Multiple sequence alignment - TraesCS1B01G281400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G281400 chr1B 100.000 3138 0 0 1 3138 489627925 489631062 0.000000e+00 5795.0
1 TraesCS1B01G281400 chr1B 83.019 689 69 26 1185 1844 489545442 489546111 5.830000e-162 580.0
2 TraesCS1B01G281400 chr1B 83.242 549 72 11 1211 1743 489787501 489788045 1.310000e-133 486.0
3 TraesCS1B01G281400 chr1B 79.847 655 97 23 1183 1810 489809188 489809834 2.220000e-121 446.0
4 TraesCS1B01G281400 chr1B 81.707 328 41 15 791 1104 489545001 489545323 4.020000e-64 255.0
5 TraesCS1B01G281400 chr1B 82.867 286 43 5 828 1110 489787003 489787285 5.200000e-63 252.0
6 TraesCS1B01G281400 chr1B 81.962 316 30 10 796 1106 489808738 489809031 3.130000e-60 243.0
7 TraesCS1B01G281400 chr1B 82.979 188 17 11 2796 2972 593225632 593225449 4.190000e-34 156.0
8 TraesCS1B01G281400 chr1A 89.938 2097 136 32 106 2149 464910519 464912593 0.000000e+00 2634.0
9 TraesCS1B01G281400 chr1A 87.500 608 56 12 1185 1781 464907737 464908335 0.000000e+00 684.0
10 TraesCS1B01G281400 chr1A 79.270 685 104 25 1183 1840 465105450 465106123 7.990000e-121 444.0
11 TraesCS1B01G281400 chr1A 83.416 404 25 19 2168 2545 464912702 464913089 1.390000e-88 337.0
12 TraesCS1B01G281400 chr1A 92.821 195 14 0 1211 1405 465074587 465074781 1.840000e-72 283.0
13 TraesCS1B01G281400 chr1A 81.269 331 41 17 791 1104 464900961 464901287 6.720000e-62 248.0
14 TraesCS1B01G281400 chr1A 87.560 209 19 4 2606 2813 464915902 464916104 5.230000e-58 235.0
15 TraesCS1B01G281400 chr1A 80.757 317 32 14 796 1106 465105024 465105317 1.470000e-53 220.0
16 TraesCS1B01G281400 chr1A 84.663 163 16 4 2980 3138 464916172 464916329 1.510000e-33 154.0
17 TraesCS1B01G281400 chr1A 98.333 60 1 0 2979 3038 30296170 30296229 4.280000e-19 106.0
18 TraesCS1B01G281400 chr1D 90.126 2056 99 45 632 2607 365794288 365796319 0.000000e+00 2577.0
19 TraesCS1B01G281400 chr1D 84.718 674 68 21 1185 1844 365790855 365791507 2.640000e-180 641.0
20 TraesCS1B01G281400 chr1D 81.672 682 80 23 1438 2112 365851443 365852086 2.770000e-145 525.0
21 TraesCS1B01G281400 chr1D 83.607 549 70 11 1211 1743 365846186 365846730 6.040000e-137 497.0
22 TraesCS1B01G281400 chr1D 79.913 687 96 29 1183 1840 365894589 365895262 1.700000e-127 466.0
23 TraesCS1B01G281400 chr1D 82.864 391 39 14 2606 2984 365796668 365797042 3.020000e-85 326.0
24 TraesCS1B01G281400 chr1D 82.102 352 46 11 767 1105 365850610 365850957 5.120000e-73 285.0
25 TraesCS1B01G281400 chr1D 81.329 316 32 9 796 1106 365894086 365894379 6.770000e-57 231.0
26 TraesCS1B01G281400 chr1D 96.721 61 2 0 2977 3037 324743592 324743652 5.540000e-18 102.0
27 TraesCS1B01G281400 chr1D 82.000 100 13 4 1966 2064 365851892 365851987 2.590000e-11 80.5
28 TraesCS1B01G281400 chr5B 93.458 107 7 0 3 109 230797539 230797645 3.240000e-35 159.0
29 TraesCS1B01G281400 chr5B 93.443 61 2 2 2977 3036 682695917 682695858 4.310000e-14 89.8
30 TraesCS1B01G281400 chr5D 92.661 109 8 0 1 109 269215223 269215331 1.170000e-34 158.0
31 TraesCS1B01G281400 chr5D 79.412 136 19 2 2824 2950 328574168 328574033 1.550000e-13 87.9
32 TraesCS1B01G281400 chr3D 92.661 109 8 0 1 109 457760100 457759992 1.170000e-34 158.0
33 TraesCS1B01G281400 chr3D 94.828 58 2 1 2977 3034 448532643 448532699 4.310000e-14 89.8
34 TraesCS1B01G281400 chr2D 92.661 109 8 0 1 109 287314509 287314401 1.170000e-34 158.0
35 TraesCS1B01G281400 chr2D 91.743 109 9 0 1 109 286703256 286703148 5.420000e-33 152.0
36 TraesCS1B01G281400 chr2D 91.589 107 9 0 3 109 54028682 54028788 7.010000e-32 148.0
37 TraesCS1B01G281400 chr2B 91.743 109 8 1 1 109 47278373 47278266 1.950000e-32 150.0
38 TraesCS1B01G281400 chr2B 91.589 107 9 0 3 109 562777707 562777813 7.010000e-32 148.0
39 TraesCS1B01G281400 chr2B 81.159 138 20 6 2825 2957 763523358 763523222 4.280000e-19 106.0
40 TraesCS1B01G281400 chr3B 83.237 173 18 8 2806 2970 651266650 651266819 7.010000e-32 148.0
