Multiple sequence alignment - TraesCS1B01G283000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G283000 chr1B 100.000 3386 0 0 1 3386 492096895 492100280 0.000000e+00 6253.0
1 TraesCS1B01G283000 chr1B 74.786 234 50 9 309 539 403428846 403429073 2.780000e-16 97.1
2 TraesCS1B01G283000 chr1D 93.988 2911 150 16 482 3386 367724621 367727512 0.000000e+00 4383.0
3 TraesCS1B01G283000 chr1D 82.759 290 45 3 29 313 63559673 63559962 1.560000e-63 254.0
4 TraesCS1B01G283000 chr1D 93.064 173 11 1 313 485 367675830 367676001 5.610000e-63 252.0
5 TraesCS1B01G283000 chr1D 81.633 294 41 9 29 312 63602996 63603286 7.310000e-57 231.0
6 TraesCS1B01G283000 chr1D 73.148 324 73 12 309 628 299306436 299306749 1.660000e-18 104.0
7 TraesCS1B01G283000 chr7A 89.469 2146 188 24 773 2908 145034244 145032127 0.000000e+00 2676.0
8 TraesCS1B01G283000 chr7D 88.858 2145 183 33 773 2908 142700414 142698317 0.000000e+00 2586.0
9 TraesCS1B01G283000 chr7D 83.678 435 69 2 2953 3386 385861233 385860800 3.140000e-110 409.0
10 TraesCS1B01G283000 chr7D 84.116 277 31 9 44 312 535725735 535725464 4.340000e-64 255.0
11 TraesCS1B01G283000 chr7B 88.293 1324 123 21 1596 2908 107337184 107335882 0.000000e+00 1557.0
12 TraesCS1B01G283000 chr7B 89.533 793 60 11 804 1593 107338001 107337229 0.000000e+00 983.0
13 TraesCS1B01G283000 chr2B 85.275 455 64 3 2933 3386 374090525 374090073 1.840000e-127 466.0
14 TraesCS1B01G283000 chr3D 85.126 437 55 9 2957 3386 104687885 104687452 4.010000e-119 438.0
15 TraesCS1B01G283000 chr3D 83.706 313 48 1 1 310 180667379 180667067 3.300000e-75 292.0
16 TraesCS1B01G283000 chr2D 85.211 426 59 4 2963 3386 180545396 180544973 5.190000e-118 435.0
17 TraesCS1B01G283000 chr2D 84.884 430 62 3 2959 3386 331771882 331771454 6.710000e-117 431.0
18 TraesCS1B01G283000 chr5D 83.589 457 65 10 2932 3383 329253530 329253981 1.450000e-113 420.0
19 TraesCS1B01G283000 chr5D 82.979 470 68 10 2924 3386 216393062 216392598 6.760000e-112 414.0
20 TraesCS1B01G283000 chr3B 84.272 426 63 4 2963 3386 303313112 303312689 2.430000e-111 412.0
21 TraesCS1B01G283000 chr6B 83.105 219 30 7 97 311 535353569 535353784 3.450000e-45 193.0
22 TraesCS1B01G283000 chr4D 82.883 222 28 9 97 312 14963879 14964096 1.240000e-44 191.0
23 TraesCS1B01G283000 chr1A 82.000 100 18 0 467 566 373465011 373465110 6.020000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G283000 chr1B 492096895 492100280 3385 False 6253 6253 100.000 1 3386 1 chr1B.!!$F2 3385
1 TraesCS1B01G283000 chr1D 367724621 367727512 2891 False 4383 4383 93.988 482 3386 1 chr1D.!!$F5 2904
2 TraesCS1B01G283000 chr7A 145032127 145034244 2117 True 2676 2676 89.469 773 2908 1 chr7A.!!$R1 2135
3 TraesCS1B01G283000 chr7D 142698317 142700414 2097 True 2586 2586 88.858 773 2908 1 chr7D.!!$R1 2135
4 TraesCS1B01G283000 chr7B 107335882 107338001 2119 True 1270 1557 88.913 804 2908 2 chr7B.!!$R1 2104

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
392 393 0.028505 CTAGCGCGTACCGTACATGT 59.971 55.0 8.43 2.69 39.71 3.21 F
551 552 0.185175 TACTCATCGCTAGAGGCCCA 59.815 55.0 0.00 0.00 37.43 5.36 F
559 560 0.328258 GCTAGAGGCCCAAACCTTGA 59.672 55.0 0.00 0.00 41.32 3.02 F
2247 2296 0.472471 TTGTCACCACCAAGACTCCC 59.528 55.0 0.00 0.00 35.81 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1408 1412 0.530650 CTGGCGCTTGGTACGATCAT 60.531 55.000 7.64 0.0 0.0 2.45 R
2247 2296 1.008538 GTGGCTTGAAACCTGCACG 60.009 57.895 0.00 0.0 0.0 5.34 R
2302 2351 1.234821 CTGTAGCGTTGCCTTTCCAA 58.765 50.000 0.00 0.0 0.0 3.53 R
3352 3412 1.837439 TCCACAATTCCACTATCGGCT 59.163 47.619 0.00 0.0 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.350219 AAGGGCATCAAATACAGACGT 57.650 42.857 0.00 0.00 0.00 4.34
23 24 3.350219 AGGGCATCAAATACAGACGTT 57.650 42.857 0.00 0.00 0.00 3.99
24 25 4.481368 AGGGCATCAAATACAGACGTTA 57.519 40.909 0.00 0.00 0.00 3.18
25 26 5.036117 AGGGCATCAAATACAGACGTTAT 57.964 39.130 0.00 0.00 0.00 1.89
26 27 4.816385 AGGGCATCAAATACAGACGTTATG 59.184 41.667 0.00 0.00 0.00 1.90
27 28 4.814234 GGGCATCAAATACAGACGTTATGA 59.186 41.667 8.52 0.00 0.00 2.15
28 29 5.050091 GGGCATCAAATACAGACGTTATGAG 60.050 44.000 8.52 0.00 0.00 2.90
29 30 5.523916 GGCATCAAATACAGACGTTATGAGT 59.476 40.000 8.52 0.00 0.00 3.41
30 31 6.700081 GGCATCAAATACAGACGTTATGAGTA 59.300 38.462 8.52 0.00 0.00 2.59
31 32 7.223971 GGCATCAAATACAGACGTTATGAGTAA 59.776 37.037 8.52 0.00 0.00 2.24
32 33 8.600625 GCATCAAATACAGACGTTATGAGTAAA 58.399 33.333 8.52 0.00 0.00 2.01
34 35 8.181487 TCAAATACAGACGTTATGAGTAAAGC 57.819 34.615 8.52 0.00 0.00 3.51
35 36 8.033038 TCAAATACAGACGTTATGAGTAAAGCT 58.967 33.333 8.52 0.00 0.00 3.74
36 37 7.988904 AATACAGACGTTATGAGTAAAGCTC 57.011 36.000 8.52 0.00 44.36 4.09
44 45 3.534721 GAGTAAAGCTCGCACCCTT 57.465 52.632 0.00 0.00 34.13 3.95
45 46 1.809684 GAGTAAAGCTCGCACCCTTT 58.190 50.000 0.00 0.00 34.13 3.11
46 47 2.968675 GAGTAAAGCTCGCACCCTTTA 58.031 47.619 0.00 0.00 34.13 1.85
47 48 2.671888 GAGTAAAGCTCGCACCCTTTAC 59.328 50.000 16.32 16.32 46.91 2.01
48 49 2.696506 GTAAAGCTCGCACCCTTTACT 58.303 47.619 16.60 0.00 44.85 2.24
49 50 2.271944 AAAGCTCGCACCCTTTACTT 57.728 45.000 0.00 0.00 30.03 2.24
50 51 1.809684 AAGCTCGCACCCTTTACTTC 58.190 50.000 0.00 0.00 0.00 3.01
51 52 0.977395 AGCTCGCACCCTTTACTTCT 59.023 50.000 0.00 0.00 0.00 2.85
52 53 1.066787 AGCTCGCACCCTTTACTTCTC 60.067 52.381 0.00 0.00 0.00 2.87
53 54 2.007547 GCTCGCACCCTTTACTTCTCC 61.008 57.143 0.00 0.00 0.00 3.71
54 55 1.275291 CTCGCACCCTTTACTTCTCCA 59.725 52.381 0.00 0.00 0.00 3.86
55 56 1.906574 TCGCACCCTTTACTTCTCCAT 59.093 47.619 0.00 0.00 0.00 3.41
56 57 2.304761 TCGCACCCTTTACTTCTCCATT 59.695 45.455 0.00 0.00 0.00 3.16
57 58 3.081804 CGCACCCTTTACTTCTCCATTT 58.918 45.455 0.00 0.00 0.00 2.32
58 59 4.020039 TCGCACCCTTTACTTCTCCATTTA 60.020 41.667 0.00 0.00 0.00 1.40
59 60 4.698304 CGCACCCTTTACTTCTCCATTTAA 59.302 41.667 0.00 0.00 0.00 1.52
60 61 5.391629 CGCACCCTTTACTTCTCCATTTAAC 60.392 44.000 0.00 0.00 0.00 2.01
61 62 5.105877 GCACCCTTTACTTCTCCATTTAACC 60.106 44.000 0.00 0.00 0.00 2.85
62 63 5.417894 CACCCTTTACTTCTCCATTTAACCC 59.582 44.000 0.00 0.00 0.00 4.11
63 64 5.315109 ACCCTTTACTTCTCCATTTAACCCT 59.685 40.000 0.00 0.00 0.00 4.34
64 65 6.183361 ACCCTTTACTTCTCCATTTAACCCTT 60.183 38.462 0.00 0.00 0.00 3.95
65 66 6.152831 CCCTTTACTTCTCCATTTAACCCTTG 59.847 42.308 0.00 0.00 0.00 3.61
66 67 6.152831 CCTTTACTTCTCCATTTAACCCTTGG 59.847 42.308 0.00 0.00 0.00 3.61
67 68 4.047627 ACTTCTCCATTTAACCCTTGGG 57.952 45.455 3.77 3.77 0.00 4.12
68 69 3.401342 ACTTCTCCATTTAACCCTTGGGT 59.599 43.478 5.34 5.34 0.00 4.51
69 70 4.604490 ACTTCTCCATTTAACCCTTGGGTA 59.396 41.667 12.27 0.00 0.00 3.69
70 71 5.075344 ACTTCTCCATTTAACCCTTGGGTAA 59.925 40.000 12.27 4.13 32.43 2.85
71 72 5.806955 TCTCCATTTAACCCTTGGGTAAT 57.193 39.130 12.27 6.40 34.57 1.89
72 73 5.515106 TCTCCATTTAACCCTTGGGTAATG 58.485 41.667 19.89 19.89 34.57 1.90
73 74 5.254267 TCTCCATTTAACCCTTGGGTAATGA 59.746 40.000 24.98 15.12 34.57 2.57
74 75 5.515106 TCCATTTAACCCTTGGGTAATGAG 58.485 41.667 24.98 18.04 34.57 2.90
75 76 4.649218 CCATTTAACCCTTGGGTAATGAGG 59.351 45.833 24.98 15.98 34.57 3.86
76 77 3.375647 TTAACCCTTGGGTAATGAGGC 57.624 47.619 12.27 0.00 28.82 4.70
77 78 1.080638 AACCCTTGGGTAATGAGGCA 58.919 50.000 12.27 0.00 0.00 4.75
78 79 1.308877 ACCCTTGGGTAATGAGGCAT 58.691 50.000 10.01 0.00 0.00 4.40
79 80 1.645919 ACCCTTGGGTAATGAGGCATT 59.354 47.619 10.01 0.00 37.80 3.56
80 81 2.310538 CCCTTGGGTAATGAGGCATTC 58.689 52.381 0.00 0.00 35.54 2.67
81 82 2.358090 CCCTTGGGTAATGAGGCATTCA 60.358 50.000 0.00 0.00 40.85 2.57
82 83 2.689983 CCTTGGGTAATGAGGCATTCAC 59.310 50.000 0.00 0.00 38.99 3.18
83 84 2.036958 TGGGTAATGAGGCATTCACG 57.963 50.000 0.00 0.00 38.99 4.35
84 85 1.557371 TGGGTAATGAGGCATTCACGA 59.443 47.619 0.00 0.00 38.99 4.35
85 86 2.213499 GGGTAATGAGGCATTCACGAG 58.787 52.381 0.00 0.00 38.99 4.18
86 87 2.213499 GGTAATGAGGCATTCACGAGG 58.787 52.381 0.00 0.00 38.99 4.63
87 88 2.213499 GTAATGAGGCATTCACGAGGG 58.787 52.381 0.00 0.00 38.99 4.30
88 89 0.107017 AATGAGGCATTCACGAGGGG 60.107 55.000 0.00 0.00 38.99 4.79
89 90 0.982852 ATGAGGCATTCACGAGGGGA 60.983 55.000 0.00 0.00 38.99 4.81
90 91 1.153349 GAGGCATTCACGAGGGGAC 60.153 63.158 0.00 0.00 0.00 4.46
91 92 1.899437 GAGGCATTCACGAGGGGACA 61.899 60.000 0.00 0.00 0.00 4.02
92 93 1.224592 GGCATTCACGAGGGGACAT 59.775 57.895 0.00 0.00 0.00 3.06
93 94 0.468226 GGCATTCACGAGGGGACATA 59.532 55.000 0.00 0.00 0.00 2.29
94 95 1.134220 GGCATTCACGAGGGGACATAA 60.134 52.381 0.00 0.00 0.00 1.90
95 96 2.213499 GCATTCACGAGGGGACATAAG 58.787 52.381 0.00 0.00 0.00 1.73
96 97 2.158957 GCATTCACGAGGGGACATAAGA 60.159 50.000 0.00 0.00 0.00 2.10
97 98 3.458189 CATTCACGAGGGGACATAAGAC 58.542 50.000 0.00 0.00 0.00 3.01
98 99 2.526888 TCACGAGGGGACATAAGACT 57.473 50.000 0.00 0.00 0.00 3.24
