 32.000 0.00 0.00 0.00 1.82
199 200 7.147846 GGTTCATCATTGTAACATCCCAGATTT 60.148 37.037 0.00 0.00 0.00 2.17
200 201 6.322201 GGTTCATCATTGTAACATCCCAGATT 59.678 38.462 0.00 0.00 0.00 2.40
201 202 5.829924 GGTTCATCATTGTAACATCCCAGAT 59.170 40.000 0.00 0.00 0.00 2.90
202 203 5.044919 AGGTTCATCATTGTAACATCCCAGA 60.045 40.000 0.00 0.00 0.00 3.86
203 204 5.195940 AGGTTCATCATTGTAACATCCCAG 58.804 41.667 0.00 0.00 0.00 4.45
204 205 5.044919 AGAGGTTCATCATTGTAACATCCCA 60.045 40.000 0.00 0.00 35.19 4.37
205 206 5.440610 AGAGGTTCATCATTGTAACATCCC 58.559 41.667 0.00 0.00 35.19 3.85
206 207 6.203723 GCTAGAGGTTCATCATTGTAACATCC 59.796 42.308 0.00 0.00 35.19 3.51
207 208 6.763135 TGCTAGAGGTTCATCATTGTAACATC 59.237 38.462 0.00 0.00 34.92 3.06
208 209 6.540189 GTGCTAGAGGTTCATCATTGTAACAT 59.460 38.462 0.00 0.00 0.00 2.71
209 210 5.874810 GTGCTAGAGGTTCATCATTGTAACA 59.125 40.000 0.00 0.00 0.00 2.41
210 211 5.005779 CGTGCTAGAGGTTCATCATTGTAAC 59.994 44.000 0.00 0.00 0.00 2.50
211 212 5.109210 CGTGCTAGAGGTTCATCATTGTAA 58.891 41.667 0.00 0.00 0.00 2.41
212 213 4.159693 ACGTGCTAGAGGTTCATCATTGTA 59.840 41.667 0.00 0.00 0.00 2.41
213 214 3.055819 ACGTGCTAGAGGTTCATCATTGT 60.056 43.478 0.00 0.00 0.00 2.71
214 215 3.525537 ACGTGCTAGAGGTTCATCATTG 58.474 45.455 0.00 0.00 0.00 2.82
215 216 3.895232 ACGTGCTAGAGGTTCATCATT 57.105 42.857 0.00 0.00 0.00 2.57
216 217 3.525537 CAACGTGCTAGAGGTTCATCAT 58.474 45.455 0.00 0.00 30.06 2.45
217 218 2.930887 GCAACGTGCTAGAGGTTCATCA 60.931 50.000 0.00 0.00 40.96 3.07
218 219 1.661112 GCAACGTGCTAGAGGTTCATC 59.339 52.381 0.00 0.00 40.96 2.92
219 220 1.676014 GGCAACGTGCTAGAGGTTCAT 60.676 52.381 9.31 0.00 44.28 2.57
220 221 0.320421 GGCAACGTGCTAGAGGTTCA 60.320 55.000 9.31 0.00 44.28 3.18
221 222 1.019805 GGGCAACGTGCTAGAGGTTC 61.020 60.000 9.31 0.00 44.28 3.62
222 223 1.003718 GGGCAACGTGCTAGAGGTT 60.004 57.895 9.31 0.00 44.28 3.50
223 224 2.172483 CTGGGCAACGTGCTAGAGGT 62.172 60.000 9.31 0.00 44.28 3.85
224 225 1.448540 CTGGGCAACGTGCTAGAGG 60.449 63.158 9.31 0.00 44.28 3.69
225 226 2.103042 GCTGGGCAACGTGCTAGAG 61.103 63.158 9.31 5.13 44.28 2.43
226 227 2.047274 GCTGGGCAACGTGCTAGA 60.047 61.111 9.31 0.00 44.28 2.43
227 228 3.490759 CGCTGGGCAACGTGCTAG 61.491 66.667 9.31 9.08 44.28 3.42
237 238 3.181290 GAATTTTGCGCGCTGGGC 61.181 61.111 33.29 12.76 41.94 5.36
238 239 2.506881 GGAATTTTGCGCGCTGGG 60.507 61.111 33.29 0.00 0.00 4.45