41 TraesCS1B01G281400 chr3B 89.474 95 7 3 2944 3037 651266896 651266988 1.980000e-22 117.0
42 TraesCS1B01G281400 chr3B 94.000 50 3 0 2899 2948 476035282 476035331 3.360000e-10 76.8
43 TraesCS1B01G281400 chr3B 77.536 138 11 9 2806 2941 476035112 476035231 7.260000e-07 65.8
44 TraesCS1B01G281400 chr4D 90.826 109 9 1 1 109 309666671 309666564 9.070000e-31 145.0
45 TraesCS1B01G281400 chr4D 83.673 98 10 6 2943 3036 374298947 374298852 1.550000e-13 87.9
46 TraesCS1B01G281400 chr2A 79.630 162 28 5 2817 2976 748773688 748773846 9.200000e-21 111.0
47 TraesCS1B01G281400 chr2A 79.562 137 16 6 2824 2948 709200422 709200558 1.550000e-13 87.9
48 TraesCS1B01G281400 chr3A 95.082 61 3 0 2977 3037 631809564 631809624 2.580000e-16 97.1
49 TraesCS1B01G281400 chr7D 93.548 62 4 0 2977 3038 28339219 28339158 3.330000e-15 93.5
50 TraesCS1B01G281400 chr6A 85.455 55 8 0 2817 2871 572128427 572128373 1.220000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G281400 chr1B 489627925 489631062 3137 False 5795.000000 5795 100.000000 1 3138 1 chr1B.!!$F1 3137
1 TraesCS1B01G281400 chr1B 489545001 489546111 1110 False 417.500000 580 82.363000 791 1844 2 chr1B.!!$F2 1053
2 TraesCS1B01G281400 chr1B 489787003 489788045 1042 False 369.000000 486 83.054500 828 1743 2 chr1B.!!$F3 915
3 TraesCS1B01G281400 chr1B 489808738 489809834 1096 False 344.500000 446 80.904500 796 1810 2 chr1B.!!$F4 1014
4 TraesCS1B01G281400 chr1A 464907737 464916329 8592 False 808.800000 2634 86.615400 106 3138 5 chr1A.!!$F4 3032
5 TraesCS1B01G281400 chr1A 465105024 465106123 1099 False 332.000000 444 80.013500 796 1840 2 chr1A.!!$F5 1044
6 TraesCS1B01G281400 chr1D 365790855 365797042 6187 False 1181.333333 2577 85.902667 632 2984 3 chr1D.!!$F2 2352
7 TraesCS1B01G281400 chr1D 365894086 365895262 1176 False 348.500000 466 80.621000 796 1840 2 chr1D.!!$F4 1044
8 TraesCS1B01G281400 chr1D 365846186 365852086 5900 False 346.875000 525 82.345250 767 2112 4 chr1D.!!$F3 1345

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
722 723 0.030235 GGTGCCGGTTCAAAACTGTC 59.97 55.0 1.9 0.0 35.99 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2489 8469 0.621082 TGGCATGAATCGGGTGGTTA 59.379 50.0 0.0 0.0 0.0 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.680442 TTAGAAACCGAATGTGATTGAATCA 57.320 32.000 3.29 3.29 36.84 2.57
27 28 6.764308 AGAAACCGAATGTGATTGAATCAT 57.236 33.333 11.46 0.00 42.04 2.45
28 29 6.789262 AGAAACCGAATGTGATTGAATCATC 58.211 36.000 11.46 4.30 42.04 2.92
30 31 3.002656 ACCGAATGTGATTGAATCATCGC 59.997 43.478 18.91 5.90 42.04 4.58
32 33 3.060339 CGAATGTGATTGAATCATCGCGA 60.060 43.478 13.09 13.09 42.04 5.87
34 35 2.204237 TGTGATTGAATCATCGCGAGG 58.796 47.619 15.81 15.81 42.04 4.63
35 36 2.205074 GTGATTGAATCATCGCGAGGT 58.795 47.619 21.22 1.34 42.04 3.85
36 37 2.609459 GTGATTGAATCATCGCGAGGTT 59.391 45.455 21.22 13.85 42.04 3.50
37 38 3.802139 GTGATTGAATCATCGCGAGGTTA 59.198 43.478 21.22 2.08 42.04 2.85
38 39 4.270084 GTGATTGAATCATCGCGAGGTTAA 59.730 41.667 21.22 11.61 42.04 2.01
39 40 4.270084 TGATTGAATCATCGCGAGGTTAAC 59.730 41.667 21.22 10.63 33.59 2.01
40 41 3.239587 TGAATCATCGCGAGGTTAACA 57.760 42.857 21.22 12.93 0.00 2.41
42 43 4.188462 TGAATCATCGCGAGGTTAACAAT 58.812 39.130 21.22 2.36 0.00 2.71
43 44 5.353111 TGAATCATCGCGAGGTTAACAATA 58.647 37.500 21.22 0.00 0.00 1.90
44 45 5.462068 TGAATCATCGCGAGGTTAACAATAG 59.538 40.000 21.22 0.00 0.00 1.73
45 46 4.642445 TCATCGCGAGGTTAACAATAGA 57.358 40.909 21.22 0.00 0.00 1.98
46 47 5.001237 TCATCGCGAGGTTAACAATAGAA 57.999 39.130 21.22 0.00 0.00 2.10
48 49 6.046593 TCATCGCGAGGTTAACAATAGAAAT 58.953 36.000 21.22 0.00 0.00 2.17
49 50 6.537301 TCATCGCGAGGTTAACAATAGAAATT 59.463 34.615 21.22 0.00 0.00 1.82
50 51 6.102006 TCGCGAGGTTAACAATAGAAATTG 57.898 37.500 3.71 0.00 46.66 2.32
62 63 1.372872 GAAATTGTGGTGGCGTGGC 60.373 57.895 0.00 0.00 0.00 5.01
63 64 2.081425 GAAATTGTGGTGGCGTGGCA 62.081 55.000 0.00 0.00 0.00 4.92