99 100 2.376109 TCACGAGGGGACATAAGACTC 58.624 52.381 0.00 0.00 0.00 3.36
100 101 2.025226 TCACGAGGGGACATAAGACTCT 60.025 50.000 0.00 0.00 0.00 3.24
101 102 3.201487 TCACGAGGGGACATAAGACTCTA 59.799 47.826 0.00 0.00 0.00 2.43
102 103 4.141228 TCACGAGGGGACATAAGACTCTAT 60.141 45.833 0.00 0.00 0.00 1.98
103 104 5.072736 TCACGAGGGGACATAAGACTCTATA 59.927 44.000 0.00 0.00 0.00 1.31
104 105 5.946972 CACGAGGGGACATAAGACTCTATAT 59.053 44.000 0.00 0.00 0.00 0.86
105 106 7.037802 TCACGAGGGGACATAAGACTCTATATA 60.038 40.741 0.00 0.00 0.00 0.86
106 107 7.610692 CACGAGGGGACATAAGACTCTATATAA 59.389 40.741 0.00 0.00 0.00 0.98
107 108 7.830201 ACGAGGGGACATAAGACTCTATATAAG 59.170 40.741 0.00 0.00 0.00 1.73
108 109 7.201750 CGAGGGGACATAAGACTCTATATAAGC 60.202 44.444 0.00 0.00 0.00 3.09
109 110 6.898521 AGGGGACATAAGACTCTATATAAGCC 59.101 42.308 0.00 0.00 0.00 4.35
110 111 6.668283 GGGGACATAAGACTCTATATAAGCCA 59.332 42.308 0.00 0.00 0.00 4.75
111 112 7.363968 GGGGACATAAGACTCTATATAAGCCAC 60.364 44.444 0.00 0.00 0.00 5.01
112 113 7.363968 GGGACATAAGACTCTATATAAGCCACC 60.364 44.444 0.00 0.00 0.00 4.61
113 114 7.363968 GGACATAAGACTCTATATAAGCCACCC 60.364 44.444 0.00 0.00 0.00 4.61
114 115 6.440965 ACATAAGACTCTATATAAGCCACCCC 59.559 42.308 0.00 0.00 0.00 4.95
115 116 4.768807 AGACTCTATATAAGCCACCCCT 57.231 45.455 0.00 0.00 0.00 4.79
116 117 4.679331 AGACTCTATATAAGCCACCCCTC 58.321 47.826 0.00 0.00 0.00 4.30
117 118 4.358614 AGACTCTATATAAGCCACCCCTCT 59.641 45.833 0.00 0.00 0.00 3.69
118 119 4.421131 ACTCTATATAAGCCACCCCTCTG 58.579 47.826 0.00 0.00 0.00 3.35
119 120 3.173965 TCTATATAAGCCACCCCTCTGC 58.826 50.000 0.00 0.00 0.00 4.26
120 121 2.124560 ATATAAGCCACCCCTCTGCT 57.875 50.000 0.00 0.00 36.79 4.24
121 122 1.424638 TATAAGCCACCCCTCTGCTC 58.575 55.000 0.00 0.00 33.36 4.26
122 123 1.348775 ATAAGCCACCCCTCTGCTCC 61.349 60.000 0.00 0.00 33.36 4.70
123 124 2.477190 TAAGCCACCCCTCTGCTCCT 62.477 60.000 0.00 0.00 33.36 3.69
124 125 2.365635 GCCACCCCTCTGCTCCTA 60.366 66.667 0.00 0.00 0.00 2.94
125 126 2.736826 GCCACCCCTCTGCTCCTAC 61.737 68.421 0.00 0.00 0.00 3.18
126 127 1.306141 CCACCCCTCTGCTCCTACA 60.306 63.158 0.00 0.00 0.00 2.74
127 128 1.617947 CCACCCCTCTGCTCCTACAC 61.618 65.000 0.00 0.00 0.00 2.90
128 129 0.904865 CACCCCTCTGCTCCTACACA 60.905 60.000 0.00 0.00 0.00 3.72
129 130 0.178903 ACCCCTCTGCTCCTACACAA 60.179 55.000 0.00 0.00 0.00 3.33
130 131 0.539051 CCCCTCTGCTCCTACACAAG 59.461 60.000 0.00 0.00 0.00 3.16
132 133 0.539051 CCTCTGCTCCTACACAAGGG 59.461 60.000 0.00 0.00 46.55 3.95
133 134 1.270907 CTCTGCTCCTACACAAGGGT 58.729 55.000 0.00 0.00 46.55 4.34
134 135 1.625818 CTCTGCTCCTACACAAGGGTT 59.374 52.381 0.00 0.00 46.55 4.11
135 136 1.623811 TCTGCTCCTACACAAGGGTTC 59.376 52.381 0.00 0.00 46.55 3.62
136 137 0.320374 TGCTCCTACACAAGGGTTCG 59.680 55.000 0.00 0.00 46.55 3.95
137 138 1.019805 GCTCCTACACAAGGGTTCGC 61.020 60.000 0.00 0.00 46.55 4.70
138 139 0.320374 CTCCTACACAAGGGTTCGCA 59.680 55.000 0.00 0.00 46.55 5.10
139 140 0.759959 TCCTACACAAGGGTTCGCAA 59.240 50.000 0.00 0.00 46.55 4.85
140 141 0.872388 CCTACACAAGGGTTCGCAAC 59.128 55.000 0.00 0.00 42.32 4.17
154 155 5.391060 GTTCGCAACCTCTATAACACATC 57.609 43.478 0.00 0.00 0.00 3.06
155 156 4.729227 TCGCAACCTCTATAACACATCA 57.271 40.909 0.00 0.00 0.00 3.07
156 157 4.430007 TCGCAACCTCTATAACACATCAC 58.570 43.478 0.00 0.00 0.00 3.06
157 158 4.081917 TCGCAACCTCTATAACACATCACA 60.082 41.667 0.00 0.00 0.00 3.58
158 159 4.032900 CGCAACCTCTATAACACATCACAC 59.967 45.833 0.00 0.00 0.00 3.82
159 160 4.935205 GCAACCTCTATAACACATCACACA 59.065 41.667 0.00 0.00 0.00 3.72
160 161 5.163854 GCAACCTCTATAACACATCACACAC 60.164 44.000 0.00 0.00 0.00 3.82
161 162 6.166279 CAACCTCTATAACACATCACACACT 58.834 40.000 0.00 0.00 0.00 3.55
162 163 7.320399 CAACCTCTATAACACATCACACACTA 58.680 38.462 0.00 0.00 0.00 2.74
163 164 7.661536 ACCTCTATAACACATCACACACTAT 57.338 36.000 0.00 0.00 0.00 2.12
164 165 8.762481 ACCTCTATAACACATCACACACTATA 57.238 34.615 0.00 0.00 0.00 1.31
165 166 9.197306 ACCTCTATAACACATCACACACTATAA 57.803 33.333 0.00 0.00 0.00 0.98
166 167 9.684448 CCTCTATAACACATCACACACTATAAG 57.316 37.037 0.00 0.00 0.00 1.73
171 172 6.727824 ACACATCACACACTATAAGAAAGC 57.272 37.500 0.00 0.00 0.00 3.51
172 173 6.467677 ACACATCACACACTATAAGAAAGCT 58.532 36.000 0.00 0.00 0.00 3.74
173 174 6.591834 ACACATCACACACTATAAGAAAGCTC 59.408 38.462 0.00 0.00 0.00 4.09
174 175 6.036517 CACATCACACACTATAAGAAAGCTCC 59.963 42.308 0.00 0.00 0.00 4.70
175 176 6.070538 ACATCACACACTATAAGAAAGCTCCT 60.071 38.462 0.00 0.00 0.00 3.69
176 177 5.724328 TCACACACTATAAGAAAGCTCCTG 58.276 41.667 0.00 0.00 0.00 3.86
177 178 4.331168 CACACACTATAAGAAAGCTCCTGC 59.669 45.833 0.00 0.00 40.05 4.85
178 179 3.553511 CACACTATAAGAAAGCTCCTGCG 59.446 47.826 0.00 0.00 45.42 5.18
179 180 3.126831 CACTATAAGAAAGCTCCTGCGG 58.873 50.000 0.00 0.00 45.42 5.69
180 181 2.139118 CTATAAGAAAGCTCCTGCGGC 58.861 52.381 0.00 0.00 45.42 6.53
181 182 0.253044 ATAAGAAAGCTCCTGCGGCA 59.747 50.000 1.29 1.29 45.42 5.69
182 183 0.673644 TAAGAAAGCTCCTGCGGCAC 60.674 55.000 0.00 0.00 45.42 5.01
183 184 3.435186 GAAAGCTCCTGCGGCACC 61.435 66.667 0.00 0.00 45.42 5.01
188 189 4.803426 CTCCTGCGGCACCGAGAC 62.803 72.222 14.43 0.00 42.83 3.36
195 196 4.309950 GGCACCGAGACGTTGGGT 62.310 66.667 7.26 4.17 38.62 4.51
196 197 2.737376 GCACCGAGACGTTGGGTC 60.737 66.667 3.46 0.00 46.45 4.46
205 206 2.598686 GACGTTGGGTCTCCTATTCC 57.401 55.000 0.00 0.00 42.62 3.01
206 207 0.822164 ACGTTGGGTCTCCTATTCCG 59.178 55.000 0.00 0.00 0.00 4.30
207 208 1.108776 CGTTGGGTCTCCTATTCCGA 58.891 55.000 0.00 0.00 0.00 4.55
208 209 1.067212 CGTTGGGTCTCCTATTCCGAG 59.933 57.143 0.00 0.00 0.00 4.63
209 210 2.385803 GTTGGGTCTCCTATTCCGAGA 58.614 52.381 0.00 0.00 33.97 4.04
210 211 2.362717 GTTGGGTCTCCTATTCCGAGAG 59.637 54.545 0.00 0.00 37.05 3.20
223 224 1.803943 CGAGAGGGTCCTGAACTCG 59.196 63.158 10.71 10.71 42.77 4.18
224 225 0.961358 CGAGAGGGTCCTGAACTCGT 60.961 60.000 14.62 0.00 43.19 4.18
225 226 1.678123 CGAGAGGGTCCTGAACTCGTA 60.678 57.143 14.62 0.00 43.19 3.43
226 227 2.444421 GAGAGGGTCCTGAACTCGTAA 58.556 52.381 0.00 0.00 36.40 3.18
227 228 2.824341 GAGAGGGTCCTGAACTCGTAAA 59.176 50.000 0.00 0.00 36.40 2.01
228 229 3.442076 AGAGGGTCCTGAACTCGTAAAT 58.558 45.455 0.00 0.00 36.40 1.40
229 230 3.447944 AGAGGGTCCTGAACTCGTAAATC 59.552 47.826 0.00 0.00 36.40 2.17
230 231 2.500504 AGGGTCCTGAACTCGTAAATCC 59.499 50.000 0.00 0.00 31.60 3.01
231 232 2.500504 GGGTCCTGAACTCGTAAATCCT 59.499 50.000 0.00 0.00 0.00 3.24
232 233 3.703052 GGGTCCTGAACTCGTAAATCCTA 59.297 47.826 0.00 0.00 0.00 2.94
233 234 4.202131 GGGTCCTGAACTCGTAAATCCTAG 60.202 50.000 0.00 0.00 0.00 3.02
234 235 4.401837 GGTCCTGAACTCGTAAATCCTAGT 59.598 45.833 0.00 0.00 0.00 2.57
235 236 5.341617 GTCCTGAACTCGTAAATCCTAGTG 58.658 45.833 0.00 0.00 0.00 2.74
236 237 5.014858 TCCTGAACTCGTAAATCCTAGTGT 58.985 41.667 0.00 0.00 0.00 3.55
237 238 6.094603 GTCCTGAACTCGTAAATCCTAGTGTA 59.905 42.308 0.00 0.00 0.00 2.90
238 239 6.094603 TCCTGAACTCGTAAATCCTAGTGTAC 59.905 42.308 0.00 0.00 0.00 2.90
239 240 6.127814 CCTGAACTCGTAAATCCTAGTGTACA 60.128 42.308 0.00 0.00 0.00 2.90
240 241 7.218228 TGAACTCGTAAATCCTAGTGTACAA 57.782 36.000 0.00 0.00 0.00 2.41
241 242 7.086376 TGAACTCGTAAATCCTAGTGTACAAC 58.914 38.462 0.00 0.00 0.00 3.32
242 243 5.958955 ACTCGTAAATCCTAGTGTACAACC 58.041 41.667 0.00 0.00 0.00 3.77
243 244 5.477984 ACTCGTAAATCCTAGTGTACAACCA 59.522 40.000 0.00 0.00 0.00 3.67
244 245 5.713025 TCGTAAATCCTAGTGTACAACCAC 58.287 41.667 0.00 0.00 35.53 4.16
245 246 5.243507 TCGTAAATCCTAGTGTACAACCACA 59.756 40.000 0.00 0.00 37.82 4.17
253 254 3.053831 GTGTACAACCACACCATAGCT 57.946 47.619 0.00 0.00 42.46 3.32
254 255 4.196626 GTGTACAACCACACCATAGCTA 57.803 45.455 0.00 0.00 42.46 3.32
255 256 4.181578 GTGTACAACCACACCATAGCTAG 58.818 47.826 0.00 0.00 42.46 3.42
256 257 4.081862 GTGTACAACCACACCATAGCTAGA 60.082 45.833 0.00 0.00 42.46 2.43
257 258 3.611766 ACAACCACACCATAGCTAGAC 57.388 47.619 0.00 0.00 0.00 2.59
258 259 3.173965 ACAACCACACCATAGCTAGACT 58.826 45.455 0.00 0.00 0.00 3.24
259 260 3.195825 ACAACCACACCATAGCTAGACTC 59.804 47.826 0.00 0.00 0.00 3.36
260 261 3.390175 ACCACACCATAGCTAGACTCT 57.610 47.619 0.00 0.00 0.00 3.24
261 262 3.027412 ACCACACCATAGCTAGACTCTG 58.973 50.000 0.00 0.00 0.00 3.35
262 263 2.223923 CCACACCATAGCTAGACTCTGC 60.224 54.545 0.00 0.00 0.00 4.26
263 264 2.035632 ACACCATAGCTAGACTCTGCC 58.964 52.381 0.00 0.00 0.00 4.85
264 265 1.342819 CACCATAGCTAGACTCTGCCC 59.657 57.143 0.00 0.00 0.00 5.36
265 266 1.219213 ACCATAGCTAGACTCTGCCCT 59.781 52.381 0.00 0.00 0.00 5.19
266 267 1.892474 CCATAGCTAGACTCTGCCCTC 59.108 57.143 0.00 0.00 0.00 4.30
267 268 2.490718 CCATAGCTAGACTCTGCCCTCT 60.491 54.545 0.00 0.00 0.00 3.69