239 240 1.802715 CTGGAATTTTGCGCGCTGG 60.803 57.895 33.29 7.43 0.00 4.85
240 241 2.438954 GCTGGAATTTTGCGCGCTG 61.439 57.895 33.29 11.22 0.00 5.18
241 242 1.305219 TAGCTGGAATTTTGCGCGCT 61.305 50.000 33.29 11.86 33.81 5.92
242 243 0.863119 CTAGCTGGAATTTTGCGCGC 60.863 55.000 27.26 27.26 0.00 6.86
243 244 0.726827 TCTAGCTGGAATTTTGCGCG 59.273 50.000 0.00 0.00 0.00 6.86
244 245 1.202188 GGTCTAGCTGGAATTTTGCGC 60.202 52.381 0.00 0.00 0.00 6.09
245 246 1.401905 GGGTCTAGCTGGAATTTTGCG 59.598 52.381 0.00 0.00 0.00 4.85
246 247 2.424956 CTGGGTCTAGCTGGAATTTTGC 59.575 50.000 0.00 0.00 0.00 3.68
247 248 3.690460 ACTGGGTCTAGCTGGAATTTTG 58.310 45.455 0.00 0.00 0.00 2.44
248 249 4.082125 CAACTGGGTCTAGCTGGAATTTT 58.918 43.478 0.00 0.00 0.00 1.82
249 250 3.074538 ACAACTGGGTCTAGCTGGAATTT 59.925 43.478 0.00 0.00 0.00 1.82
250 251 2.644798 ACAACTGGGTCTAGCTGGAATT 59.355 45.455 0.00 0.00 0.00 2.17
251 252 2.237392 GACAACTGGGTCTAGCTGGAAT 59.763 50.000 0.00 0.00 34.92 3.01
252 253 1.623811 GACAACTGGGTCTAGCTGGAA 59.376 52.381 0.00 0.00 34.92 3.53
253 254 1.267121 GACAACTGGGTCTAGCTGGA 58.733 55.000 0.00 0.00 34.92 3.86
254 255 0.108615 CGACAACTGGGTCTAGCTGG 60.109 60.000 0.00 0.00 35.63 4.85
255 256 0.108615 CCGACAACTGGGTCTAGCTG 60.109 60.000 0.00 0.00 35.63 4.24
256 257 1.889530 GCCGACAACTGGGTCTAGCT 61.890 60.000 0.00 0.00 35.63 3.32
257 258 1.448013 GCCGACAACTGGGTCTAGC 60.448 63.158 0.00 0.00 35.63 3.42
258 259 1.153823 CGCCGACAACTGGGTCTAG 60.154 63.158 0.00 0.00 35.63 2.43
259 260 1.870055 GACGCCGACAACTGGGTCTA 61.870 60.000 0.00 0.00 39.03 2.59
260 261 3.222354 GACGCCGACAACTGGGTCT 62.222 63.158 0.00 0.00 39.03 3.85
261 262 2.710724 AAGACGCCGACAACTGGGTC 62.711 60.000 0.00 0.00 41.06 4.46
262 263 2.803817 AAGACGCCGACAACTGGGT 61.804 57.895 0.00 0.00 0.00 4.51
263 264 2.030562 AAGACGCCGACAACTGGG 59.969 61.111 0.00 0.00 0.00 4.45
264 265 2.954753 GCAAGACGCCGACAACTGG 61.955 63.158 0.00 0.00 32.94 4.00
265 266 2.551270 GCAAGACGCCGACAACTG 59.449 61.111 0.00 0.00 32.94 3.16
291 292 2.472414 TATTGCGACCGGGCCAACTT 62.472 55.000 12.71 2.29 0.00 2.66
292 293 2.869503 CTATTGCGACCGGGCCAACT 62.870 60.000 12.71 6.16 0.00 3.16
293 294 2.437002 TATTGCGACCGGGCCAAC 60.437 61.111 12.71 0.00 0.00 3.77
294 295 2.124901 CTATTGCGACCGGGCCAA 60.125 61.111 12.81 12.81 0.00 4.52
295 296 4.169696 CCTATTGCGACCGGGCCA 62.170 66.667 6.32 0.00 0.00 5.36