64 65 1.470996 AAATTGTGGTGGCGTGGCAT 61.471 50.000 0.00 0.00 0.00 4.40
65 66 1.876497 AATTGTGGTGGCGTGGCATC 61.876 55.000 0.00 0.00 0.00 3.91
66 67 3.781605 TTGTGGTGGCGTGGCATCA 62.782 57.895 5.13 5.13 0.00 3.07
67 68 2.751436 GTGGTGGCGTGGCATCAT 60.751 61.111 12.75 0.00 0.00 2.45
68 69 2.035469 TGGTGGCGTGGCATCATT 59.965 55.556 5.13 0.00 0.00 2.57
69 70 1.029408 GTGGTGGCGTGGCATCATTA 61.029 55.000 12.75 0.00 0.00 1.90
71 72 1.356624 GTGGCGTGGCATCATTAGC 59.643 57.895 0.00 0.00 0.00 3.09
72 73 1.077858 TGGCGTGGCATCATTAGCA 60.078 52.632 0.00 0.00 0.00 3.49
75 76 0.039798 GCGTGGCATCATTAGCATGG 60.040 55.000 0.00 0.00 0.00 3.66
77 78 1.815021 CGTGGCATCATTAGCATGGGA 60.815 52.381 0.00 0.00 0.00 4.37
78 79 2.522185 GTGGCATCATTAGCATGGGAT 58.478 47.619 0.00 0.00 0.00 3.85
79 80 2.895404 GTGGCATCATTAGCATGGGATT 59.105 45.455 0.00 0.00 0.00 3.01
80 81 4.081406 GTGGCATCATTAGCATGGGATTA 58.919 43.478 0.00 0.00 0.00 1.75
82 83 4.202599 TGGCATCATTAGCATGGGATTACT 60.203 41.667 0.00 0.00 0.00 2.24
83 84 4.157289 GGCATCATTAGCATGGGATTACTG 59.843 45.833 0.00 0.00 0.00 2.74
84 85 4.763793 GCATCATTAGCATGGGATTACTGT 59.236 41.667 0.00 0.00 0.00 3.55
85 86 5.939883 GCATCATTAGCATGGGATTACTGTA 59.060 40.000 0.00 0.00 0.00 2.74
86 87 6.093219 GCATCATTAGCATGGGATTACTGTAG 59.907 42.308 0.00 0.00 0.00 2.74
87 88 6.747414 TCATTAGCATGGGATTACTGTAGT 57.253 37.500 0.00 0.00 0.00 2.73
88 89 7.849322 TCATTAGCATGGGATTACTGTAGTA 57.151 36.000 0.00 0.00 0.00 1.82
90 91 9.541884 TCATTAGCATGGGATTACTGTAGTATA 57.458 33.333 0.00 0.00 0.00 1.47
99 100 8.974238 TGGGATTACTGTAGTATAATTATCCGG 58.026 37.037 0.00 0.00 35.37 5.14
100 101 8.419442 GGGATTACTGTAGTATAATTATCCGGG 58.581 40.741 0.00 0.00 35.37 5.73
101 102 7.924947 GGATTACTGTAGTATAATTATCCGGGC 59.075 40.741 0.00 0.00 28.90 6.13
103 104 4.768968 ACTGTAGTATAATTATCCGGGCGT 59.231 41.667 0.00 0.00 0.00 5.68
105 106 6.434028 ACTGTAGTATAATTATCCGGGCGTTA 59.566 38.462 0.00 0.00 0.00 3.18
106 107 6.620678 TGTAGTATAATTATCCGGGCGTTAC 58.379 40.000 0.00 0.00 0.00 2.50
107 108 5.726980 AGTATAATTATCCGGGCGTTACA 57.273 39.130 0.00 0.00 0.00 2.41
108 109 6.100404 AGTATAATTATCCGGGCGTTACAA 57.900 37.500 0.00 0.00 0.00 2.41
109 110 5.928264 AGTATAATTATCCGGGCGTTACAAC 59.072 40.000 0.00 0.00 0.00 3.32
110 111 1.957668 ATTATCCGGGCGTTACAACC 58.042 50.000 0.00 0.00 0.00 3.77
111 112 0.459934 TTATCCGGGCGTTACAACCG 60.460 55.000 0.00 7.59 46.79 4.44
116 117 3.866356 GGCGTTACAACCGACCTC 58.134 61.111 0.00 0.00 0.00 3.85
117 118 1.005867 GGCGTTACAACCGACCTCA 60.006 57.895 0.00 0.00 0.00 3.86
118 119 0.390735 GGCGTTACAACCGACCTCAT 60.391 55.000 0.00 0.00 0.00 2.90
120 121 1.127951 GCGTTACAACCGACCTCATTG 59.872 52.381 0.00 0.00 0.00 2.82
121 122 2.409975 CGTTACAACCGACCTCATTGT 58.590 47.619 0.00 0.00 39.75 2.71
122 123 2.410730 CGTTACAACCGACCTCATTGTC 59.589 50.000 0.00 0.00 37.68 3.18
128 129 4.693532 GACCTCATTGTCGGCACA 57.306 55.556 0.00 0.00 0.00 4.57
130 131 1.298859 GACCTCATTGTCGGCACACC 61.299 60.000 0.00 0.00 29.76 4.16
131 132 1.003355 CCTCATTGTCGGCACACCT 60.003 57.895 0.00 0.00 29.76 4.00
132 133 1.300971 CCTCATTGTCGGCACACCTG 61.301 60.000 0.00 0.00 29.76 4.00
133 134 0.320683 CTCATTGTCGGCACACCTGA 60.321 55.000 0.00 0.00 29.76 3.86
134 135 0.602638 TCATTGTCGGCACACCTGAC 60.603 55.000 0.00 0.00 38.88 3.51
143 144 2.607750 ACACCTGACGGGCCAGAT 60.608 61.111 10.86 0.00 39.10 2.90
144 145 2.187946 CACCTGACGGGCCAGATC 59.812 66.667 10.86 4.19 39.10 2.75
146 147 2.362369 ACCTGACGGGCCAGATCTG 61.362 63.158 16.24 16.24 39.10 2.90
147 148 2.060383 CCTGACGGGCCAGATCTGA 61.060 63.158 24.62 0.85 36.29 3.27
149 150 1.305297 TGACGGGCCAGATCTGACT 60.305 57.895 24.62 0.00 0.00 3.41
151 152 2.022240 GACGGGCCAGATCTGACTCC 62.022 65.000 24.62 19.37 0.00 3.85
152 153 1.760086 CGGGCCAGATCTGACTCCT 60.760 63.158 24.62 0.00 0.00 3.69
155 156 0.752054 GGCCAGATCTGACTCCTCAG 59.248 60.000 24.62 5.66 44.94 3.35
156 157 0.752054 GCCAGATCTGACTCCTCAGG 59.248 60.000 24.62 4.92 43.87 3.86