268 269 2.649531 TAGCTAGACTCTGCCCTCTC 57.350 55.000 0.00 0.00 0.00 3.20
269 270 0.628522 AGCTAGACTCTGCCCTCTCA 59.371 55.000 0.00 0.00 0.00 3.27
270 271 1.217689 AGCTAGACTCTGCCCTCTCAT 59.782 52.381 0.00 0.00 0.00 2.90
271 272 2.445145 AGCTAGACTCTGCCCTCTCATA 59.555 50.000 0.00 0.00 0.00 2.15
272 273 2.556622 GCTAGACTCTGCCCTCTCATAC 59.443 54.545 0.00 0.00 0.00 2.39
273 274 1.686355 AGACTCTGCCCTCTCATACG 58.314 55.000 0.00 0.00 0.00 3.06
274 275 1.064314 AGACTCTGCCCTCTCATACGT 60.064 52.381 0.00 0.00 0.00 3.57
275 276 2.172930 AGACTCTGCCCTCTCATACGTA 59.827 50.000 0.00 0.00 0.00 3.57
276 277 2.291190 GACTCTGCCCTCTCATACGTAC 59.709 54.545 0.00 0.00 0.00 3.67
277 278 1.609555 CTCTGCCCTCTCATACGTACC 59.390 57.143 0.00 0.00 0.00 3.34
278 279 0.674534 CTGCCCTCTCATACGTACCC 59.325 60.000 0.00 0.00 0.00 3.69
279 280 0.757935 TGCCCTCTCATACGTACCCC 60.758 60.000 0.00 0.00 0.00 4.95
280 281 1.470165 GCCCTCTCATACGTACCCCC 61.470 65.000 0.00 0.00 0.00 5.40
281 282 0.105862 CCCTCTCATACGTACCCCCA 60.106 60.000 0.00 0.00 0.00 4.96
282 283 1.482553 CCCTCTCATACGTACCCCCAT 60.483 57.143 0.00 0.00 0.00 4.00
283 284 2.326428 CCTCTCATACGTACCCCCATT 58.674 52.381 0.00 0.00 0.00 3.16
284 285 2.299297 CCTCTCATACGTACCCCCATTC 59.701 54.545 0.00 0.00 0.00 2.67
285 286 3.231818 CTCTCATACGTACCCCCATTCT 58.768 50.000 0.00 0.00 0.00 2.40
286 287 3.228453 TCTCATACGTACCCCCATTCTC 58.772 50.000 0.00 0.00 0.00 2.87
287 288 3.117246 TCTCATACGTACCCCCATTCTCT 60.117 47.826 0.00 0.00 0.00 3.10
288 289 4.105217 TCTCATACGTACCCCCATTCTCTA 59.895 45.833 0.00 0.00 0.00 2.43
289 290 4.147321 TCATACGTACCCCCATTCTCTAC 58.853 47.826 0.00 0.00 0.00 2.59
290 291 2.842645 ACGTACCCCCATTCTCTACT 57.157 50.000 0.00 0.00 0.00 2.57
291 292 3.111741 ACGTACCCCCATTCTCTACTT 57.888 47.619 0.00 0.00 0.00 2.24
292 293 3.447950 ACGTACCCCCATTCTCTACTTT 58.552 45.455 0.00 0.00 0.00 2.66
293 294 3.450096 ACGTACCCCCATTCTCTACTTTC 59.550 47.826 0.00 0.00 0.00 2.62
294 295 3.449737 CGTACCCCCATTCTCTACTTTCA 59.550 47.826 0.00 0.00 0.00 2.69
295 296 4.441634 CGTACCCCCATTCTCTACTTTCAG 60.442 50.000 0.00 0.00 0.00 3.02
296 297 3.803340 ACCCCCATTCTCTACTTTCAGA 58.197 45.455 0.00 0.00 0.00 3.27
297 298 4.375313 ACCCCCATTCTCTACTTTCAGAT 58.625 43.478 0.00 0.00 0.00 2.90
298 299 4.410555 ACCCCCATTCTCTACTTTCAGATC 59.589 45.833 0.00 0.00 0.00 2.75
299 300 4.657969 CCCCCATTCTCTACTTTCAGATCT 59.342 45.833 0.00 0.00 0.00 2.75
300 301 5.454471 CCCCCATTCTCTACTTTCAGATCTG 60.454 48.000 17.07 17.07 0.00 2.90
301 302 5.130145 CCCCATTCTCTACTTTCAGATCTGT 59.870 44.000 21.92 5.72 0.00 3.41
302 303 6.352565 CCCCATTCTCTACTTTCAGATCTGTT 60.353 42.308 21.92 8.12 0.00 3.16
303 304 6.760770 CCCATTCTCTACTTTCAGATCTGTTC 59.239 42.308 21.92 0.00 0.00 3.18
304 305 6.760770 CCATTCTCTACTTTCAGATCTGTTCC 59.239 42.308 21.92 0.00 0.00 3.62
305 306 5.923733 TCTCTACTTTCAGATCTGTTCCC 57.076 43.478 21.92 0.00 0.00 3.97
306 307 5.333581 TCTCTACTTTCAGATCTGTTCCCA 58.666 41.667 21.92 0.00 0.00 4.37
307 308 5.186021 TCTCTACTTTCAGATCTGTTCCCAC 59.814 44.000 21.92 0.00 0.00 4.61
308 309 3.045601 ACTTTCAGATCTGTTCCCACG 57.954 47.619 21.92 7.72 0.00 4.94
309 310 2.632996 ACTTTCAGATCTGTTCCCACGA 59.367 45.455 21.92 0.00 0.00 4.35
310 311 2.743636 TTCAGATCTGTTCCCACGAC 57.256 50.000 21.92 0.00 0.00 4.34
311 312 1.627864 TCAGATCTGTTCCCACGACA 58.372 50.000 21.92 0.00 0.00 4.35
312 313 1.272490 TCAGATCTGTTCCCACGACAC 59.728 52.381 21.92 0.00 0.00 3.67
313 314 1.000843 CAGATCTGTTCCCACGACACA 59.999 52.381 14.95 0.00 0.00 3.72
314 315 1.902508 AGATCTGTTCCCACGACACAT 59.097 47.619 0.00 0.00 0.00 3.21
315 316 3.096852 AGATCTGTTCCCACGACACATA 58.903 45.455 0.00 0.00 0.00 2.29
316 317 2.736144 TCTGTTCCCACGACACATAC 57.264 50.000 0.00 0.00 0.00 2.39
317 318 2.244695 TCTGTTCCCACGACACATACT 58.755 47.619 0.00 0.00 0.00 2.12
318 319 2.631062 TCTGTTCCCACGACACATACTT 59.369 45.455 0.00 0.00 0.00 2.24
319 320 2.736721 CTGTTCCCACGACACATACTTG 59.263 50.000 0.00 0.00 0.00 3.16
320 321 2.073816 GTTCCCACGACACATACTTGG 58.926 52.381 0.00 0.00 0.00 3.61
321 322 0.036765 TCCCACGACACATACTTGGC 60.037 55.000 0.00 0.00 0.00 4.52
322 323 1.024579 CCCACGACACATACTTGGCC 61.025 60.000 0.00 0.00 0.00 5.36
323 324 1.024579 CCACGACACATACTTGGCCC 61.025 60.000 0.00 0.00 0.00 5.80
324 325 1.024579 CACGACACATACTTGGCCCC 61.025 60.000 0.00 0.00 0.00 5.80
325 326 1.451387 CGACACATACTTGGCCCCC 60.451 63.158 0.00 0.00 0.00 5.40
326 327 1.688811 GACACATACTTGGCCCCCA 59.311 57.895 0.00 0.00 0.00 4.96
327 328 0.039035 GACACATACTTGGCCCCCAA 59.961 55.000 0.00 0.00 41.69 4.12
334 335 3.506743 TTGGCCCCCAAGTCAGCA 61.507 61.111 0.00 0.00 38.75 4.41
335 336 2.855770 TTGGCCCCCAAGTCAGCAT 61.856 57.895 0.00 0.00 38.75 3.79
336 337 2.757099 GGCCCCCAAGTCAGCATG 60.757 66.667 0.00 0.00 37.54 4.06
337 338 2.757099 GCCCCCAAGTCAGCATGG 60.757 66.667 0.00 0.00 36.16 3.66
338 339 2.765969 CCCCCAAGTCAGCATGGT 59.234 61.111 0.00 0.00 36.16 3.55
339 340 1.679977 CCCCCAAGTCAGCATGGTG 60.680 63.158 18.87 18.87 36.16 4.17
340 341 1.679977 CCCCAAGTCAGCATGGTGG 60.680 63.158 23.85 8.09 36.16 4.61
341 342 1.379916 CCCAAGTCAGCATGGTGGA 59.620 57.895 23.85 8.79 35.72 4.02
342 343 0.679002 CCCAAGTCAGCATGGTGGAG 60.679 60.000 23.85 11.42 35.72 3.86
343 344 0.679002 CCAAGTCAGCATGGTGGAGG 60.679 60.000 23.85 15.94 35.72 4.30
344 345 0.037303 CAAGTCAGCATGGTGGAGGT 59.963 55.000 23.85 5.39 36.16 3.85
345 346 0.326264 AAGTCAGCATGGTGGAGGTC 59.674 55.000 23.85 10.07 36.16 3.85
346 347 0.837691 AGTCAGCATGGTGGAGGTCA 60.838 55.000 23.85 1.17 36.16 4.02
347 348 0.036732 GTCAGCATGGTGGAGGTCAA 59.963 55.000 23.85 0.40 36.16 3.18
348 349 0.325933 TCAGCATGGTGGAGGTCAAG 59.674 55.000 23.85 0.00 36.16 3.02
349 350 0.325933 CAGCATGGTGGAGGTCAAGA 59.674 55.000 17.24 0.00 0.00 3.02
350 351 1.064906 CAGCATGGTGGAGGTCAAGAT 60.065 52.381 17.24 0.00 0.00 2.40
351 352 1.637553 AGCATGGTGGAGGTCAAGATT 59.362 47.619 0.00 0.00 0.00 2.40
352 353 1.747355 GCATGGTGGAGGTCAAGATTG 59.253 52.381 0.00 0.00 0.00 2.67
353 354 2.372264 CATGGTGGAGGTCAAGATTGG 58.628 52.381 0.00 0.00 0.00 3.16
354 355 1.741028 TGGTGGAGGTCAAGATTGGA 58.259 50.000 0.00 0.00 0.00 3.53
355 356 2.278245 TGGTGGAGGTCAAGATTGGAT 58.722 47.619 0.00 0.00 0.00 3.41
356 357 2.239654 TGGTGGAGGTCAAGATTGGATC 59.760 50.000 0.00 0.00 0.00 3.36
357 358 2.507471 GGTGGAGGTCAAGATTGGATCT 59.493 50.000 0.00 0.00 42.61 2.75
358 359 3.711704 GGTGGAGGTCAAGATTGGATCTA 59.288 47.826 0.00 0.00 39.08 1.98
359 360 4.443598 GGTGGAGGTCAAGATTGGATCTAC 60.444 50.000 0.00 0.00 39.08 2.59
360 361 3.711704 TGGAGGTCAAGATTGGATCTACC 59.288 47.826 0.00 2.90 39.08 3.18
361 362 3.970640 GGAGGTCAAGATTGGATCTACCT 59.029 47.826 10.66 10.66 46.19 3.08
363 364 4.624913 AGGTCAAGATTGGATCTACCTCA 58.375 43.478 6.59 0.00 42.10 3.86
364 365 5.222870 AGGTCAAGATTGGATCTACCTCAT 58.777 41.667 6.59 0.00 42.10 2.90
365 366 5.071519 AGGTCAAGATTGGATCTACCTCATG 59.928 44.000 6.59 0.00 42.10 3.07
366 367 5.163258 GGTCAAGATTGGATCTACCTCATGT 60.163 44.000 0.00 0.00 39.08 3.21
367 368 6.042093 GGTCAAGATTGGATCTACCTCATGTA 59.958 42.308 0.00 0.00 39.08 2.29
368 369 7.419057 GGTCAAGATTGGATCTACCTCATGTAA 60.419 40.741 0.00 0.00 39.08 2.41
369 370 7.987458 GTCAAGATTGGATCTACCTCATGTAAA 59.013 37.037 0.00 0.00 39.08 2.01
370 371 8.548025 TCAAGATTGGATCTACCTCATGTAAAA 58.452 33.333 0.00 0.00 39.08 1.52
371 372 8.616076 CAAGATTGGATCTACCTCATGTAAAAC 58.384 37.037 0.00 0.00 39.08 2.43
372 373 7.283329 AGATTGGATCTACCTCATGTAAAACC 58.717 38.462 0.00 0.00 38.00 3.27
373 374 5.367945 TGGATCTACCTCATGTAAAACCC 57.632 43.478 0.00 0.00 39.86 4.11
374 375 5.036916 TGGATCTACCTCATGTAAAACCCT 58.963 41.667 0.00 0.00 39.86 4.34
375 376 6.206787 TGGATCTACCTCATGTAAAACCCTA 58.793 40.000 0.00 0.00 39.86 3.53
376 377 6.326583 TGGATCTACCTCATGTAAAACCCTAG 59.673 42.308 0.00 0.00 39.86 3.02
377 378 5.609533 TCTACCTCATGTAAAACCCTAGC 57.390 43.478 0.00 0.00 0.00 3.42
378 379 3.261981 ACCTCATGTAAAACCCTAGCG 57.738 47.619 0.00 0.00 0.00 4.26
379 380 1.940613 CCTCATGTAAAACCCTAGCGC 59.059 52.381 0.00 0.00 0.00 5.92
380 381 1.593006 CTCATGTAAAACCCTAGCGCG 59.407 52.381 0.00 0.00 0.00 6.86
381 382 1.066716 TCATGTAAAACCCTAGCGCGT 60.067 47.619 8.43 0.00 0.00 6.01
382 383 2.166050 TCATGTAAAACCCTAGCGCGTA 59.834 45.455 8.43 0.00 0.00 4.42
383 384 1.994916 TGTAAAACCCTAGCGCGTAC 58.005 50.000 8.43 0.00 0.00 3.67
384 385 1.280982 GTAAAACCCTAGCGCGTACC 58.719 55.000 8.43 0.00 0.00 3.34
385 386 0.179140 TAAAACCCTAGCGCGTACCG 60.179 55.000 8.43 0.06 40.75 4.02
386 387 2.158561 AAAACCCTAGCGCGTACCGT 62.159 55.000 8.43 0.00 39.71 4.83
387 388 1.312371 AAACCCTAGCGCGTACCGTA 61.312 55.000 8.43 0.00 39.71 4.02
388 389 1.993369 AACCCTAGCGCGTACCGTAC 61.993 60.000 8.43 0.00 39.71 3.67
389 390 2.472059 CCCTAGCGCGTACCGTACA 61.472 63.158 8.43 0.00 39.71 2.90
390 391 1.650912 CCTAGCGCGTACCGTACAT 59.349 57.895 8.43 0.00 39.71 2.29