296 297 3.692370 AACCTATTGCGACCGGGCC 62.692 63.158 6.32 0.00 0.00 5.80
297 298 2.124860 AACCTATTGCGACCGGGC 60.125 61.111 6.32 0.00 0.00 6.13
298 299 1.817941 CCAACCTATTGCGACCGGG 60.818 63.158 6.32 0.00 34.17 5.73
299 300 1.817941 CCCAACCTATTGCGACCGG 60.818 63.158 0.00 0.00 34.17 5.28
300 301 2.469516 GCCCAACCTATTGCGACCG 61.470 63.158 0.00 0.00 34.17 4.79
301 302 3.509659 GCCCAACCTATTGCGACC 58.490 61.111 0.00 0.00 34.17 4.79
305 306 1.360192 GCATCGCCCAACCTATTGC 59.640 57.895 0.00 0.00 34.17 3.56
306 307 1.321474 ATGCATCGCCCAACCTATTG 58.679 50.000 0.00 0.00 35.40 1.90
307 308 2.071778 AATGCATCGCCCAACCTATT 57.928 45.000 0.00 0.00 0.00 1.73
308 309 2.071778 AAATGCATCGCCCAACCTAT 57.928 45.000 0.00 0.00 0.00 2.57
309 310 1.846007 AAAATGCATCGCCCAACCTA 58.154 45.000 0.00 0.00 0.00 3.08
310 311 0.975887 AAAAATGCATCGCCCAACCT 59.024 45.000 0.00 0.00 0.00 3.50
311 312 1.066929 AGAAAAATGCATCGCCCAACC 60.067 47.619 0.00 0.00 0.00 3.77
312 313 1.994779 CAGAAAAATGCATCGCCCAAC 59.005 47.619 0.00 0.00 0.00 3.77
313 314 1.067000 CCAGAAAAATGCATCGCCCAA 60.067 47.619 0.00 0.00 0.00 4.12
314 315 0.531657 CCAGAAAAATGCATCGCCCA 59.468 50.000 0.00 0.00 0.00 5.36
315 316 0.179103 CCCAGAAAAATGCATCGCCC 60.179 55.000 0.00 0.00 0.00 6.13
329 330 1.295423 GGCGTGCTAAAGACCCAGA 59.705 57.895 0.00 0.00 0.00 3.86
331 332 2.349755 GGGCGTGCTAAAGACCCA 59.650 61.111 0.00 0.00 40.52 4.51
347 348 1.010795 AAGGGGGAGGAGATTTTGGG 58.989 55.000 0.00 0.00 0.00 4.12
360 361 0.846693 CACCATTAGGAGGAAGGGGG 59.153 60.000 0.00 0.00 34.49 5.40
388 389 2.026449 AGTTGATGGCCTTTCCTCAGAG 60.026 50.000 3.32 0.00 35.26 3.35
389 390 1.988107 AGTTGATGGCCTTTCCTCAGA 59.012 47.619 3.32 0.00 35.26 3.27
390 391 2.503895 AGTTGATGGCCTTTCCTCAG 57.496 50.000 3.32 0.00 35.26 3.35
391 392 3.523157 TCATAGTTGATGGCCTTTCCTCA 59.477 43.478 3.32 0.00 36.08 3.86
392 393 4.156455 TCATAGTTGATGGCCTTTCCTC 57.844 45.455 3.32 0.00 36.08 3.71
414 415 2.061220 CTGGTCTCTCCAACAGGCA 58.939 57.895 0.00 0.00 46.59 4.75
425 430 3.304251 GGAGGGACTGCTGGTCTC 58.696 66.667 9.50 6.32 45.87 3.36
451 456 1.070786 GCGCCCGGATTTATGAGGA 59.929 57.895 0.73 0.00 0.00 3.71
455 460 1.507141 GGTGAGCGCCCGGATTTATG 61.507 60.000 0.73 0.00 0.00 1.90
456 461 1.227853 GGTGAGCGCCCGGATTTAT 60.228 57.895 0.73 0.00 0.00 1.40
477 482 0.035439 AGGTGTTATGGCGGAGGTTG 60.035 55.000 0.00 0.00 0.00 3.77