157 158 1.687682 GCCAGATCTGACTCCTCAGGA 60.688 57.143 24.62 0.00 43.87 3.86
159 160 1.675483 CAGATCTGACTCCTCAGGACG 59.325 57.143 18.34 0.00 43.87 4.79
160 161 1.562008 AGATCTGACTCCTCAGGACGA 59.438 52.381 0.00 0.00 43.87 4.20
162 163 0.673956 TCTGACTCCTCAGGACGACG 60.674 60.000 0.00 0.00 43.87 5.12
163 164 2.259875 CTGACTCCTCAGGACGACGC 62.260 65.000 0.00 0.00 40.46 5.19
164 165 3.053849 GACTCCTCAGGACGACGCC 62.054 68.421 0.00 0.00 0.00 5.68
165 166 3.062466 CTCCTCAGGACGACGCCA 61.062 66.667 10.28 0.00 0.00 5.69
166 167 3.343788 CTCCTCAGGACGACGCCAC 62.344 68.421 10.28 0.00 0.00 5.01
168 169 4.778415 CTCAGGACGACGCCACGG 62.778 72.222 10.28 1.29 37.61 4.94
171 172 3.379445 AGGACGACGCCACGGAAT 61.379 61.111 10.28 0.00 37.61 3.01
172 173 3.186047 GGACGACGCCACGGAATG 61.186 66.667 0.00 0.00 37.61 2.67
173 174 3.849953 GACGACGCCACGGAATGC 61.850 66.667 0.00 0.00 37.61 3.56
174 175 4.373116 ACGACGCCACGGAATGCT 62.373 61.111 0.00 0.00 37.61 3.79
176 177 4.166011 GACGCCACGGAATGCTGC 62.166 66.667 0.00 0.00 0.00 5.25
178 179 4.170062 CGCCACGGAATGCTGCAG 62.170 66.667 10.11 10.11 0.00 4.41
180 181 2.629656 GCCACGGAATGCTGCAGTT 61.630 57.895 16.64 1.79 0.00 3.16
181 182 1.959085 CCACGGAATGCTGCAGTTT 59.041 52.632 16.64 9.66 0.00 2.66
182 183 0.314935 CCACGGAATGCTGCAGTTTT 59.685 50.000 16.64 9.28 0.00 2.43
185 186 0.454957 CGGAATGCTGCAGTTTTCGG 60.455 55.000 16.64 17.10 0.00 4.30
187 188 0.733909 GAATGCTGCAGTTTTCGGCC 60.734 55.000 16.64 0.00 40.15 6.13
188 189 2.476534 AATGCTGCAGTTTTCGGCCG 62.477 55.000 22.12 22.12 40.15 6.13
190 191 4.404654 CTGCAGTTTTCGGCCGCC 62.405 66.667 23.51 8.12 40.15 6.13
214 215 4.803426 CCGAGTGAGGCAGCCGTC 62.803 72.222 5.55 4.85 0.00 4.79
215 216 4.056125 CGAGTGAGGCAGCCGTCA 62.056 66.667 5.55 7.64 33.79 4.35
220 221 1.672030 TGAGGCAGCCGTCACAATG 60.672 57.895 5.55 0.00 31.43 2.82
224 225 1.745115 GCAGCCGTCACAATGCCTA 60.745 57.895 0.00 0.00 32.49 3.93
226 227 0.108186 CAGCCGTCACAATGCCTAGA 60.108 55.000 0.00 0.00 0.00 2.43
228 229 0.108138 GCCGTCACAATGCCTAGAGT 60.108 55.000 0.00 0.00 0.00 3.24
229 230 1.927895 CCGTCACAATGCCTAGAGTC 58.072 55.000 0.00 0.00 0.00 3.36
230 231 1.204704 CCGTCACAATGCCTAGAGTCA 59.795 52.381 0.00 0.00 0.00 3.41
231 232 2.263077 CGTCACAATGCCTAGAGTCAC 58.737 52.381 0.00 0.00 0.00 3.67
232 233 2.622436 GTCACAATGCCTAGAGTCACC 58.378 52.381 0.00 0.00 0.00 4.02
233 234 1.204704 TCACAATGCCTAGAGTCACCG 59.795 52.381 0.00 0.00 0.00 4.94
234 235 1.204704 CACAATGCCTAGAGTCACCGA 59.795 52.381 0.00 0.00 0.00 4.69
235 236 1.899814 ACAATGCCTAGAGTCACCGAA 59.100 47.619 0.00 0.00 0.00 4.30
236 237 2.093973 ACAATGCCTAGAGTCACCGAAG 60.094 50.000 0.00 0.00 0.00 3.79
238 239 2.145397 TGCCTAGAGTCACCGAAGAT 57.855 50.000 0.00 0.00 0.00 2.40
239 240 1.751351 TGCCTAGAGTCACCGAAGATG 59.249 52.381 0.00 0.00 0.00 2.90
243 244 0.820871 AGAGTCACCGAAGATGAGCC 59.179 55.000 0.00 0.00 0.00 4.70
244 245 0.532573 GAGTCACCGAAGATGAGCCA 59.467 55.000 0.00 0.00 0.00 4.75
245 246 0.247736 AGTCACCGAAGATGAGCCAC 59.752 55.000 0.00 0.00 0.00 5.01
247 248 1.450312 CACCGAAGATGAGCCACCC 60.450 63.158 0.00 0.00 0.00 4.61
248 249 1.613630 ACCGAAGATGAGCCACCCT 60.614 57.895 0.00 0.00 0.00 4.34
250 251 0.462759 CCGAAGATGAGCCACCCTTC 60.463 60.000 0.00 0.00 33.58 3.46
251 252 0.250234 CGAAGATGAGCCACCCTTCA 59.750 55.000 0.00 0.00 35.89 3.02
254 255 0.842030 AGATGAGCCACCCTTCACCA 60.842 55.000 0.00 0.00 0.00 4.17
257 258 2.847234 AGCCACCCTTCACCACGA 60.847 61.111 0.00 0.00 0.00 4.35
259 260 2.358737 CCACCCTTCACCACGAGC 60.359 66.667 0.00 0.00 0.00 5.03
260 261 2.358737 CACCCTTCACCACGAGCC 60.359 66.667 0.00 0.00 0.00 4.70
261 262 2.847234 ACCCTTCACCACGAGCCA 60.847 61.111 0.00 0.00 0.00 4.75
262 263 2.429930 CCCTTCACCACGAGCCAA 59.570 61.111 0.00 0.00 0.00 4.52
263 264 1.002134 CCCTTCACCACGAGCCAAT 60.002 57.895 0.00 0.00 0.00 3.16
264 265 1.308069 CCCTTCACCACGAGCCAATG 61.308 60.000 0.00 0.00 0.00 2.82