391 392 0.659417 CCTAGCGCGTACCGTACATG 60.659 60.000 8.43 0.00 39.71 3.21
392 393 0.028505 CTAGCGCGTACCGTACATGT 59.971 55.000 8.43 2.69 39.71 3.21
393 394 1.261354 CTAGCGCGTACCGTACATGTA 59.739 52.381 8.43 0.08 39.71 2.29
394 395 0.451383 AGCGCGTACCGTACATGTAA 59.549 50.000 7.25 0.00 39.71 2.41
395 396 0.841984 GCGCGTACCGTACATGTAAG 59.158 55.000 7.25 9.61 39.71 2.34
396 397 1.469917 CGCGTACCGTACATGTAAGG 58.530 55.000 29.40 29.40 39.99 2.69
397 398 1.202177 CGCGTACCGTACATGTAAGGT 60.202 52.381 35.37 35.37 46.81 3.50
398 399 2.187707 GCGTACCGTACATGTAAGGTG 58.812 52.381 38.15 28.15 45.27 4.00
399 400 2.159393 GCGTACCGTACATGTAAGGTGA 60.159 50.000 38.15 24.95 45.27 4.02
400 401 3.688272 CGTACCGTACATGTAAGGTGAG 58.312 50.000 38.15 29.83 45.27 3.51
401 402 3.488047 CGTACCGTACATGTAAGGTGAGG 60.488 52.174 38.15 26.95 45.27 3.86
402 403 1.829222 ACCGTACATGTAAGGTGAGGG 59.171 52.381 33.84 18.87 44.30 4.30
403 404 1.472728 CCGTACATGTAAGGTGAGGGC 60.473 57.143 24.79 2.53 31.36 5.19
404 405 1.480954 CGTACATGTAAGGTGAGGGCT 59.519 52.381 7.25 0.00 28.09 5.19
405 406 2.691526 CGTACATGTAAGGTGAGGGCTA 59.308 50.000 7.25 0.00 28.09 3.93
406 407 3.321111 CGTACATGTAAGGTGAGGGCTAT 59.679 47.826 7.25 0.00 28.09 2.97
407 408 3.845781 ACATGTAAGGTGAGGGCTATG 57.154 47.619 0.00 0.00 0.00 2.23
408 409 2.439507 ACATGTAAGGTGAGGGCTATGG 59.560 50.000 0.00 0.00 0.00 2.74
409 410 1.507140 TGTAAGGTGAGGGCTATGGG 58.493 55.000 0.00 0.00 0.00 4.00
410 411 0.765510 GTAAGGTGAGGGCTATGGGG 59.234 60.000 0.00 0.00 0.00 4.96
411 412 0.401395 TAAGGTGAGGGCTATGGGGG 60.401 60.000 0.00 0.00 0.00 5.40
412 413 3.890926 GGTGAGGGCTATGGGGGC 61.891 72.222 0.00 0.00 0.00 5.80
413 414 2.774351 GTGAGGGCTATGGGGGCT 60.774 66.667 0.00 0.00 0.00 5.19
414 415 2.448542 TGAGGGCTATGGGGGCTC 60.449 66.667 0.00 0.00 0.00 4.70
415 416 2.122189 GAGGGCTATGGGGGCTCT 60.122 66.667 0.00 0.00 43.95 4.09
416 417 1.772156 GAGGGCTATGGGGGCTCTT 60.772 63.158 0.00 0.00 41.01 2.85
417 418 0.473886 GAGGGCTATGGGGGCTCTTA 60.474 60.000 0.00 0.00 41.01 2.10
418 419 0.474660 AGGGCTATGGGGGCTCTTAG 60.475 60.000 0.00 0.00 37.18 2.18
419 420 0.473886 GGGCTATGGGGGCTCTTAGA 60.474 60.000 0.00 0.00 0.00 2.10
420 421 1.662686 GGCTATGGGGGCTCTTAGAT 58.337 55.000 0.00 0.00 0.00 1.98
421 422 1.557371 GGCTATGGGGGCTCTTAGATC 59.443 57.143 0.00 0.00 0.00 2.75
422 423 1.557371 GCTATGGGGGCTCTTAGATCC 59.443 57.143 0.00 0.00 0.00 3.36
423 424 2.907892 CTATGGGGGCTCTTAGATCCA 58.092 52.381 4.42 1.06 0.00 3.41
424 425 2.447582 ATGGGGGCTCTTAGATCCAT 57.552 50.000 4.42 3.23 0.00 3.41
425 426 1.734655 TGGGGGCTCTTAGATCCATC 58.265 55.000 4.42 0.00 0.00 3.51
426 427 1.061424 TGGGGGCTCTTAGATCCATCA 60.061 52.381 4.42 0.00 0.00 3.07
427 428 2.057922 GGGGGCTCTTAGATCCATCAA 58.942 52.381 4.42 0.00 0.00 2.57
428 429 2.224646 GGGGGCTCTTAGATCCATCAAC 60.225 54.545 4.42 0.00 0.00 3.18
429 430 2.224646 GGGGCTCTTAGATCCATCAACC 60.225 54.545 4.42 0.00 0.00 3.77
430 431 2.224646 GGGCTCTTAGATCCATCAACCC 60.225 54.545 4.42 0.00 0.00 4.11
431 432 2.439507 GGCTCTTAGATCCATCAACCCA 59.560 50.000 0.00 0.00 0.00 4.51
432 433 3.495806 GGCTCTTAGATCCATCAACCCAG 60.496 52.174 0.00 0.00 0.00 4.45
433 434 3.495806 GCTCTTAGATCCATCAACCCAGG 60.496 52.174 0.00 0.00 0.00 4.45
434 435 3.713764 CTCTTAGATCCATCAACCCAGGT 59.286 47.826 0.00 0.00 0.00 4.00
435 436 4.890988 TCTTAGATCCATCAACCCAGGTA 58.109 43.478 0.00 0.00 0.00 3.08
436 437 4.901849 TCTTAGATCCATCAACCCAGGTAG 59.098 45.833 0.00 0.00 0.00 3.18
437 438 3.421394 AGATCCATCAACCCAGGTAGA 57.579 47.619 0.00 0.00 0.00 2.59
438 439 3.041946 AGATCCATCAACCCAGGTAGAC 58.958 50.000 0.00 0.00 0.00 2.59
439 440 1.580059 TCCATCAACCCAGGTAGACC 58.420 55.000 0.00 0.00 0.00 3.85
440 441 0.546598 CCATCAACCCAGGTAGACCC 59.453 60.000 0.00 0.00 36.42 4.46
441 442 1.285280 CATCAACCCAGGTAGACCCA 58.715 55.000 0.00 0.00 36.42 4.51
442 443 1.633432 CATCAACCCAGGTAGACCCAA 59.367 52.381 0.00 0.00 36.42 4.12
443 444 1.822425 TCAACCCAGGTAGACCCAAA 58.178 50.000 0.00 0.00 36.42 3.28
444 445 1.422402 TCAACCCAGGTAGACCCAAAC 59.578 52.381 0.00 0.00 36.42 2.93
445 446 1.423921 CAACCCAGGTAGACCCAAACT 59.576 52.381 0.00 0.00 36.42 2.66
446 447 1.359168 ACCCAGGTAGACCCAAACTC 58.641 55.000 0.00 0.00 36.42 3.01
447 448 1.132495 ACCCAGGTAGACCCAAACTCT 60.132 52.381 0.00 0.00 36.42 3.24
448 449 1.555533 CCCAGGTAGACCCAAACTCTC 59.444 57.143 0.00 0.00 36.42 3.20
449 450 2.257207 CCAGGTAGACCCAAACTCTCA 58.743 52.381 0.00 0.00 36.42 3.27
450 451 2.234908 CCAGGTAGACCCAAACTCTCAG 59.765 54.545 0.00 0.00 36.42 3.35
451 452 3.165875 CAGGTAGACCCAAACTCTCAGA 58.834 50.000 0.00 0.00 36.42 3.27
452 453 3.578716 CAGGTAGACCCAAACTCTCAGAA 59.421 47.826 0.00 0.00 36.42 3.02
453 454 3.835395 AGGTAGACCCAAACTCTCAGAAG 59.165 47.826 0.00 0.00 36.42 2.85
454 455 2.849294 AGACCCAAACTCTCAGAAGC 57.151 50.000 0.00 0.00 0.00 3.86
455 456 2.050144 AGACCCAAACTCTCAGAAGCA 58.950 47.619 0.00 0.00 0.00 3.91
456 457 2.439507 AGACCCAAACTCTCAGAAGCAA 59.560 45.455 0.00 0.00 0.00 3.91
457 458 3.073650 AGACCCAAACTCTCAGAAGCAAT 59.926 43.478 0.00 0.00 0.00 3.56
458 459 4.287067 AGACCCAAACTCTCAGAAGCAATA 59.713 41.667 0.00 0.00 0.00 1.90
459 460 4.583871 ACCCAAACTCTCAGAAGCAATAG 58.416 43.478 0.00 0.00 0.00 1.73
460 461 4.042187 ACCCAAACTCTCAGAAGCAATAGT 59.958 41.667 0.00 0.00 0.00 2.12
461 462 5.006386 CCCAAACTCTCAGAAGCAATAGTT 58.994 41.667 0.00 0.00 0.00 2.24
462 463 5.123027 CCCAAACTCTCAGAAGCAATAGTTC 59.877 44.000 0.00 0.00 0.00 3.01
463 464 5.123027 CCAAACTCTCAGAAGCAATAGTTCC 59.877 44.000 0.00 0.00 0.00 3.62
464 465 4.479786 ACTCTCAGAAGCAATAGTTCCC 57.520 45.455 0.00 0.00 0.00 3.97
465 466 3.198853 ACTCTCAGAAGCAATAGTTCCCC 59.801 47.826 0.00 0.00 0.00 4.81
466 467 2.505819 TCTCAGAAGCAATAGTTCCCCC 59.494 50.000 0.00 0.00 0.00 5.40
487 488 4.330250 CCCATTGTAATCCCTAGCATGAG 58.670 47.826 0.00 0.00 0.00 2.90
492 493 7.092891 CCATTGTAATCCCTAGCATGAGGTATA 60.093 40.741 0.00 0.00 34.45 1.47
519 520 6.861055 CCACCATGAATACAAACACAAAGTAC 59.139 38.462 0.00 0.00 0.00 2.73
534 535 0.663153 AGTACGACGCGGGGTATTAC 59.337 55.000 12.47 3.09 0.00 1.89
537 538 1.031571 ACGACGCGGGGTATTACTCA 61.032 55.000 12.47 0.00 0.00 3.41
540 541 0.313043 ACGCGGGGTATTACTCATCG 59.687 55.000 12.47 1.17 0.00 3.84
542 543 0.317479 GCGGGGTATTACTCATCGCT 59.683 55.000 9.29 0.00 38.82 4.93
543 544 1.542915 GCGGGGTATTACTCATCGCTA 59.457 52.381 9.29 0.00 38.82 4.26
551 552 0.185175 TACTCATCGCTAGAGGCCCA 59.815 55.000 0.00 0.00 37.43 5.36
559 560 0.328258 GCTAGAGGCCCAAACCTTGA 59.672 55.000 0.00 0.00 41.32 3.02
564 566 4.337264 AGAGGCCCAAACCTTGATAAAT 57.663 40.909 0.00 0.00 41.32 1.40
566 568 4.467438 AGAGGCCCAAACCTTGATAAATTG 59.533 41.667 0.00 0.00 41.32 2.32
575 577 8.087750 CCAAACCTTGATAAATTGTGTGTACAT 58.912 33.333 0.00 0.00 36.53 2.29
580 582 7.148188 CCTTGATAAATTGTGTGTACATGCTCT 60.148 37.037 0.00 0.00 36.53 4.09
581 583 7.075674 TGATAAATTGTGTGTACATGCTCTG 57.924 36.000 0.00 0.00 36.53 3.35
597 599 1.893801 CTCTGTTCTGGTACTTCCGGT 59.106 52.381 0.00 0.00 42.90 5.28
602 604 0.963962 TCTGGTACTTCCGGTCACAC 59.036 55.000 0.00 0.00 42.90 3.82
619 621 1.203100 ACACTTACCACCCTACCGAGT 60.203 52.381 0.00 0.00 0.00 4.18
626 628 1.615116 CCACCCTACCGAGTGTACTGA 60.615 57.143 0.00 0.00 31.88 3.41
638 640 4.623167 CGAGTGTACTGATGACTTTCCAAG 59.377 45.833 0.00 0.00 0.00 3.61
737 739 3.787146 GCAATGACGCACGCATTATTACA 60.787 43.478 10.70 0.00 34.41 2.41
743 745 2.529894 CGCACGCATTATTACAAAAGGC 59.470 45.455 0.00 0.00 0.00 4.35
764 766 8.677148 AAGGCGACATTATTTGACTACATATT 57.323 30.769 0.00 0.00 0.00 1.28
924 926 2.368548 TGGACAGTTGGATCCCATATCG 59.631 50.000 9.90 0.00 33.69 2.92
981 983 6.702329 CCCTCCCATACATACATTTAGAGTC 58.298 44.000 0.00 0.00 0.00 3.36
1187 1191 6.098266 TGTGAGACTATGCAACAGGTATGTAT 59.902 38.462 0.00 0.00 39.29 2.29
1408 1412 1.068588 GGATGTCCATCCGTCAATCGA 59.931 52.381 10.41 0.00 46.84 3.59
1465 1469 8.282592 CCGACGATGAACATATGTAATTGATTT 58.717 33.333 18.90 0.04 0.00 2.17
1480 1484 8.250332 TGTAATTGATTTTTGCATACTTCCTCC 58.750 33.333 0.00 0.00 0.00 4.30
1729 1777 7.490657 TTTACTAGATTGTTCAGCTTCCCTA 57.509 36.000 0.00 0.00 0.00 3.53
1905 1953 9.807649 ACTCATTTGCTTTCATGTATTAAATCC 57.192 29.630 0.00 0.00 0.00 3.01
2247 2296 0.472471 TTGTCACCACCAAGACTCCC 59.528 55.000 0.00 0.00 35.81 4.30
2302 2351 4.723789 TCAGGAGGATAAAGAAAGGAGCAT 59.276 41.667 0.00 0.00 0.00 3.79
2431 2480 7.224297 TGCTGATAACTAGAACCAAAGTTTCT 58.776 34.615 0.00 0.00 37.19 2.52
2473 2523 3.539604 CCAAGTCCTCAGCCTGAATAAG 58.460 50.000 0.00 0.00 0.00 1.73
2693 2746 8.863086 TCCACTGTGTTAACTACTTACTACATT 58.137 33.333 7.22 0.00 0.00 2.71
2751 2808 9.237187 TCATATTTAAATGACACAAGTGGCTTA 57.763 29.630 11.05 0.00 39.96 3.09
2822 2880 8.548721 GGTATTATAGTCCGTTGTTCAATTCAG 58.451 37.037 0.00 0.00 0.00 3.02