489 494 1.593196 GCTCACAACTGCAGGTGTTA 58.407 50.000 34.43 25.59 36.43 2.41
493 498 1.301244 CTCGCTCACAACTGCAGGT 60.301 57.895 19.93 9.19 0.00 4.00
495 500 2.858868 GCTCGCTCACAACTGCAG 59.141 61.111 13.48 13.48 0.00 4.41
502 507 1.372499 GTGGTAACGCTCGCTCACA 60.372 57.895 0.00 0.00 46.04 3.58
515 520 4.873010 AGAGAGAAGGAGCATTAGTGGTA 58.127 43.478 0.00 0.00 35.91 3.25
518 523 5.105392 ACAAGAGAGAGAAGGAGCATTAGTG 60.105 44.000 0.00 0.00 0.00 2.74
520 525 5.596836 ACAAGAGAGAGAAGGAGCATTAG 57.403 43.478 0.00 0.00 0.00 1.73
521 526 6.212388 AGAAACAAGAGAGAGAAGGAGCATTA 59.788 38.462 0.00 0.00 0.00 1.90
556 561 8.836413 CATCGTTTATAGTCACCCATACAAAAT 58.164 33.333 0.00 0.00 0.00 1.82
566 571 8.347771 TGTGTATAGTCATCGTTTATAGTCACC 58.652 37.037 0.00 0.00 0.00 4.02
575 580 9.594478 TTGACATATTGTGTATAGTCATCGTTT 57.406 29.630 0.00 0.00 42.36 3.60
576 581 9.031360 GTTGACATATTGTGTATAGTCATCGTT 57.969 33.333 0.00 0.00 42.36 3.85
577 582 8.194769 TGTTGACATATTGTGTATAGTCATCGT 58.805 33.333 0.00 0.00 42.36 3.73
578 583 8.574196 TGTTGACATATTGTGTATAGTCATCG 57.426 34.615 0.00 0.00 42.36 3.84
581 586 9.533253 CTGATGTTGACATATTGTGTATAGTCA 57.467 33.333 0.00 0.00 42.36 3.41
582 587 9.534565 ACTGATGTTGACATATTGTGTATAGTC 57.465 33.333 0.00 0.00 42.36 2.59
583 588 9.890629 AACTGATGTTGACATATTGTGTATAGT 57.109 29.630 0.00 0.00 42.36 2.12
622 627 7.415765 CCGTTGATTGGTATAAAAGCATGGTTA 60.416 37.037 11.15 0.00 35.03 2.85
629 634 5.554822 TGTCCGTTGATTGGTATAAAAGC 57.445 39.130 0.00 0.00 0.00 3.51
632 637 7.713507 CCTAGATTGTCCGTTGATTGGTATAAA 59.286 37.037 0.00 0.00 0.00 1.40
644 649 4.159879 ACTCGATTTCCTAGATTGTCCGTT 59.840 41.667 0.00 0.00 0.00 4.44
645 650 3.700038 ACTCGATTTCCTAGATTGTCCGT 59.300 43.478 0.00 0.00 0.00 4.69
647 652 4.036498 TCGACTCGATTTCCTAGATTGTCC 59.964 45.833 0.00 0.00 0.00 4.02
649 654 4.641094 ACTCGACTCGATTTCCTAGATTGT 59.359 41.667 0.62 0.00 34.61 2.71
654 659 4.449743 CCTAGACTCGACTCGATTTCCTAG 59.550 50.000 0.62 9.61 34.61 3.02
662 667 0.464870 CCCTCCTAGACTCGACTCGA 59.535 60.000 0.29 0.29 0.00 4.04
664 669 0.107116 TGCCCTCCTAGACTCGACTC 60.107 60.000 0.00 0.00 0.00 3.36
668 673 0.895530 TTTGTGCCCTCCTAGACTCG 59.104 55.000 0.00 0.00 0.00 4.18
717 722 6.836527 AGCAATATACACTGAGAAGTAGGAGT 59.163 38.462 0.00 0.00 0.00 3.85
718 723 7.283625 AGCAATATACACTGAGAAGTAGGAG 57.716 40.000 0.00 0.00 0.00 3.69
719 724 7.661536 AAGCAATATACACTGAGAAGTAGGA 57.338 36.000 0.00 0.00 0.00 2.94