266 267 1.926511 CTTCACCACGAGCCAATGCC 61.927 60.000 0.00 0.00 38.69 4.40
267 268 3.803082 CACCACGAGCCAATGCCG 61.803 66.667 0.00 0.00 38.69 5.69
277 278 4.147322 CAATGCCGCCGACGTCAC 62.147 66.667 17.16 5.91 37.70 3.67
286 287 3.755628 CGACGTCACCACCCGGAT 61.756 66.667 17.16 0.00 35.59 4.18
287 288 2.660802 GACGTCACCACCCGGATT 59.339 61.111 11.55 0.00 35.59 3.01
289 290 2.125269 CGTCACCACCCGGATTCC 60.125 66.667 0.73 0.00 35.59 3.01
290 291 2.271173 GTCACCACCCGGATTCCC 59.729 66.667 0.73 0.00 35.59 3.97
291 292 2.204013 TCACCACCCGGATTCCCA 60.204 61.111 0.73 0.00 35.59 4.37
294 295 2.045340 CCACCCGGATTCCCACAC 60.045 66.667 0.73 0.00 0.00 3.82
296 297 2.605295 ACCCGGATTCCCACACGA 60.605 61.111 0.73 0.00 0.00 4.35
297 298 2.186903 CCCGGATTCCCACACGAG 59.813 66.667 0.73 0.00 0.00 4.18
298 299 2.355986 CCCGGATTCCCACACGAGA 61.356 63.158 0.73 0.00 0.00 4.04
299 300 1.594833 CCGGATTCCCACACGAGAA 59.405 57.895 0.00 0.00 0.00 2.87
301 302 0.739813 CGGATTCCCACACGAGAACC 60.740 60.000 0.00 0.00 0.00 3.62
303 304 1.359459 GATTCCCACACGAGAACCGC 61.359 60.000 0.00 0.00 43.32 5.68
304 305 2.798148 ATTCCCACACGAGAACCGCC 62.798 60.000 0.00 0.00 43.32 6.13
305 306 4.308458 CCCACACGAGAACCGCCA 62.308 66.667 0.00 0.00 43.32 5.69
308 309 2.029073 ACACGAGAACCGCCACAG 59.971 61.111 0.00 0.00 43.32 3.66
309 310 3.414700 CACGAGAACCGCCACAGC 61.415 66.667 0.00 0.00 43.32 4.40
310 311 4.681978 ACGAGAACCGCCACAGCC 62.682 66.667 0.00 0.00 43.32 4.85
311 312 4.680237 CGAGAACCGCCACAGCCA 62.680 66.667 0.00 0.00 34.57 4.75
312 313 3.050275 GAGAACCGCCACAGCCAC 61.050 66.667 0.00 0.00 34.57 5.01
319 320 4.082523 GCCACAGCCACGCCTAGA 62.083 66.667 0.00 0.00 0.00 2.43
320 321 2.662596 CCACAGCCACGCCTAGAA 59.337 61.111 0.00 0.00 0.00 2.10
322 323 1.741770 CACAGCCACGCCTAGAACC 60.742 63.158 0.00 0.00 0.00 3.62
323 324 2.214216 ACAGCCACGCCTAGAACCA 61.214 57.895 0.00 0.00 0.00 3.67
324 325 1.221840 CAGCCACGCCTAGAACCAT 59.778 57.895 0.00 0.00 0.00 3.55
327 328 1.819632 CCACGCCTAGAACCATGGC 60.820 63.158 13.04 0.00 42.94 4.40
330 331 2.908015 GCCTAGAACCATGGCGGA 59.092 61.111 13.04 0.00 37.11 5.54
331 332 1.227674 GCCTAGAACCATGGCGGAG 60.228 63.158 13.04 4.05 37.11 4.63
332 333 1.447643 CCTAGAACCATGGCGGAGG 59.552 63.158 13.04 9.89 38.63 4.30
333 334 1.048724 CCTAGAACCATGGCGGAGGA 61.049 60.000 13.04 0.00 38.63 3.71
334 335 0.830648 CTAGAACCATGGCGGAGGAA 59.169 55.000 13.04 0.00 38.63 3.36
337 338 1.728490 GAACCATGGCGGAGGAATGC 61.728 60.000 13.04 0.00 38.63 3.56
344 345 4.891727 CGGAGGAATGCCCCGTCG 62.892 72.222 10.68 0.00 40.77 5.12
363 364 3.866582 CGCCATCCTCCCCCACTC 61.867 72.222 0.00 0.00 0.00 3.51
364 365 3.866582 GCCATCCTCCCCCACTCG 61.867 72.222 0.00 0.00 0.00 4.18
365 366 3.164269 CCATCCTCCCCCACTCGG 61.164 72.222 0.00 0.00 0.00 4.63
385 386 2.046700 TTTGCCCGACGGTGATCC 60.047 61.111 13.94 0.00 0.00 3.36
396 397 2.509336 GTGATCCGACGGTGGCAG 60.509 66.667 14.79 0.00 0.00 4.85
398 399 4.530857 GATCCGACGGTGGCAGGG 62.531 72.222 14.79 0.00 0.00 4.45
423 424 4.603946 GCGGCGGCCTAACCCTAG 62.604 72.222 18.34 0.00 33.26 3.02
424 425 2.836360 CGGCGGCCTAACCCTAGA 60.836 66.667 18.34 0.00 33.26 2.43
425 426 2.207924 CGGCGGCCTAACCCTAGAT 61.208 63.158 18.34 0.00 33.26 1.98
426 427 1.371558 GGCGGCCTAACCCTAGATG 59.628 63.158 12.87 0.00 33.26 2.90
441 442 5.512942 CCTAGATGGGTATGAGAGAGAGA 57.487 47.826 0.00 0.00 0.00 3.10
442 443 6.078456 CCTAGATGGGTATGAGAGAGAGAT 57.922 45.833 0.00 0.00 0.00 2.75
443 444 5.887598 CCTAGATGGGTATGAGAGAGAGATG 59.112 48.000 0.00 0.00 0.00 2.90
444 445 4.676109 AGATGGGTATGAGAGAGAGATGG 58.324 47.826 0.00 0.00 0.00 3.51
446 447 2.520120 TGGGTATGAGAGAGAGATGGGT 59.480 50.000 0.00 0.00 0.00 4.51
447 448 3.051803 TGGGTATGAGAGAGAGATGGGTT 60.052 47.826 0.00 0.00 0.00 4.11
448 449 3.970640 GGGTATGAGAGAGAGATGGGTTT 59.029 47.826 0.00 0.00 0.00 3.27
450 451 4.039852 GGTATGAGAGAGAGATGGGTTTCC 59.960 50.000 0.00 0.00 0.00 3.13
451 452 2.472029 TGAGAGAGAGATGGGTTTCCC 58.528 52.381 0.00 0.00 45.71 3.97