2885 2943 9.178758 GTTTGGTTCTTCATACTCAAAGGATAT 57.821 33.333 0.00 0.00 0.00 1.63
2917 2975 1.051812 ATAGGATGCAACTCCTCCCG 58.948 55.000 12.22 0.00 42.12 5.14
2959 3018 1.383456 CCCACACACACACACAAGGG 61.383 60.000 0.00 0.00 0.00 3.95
3020 3079 0.474854 TACCTTCCACCTCTTGGCCA 60.475 55.000 0.00 0.00 46.47 5.36
3116 3176 1.950909 TCACCGACAACATTTTCCACC 59.049 47.619 0.00 0.00 0.00 4.61
3160 3220 3.136992 ACCCGGTATTACCCCATAAACTG 59.863 47.826 7.29 0.00 33.75 3.16
3204 3264 4.631813 CGAAATACTTCTGGTTCCTCTTGG 59.368 45.833 0.00 0.00 0.00 3.61
3237 3297 8.961634 TCCGAATATTAATGAAACAATTCCACA 58.038 29.630 0.00 0.00 34.49 4.17
3248 3308 9.657419 ATGAAACAATTCCACAAATAAATCCTC 57.343 29.630 0.00 0.00 34.49 3.71
3249 3309 8.093927 TGAAACAATTCCACAAATAAATCCTCC 58.906 33.333 0.00 0.00 34.49 4.30
3253 3313 9.265862 ACAATTCCACAAATAAATCCTCCATAA 57.734 29.630 0.00 0.00 0.00 1.90
3257 3317 9.713684 TTCCACAAATAAATCCTCCATAATCTT 57.286 29.630 0.00 0.00 0.00 2.40
3346 3406 8.860088 TCATAGATATGAATGAAACTCCTTCGA 58.140 33.333 0.00 0.00 39.58 3.71
3354 3414 8.142994 TGAATGAAACTCCTTCGATTAATAGC 57.857 34.615 0.00 0.00 36.78 2.97
3367 3427 6.931838 TCGATTAATAGCCGATAGTGGAATT 58.068 36.000 0.00 0.00 0.00 2.17
3373 3433 2.439507 AGCCGATAGTGGAATTGTGGAT 59.560 45.455 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.839121 ACGTCTGTATTTGATGCCCTTTA 58.161 39.130 0.00 0.00 0.00 1.85
1 2 3.686016 ACGTCTGTATTTGATGCCCTTT 58.314 40.909 0.00 0.00 0.00 3.11
2 3 3.350219 ACGTCTGTATTTGATGCCCTT 57.650 42.857 0.00 0.00 0.00 3.95
3 4 3.350219 AACGTCTGTATTTGATGCCCT 57.650 42.857 0.00 0.00 0.00 5.19
4 5 4.814234 TCATAACGTCTGTATTTGATGCCC 59.186 41.667 0.00 0.00 0.00 5.36
5 6 5.523916 ACTCATAACGTCTGTATTTGATGCC 59.476 40.000 0.00 0.00 0.00 4.40
6 7 6.589830 ACTCATAACGTCTGTATTTGATGC 57.410 37.500 0.00 0.00 0.00 3.91
8 9 8.818057 GCTTTACTCATAACGTCTGTATTTGAT 58.182 33.333 0.00 0.00 0.00 2.57
9 10 8.033038 AGCTTTACTCATAACGTCTGTATTTGA 58.967 33.333 0.00 0.00 0.00 2.69
10 11 8.186178 AGCTTTACTCATAACGTCTGTATTTG 57.814 34.615 0.00 0.00 0.00 2.32
11 12 7.220300 CGAGCTTTACTCATAACGTCTGTATTT 59.780 37.037 0.00 0.00 46.63 1.40
12 13 6.691818 CGAGCTTTACTCATAACGTCTGTATT 59.308 38.462 0.00 0.00 46.63 1.89
13 14 6.200100 CGAGCTTTACTCATAACGTCTGTAT 58.800 40.000 0.00 0.00 46.63 2.29
14 15 5.566623 CGAGCTTTACTCATAACGTCTGTA 58.433 41.667 0.00 0.00 46.63 2.74
15 16 4.413087 CGAGCTTTACTCATAACGTCTGT 58.587 43.478 0.00 0.00 46.63 3.41
16 17 3.240861 GCGAGCTTTACTCATAACGTCTG 59.759 47.826 0.00 0.00 46.63 3.51
17 18 3.119602 TGCGAGCTTTACTCATAACGTCT 60.120 43.478 0.00 0.00 46.63 4.18
18 19 3.000971 GTGCGAGCTTTACTCATAACGTC 60.001 47.826 0.00 0.00 46.63 4.34
19 20 2.921754 GTGCGAGCTTTACTCATAACGT 59.078 45.455 0.00 0.00 46.63 3.99
20 21 2.281762 GGTGCGAGCTTTACTCATAACG 59.718 50.000 0.00 0.00 46.63 3.18
21 22 2.608090 GGGTGCGAGCTTTACTCATAAC 59.392 50.000 0.00 0.00 46.63 1.89
22 23 2.500098 AGGGTGCGAGCTTTACTCATAA 59.500 45.455 0.00 0.00 46.63 1.90
23 24 2.108168 AGGGTGCGAGCTTTACTCATA 58.892 47.619 0.00 0.00 46.63 2.15
24 25 0.905357 AGGGTGCGAGCTTTACTCAT 59.095 50.000 0.00 0.00 46.63 2.90
25 26 0.685097 AAGGGTGCGAGCTTTACTCA 59.315 50.000 0.00 0.00 46.63 3.41
26 27 1.809684 AAAGGGTGCGAGCTTTACTC 58.190 50.000 0.00 0.00 42.47 2.59
27 28 2.302157 AGTAAAGGGTGCGAGCTTTACT 59.698 45.455 2.77 2.77 43.51 2.24
28 29 2.696506 AGTAAAGGGTGCGAGCTTTAC 58.303 47.619 0.00 0.00 40.53 2.01
29 30 3.007614 AGAAGTAAAGGGTGCGAGCTTTA 59.992 43.478 0.00 0.00 0.00 1.85
30 31 2.152016 GAAGTAAAGGGTGCGAGCTTT 58.848 47.619 0.00 0.00 0.00 3.51
31 32 1.348036 AGAAGTAAAGGGTGCGAGCTT 59.652 47.619 0.00 0.00 0.00 3.74
32 33 0.977395 AGAAGTAAAGGGTGCGAGCT 59.023 50.000 0.00 0.00 0.00 4.09
33 34 1.360820 GAGAAGTAAAGGGTGCGAGC 58.639 55.000 0.00 0.00 0.00 5.03
34 35 1.275291 TGGAGAAGTAAAGGGTGCGAG 59.725 52.381 0.00 0.00 0.00 5.03
35 36 1.344065 TGGAGAAGTAAAGGGTGCGA 58.656 50.000 0.00 0.00 0.00 5.10
36 37 2.403252 ATGGAGAAGTAAAGGGTGCG 57.597 50.000 0.00 0.00 0.00 5.34
37 38 5.105877 GGTTAAATGGAGAAGTAAAGGGTGC 60.106 44.000 0.00 0.00 0.00 5.01
38 39 5.417894 GGGTTAAATGGAGAAGTAAAGGGTG 59.582 44.000 0.00 0.00 0.00 4.61
39 40 5.315109 AGGGTTAAATGGAGAAGTAAAGGGT 59.685 40.000 0.00 0.00 0.00 4.34
40 41 5.827756 AGGGTTAAATGGAGAAGTAAAGGG 58.172 41.667 0.00 0.00 0.00 3.95
41 42 6.152831 CCAAGGGTTAAATGGAGAAGTAAAGG 59.847 42.308 0.00 0.00 36.27 3.11
42 43 6.152831 CCCAAGGGTTAAATGGAGAAGTAAAG 59.847 42.308 0.00 0.00 36.27 1.85
43 44 6.014012 CCCAAGGGTTAAATGGAGAAGTAAA 58.986 40.000 0.00 0.00 36.27 2.01
44 45 5.576128 CCCAAGGGTTAAATGGAGAAGTAA 58.424 41.667 0.00 0.00 36.27 2.24
45 46 5.187621 CCCAAGGGTTAAATGGAGAAGTA 57.812 43.478 0.00 0.00 36.27 2.24
46 47 4.047627 CCCAAGGGTTAAATGGAGAAGT 57.952 45.455 0.00 0.00 36.27 3.01
57 58 8.998676 GTGAATGCCTCATTACCCAAGGGTTA 62.999 46.154 17.31 7.91 42.02 2.85
59 60 6.943825 GTGAATGCCTCATTACCCAAGGGT 62.944 50.000 16.26 16.26 43.41 4.34
60 61 2.310538 GAATGCCTCATTACCCAAGGG 58.689 52.381 2.91 2.91 33.90 3.95
61 62 2.689983 GTGAATGCCTCATTACCCAAGG 59.310 50.000 0.00 0.00 36.14 3.61
62 63 2.355756 CGTGAATGCCTCATTACCCAAG 59.644 50.000 0.00 0.00 36.14 3.61
63 64 2.026729 TCGTGAATGCCTCATTACCCAA 60.027 45.455 0.00 0.00 36.14 4.12
64 65 1.557371 TCGTGAATGCCTCATTACCCA 59.443 47.619 0.00 0.00 36.14 4.51
65 66 2.213499 CTCGTGAATGCCTCATTACCC 58.787 52.381 0.00 0.00 36.14 3.69
66 67 2.213499 CCTCGTGAATGCCTCATTACC 58.787 52.381 0.00 0.00 36.14 2.85
67 68 2.213499 CCCTCGTGAATGCCTCATTAC 58.787 52.381 0.00 0.00 36.14 1.89
68 69 1.140852 CCCCTCGTGAATGCCTCATTA 59.859 52.381 0.00 0.00 36.14 1.90
69 70 0.107017 CCCCTCGTGAATGCCTCATT 60.107 55.000 0.00 0.00 36.14 2.57
70 71 0.982852 TCCCCTCGTGAATGCCTCAT 60.983 55.000 0.00 0.00 36.14 2.90
71 72 1.612146 TCCCCTCGTGAATGCCTCA 60.612 57.895 0.00 0.00 0.00 3.86
72 73 1.153349 GTCCCCTCGTGAATGCCTC 60.153 63.158 0.00 0.00 0.00 4.70
73 74 1.274703 ATGTCCCCTCGTGAATGCCT 61.275 55.000 0.00 0.00 0.00 4.75
74 75 0.468226 TATGTCCCCTCGTGAATGCC 59.532 55.000 0.00 0.00 0.00 4.40
75 76 2.158957 TCTTATGTCCCCTCGTGAATGC 60.159 50.000 0.00 0.00 0.00 3.56
76 77 3.133003 AGTCTTATGTCCCCTCGTGAATG 59.867 47.826 0.00 0.00 0.00 2.67
77 78 3.375699 AGTCTTATGTCCCCTCGTGAAT 58.624 45.455 0.00 0.00 0.00 2.57
78 79 2.758979 GAGTCTTATGTCCCCTCGTGAA 59.241 50.000 0.00 0.00 0.00 3.18
79 80 2.025226 AGAGTCTTATGTCCCCTCGTGA 60.025 50.000 0.00 0.00 0.00 4.35
80 81 2.379972 AGAGTCTTATGTCCCCTCGTG 58.620 52.381 0.00 0.00 0.00 4.35
81 82 2.830651 AGAGTCTTATGTCCCCTCGT 57.169 50.000 0.00 0.00 0.00 4.18
82 83 7.201750 GCTTATATAGAGTCTTATGTCCCCTCG 60.202 44.444 0.00 0.00 0.00 4.63
83 84 7.068962 GGCTTATATAGAGTCTTATGTCCCCTC 59.931 44.444 0.00 0.00 0.00 4.30
84 85 6.898521 GGCTTATATAGAGTCTTATGTCCCCT 59.101 42.308 0.00 0.00 0.00 4.79
85 86 6.668283 TGGCTTATATAGAGTCTTATGTCCCC 59.332 42.308 0.00 0.00 0.00 4.81
86 87 7.363968 GGTGGCTTATATAGAGTCTTATGTCCC 60.364 44.444 0.00 0.00 0.00 4.46
87 88 7.363968 GGGTGGCTTATATAGAGTCTTATGTCC 60.364 44.444 0.00 1.63 0.00 4.02
88 89 7.363968 GGGGTGGCTTATATAGAGTCTTATGTC 60.364 44.444 0.00 0.00 0.00 3.06
89 90 6.440965 GGGGTGGCTTATATAGAGTCTTATGT 59.559 42.308 0.00 0.00 0.00 2.29
90 91 6.670027 AGGGGTGGCTTATATAGAGTCTTATG 59.330 42.308 0.00 0.00 0.00 1.90
91 92 6.816960 AGGGGTGGCTTATATAGAGTCTTAT 58.183 40.000 0.00 0.00 0.00 1.73
92 93 6.046881 AGAGGGGTGGCTTATATAGAGTCTTA 59.953 42.308 0.00 0.00 0.00 2.10
93 94 5.088026 GAGGGGTGGCTTATATAGAGTCTT 58.912 45.833 0.00 0.00 0.00 3.01
94 95 4.358614 AGAGGGGTGGCTTATATAGAGTCT 59.641 45.833 0.00 0.00 0.00 3.24
95 96 4.464597 CAGAGGGGTGGCTTATATAGAGTC 59.535 50.000 0.00 0.00 0.00 3.36
96 97 4.421131 CAGAGGGGTGGCTTATATAGAGT 58.579 47.826 0.00 0.00 0.00 3.24
97 98 3.196685 GCAGAGGGGTGGCTTATATAGAG 59.803 52.174 0.00 0.00 0.00 2.43
98 99 3.173965 GCAGAGGGGTGGCTTATATAGA 58.826 50.000 0.00 0.00 0.00 1.98
99 100 3.177228 AGCAGAGGGGTGGCTTATATAG 58.823 50.000 0.00 0.00 33.21 1.31
100 101 3.173965 GAGCAGAGGGGTGGCTTATATA 58.826 50.000 0.00 0.00 38.15 0.86
101 102 1.981495 GAGCAGAGGGGTGGCTTATAT 59.019 52.381 0.00 0.00 38.15 0.86
102 103 1.424638 GAGCAGAGGGGTGGCTTATA 58.575 55.000 0.00 0.00 38.15 0.98
103 104 1.348775 GGAGCAGAGGGGTGGCTTAT 61.349 60.000 0.00 0.00 38.15 1.73
104 105 1.995626 GGAGCAGAGGGGTGGCTTA 60.996 63.158 0.00 0.00 38.15 3.09
105 106 2.477190 TAGGAGCAGAGGGGTGGCTT 62.477 60.000 0.00 0.00 38.15 4.35
106 107 2.948382 TAGGAGCAGAGGGGTGGCT 61.948 63.158 0.00 0.00 41.35 4.75
107 108 2.365635 TAGGAGCAGAGGGGTGGC 60.366 66.667 0.00 0.00 0.00 5.01
108 109 1.306141 TGTAGGAGCAGAGGGGTGG 60.306 63.158 0.00 0.00 0.00 4.61
109 110 0.904865 TGTGTAGGAGCAGAGGGGTG 60.905 60.000 0.00 0.00 0.00 4.61
110 111 0.178903 TTGTGTAGGAGCAGAGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
111 112 0.539051 CTTGTGTAGGAGCAGAGGGG 59.461 60.000 0.00 0.00 0.00 4.79