720 725 7.439655 GGAAAGCAATATACACTGAGAAGTAGG 59.560 40.741 0.00 0.00 0.00 3.18
721 726 7.981789 TGGAAAGCAATATACACTGAGAAGTAG 59.018 37.037 0.00 0.00 0.00 2.57
722 727 7.847096 TGGAAAGCAATATACACTGAGAAGTA 58.153 34.615 0.00 0.00 0.00 2.24
723 728 6.711277 TGGAAAGCAATATACACTGAGAAGT 58.289 36.000 0.00 0.00 0.00 3.01
724 729 7.798596 ATGGAAAGCAATATACACTGAGAAG 57.201 36.000 0.00 0.00 0.00 2.85
725 730 8.579850 AAATGGAAAGCAATATACACTGAGAA 57.420 30.769 0.00 0.00 0.00 2.87
726 731 7.011389 CGAAATGGAAAGCAATATACACTGAGA 59.989 37.037 0.00 0.00 0.00 3.27
727 732 7.128331 CGAAATGGAAAGCAATATACACTGAG 58.872 38.462 0.00 0.00 0.00 3.35
728 733 6.597672 ACGAAATGGAAAGCAATATACACTGA 59.402 34.615 0.00 0.00 0.00 3.41
738 743 4.815040 TCGTTTACGAAATGGAAAGCAA 57.185 36.364 1.95 0.00 46.30 3.91
760 765 0.738762 GGCCTAGTTTCGGACGGAAC 60.739 60.000 7.77 7.77 33.42 3.62
789 794 1.334329 CGGTCGTGCTGGGTTTAAAAC 60.334 52.381 0.00 0.00 0.00 2.43
842 847 2.621000 GCGTTTCGCGATGGCTAG 59.379 61.111 10.88 0.00 44.55 3.42
907 913 0.170339 CGCCACGATCTGACACACTA 59.830 55.000 0.00 0.00 0.00 2.74
1339 1345 2.328099 GCACACAGAAAGGGAGGCG 61.328 63.158 0.00 0.00 0.00 5.52
1440 1468 4.758251 TCACCTGCACCATCCGCG 62.758 66.667 0.00 0.00 0.00 6.46
1597 1626 2.304761 TCTAGGTGGCTTTACTTGGGTG 59.695 50.000 0.00 0.00 0.00 4.61
1606 1635 2.639839 TGCTTCTCTTCTAGGTGGCTTT 59.360 45.455 0.00 0.00 0.00 3.51
1654 1684 7.568349 TGATCCAACTGAAATTGAGCTATACT 58.432 34.615 0.00 0.00 0.00 2.12
1695 1725 1.926561 TGATCGCGGAACATGAAGAG 58.073 50.000 6.13 0.00 0.00 2.85
1728 1758 2.092212 ACCATGACAGGCTATTTGAGGG 60.092 50.000 0.00 0.00 0.00 4.30
1739 1769 1.402968 GCATAGCACAACCATGACAGG 59.597 52.381 0.00 0.00 0.00 4.00
1795 1825 4.410099 TCAGAACCTGAAGGCATTGAAAT 58.590 39.130 0.00 0.00 37.57 2.17
1854 1884 1.330829 GCATGTTAACCTTCTAGCGCC 59.669 52.381 2.29 0.00 0.00 6.53
1906 1936 1.679153 TGACTCACTAACGACACAGCA 59.321 47.619 0.00 0.00 0.00 4.41
1935 1967 7.010460 CACAGAGAAAACCCAATTGAGAAAAAC 59.990 37.037 7.12 0.00 0.00 2.43
2102 2134 0.685458 GGCATGGCATCTTCAAGGGT 60.685 55.000 15.47 0.00 0.00 4.34
2432 2470 7.909267 AGAAGCATTTTAAAAGTTGCAGAAAC 58.091 30.769 22.20 11.72 37.56 2.78
2442 2480 7.809806 CCTACCTGACAAGAAGCATTTTAAAAG 59.190 37.037 6.79 0.60 0.00 2.27
3062 3235 5.497273 GCGATATCTGTTCAGAAGAAAAGC 58.503 41.667 6.60 5.04 38.71 3.51