452 453 2.045047 TGAGAGAGAGATGGGTTTCCCT 59.955 50.000 6.38 0.00 45.70 4.20
454 455 1.410882 GAGAGAGATGGGTTTCCCTCG 59.589 57.143 6.38 0.00 45.70 4.63
456 457 2.024273 AGAGAGATGGGTTTCCCTCGTA 60.024 50.000 6.38 0.00 45.70 3.43
457 458 2.101082 GAGAGATGGGTTTCCCTCGTAC 59.899 54.545 6.38 0.00 45.70 3.67
458 459 1.138464 GAGATGGGTTTCCCTCGTACC 59.862 57.143 6.38 0.00 45.70 3.34
460 461 4.142045 GGGTTTCCCTCGTACCCT 57.858 61.111 0.00 0.00 46.55 4.34
461 462 1.600638 GGGTTTCCCTCGTACCCTG 59.399 63.158 0.00 0.00 46.55 4.45
462 463 1.196766 GGGTTTCCCTCGTACCCTGT 61.197 60.000 0.00 0.00 46.55 4.00
463 464 0.248565 GGTTTCCCTCGTACCCTGTC 59.751 60.000 0.00 0.00 0.00 3.51
465 466 0.178926 TTTCCCTCGTACCCTGTCCA 60.179 55.000 0.00 0.00 0.00 4.02
467 468 0.686441 TCCCTCGTACCCTGTCCATG 60.686 60.000 0.00 0.00 0.00 3.66
468 469 1.686325 CCCTCGTACCCTGTCCATGG 61.686 65.000 4.97 4.97 0.00 3.66
469 470 1.144057 CTCGTACCCTGTCCATGGC 59.856 63.158 6.96 2.72 0.00 4.40
470 471 1.305802 TCGTACCCTGTCCATGGCT 60.306 57.895 6.96 0.00 0.00 4.75
471 472 0.907704 TCGTACCCTGTCCATGGCTT 60.908 55.000 6.96 0.00 0.00 4.35
474 475 1.072266 TACCCTGTCCATGGCTTGTT 58.928 50.000 6.96 0.00 0.00 2.83
475 476 0.540365 ACCCTGTCCATGGCTTGTTG 60.540 55.000 6.96 0.00 0.00 3.33
477 478 1.271871 CCCTGTCCATGGCTTGTTGTA 60.272 52.381 6.96 0.00 0.00 2.41
479 480 1.812571 CTGTCCATGGCTTGTTGTACC 59.187 52.381 6.96 0.00 0.00 3.34
483 484 1.271871 CCATGGCTTGTTGTACCCAGA 60.272 52.381 0.00 0.00 0.00 3.86
484 485 1.812571 CATGGCTTGTTGTACCCAGAC 59.187 52.381 0.00 0.00 0.00 3.51
485 486 1.136828 TGGCTTGTTGTACCCAGACT 58.863 50.000 0.00 0.00 0.00 3.24
486 487 1.493022 TGGCTTGTTGTACCCAGACTT 59.507 47.619 0.00 0.00 0.00 3.01
488 489 2.224548 GGCTTGTTGTACCCAGACTTCT 60.225 50.000 0.00 0.00 0.00 2.85
489 490 3.477530 GCTTGTTGTACCCAGACTTCTT 58.522 45.455 0.00 0.00 0.00 2.52
490 491 3.883489 GCTTGTTGTACCCAGACTTCTTT 59.117 43.478 0.00 0.00 0.00 2.52
492 493 5.367945 TTGTTGTACCCAGACTTCTTTCT 57.632 39.130 0.00 0.00 0.00 2.52
493 494 5.367945 TGTTGTACCCAGACTTCTTTCTT 57.632 39.130 0.00 0.00 0.00 2.52
495 496 4.252971 TGTACCCAGACTTCTTTCTTCG 57.747 45.455 0.00 0.00 0.00 3.79
496 497 3.640029 TGTACCCAGACTTCTTTCTTCGT 59.360 43.478 0.00 0.00 0.00 3.85
497 498 3.840124 ACCCAGACTTCTTTCTTCGTT 57.160 42.857 0.00 0.00 0.00 3.85
499 500 4.524053 ACCCAGACTTCTTTCTTCGTTTT 58.476 39.130 0.00 0.00 0.00 2.43
500 501 5.677567 ACCCAGACTTCTTTCTTCGTTTTA 58.322 37.500 0.00 0.00 0.00 1.52
501 502 6.117488 ACCCAGACTTCTTTCTTCGTTTTAA 58.883 36.000 0.00 0.00 0.00 1.52
502 503 6.771267 ACCCAGACTTCTTTCTTCGTTTTAAT 59.229 34.615 0.00 0.00 0.00 1.40
503 504 7.284716 ACCCAGACTTCTTTCTTCGTTTTAATT 59.715 33.333 0.00 0.00 0.00 1.40
504 505 8.135529 CCCAGACTTCTTTCTTCGTTTTAATTT 58.864 33.333 0.00 0.00 0.00 1.82
506 507 9.716507 CAGACTTCTTTCTTCGTTTTAATTTGA 57.283 29.630 0.00 0.00 0.00 2.69
528 529 9.598517 TTTGAACTCATTGATTTTAAAAGCTGT 57.401 25.926 16.47 3.37 0.00 4.40
529 530 9.598517 TTGAACTCATTGATTTTAAAAGCTGTT 57.401 25.926 16.47 12.44 0.00 3.16
530 531 9.033481 TGAACTCATTGATTTTAAAAGCTGTTG 57.967 29.630 16.47 11.10 0.00 3.33
532 533 7.725251 ACTCATTGATTTTAAAAGCTGTTGGA 58.275 30.769 16.47 6.98 0.00 3.53
534 535 9.211485 CTCATTGATTTTAAAAGCTGTTGGATT 57.789 29.630 16.47 0.00 0.00 3.01
535 536 9.558396 TCATTGATTTTAAAAGCTGTTGGATTT 57.442 25.926 16.47 0.00 34.78 2.17
544 545 9.823647 TTAAAAGCTGTTGGATTTTAATGTTCA 57.176 25.926 0.00 0.00 45.08 3.18
545 546 8.729805 AAAAGCTGTTGGATTTTAATGTTCAA 57.270 26.923 0.00 0.00 41.04 2.69
546 547 8.729805 AAAGCTGTTGGATTTTAATGTTCAAA 57.270 26.923 0.00 0.00 28.13 2.69
547 548 8.729805 AAGCTGTTGGATTTTAATGTTCAAAA 57.270 26.923 0.00 0.00 0.00 2.44
548 549 8.141835 AGCTGTTGGATTTTAATGTTCAAAAC 57.858 30.769 0.00 0.00 0.00 2.43
549 550 7.768120 AGCTGTTGGATTTTAATGTTCAAAACA 59.232 29.630 0.00 0.00 46.94 2.83
580 581 9.729023 AAACGAATTATATTGATGCGAAATTGA 57.271 25.926 6.24 0.00 0.00 2.57