121 122 0.872388 GTTGCGAACCCTTGTGTAGG 59.128 55.000 0.00 0.00 44.33 3.18
122 123 0.872388 GGTTGCGAACCCTTGTGTAG 59.128 55.000 6.76 0.00 46.12 2.74
123 124 3.009612 GGTTGCGAACCCTTGTGTA 57.990 52.632 6.76 0.00 46.12 2.90
124 125 3.836151 GGTTGCGAACCCTTGTGT 58.164 55.556 6.76 0.00 46.12 3.72
132 133 4.868171 TGATGTGTTATAGAGGTTGCGAAC 59.132 41.667 0.00 0.00 0.00 3.95
133 134 4.868171 GTGATGTGTTATAGAGGTTGCGAA 59.132 41.667 0.00 0.00 0.00 4.70
134 135 4.081917 TGTGATGTGTTATAGAGGTTGCGA 60.082 41.667 0.00 0.00 0.00 5.10
135 136 4.032900 GTGTGATGTGTTATAGAGGTTGCG 59.967 45.833 0.00 0.00 0.00 4.85
136 137 4.935205 TGTGTGATGTGTTATAGAGGTTGC 59.065 41.667 0.00 0.00 0.00 4.17
137 138 6.166279 AGTGTGTGATGTGTTATAGAGGTTG 58.834 40.000 0.00 0.00 0.00 3.77
138 139 6.360370 AGTGTGTGATGTGTTATAGAGGTT 57.640 37.500 0.00 0.00 0.00 3.50
139 140 7.661536 ATAGTGTGTGATGTGTTATAGAGGT 57.338 36.000 0.00 0.00 0.00 3.85
140 141 9.684448 CTTATAGTGTGTGATGTGTTATAGAGG 57.316 37.037 0.00 0.00 0.00 3.69
145 146 8.883731 GCTTTCTTATAGTGTGTGATGTGTTAT 58.116 33.333 0.00 0.00 0.00 1.89
146 147 8.094548 AGCTTTCTTATAGTGTGTGATGTGTTA 58.905 33.333 0.00 0.00 0.00 2.41
147 148 6.936900 AGCTTTCTTATAGTGTGTGATGTGTT 59.063 34.615 0.00 0.00 0.00 3.32
148 149 6.467677 AGCTTTCTTATAGTGTGTGATGTGT 58.532 36.000 0.00 0.00 0.00 3.72
149 150 6.036517 GGAGCTTTCTTATAGTGTGTGATGTG 59.963 42.308 0.00 0.00 0.00 3.21
150 151 6.070538 AGGAGCTTTCTTATAGTGTGTGATGT 60.071 38.462 0.00 0.00 0.00 3.06
151 152 6.257411 CAGGAGCTTTCTTATAGTGTGTGATG 59.743 42.308 0.00 0.00 0.00 3.07
152 153 6.344500 CAGGAGCTTTCTTATAGTGTGTGAT 58.656 40.000 0.00 0.00 0.00 3.06
153 154 5.724328 CAGGAGCTTTCTTATAGTGTGTGA 58.276 41.667 0.00 0.00 0.00 3.58
154 155 4.331168 GCAGGAGCTTTCTTATAGTGTGTG 59.669 45.833 0.00 0.00 37.91 3.82
155 156 4.508662 GCAGGAGCTTTCTTATAGTGTGT 58.491 43.478 0.00 0.00 37.91 3.72
156 157 3.553511 CGCAGGAGCTTTCTTATAGTGTG 59.446 47.826 0.00 0.00 39.10 3.82
157 158 3.786635 CGCAGGAGCTTTCTTATAGTGT 58.213 45.455 0.00 0.00 39.10 3.55
178 179 4.309950 ACCCAACGTCTCGGTGCC 62.310 66.667 1.46 0.00 43.82 5.01
179 180 2.737376 GACCCAACGTCTCGGTGC 60.737 66.667 5.94 0.00 43.82 5.01
186 187 1.202382 CGGAATAGGAGACCCAACGTC 60.202 57.143 0.00 0.00 42.32 4.34
187 188 0.822164 CGGAATAGGAGACCCAACGT 59.178 55.000 0.00 0.00 33.88 3.99
188 189 1.067212 CTCGGAATAGGAGACCCAACG 59.933 57.143 0.00 0.00 33.27 4.10
189 190 2.362717 CTCTCGGAATAGGAGACCCAAC 59.637 54.545 0.00 0.00 35.70 3.77
190 191 2.667470 CTCTCGGAATAGGAGACCCAA 58.333 52.381 0.00 0.00 35.70 4.12
191 192 1.133450 CCTCTCGGAATAGGAGACCCA 60.133 57.143 0.71 0.00 35.70 4.51
192 193 1.623163 CCTCTCGGAATAGGAGACCC 58.377 60.000 0.71 0.00 35.70 4.46
193 194 1.133419 ACCCTCTCGGAATAGGAGACC 60.133 57.143 7.47 0.00 35.70 3.85
194 195 2.232399 GACCCTCTCGGAATAGGAGAC 58.768 57.143 7.47 0.00 35.70 3.36
195 196 1.145325 GGACCCTCTCGGAATAGGAGA 59.855 57.143 7.47 0.00 38.18 3.71
196 197 1.146152 AGGACCCTCTCGGAATAGGAG 59.854 57.143 7.47 0.00 34.58 3.69
197 198 1.133450 CAGGACCCTCTCGGAATAGGA 60.133 57.143 7.47 0.00 34.58 2.94
198 199 1.133450 TCAGGACCCTCTCGGAATAGG 60.133 57.143 0.00 0.10 34.64 2.57
199 200 2.362717 GTTCAGGACCCTCTCGGAATAG 59.637 54.545 0.00 0.00 34.64 1.73
200 201 2.024273 AGTTCAGGACCCTCTCGGAATA 60.024 50.000 0.00 0.00 34.64 1.75
201 202 1.196012 GTTCAGGACCCTCTCGGAAT 58.804 55.000 0.00 0.00 34.64 3.01
202 203 0.114560 AGTTCAGGACCCTCTCGGAA 59.885 55.000 0.00 0.00 34.64 4.30
203 204 0.323542 GAGTTCAGGACCCTCTCGGA 60.324 60.000 0.00 0.00 34.64 4.55
204 205 1.658686 CGAGTTCAGGACCCTCTCGG 61.659 65.000 14.33 1.53 42.45 4.63
205 206 1.803943 CGAGTTCAGGACCCTCTCG 59.196 63.158 10.06 10.06 41.02 4.04
206 207 2.125773 TACGAGTTCAGGACCCTCTC 57.874 55.000 0.00 0.00 0.00 3.20
207 208 2.599408 TTACGAGTTCAGGACCCTCT 57.401 50.000 0.00 0.00 0.00 3.69
208 209 3.430513 GGATTTACGAGTTCAGGACCCTC 60.431 52.174 0.00 0.00 0.00 4.30
209 210 2.500504 GGATTTACGAGTTCAGGACCCT 59.499 50.000 0.00 0.00 0.00 4.34
210 211 2.500504 AGGATTTACGAGTTCAGGACCC 59.499 50.000 0.00 0.00 0.00 4.46
211 212 3.889520 AGGATTTACGAGTTCAGGACC 57.110 47.619 0.00 0.00 0.00 4.46
212 213 5.105837 ACACTAGGATTTACGAGTTCAGGAC 60.106 44.000 0.00 0.00 0.00 3.85
213 214 5.014858 ACACTAGGATTTACGAGTTCAGGA 58.985 41.667 0.00 0.00 0.00 3.86
214 215 5.326200 ACACTAGGATTTACGAGTTCAGG 57.674 43.478 0.00 0.00 0.00 3.86
215 216 6.849502 TGTACACTAGGATTTACGAGTTCAG 58.150 40.000 0.00 0.00 0.00 3.02
216 217 6.822667 TGTACACTAGGATTTACGAGTTCA 57.177 37.500 0.00 0.00 0.00 3.18
217 218 6.529477 GGTTGTACACTAGGATTTACGAGTTC 59.471 42.308 0.00 0.00 0.00 3.01
218 219 6.015180 TGGTTGTACACTAGGATTTACGAGTT 60.015 38.462 0.00 0.00 0.00 3.01
219 220 5.477984 TGGTTGTACACTAGGATTTACGAGT 59.522 40.000 0.00 0.00 0.00 4.18
220 221 5.803967 GTGGTTGTACACTAGGATTTACGAG 59.196 44.000 0.00 0.00 38.32 4.18
221 222 5.243507 TGTGGTTGTACACTAGGATTTACGA 59.756 40.000 0.00 0.00 41.84 3.43
222 223 5.346822 GTGTGGTTGTACACTAGGATTTACG 59.653 44.000 0.00 0.00 45.70 3.18
223 224 6.716898 GTGTGGTTGTACACTAGGATTTAC 57.283 41.667 0.00 0.00 45.70 2.01
234 235 4.081862 GTCTAGCTATGGTGTGGTTGTACA 60.082 45.833 0.00 0.00 0.00 2.90
235 236 4.159879 AGTCTAGCTATGGTGTGGTTGTAC 59.840 45.833 0.00 0.00 0.00 2.90
236 237 4.350245 AGTCTAGCTATGGTGTGGTTGTA 58.650 43.478 0.00 0.00 0.00 2.41
237 238 3.173965 AGTCTAGCTATGGTGTGGTTGT 58.826 45.455 0.00 0.00 0.00 3.32
238 239 3.449018 AGAGTCTAGCTATGGTGTGGTTG 59.551 47.826 0.00 0.00 0.00 3.77
239 240 3.449018 CAGAGTCTAGCTATGGTGTGGTT 59.551 47.826 0.00 0.00 33.06 3.67
240 241 3.027412 CAGAGTCTAGCTATGGTGTGGT 58.973 50.000 0.00 0.00 33.06 4.16
241 242 2.223923 GCAGAGTCTAGCTATGGTGTGG 60.224 54.545 0.00 0.00 36.95 4.17
242 243 2.223923 GGCAGAGTCTAGCTATGGTGTG 60.224 54.545 12.36 0.00 36.95 3.82
243 244 2.035632 GGCAGAGTCTAGCTATGGTGT 58.964 52.381 12.36 0.00 36.95 4.16
244 245 1.342819 GGGCAGAGTCTAGCTATGGTG 59.657 57.143 12.36 0.00 36.95 4.17
245 246 1.219213 AGGGCAGAGTCTAGCTATGGT 59.781 52.381 12.36 0.00 36.95 3.55
246 247 1.892474 GAGGGCAGAGTCTAGCTATGG 59.108 57.143 12.36 0.00 36.95 2.74
247 248 2.819608 GAGAGGGCAGAGTCTAGCTATG 59.180 54.545 12.36 4.93 39.31 2.23
248 249 2.445145 TGAGAGGGCAGAGTCTAGCTAT 59.555 50.000 12.36 4.14 0.00 2.97
249 250 1.847088 TGAGAGGGCAGAGTCTAGCTA 59.153 52.381 12.36 0.00 0.00 3.32
250 251 0.628522 TGAGAGGGCAGAGTCTAGCT 59.371 55.000 12.36 0.00 0.00 3.32
251 252 1.703411 ATGAGAGGGCAGAGTCTAGC 58.297 55.000 0.00 0.00 0.00 3.42
252 253 2.811431 CGTATGAGAGGGCAGAGTCTAG 59.189 54.545 0.00 0.00 0.00 2.43
253 254 2.172930 ACGTATGAGAGGGCAGAGTCTA 59.827 50.000 0.00 0.00 0.00 2.59
254 255 1.064314 ACGTATGAGAGGGCAGAGTCT 60.064 52.381 0.00 0.00 0.00 3.24
255 256 1.394618 ACGTATGAGAGGGCAGAGTC 58.605 55.000 0.00 0.00 0.00 3.36
256 257 2.299521 GTACGTATGAGAGGGCAGAGT 58.700 52.381 0.00 0.00 0.00 3.24
257 258 1.609555 GGTACGTATGAGAGGGCAGAG 59.390 57.143 0.00 0.00 0.00 3.35
258 259 1.688772 GGTACGTATGAGAGGGCAGA 58.311 55.000 0.00 0.00 0.00 4.26
259 260 0.674534 GGGTACGTATGAGAGGGCAG 59.325 60.000 0.00 0.00 0.00 4.85
260 261 0.757935 GGGGTACGTATGAGAGGGCA 60.758 60.000 0.00 0.00 0.00 5.36
261 262 1.470165 GGGGGTACGTATGAGAGGGC 61.470 65.000 0.00 0.00 0.00 5.19
262 263 0.105862 TGGGGGTACGTATGAGAGGG 60.106 60.000 0.00 0.00 0.00 4.30
263 264 2.011122 ATGGGGGTACGTATGAGAGG 57.989 55.000 0.00 0.00 0.00 3.69
264 265 3.231818 AGAATGGGGGTACGTATGAGAG 58.768 50.000 0.00 0.00 0.00 3.20
265 266 3.117246 AGAGAATGGGGGTACGTATGAGA 60.117 47.826 0.00 0.00 0.00 3.27
266 267 3.231818 AGAGAATGGGGGTACGTATGAG 58.768 50.000 0.00 0.00 0.00 2.90
267 268 3.323774 AGAGAATGGGGGTACGTATGA 57.676 47.619 0.00 0.00 0.00 2.15
268 269 4.150359 AGTAGAGAATGGGGGTACGTATG 58.850 47.826 0.00 0.00 0.00 2.39
269 270 4.466255 AGTAGAGAATGGGGGTACGTAT 57.534 45.455 0.00 0.00 0.00 3.06
270 271 3.959495 AGTAGAGAATGGGGGTACGTA 57.041 47.619 0.00 0.00 0.00 3.57
271 272 2.842645 AGTAGAGAATGGGGGTACGT 57.157 50.000 0.00 0.00 0.00 3.57
272 273 3.449737 TGAAAGTAGAGAATGGGGGTACG 59.550 47.826 0.00 0.00 0.00 3.67
273 274 4.715297 TCTGAAAGTAGAGAATGGGGGTAC 59.285 45.833 0.00 0.00 33.76 3.34
274 275 4.955335 TCTGAAAGTAGAGAATGGGGGTA 58.045 43.478 0.00 0.00 33.76 3.69
275 276 3.803340 TCTGAAAGTAGAGAATGGGGGT 58.197 45.455 0.00 0.00 33.76 4.95
276 277 4.657969 AGATCTGAAAGTAGAGAATGGGGG 59.342 45.833 0.00 0.00 33.76 5.40
277 278 5.130145 ACAGATCTGAAAGTAGAGAATGGGG 59.870 44.000 29.27 0.00 33.76 4.96
278 279 6.232581 ACAGATCTGAAAGTAGAGAATGGG 57.767 41.667 29.27 0.00 33.76 4.00
279 280 6.760770 GGAACAGATCTGAAAGTAGAGAATGG 59.239 42.308 29.27 0.00 33.76 3.16
280 281 6.760770 GGGAACAGATCTGAAAGTAGAGAATG 59.239 42.308 29.27 0.00 33.76 2.67
281 282 6.441924 TGGGAACAGATCTGAAAGTAGAGAAT 59.558 38.462 29.27 0.00 35.01 2.40
282 283 5.780282 TGGGAACAGATCTGAAAGTAGAGAA 59.220 40.000 29.27 1.47 35.01 2.87