3245 3419 0.396435 CCTAACAGGTCAGTGGCACA 59.604 55.000 21.41 0.00 0.00 4.57
3710 3893 4.846779 ACTGCAAGCGAAAGGATTTAAA 57.153 36.364 0.00 0.00 35.92 1.52
3722 3905 8.175069 TGATTACTAGAAAAATAACTGCAAGCG 58.825 33.333 0.00 0.00 37.60 4.68
3733 3916 8.383175 TCTGTCCACCTTGATTACTAGAAAAAT 58.617 33.333 0.00 0.00 0.00 1.82
3758 3944 4.552166 TGCTTTGCACTTACTCTGTTTC 57.448 40.909 0.00 0.00 31.71 2.78
3785 3971 7.669722 AGATAAGGGTTTGAGCATTTAGACAAA 59.330 33.333 0.00 0.00 0.00 2.83
3794 3980 5.128919 GTCATGAGATAAGGGTTTGAGCAT 58.871 41.667 0.00 0.00 0.00 3.79
4034 4229 9.599322 GCCTGTAAATATCGAAAATCACATTAG 57.401 33.333 0.00 0.00 0.00 1.73
4073 4268 4.814234 ACTGAAAAGCGATCTGTACAACAA 59.186 37.500 0.00 0.00 0.00 2.83
4209 4404 5.358160 GTGAGGCATCCAAAAGCTAGTTAAT 59.642 40.000 0.00 0.00 0.00 1.40
4647 4842 8.848182 ACAAACCATTTCTAATGTTAACGGTAA 58.152 29.630 0.26 0.00 0.00 2.85
4673 4868 4.085733 CCACACAGAATTAACCCAATGGA 58.914 43.478 0.00 0.00 34.81 3.41
5333 5529 1.888215 CTCCAGTGAGCTGCAAGAAA 58.112 50.000 1.02 0.00 41.26 2.52
5532 5728 0.039764 GGGGTGGAGGAAAAGGAAGG 59.960 60.000 0.00 0.00 0.00 3.46
5602 5802 2.472695 AATAAGCGTTGAGACAGGCA 57.527 45.000 0.00 0.00 0.00 4.75
5613 5813 8.690680 TTTTTAGTTGTCAACAAAATAAGCGT 57.309 26.923 17.78 0.00 37.63 5.07
5664 5864 3.126858 GTCCTGCTTCAACGCATTAATCA 59.873 43.478 0.00 0.00 39.52 2.57
5718 5918 3.497405 CGATGAATCATCTTGTCCCCCAT 60.497 47.826 19.62 0.00 38.59 4.00
5767 5967 2.436417 CCGGAACCATCAACATCTTGT 58.564 47.619 0.00 0.00 0.00 3.16
5826 6026 7.093377 GGATCTCTGCTACTTCATTCCTGATAT 60.093 40.741 0.00 0.00 0.00 1.63
5885 6085 1.353022 TCGGAACCAAAAGCCCATAGT 59.647 47.619 0.00 0.00 0.00 2.12
5896 6096 2.901192 TCTACACCATCTTCGGAACCAA 59.099 45.455 0.00 0.00 0.00 3.67
6017 6218 9.547753 CAGCTACTTGTAATATCCAAATACACT 57.452 33.333 0.00 0.00 29.78 3.55
6059 6260 3.137544 TGACAGACCACCCTACAACATTT 59.862 43.478 0.00 0.00 0.00 2.32
6083 6284 9.901172 TGTACAGTACATAGAAGAACTCATCTA 57.099 33.333 9.51 0.00 33.23 1.98
6084 6285 8.809468 TGTACAGTACATAGAAGAACTCATCT 57.191 34.615 9.51 0.00 34.95 2.90
6129 6336 7.676683 TCTTTGCTACTATCAGGATAAGGTT 57.323 36.000 0.00 0.00 0.00 3.50
6169 6376 6.591448 TGTATTACTCTGAAACTCATGTGCTG 59.409 38.462 0.00 0.00 0.00 4.41
6272 6481 7.727578 ATACATCCGTATGTGGTCCATATTA 57.272 36.000 6.41 0.00 45.99 0.98
6279 6488 6.602406 AGGTCTATATACATCCGTATGTGGTC 59.398 42.308 3.56 0.00 45.99 4.02