592 593 8.492673 TGATGCGAAATTGAAGTTAGAATAGT 57.507 30.769 0.00 0.00 0.00 2.12
594 595 7.667043 TGCGAAATTGAAGTTAGAATAGTGT 57.333 32.000 0.00 0.00 0.00 3.55
596 597 9.378551 TGCGAAATTGAAGTTAGAATAGTGTAT 57.621 29.630 0.00 0.00 0.00 2.29
604 605 9.448438 TGAAGTTAGAATAGTGTATTTGCACAT 57.552 29.630 1.69 0.00 41.52 3.21
616 617 9.448438 AGTGTATTTGCACATACATAGAAGAAA 57.552 29.630 24.38 0.32 40.85 2.52
621 622 8.450578 TTTGCACATACATAGAAGAAATAGGG 57.549 34.615 0.00 0.00 0.00 3.53
622 623 6.533730 TGCACATACATAGAAGAAATAGGGG 58.466 40.000 0.00 0.00 0.00 4.79
623 624 6.101150 TGCACATACATAGAAGAAATAGGGGT 59.899 38.462 0.00 0.00 0.00 4.95
624 625 6.428159 GCACATACATAGAAGAAATAGGGGTG 59.572 42.308 0.00 0.00 0.00 4.61
625 626 7.689313 GCACATACATAGAAGAAATAGGGGTGA 60.689 40.741 0.00 0.00 0.00 4.02
627 628 7.347222 ACATACATAGAAGAAATAGGGGTGACA 59.653 37.037 0.00 0.00 0.00 3.58
628 629 6.636454 ACATAGAAGAAATAGGGGTGACAA 57.364 37.500 0.00 0.00 0.00 3.18
629 630 7.027874 ACATAGAAGAAATAGGGGTGACAAA 57.972 36.000 0.00 0.00 0.00 2.83
630 631 7.466804 ACATAGAAGAAATAGGGGTGACAAAA 58.533 34.615 0.00 0.00 0.00 2.44
631 632 8.116026 ACATAGAAGAAATAGGGGTGACAAAAT 58.884 33.333 0.00 0.00 0.00 1.82
632 633 8.971073 CATAGAAGAAATAGGGGTGACAAAATT 58.029 33.333 0.00 0.00 0.00 1.82
633 634 7.232118 AGAAGAAATAGGGGTGACAAAATTG 57.768 36.000 0.00 0.00 0.00 2.32
634 635 6.782494 AGAAGAAATAGGGGTGACAAAATTGT 59.218 34.615 0.00 0.00 45.65 2.71
636 637 8.485578 AAGAAATAGGGGTGACAAAATTGTAA 57.514 30.769 0.00 0.00 42.43 2.41
637 638 8.485578 AGAAATAGGGGTGACAAAATTGTAAA 57.514 30.769 0.00 0.00 42.43 2.01
638 639 9.100197 AGAAATAGGGGTGACAAAATTGTAAAT 57.900 29.630 0.00 0.00 42.43 1.40
640 641 7.790782 ATAGGGGTGACAAAATTGTAAATGT 57.209 32.000 0.00 0.00 42.43 2.71
641 642 6.493189 AGGGGTGACAAAATTGTAAATGTT 57.507 33.333 0.00 0.00 42.43 2.71
642 643 6.521162 AGGGGTGACAAAATTGTAAATGTTC 58.479 36.000 0.00 0.00 42.43 3.18
643 644 6.098982 AGGGGTGACAAAATTGTAAATGTTCA 59.901 34.615 0.00 0.00 42.43 3.18
644 645 6.763610 GGGGTGACAAAATTGTAAATGTTCAA 59.236 34.615 0.00 0.00 42.43 2.69
647 648 8.878769 GGTGACAAAATTGTAAATGTTCAAGTT 58.121 29.630 0.00 0.00 42.43 2.66
652 653 9.488124 CAAAATTGTAAATGTTCAAGTTTGTGG 57.512 29.630 15.84 0.00 45.66 4.17
655 656 9.612066 AATTGTAAATGTTCAAGTTTGTGGAAT 57.388 25.926 0.00 0.00 0.00 3.01
657 658 8.006298 TGTAAATGTTCAAGTTTGTGGAATCT 57.994 30.769 0.00 0.00 0.00 2.40
658 659 7.920151 TGTAAATGTTCAAGTTTGTGGAATCTG 59.080 33.333 0.00 0.00 0.00 2.90
659 660 6.713762 AATGTTCAAGTTTGTGGAATCTGA 57.286 33.333 0.00 0.00 0.00 3.27
660 661 5.499139 TGTTCAAGTTTGTGGAATCTGAC 57.501 39.130 0.00 0.00 0.00 3.51
661 662 5.192927 TGTTCAAGTTTGTGGAATCTGACT 58.807 37.500 0.00 0.00 0.00 3.41
662 663 5.652014 TGTTCAAGTTTGTGGAATCTGACTT 59.348 36.000 0.00 0.00 0.00 3.01
663 664 6.152661 TGTTCAAGTTTGTGGAATCTGACTTT 59.847 34.615 0.00 0.00 0.00 2.66
664 665 6.135290 TCAAGTTTGTGGAATCTGACTTTG 57.865 37.500 0.00 0.00 0.00 2.77
666 667 3.003689 AGTTTGTGGAATCTGACTTTGCG 59.996 43.478 0.00 0.00 0.00 4.85
671 672 0.179215 GAATCTGACTTTGCGCACCG 60.179 55.000 11.12 6.58 0.00 4.94
683 684 2.339712 GCACCGCATTTGCAACCT 59.660 55.556 0.00 0.00 42.21 3.50
684 685 1.734117 GCACCGCATTTGCAACCTC 60.734 57.895 0.00 0.00 42.21 3.85
685 686 1.080569 CACCGCATTTGCAACCTCC 60.081 57.895 0.00 0.00 42.21 4.30
686 687 1.530419 ACCGCATTTGCAACCTCCA 60.530 52.632 0.00 0.00 42.21 3.86
688 689 0.033228 CCGCATTTGCAACCTCCAAA 59.967 50.000 0.00 0.00 42.21 3.28
694 695 4.142513 GCATTTGCAACCTCCAAAAACAAA 60.143 37.500 0.00 0.00 41.59 2.83
696 697 6.562518 CATTTGCAACCTCCAAAAACAAATT 58.437 32.000 0.00 0.00 34.88 1.82
697 698 7.680588 GCATTTGCAACCTCCAAAAACAAATTA 60.681 33.333 0.00 0.00 41.59 1.40
698 699 7.872113 TTTGCAACCTCCAAAAACAAATTAT 57.128 28.000 0.00 0.00 29.93 1.28
699 700 8.964476 TTTGCAACCTCCAAAAACAAATTATA 57.036 26.923 0.00 0.00 29.93 0.98
700 701 9.566432 TTTGCAACCTCCAAAAACAAATTATAT 57.434 25.926 0.00 0.00 29.93 0.86