283 284 5.186021 GTGGGAACAGATCTGAAAGTAGAGA 59.814 44.000 29.27 1.12 44.46 3.10
284 285 5.415221 GTGGGAACAGATCTGAAAGTAGAG 58.585 45.833 29.27 0.00 44.46 2.43
285 286 4.082190 CGTGGGAACAGATCTGAAAGTAGA 60.082 45.833 29.27 3.87 44.46 2.59
286 287 4.082190 TCGTGGGAACAGATCTGAAAGTAG 60.082 45.833 29.27 13.55 44.46 2.57
287 288 3.830178 TCGTGGGAACAGATCTGAAAGTA 59.170 43.478 29.27 9.38 44.46 2.24
288 289 2.632996 TCGTGGGAACAGATCTGAAAGT 59.367 45.455 29.27 10.81 44.46 2.66
289 290 2.996621 GTCGTGGGAACAGATCTGAAAG 59.003 50.000 29.27 12.02 44.46 2.62
290 291 2.367241 TGTCGTGGGAACAGATCTGAAA 59.633 45.455 29.27 6.60 44.46 2.69
291 292 1.967779 TGTCGTGGGAACAGATCTGAA 59.032 47.619 29.27 6.26 44.46 3.02
292 293 1.272490 GTGTCGTGGGAACAGATCTGA 59.728 52.381 29.27 3.06 44.46 3.27
293 294 1.000843 TGTGTCGTGGGAACAGATCTG 59.999 52.381 21.37 21.37 44.46 2.90
294 295 1.338107 TGTGTCGTGGGAACAGATCT 58.662 50.000 0.00 0.00 44.46 2.75
295 296 2.386661 ATGTGTCGTGGGAACAGATC 57.613 50.000 0.00 0.00 44.46 2.75
296 297 2.832129 AGTATGTGTCGTGGGAACAGAT 59.168 45.455 0.00 0.00 44.46 2.90
297 298 2.244695 AGTATGTGTCGTGGGAACAGA 58.755 47.619 0.00 0.00 44.46 3.41
298 299 2.736721 CAAGTATGTGTCGTGGGAACAG 59.263 50.000 0.00 0.00 44.46 3.16
299 300 2.549134 CCAAGTATGTGTCGTGGGAACA 60.549 50.000 0.00 0.00 38.70 3.18
300 301 2.073816 CCAAGTATGTGTCGTGGGAAC 58.926 52.381 0.00 0.00 32.40 3.62
301 302 1.609580 GCCAAGTATGTGTCGTGGGAA 60.610 52.381 0.00 0.00 35.57 3.97
302 303 0.036765 GCCAAGTATGTGTCGTGGGA 60.037 55.000 0.00 0.00 35.57 4.37
303 304 1.024579 GGCCAAGTATGTGTCGTGGG 61.025 60.000 0.00 0.00 35.57 4.61
304 305 1.024579 GGGCCAAGTATGTGTCGTGG 61.025 60.000 4.39 0.00 37.47 4.94
305 306 1.024579 GGGGCCAAGTATGTGTCGTG 61.025 60.000 4.39 0.00 0.00 4.35
306 307 1.298667 GGGGCCAAGTATGTGTCGT 59.701 57.895 4.39 0.00 0.00 4.34
307 308 1.451387 GGGGGCCAAGTATGTGTCG 60.451 63.158 4.39 0.00 0.00 4.35
308 309 0.039035 TTGGGGGCCAAGTATGTGTC 59.961 55.000 4.39 0.00 38.75 3.67
309 310 2.169106 TTGGGGGCCAAGTATGTGT 58.831 52.632 4.39 0.00 38.75 3.72
317 318 2.855770 ATGCTGACTTGGGGGCCAA 61.856 57.895 4.39 0.00 41.69 4.52
318 319 3.267233 ATGCTGACTTGGGGGCCA 61.267 61.111 4.39 0.00 0.00 5.36
319 320 2.757099 CATGCTGACTTGGGGGCC 60.757 66.667 0.00 0.00 0.00 5.80
320 321 2.757099 CCATGCTGACTTGGGGGC 60.757 66.667 0.00 0.00 37.44 5.80
321 322 1.679977 CACCATGCTGACTTGGGGG 60.680 63.158 3.41 0.00 43.75 5.40
322 323 1.679977 CCACCATGCTGACTTGGGG 60.680 63.158 3.41 0.00 43.75 4.96
323 324 0.679002 CTCCACCATGCTGACTTGGG 60.679 60.000 3.41 0.00 43.75 4.12
324 325 0.679002 CCTCCACCATGCTGACTTGG 60.679 60.000 0.00 0.00 44.74 3.61
325 326 0.037303 ACCTCCACCATGCTGACTTG 59.963 55.000 0.00 0.00 0.00 3.16
326 327 0.326264 GACCTCCACCATGCTGACTT 59.674 55.000 0.00 0.00 0.00 3.01
327 328 0.837691 TGACCTCCACCATGCTGACT 60.838 55.000 0.00 0.00 0.00 3.41
328 329 0.036732 TTGACCTCCACCATGCTGAC 59.963 55.000 0.00 0.00 0.00 3.51
329 330 0.325933 CTTGACCTCCACCATGCTGA 59.674 55.000 0.00 0.00 0.00 4.26
330 331 0.325933 TCTTGACCTCCACCATGCTG 59.674 55.000 0.00 0.00 0.00 4.41
331 332 1.293062 ATCTTGACCTCCACCATGCT 58.707 50.000 0.00 0.00 0.00 3.79
332 333 1.747355 CAATCTTGACCTCCACCATGC 59.253 52.381 0.00 0.00 0.00 4.06
333 334 2.025981 TCCAATCTTGACCTCCACCATG 60.026 50.000 0.00 0.00 0.00 3.66
334 335 2.278245 TCCAATCTTGACCTCCACCAT 58.722 47.619 0.00 0.00 0.00 3.55
335 336 1.741028 TCCAATCTTGACCTCCACCA 58.259 50.000 0.00 0.00 0.00 4.17
336 337 2.507471 AGATCCAATCTTGACCTCCACC 59.493 50.000 0.00 0.00 35.76 4.61
337 338 3.922171 AGATCCAATCTTGACCTCCAC 57.078 47.619 0.00 0.00 35.76 4.02
338 339 3.711704 GGTAGATCCAATCTTGACCTCCA 59.288 47.826 0.00 0.00 40.76 3.86
339 340 3.970640 AGGTAGATCCAATCTTGACCTCC 59.029 47.826 5.84 0.00 42.10 4.30
341 342 4.624913 TGAGGTAGATCCAATCTTGACCT 58.375 43.478 9.99 9.99 46.19 3.85
342 343 5.163258 ACATGAGGTAGATCCAATCTTGACC 60.163 44.000 0.00 0.00 40.76 4.02
343 344 5.923204 ACATGAGGTAGATCCAATCTTGAC 58.077 41.667 0.00 0.00 40.76 3.18
344 345 7.675161 TTACATGAGGTAGATCCAATCTTGA 57.325 36.000 0.00 0.00 40.76 3.02
345 346 8.616076 GTTTTACATGAGGTAGATCCAATCTTG 58.384 37.037 0.00 0.00 40.76 3.02
346 347 7.775561 GGTTTTACATGAGGTAGATCCAATCTT 59.224 37.037 0.00 0.00 40.76 2.40
347 348 7.283329 GGTTTTACATGAGGTAGATCCAATCT 58.717 38.462 0.00 0.00 43.33 2.40
348 349 6.486993 GGGTTTTACATGAGGTAGATCCAATC 59.513 42.308 0.00 0.00 39.02 2.67
349 350 6.160459 AGGGTTTTACATGAGGTAGATCCAAT 59.840 38.462 0.00 0.00 39.02 3.16
350 351 5.491078 AGGGTTTTACATGAGGTAGATCCAA 59.509 40.000 0.00 0.00 39.02 3.53
351 352 5.036916 AGGGTTTTACATGAGGTAGATCCA 58.963 41.667 0.00 0.00 39.02 3.41
352 353 5.632034 AGGGTTTTACATGAGGTAGATCC 57.368 43.478 0.00 0.00 32.49 3.36
353 354 6.224584 GCTAGGGTTTTACATGAGGTAGATC 58.775 44.000 0.00 0.00 32.49 2.75
354 355 5.221461 CGCTAGGGTTTTACATGAGGTAGAT 60.221 44.000 0.00 0.00 32.49 1.98
355 356 4.098960 CGCTAGGGTTTTACATGAGGTAGA 59.901 45.833 0.00 0.00 32.49 2.59
356 357 4.369182 CGCTAGGGTTTTACATGAGGTAG 58.631 47.826 0.00 0.00 32.49 3.18
357 358 3.431207 GCGCTAGGGTTTTACATGAGGTA 60.431 47.826 8.77 0.00 0.00 3.08
358 359 2.679930 GCGCTAGGGTTTTACATGAGGT 60.680 50.000 8.77 0.00 0.00 3.85
359 360 1.940613 GCGCTAGGGTTTTACATGAGG 59.059 52.381 8.77 0.00 0.00 3.86
360 361 1.593006 CGCGCTAGGGTTTTACATGAG 59.407 52.381 5.56 0.00 0.00 2.90
361 362 1.066716 ACGCGCTAGGGTTTTACATGA 60.067 47.619 5.73 0.00 40.95 3.07
362 363 1.365699 ACGCGCTAGGGTTTTACATG 58.634 50.000 5.73 0.00 40.95 3.21
363 364 2.543641 GTACGCGCTAGGGTTTTACAT 58.456 47.619 5.73 0.00 43.60 2.29
364 365 1.404047 GGTACGCGCTAGGGTTTTACA 60.404 52.381 5.73 0.00 43.60 2.41
365 366 1.280982 GGTACGCGCTAGGGTTTTAC 58.719 55.000 5.73 7.23 43.60 2.01
366 367 3.739077 GGTACGCGCTAGGGTTTTA 57.261 52.632 5.73 0.00 43.60 1.52
367 368 4.604114 GGTACGCGCTAGGGTTTT 57.396 55.556 5.73 0.00 43.60 2.43
380 381 3.181483 CCCTCACCTTACATGTACGGTAC 60.181 52.174 28.08 11.33 35.77 3.34
381 382 3.025978 CCCTCACCTTACATGTACGGTA 58.974 50.000 28.08 17.38 35.77 4.02
382 383 1.829222 CCCTCACCTTACATGTACGGT 59.171 52.381 24.42 24.42 38.09 4.83
383 384 1.472728 GCCCTCACCTTACATGTACGG 60.473 57.143 23.19 23.19 0.00 4.02
384 385 1.480954 AGCCCTCACCTTACATGTACG 59.519 52.381 4.68 3.42 0.00 3.67
385 386 4.503296 CCATAGCCCTCACCTTACATGTAC 60.503 50.000 4.68 0.00 0.00 2.90
386 387 3.646162 CCATAGCCCTCACCTTACATGTA 59.354 47.826 0.08 0.08 0.00 2.29
387 388 2.439507 CCATAGCCCTCACCTTACATGT 59.560 50.000 2.69 2.69 0.00 3.21
388 389 2.224621 CCCATAGCCCTCACCTTACATG 60.225 54.545 0.00 0.00 0.00 3.21
389 390 2.057922 CCCATAGCCCTCACCTTACAT 58.942 52.381 0.00 0.00 0.00 2.29
390 391 1.507140 CCCATAGCCCTCACCTTACA 58.493 55.000 0.00 0.00 0.00 2.41
391 392 0.765510 CCCCATAGCCCTCACCTTAC 59.234 60.000 0.00 0.00 0.00 2.34
392 393 0.401395 CCCCCATAGCCCTCACCTTA 60.401 60.000 0.00 0.00 0.00 2.69
393 394 1.697754 CCCCCATAGCCCTCACCTT 60.698 63.158 0.00 0.00 0.00 3.50
394 395 2.039405 CCCCCATAGCCCTCACCT 60.039 66.667 0.00 0.00 0.00 4.00
395 396 3.890926 GCCCCCATAGCCCTCACC 61.891 72.222 0.00 0.00 0.00 4.02
396 397 2.774351 AGCCCCCATAGCCCTCAC 60.774 66.667 0.00 0.00 0.00 3.51
397 398 2.448542 GAGCCCCCATAGCCCTCA 60.449 66.667 0.00 0.00 0.00 3.86
398 399 0.473886 TAAGAGCCCCCATAGCCCTC 60.474 60.000 0.00 0.00 0.00 4.30
399 400 0.474660 CTAAGAGCCCCCATAGCCCT 60.475 60.000 0.00 0.00 0.00 5.19
400 401 0.473886 TCTAAGAGCCCCCATAGCCC 60.474 60.000 0.00 0.00 0.00 5.19
401 402 1.557371 GATCTAAGAGCCCCCATAGCC 59.443 57.143 0.00 0.00 0.00 3.93
402 403 1.557371 GGATCTAAGAGCCCCCATAGC 59.443 57.143 0.00 0.00 31.04 2.97
403 404 2.907892 TGGATCTAAGAGCCCCCATAG 58.092 52.381 0.00 0.00 37.30 2.23
404 405 3.181396 TGATGGATCTAAGAGCCCCCATA 60.181 47.826 0.00 0.00 37.30 2.74
405 406 2.273619 GATGGATCTAAGAGCCCCCAT 58.726 52.381 0.00 0.00 37.30 4.00
406 407 1.061424 TGATGGATCTAAGAGCCCCCA 60.061 52.381 0.00 0.00 37.30 4.96
407 408 1.734655 TGATGGATCTAAGAGCCCCC 58.265 55.000 0.00 0.00 37.30 5.40
408 409 2.224646 GGTTGATGGATCTAAGAGCCCC 60.225 54.545 0.00 0.00 37.30 5.80
409 410 2.224646 GGGTTGATGGATCTAAGAGCCC 60.225 54.545 0.00 0.00 37.30 5.19
410 411 2.439507 TGGGTTGATGGATCTAAGAGCC 59.560 50.000 0.00 0.00 38.78 4.70
411 412 3.495806 CCTGGGTTGATGGATCTAAGAGC 60.496 52.174 0.00 0.00 0.00 4.09
412 413 3.713764 ACCTGGGTTGATGGATCTAAGAG 59.286 47.826 0.00 0.00 0.00 2.85
413 414 3.736094 ACCTGGGTTGATGGATCTAAGA 58.264 45.455 0.00 0.00 0.00 2.10
414 415 4.901849 TCTACCTGGGTTGATGGATCTAAG 59.098 45.833 0.00 0.00 0.00 2.18
415 416 4.654262 GTCTACCTGGGTTGATGGATCTAA 59.346 45.833 7.13 0.00 33.11 2.10
416 417 4.223953 GTCTACCTGGGTTGATGGATCTA 58.776 47.826 7.13 0.00 33.11 1.98
417 418 3.041946 GTCTACCTGGGTTGATGGATCT 58.958 50.000 7.13 0.00 33.11 2.75