6282 6491 8.734218 ACTAGGTCTATATACATCCGTATGTG 57.266 38.462 3.56 0.00 45.99 3.21
6322 6536 2.146342 ACAGACGGAGCAAAATGAGTG 58.854 47.619 0.00 0.00 0.00 3.51
6371 6585 1.957765 GAACTACAGACGGAGCCCCC 61.958 65.000 0.00 0.00 0.00 5.40
6372 6586 1.255667 TGAACTACAGACGGAGCCCC 61.256 60.000 0.00 0.00 0.00 5.80
6373 6587 0.824759 ATGAACTACAGACGGAGCCC 59.175 55.000 0.00 0.00 0.00 5.19
6374 6588 4.051922 CAATATGAACTACAGACGGAGCC 58.948 47.826 0.00 0.00 0.00 4.70
6375 6589 4.051922 CCAATATGAACTACAGACGGAGC 58.948 47.826 0.00 0.00 0.00 4.70
6376 6590 5.515797 TCCAATATGAACTACAGACGGAG 57.484 43.478 0.00 0.00 0.00 4.63
6377 6591 5.925506 TTCCAATATGAACTACAGACGGA 57.074 39.130 0.00 0.00 0.00 4.69
6378 6592 7.495934 AGAAATTCCAATATGAACTACAGACGG 59.504 37.037 0.00 0.00 0.00 4.79
6379 6593 8.425577 AGAAATTCCAATATGAACTACAGACG 57.574 34.615 0.00 0.00 0.00 4.18
6386 6600 9.875691 GCCTTTTTAGAAATTCCAATATGAACT 57.124 29.630 0.00 0.00 0.00 3.01
6387 6601 9.875691 AGCCTTTTTAGAAATTCCAATATGAAC 57.124 29.630 0.00 0.00 0.00 3.18
6401 6615 8.463607 CGTTCCCAAATATAAGCCTTTTTAGAA 58.536 33.333 0.00 0.00 0.00 2.10
6411 6625 4.065789 CTCCCTCGTTCCCAAATATAAGC 58.934 47.826 0.00 0.00 0.00 3.09
6421 6635 1.340568 GCTACATACTCCCTCGTTCCC 59.659 57.143 0.00 0.00 0.00 3.97
6458 6677 3.968265 TCCATTTCATCTCCCCAGAAAC 58.032 45.455 0.00 0.00 34.47 2.78
6464 6683 5.059134 AGAAGAATCCATTTCATCTCCCC 57.941 43.478 0.00 0.00 37.77 4.81
6491 6732 6.621316 TCTACCATCGTCTCAAGAATCTAC 57.379 41.667 0.00 0.00 0.00 2.59
6534 6775 3.824621 TCTTGCGGCGTCAAGAATA 57.175 47.368 30.29 16.88 46.56 1.75
6594 6842 8.477419 AAAGACCCATCTGTATTTTTCTTTGA 57.523 30.769 0.00 0.00 34.48 2.69
6639 6887 1.086696 AAAGCGTTGATGATCACCGG 58.913 50.000 14.07 0.00 32.73 5.28
6640 6888 2.900122 AAAAGCGTTGATGATCACCG 57.100 45.000 8.06 8.06 35.32 4.94
6691 6963 2.991540 GTTGCAGGAGGGGTTGCC 60.992 66.667 0.00 0.00 0.00 4.52
6754 7026 2.069165 GAAAGGTGGGTGCAGGGACT 62.069 60.000 0.00 0.00 43.88 3.85
6755 7027 1.603739 GAAAGGTGGGTGCAGGGAC 60.604 63.158 0.00 0.00 0.00 4.46
6764 7036 2.351738 GCATTCGTTTCTGAAAGGTGGG 60.352 50.000 18.87 11.90 0.00 4.61
6831 7108 1.068055 CACCAGCCTTGCATTTCTCAC 60.068 52.381 0.00 0.00 0.00 3.51
6846 7123 1.403249 GGCTTGCACAAATAGCACCAG 60.403 52.381 9.41 0.00 42.54 4.00
6849 7126 1.986698 CAGGCTTGCACAAATAGCAC 58.013 50.000 9.41 0.00 42.54 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.