418 419 2.104963 GGTCTACCTGGGTTGATGGATC 59.895 54.545 7.13 0.00 33.11 3.36
419 420 2.127708 GGTCTACCTGGGTTGATGGAT 58.872 52.381 7.13 0.00 33.11 3.41
420 421 1.580059 GGTCTACCTGGGTTGATGGA 58.420 55.000 7.13 0.00 33.11 3.41
421 422 0.546598 GGGTCTACCTGGGTTGATGG 59.453 60.000 7.13 0.00 33.11 3.51
422 423 1.285280 TGGGTCTACCTGGGTTGATG 58.715 55.000 7.13 0.00 41.11 3.07
423 424 2.041216 GTTTGGGTCTACCTGGGTTGAT 59.959 50.000 7.13 0.00 41.11 2.57
424 425 1.422402 GTTTGGGTCTACCTGGGTTGA 59.578 52.381 0.00 0.00 41.11 3.18
425 426 1.423921 AGTTTGGGTCTACCTGGGTTG 59.576 52.381 0.00 0.00 41.11 3.77
426 427 1.703513 GAGTTTGGGTCTACCTGGGTT 59.296 52.381 0.00 0.00 41.11 4.11
427 428 1.132495 AGAGTTTGGGTCTACCTGGGT 60.132 52.381 0.00 0.00 41.11 4.51
428 429 1.555533 GAGAGTTTGGGTCTACCTGGG 59.444 57.143 0.00 0.00 41.11 4.45
429 430 2.234908 CTGAGAGTTTGGGTCTACCTGG 59.765 54.545 0.00 0.00 41.11 4.45
430 431 3.165875 TCTGAGAGTTTGGGTCTACCTG 58.834 50.000 0.00 0.00 41.11 4.00
431 432 3.544698 TCTGAGAGTTTGGGTCTACCT 57.455 47.619 0.00 0.00 41.11 3.08
432 433 3.617775 GCTTCTGAGAGTTTGGGTCTACC 60.618 52.174 0.00 0.00 40.81 3.18
433 434 3.006967 TGCTTCTGAGAGTTTGGGTCTAC 59.993 47.826 0.00 0.00 0.00 2.59
434 435 3.239449 TGCTTCTGAGAGTTTGGGTCTA 58.761 45.455 0.00 0.00 0.00 2.59
435 436 2.050144 TGCTTCTGAGAGTTTGGGTCT 58.950 47.619 0.00 0.00 0.00 3.85
436 437 2.550830 TGCTTCTGAGAGTTTGGGTC 57.449 50.000 0.00 0.00 0.00 4.46
437 438 3.515602 ATTGCTTCTGAGAGTTTGGGT 57.484 42.857 0.00 0.00 0.00 4.51
438 439 4.583871 ACTATTGCTTCTGAGAGTTTGGG 58.416 43.478 0.00 0.00 0.00 4.12
439 440 5.123027 GGAACTATTGCTTCTGAGAGTTTGG 59.877 44.000 0.00 0.00 0.00 3.28
440 441 5.123027 GGGAACTATTGCTTCTGAGAGTTTG 59.877 44.000 0.00 0.00 0.00 2.93
441 442 5.249420 GGGAACTATTGCTTCTGAGAGTTT 58.751 41.667 0.00 0.00 0.00 2.66
442 443 4.323868 GGGGAACTATTGCTTCTGAGAGTT 60.324 45.833 0.00 0.00 0.00 3.01
443 444 3.198853 GGGGAACTATTGCTTCTGAGAGT 59.801 47.826 0.00 0.00 0.00 3.24
444 445 3.432890 GGGGGAACTATTGCTTCTGAGAG 60.433 52.174 0.00 0.00 0.00 3.20
445 446 2.505819 GGGGGAACTATTGCTTCTGAGA 59.494 50.000 0.00 0.00 0.00 3.27
446 447 2.924421 GGGGGAACTATTGCTTCTGAG 58.076 52.381 0.00 0.00 0.00 3.35
463 464 1.780309 TGCTAGGGATTACAATGGGGG 59.220 52.381 0.00 0.00 0.00 5.40
464 465 3.074390 TCATGCTAGGGATTACAATGGGG 59.926 47.826 0.00 0.00 0.00 4.96
465 466 4.330250 CTCATGCTAGGGATTACAATGGG 58.670 47.826 0.00 0.00 0.00 4.00
466 467 4.202503 ACCTCATGCTAGGGATTACAATGG 60.203 45.833 5.50 0.00 41.32 3.16
467 468 4.978099 ACCTCATGCTAGGGATTACAATG 58.022 43.478 5.50 0.00 41.32 2.82
468 469 6.959606 ATACCTCATGCTAGGGATTACAAT 57.040 37.500 5.50 0.00 36.76 2.71
469 470 7.125811 GGATATACCTCATGCTAGGGATTACAA 59.874 40.741 3.55 0.00 36.76 2.41
470 471 6.611642 GGATATACCTCATGCTAGGGATTACA 59.388 42.308 3.55 0.00 36.76 2.41
471 472 6.611642 TGGATATACCTCATGCTAGGGATTAC 59.388 42.308 3.55 0.00 36.76 1.89
472 473 6.611642 GTGGATATACCTCATGCTAGGGATTA 59.388 42.308 3.55 0.00 36.76 1.75
473 474 5.426833 GTGGATATACCTCATGCTAGGGATT 59.573 44.000 3.55 0.00 36.76 3.01
474 475 4.965532 GTGGATATACCTCATGCTAGGGAT 59.034 45.833 3.72 3.72 43.14 3.85
475 476 4.353777 GTGGATATACCTCATGCTAGGGA 58.646 47.826 5.50 0.00 41.32 4.20
476 477 3.452627 GGTGGATATACCTCATGCTAGGG 59.547 52.174 5.50 0.00 41.32 3.53
477 478 4.096681 TGGTGGATATACCTCATGCTAGG 58.903 47.826 0.00 0.00 41.43 3.02
478 479 5.423290 TCATGGTGGATATACCTCATGCTAG 59.577 44.000 10.93 0.00 43.41 3.42
479 480 5.341169 TCATGGTGGATATACCTCATGCTA 58.659 41.667 10.93 0.00 43.41 3.49
480 481 4.170449 TCATGGTGGATATACCTCATGCT 58.830 43.478 10.93 0.00 43.41 3.79
487 488 7.500892 TGTGTTTGTATTCATGGTGGATATACC 59.499 37.037 0.00 0.00 41.24 2.73
492 493 6.267471 ACTTTGTGTTTGTATTCATGGTGGAT 59.733 34.615 0.00 0.00 0.00 3.41
519 520 0.313043 ATGAGTAATACCCCGCGTCG 59.687 55.000 4.92 0.00 0.00 5.12
534 535 0.465705 TTTGGGCCTCTAGCGATGAG 59.534 55.000 4.53 0.00 45.17 2.90
537 538 0.983378 AGGTTTGGGCCTCTAGCGAT 60.983 55.000 4.53 0.00 45.17 4.58
540 541 0.328258 TCAAGGTTTGGGCCTCTAGC 59.672 55.000 4.53 0.00 38.03 3.42
542 543 4.938575 TTTATCAAGGTTTGGGCCTCTA 57.061 40.909 4.53 0.00 38.03 2.43
543 544 3.825908 TTTATCAAGGTTTGGGCCTCT 57.174 42.857 4.53 0.00 38.03 3.69
551 552 7.598493 GCATGTACACACAATTTATCAAGGTTT 59.402 33.333 0.00 0.00 38.42 3.27
559 560 7.391554 AGAACAGAGCATGTACACACAATTTAT 59.608 33.333 0.00 0.00 43.00 1.40
564 566 3.809279 CAGAACAGAGCATGTACACACAA 59.191 43.478 0.00 0.00 43.00 3.33
566 568 2.738846 CCAGAACAGAGCATGTACACAC 59.261 50.000 0.00 0.00 43.00 3.82
575 577 1.272490 CGGAAGTACCAGAACAGAGCA 59.728 52.381 0.00 0.00 38.90 4.26
580 582 1.342174 GTGACCGGAAGTACCAGAACA 59.658 52.381 9.46 0.00 38.90 3.18
581 583 1.342174 TGTGACCGGAAGTACCAGAAC 59.658 52.381 9.46 0.00 38.90 3.01
597 599 1.203038 TCGGTAGGGTGGTAAGTGTGA 60.203 52.381 0.00 0.00 0.00 3.58
638 640 0.393267 TTATGGTTGTAGGTGCCGGC 60.393 55.000 22.73 22.73 0.00 6.13
683 685 6.944557 TGTTGTATGTCGACTTCTGTATTG 57.055 37.500 17.92 0.00 0.00 1.90
685 687 7.064609 CCAATTGTTGTATGTCGACTTCTGTAT 59.935 37.037 17.92 2.98 0.00 2.29
737 739 6.811253 TGTAGTCAAATAATGTCGCCTTTT 57.189 33.333 0.00 0.00 0.00 2.27
885 887 7.765307 ACTGTCCATGTAAAGCAGATTAATTG 58.235 34.615 0.00 0.00 0.00 2.32
924 926 6.683974 AGAGCAATGTATTTGTACCATGTC 57.316 37.500 0.00 0.00 37.65 3.06
981 983 3.758554 CCATAACAGAAGGGAAAGTGTGG 59.241 47.826 0.00 0.00 0.00 4.17
1187 1191 9.733556 ATATCCACTACAAGATAAACACACAAA 57.266 29.630 0.00 0.00 0.00 2.83
1400 1404 3.182572 GCTTGGTACGATCATCGATTGAC 59.817 47.826 15.60 5.88 43.74 3.18
1408 1412 0.530650 CTGGCGCTTGGTACGATCAT 60.531 55.000 7.64 0.00 0.00 2.45
1465 1469 4.724399 TGACAAAGGAGGAAGTATGCAAA 58.276 39.130 0.00 0.00 0.00 3.68
1480 1484 9.695526 TTTGATTGTAGGAATTTGATGACAAAG 57.304 29.630 0.00 0.00 46.84 2.77
1523 1528 6.409005 CCATCTCATAAGTCAATTCTGGGACT 60.409 42.308 0.00 0.00 45.85 3.85
1527 1532 5.933617 TCCCATCTCATAAGTCAATTCTGG 58.066 41.667 0.00 0.00 0.00 3.86
2141 2190 7.040478 GCCTTGCATAACCATGTTAGATATGAA 60.040 37.037 0.00 0.00 34.40 2.57
2142 2191 6.430925 GCCTTGCATAACCATGTTAGATATGA 59.569 38.462 0.00 0.00 34.40 2.15
2223 2272 2.026262 AGTCTTGGTGGTGACAAAGTGT 60.026 45.455 0.00 0.00 46.06 3.55
2247 2296 1.008538 GTGGCTTGAAACCTGCACG 60.009 57.895 0.00 0.00 0.00 5.34
2302 2351 1.234821 CTGTAGCGTTGCCTTTCCAA 58.765 50.000 0.00 0.00 0.00 3.53
2431 2480 4.081586 TGGCTTAATGCTGATTTTCATGCA 60.082 37.500 0.00 0.00 42.39 3.96
2473 2523 4.839668 ATGGTACTAGAACTGAGCGATC 57.160 45.455 0.00 0.00 0.00 3.69
2657 2710 9.517609 GTAGTTAACACAGTGGACATCTATTAG 57.482 37.037 8.61 0.00 0.00 1.73
2661 2714 7.534723 AAGTAGTTAACACAGTGGACATCTA 57.465 36.000 8.61 0.00 0.00 1.98
2693 2746 9.206690 TGTCCCTAAAATTTATATTGCCAATGA 57.793 29.630 0.00 0.00 0.00 2.57
2847 2905 6.586344 TGAAGAACCAAACCAAAATGCATAA 58.414 32.000 0.00 0.00 0.00 1.90
2917 2975 3.219198 GGGGGCGAATCCATGTGC 61.219 66.667 0.00 0.00 36.21 4.57
2943 3002 1.681780 CCTTCCCTTGTGTGTGTGTGT 60.682 52.381 0.00 0.00 0.00 3.72
2967 3026 1.973812 GCCCAAGAGGAGTTGGTGC 60.974 63.158 2.12 2.00 44.98 5.01
2968 3027 1.303643 GGCCCAAGAGGAGTTGGTG 60.304 63.158 0.00 0.00 44.98 4.17
2969 3028 2.539081 GGGCCCAAGAGGAGTTGGT 61.539 63.158 19.95 0.00 44.98 3.67
2971 3030 0.610232 CAAGGGCCCAAGAGGAGTTG 60.610 60.000 27.56 13.37 38.24 3.16
2973 3032 1.464198 ACAAGGGCCCAAGAGGAGT 60.464 57.895 27.56 8.24 38.24 3.85
2974 3033 1.001641 CACAAGGGCCCAAGAGGAG 60.002 63.158 27.56 7.55 38.24 3.69
2975 3034 2.538141 CCACAAGGGCCCAAGAGGA 61.538 63.158 27.56 0.00 38.24 3.71
2976 3035 2.036256 CCACAAGGGCCCAAGAGG 59.964 66.667 27.56 19.59 39.47 3.69
3092 3152 3.252215 TGGAAAATGTTGTCGGTGATGTC 59.748 43.478 0.00 0.00 0.00 3.06
3093 3153 3.004315 GTGGAAAATGTTGTCGGTGATGT 59.996 43.478 0.00 0.00 0.00 3.06
3129 3189 5.791664 TGGGGTAATACCGGGTATTATTGAT 59.208 40.000 31.73 15.02 41.18 2.57
3132 3192 7.827603 TTATGGGGTAATACCGGGTATTATT 57.172 36.000 31.73 17.69 41.18 1.40
3133 3193 7.462006 AGTTTATGGGGTAATACCGGGTATTAT 59.538 37.037 31.73 22.55 41.18 1.28
3248 3308 7.782049 TGAGTGTTAGTAGGACAAGATTATGG 58.218 38.462 0.00 0.00 0.00 2.74
3249 3309 9.653287 TTTGAGTGTTAGTAGGACAAGATTATG 57.347 33.333 0.00 0.00 0.00 1.90
3253 3313 7.963532 TCTTTTGAGTGTTAGTAGGACAAGAT 58.036 34.615 0.00 0.00 0.00 2.40
3257 3317 7.297936 TGATCTTTTGAGTGTTAGTAGGACA 57.702 36.000 0.00 0.00 0.00 4.02
3319 3379 9.650539 CGAAGGAGTTTCATTCATATCTATGAT 57.349 33.333 0.93 0.00 37.04 2.45
3346 3406 6.655003 CCACAATTCCACTATCGGCTATTAAT 59.345 38.462 0.00 0.00 0.00 1.40
3348 3408 5.305902 TCCACAATTCCACTATCGGCTATTA 59.694 40.000 0.00 0.00 0.00 0.98
3352 3412 1.837439 TCCACAATTCCACTATCGGCT 59.163 47.619 0.00 0.00 0.00 5.52
3354 3414 3.808728 ACATCCACAATTCCACTATCGG 58.191 45.455 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.