701 702 8.545229 TGCAACCTCCAAAAACAAATTATATG 57.455 30.769 0.00 0.00 0.00 1.78
702 703 7.118971 TGCAACCTCCAAAAACAAATTATATGC 59.881 33.333 0.00 0.00 0.00 3.14
703 704 7.673776 GCAACCTCCAAAAACAAATTATATGCG 60.674 37.037 0.00 0.00 0.00 4.73
704 705 6.337356 ACCTCCAAAAACAAATTATATGCGG 58.663 36.000 0.00 0.00 0.00 5.69
706 707 6.255453 CCTCCAAAAACAAATTATATGCGGTG 59.745 38.462 0.00 0.00 0.00 4.94
708 709 5.220567 CCAAAAACAAATTATATGCGGTGCC 60.221 40.000 0.00 0.00 0.00 5.01
710 711 1.606668 ACAAATTATATGCGGTGCCGG 59.393 47.619 12.82 0.00 40.19 6.13
711 712 1.606668 CAAATTATATGCGGTGCCGGT 59.393 47.619 12.82 0.00 40.19 5.28
712 713 1.975660 AATTATATGCGGTGCCGGTT 58.024 45.000 12.82 0.00 40.19 4.44
713 714 1.519408 ATTATATGCGGTGCCGGTTC 58.481 50.000 12.82 0.00 40.19 3.62
714 715 0.178301 TTATATGCGGTGCCGGTTCA 59.822 50.000 12.82 2.44 40.19 3.18
715 716 0.178301 TATATGCGGTGCCGGTTCAA 59.822 50.000 12.82 0.00 40.19 2.69
716 717 0.678366 ATATGCGGTGCCGGTTCAAA 60.678 50.000 12.82 0.00 40.19 2.69
717 718 0.889638 TATGCGGTGCCGGTTCAAAA 60.890 50.000 12.82 0.00 40.19 2.44
719 720 2.841160 GCGGTGCCGGTTCAAAACT 61.841 57.895 12.82 0.00 40.19 2.66
721 722 1.720694 CGGTGCCGGTTCAAAACTGT 61.721 55.000 1.90 0.00 35.99 3.55
722 723 0.030235 GGTGCCGGTTCAAAACTGTC 59.970 55.000 1.90 0.00 35.99 3.51
723 724 1.021968 GTGCCGGTTCAAAACTGTCT 58.978 50.000 1.90 0.00 35.99 3.41
724 725 1.404035 GTGCCGGTTCAAAACTGTCTT 59.596 47.619 1.90 0.00 35.99 3.01
725 726 1.403679 TGCCGGTTCAAAACTGTCTTG 59.596 47.619 1.90 0.00 35.99 3.02
727 728 2.294074 CCGGTTCAAAACTGTCTTGGA 58.706 47.619 0.00 0.00 35.99 3.53
728 729 2.290641 CCGGTTCAAAACTGTCTTGGAG 59.709 50.000 0.00 0.00 35.99 3.86
730 731 2.034685 GGTTCAAAACTGTCTTGGAGGC 59.965 50.000 0.00 0.00 0.00 4.70
735 736 2.435586 CTGTCTTGGAGGCTGCCG 60.436 66.667 13.96 0.00 0.00 5.69
736 737 3.241530 TGTCTTGGAGGCTGCCGT 61.242 61.111 13.96 1.21 0.00 5.68
737 738 2.032681 GTCTTGGAGGCTGCCGTT 59.967 61.111 13.96 0.00 0.00 4.44
738 739 2.035442 GTCTTGGAGGCTGCCGTTC 61.035 63.158 13.96 6.18 0.00 3.95
739 740 2.747855 CTTGGAGGCTGCCGTTCC 60.748 66.667 17.67 17.67 0.00 3.62
740 741 3.551496 CTTGGAGGCTGCCGTTCCA 62.551 63.158 21.96 21.96 39.16 3.53
741 742 3.551496 TTGGAGGCTGCCGTTCCAG 62.551 63.158 23.76 0.00 41.68 3.86
742 743 4.785453 GGAGGCTGCCGTTCCAGG 62.785 72.222 19.15 0.00 33.44 4.45
743 744 4.785453 GAGGCTGCCGTTCCAGGG 62.785 72.222 13.96 0.00 33.44 4.45
745 746 4.344865 GGCTGCCGTTCCAGGGAA 62.345 66.667 1.35 0.00 33.44 3.97
746 747 2.044946 GCTGCCGTTCCAGGGAAT 60.045 61.111 3.73 0.00 36.45 3.01
747 748 2.115291 GCTGCCGTTCCAGGGAATC 61.115 63.158 3.73 0.00 36.45 2.52
748 749 1.604378 CTGCCGTTCCAGGGAATCT 59.396 57.895 3.73 0.00 36.45 2.40
749 750 0.745845 CTGCCGTTCCAGGGAATCTG 60.746 60.000 3.73 0.00 43.00 2.90
750 751 1.198094 TGCCGTTCCAGGGAATCTGA 61.198 55.000 3.73 0.00 46.18 3.27
752 753 1.416401 GCCGTTCCAGGGAATCTGATA 59.584 52.381 3.73 0.00 46.18 2.15
753 754 2.807108 GCCGTTCCAGGGAATCTGATAC 60.807 54.545 3.73 0.00 46.18 2.24
754 755 2.434336 CCGTTCCAGGGAATCTGATACA 59.566 50.000 3.73 0.00 46.18 2.29
755 756 3.493350 CCGTTCCAGGGAATCTGATACAG 60.493 52.174 3.73 0.00 46.18 2.74
756 757 3.384789 CGTTCCAGGGAATCTGATACAGA 59.615 47.826 3.73 3.95 46.18 3.41
757 758 4.500545 CGTTCCAGGGAATCTGATACAGAG 60.501 50.000 3.73 0.00 44.08 3.35
758 759 4.271807 TCCAGGGAATCTGATACAGAGT 57.728 45.455 7.50 4.64 44.08 3.24
759 760 4.624913 TCCAGGGAATCTGATACAGAGTT 58.375 43.478 7.50 2.92 44.08 3.01
761 762 4.125703 CAGGGAATCTGATACAGAGTTGC 58.874 47.826 7.50 7.06 44.08 4.17
762 763 4.036518 AGGGAATCTGATACAGAGTTGCT 58.963 43.478 7.50 0.00 44.08 3.91
764 765 4.100808 GGGAATCTGATACAGAGTTGCTCT 59.899 45.833 7.50 0.00 44.08 4.09
765 766 5.303078 GGGAATCTGATACAGAGTTGCTCTA 59.697 44.000 7.50 0.00 44.08 2.43
766 767 6.183360 GGGAATCTGATACAGAGTTGCTCTAA 60.183 42.308 7.50 0.00 44.08 2.10
767 768 6.699642 GGAATCTGATACAGAGTTGCTCTAAC 59.300 42.308 7.50 0.00 44.08 2.34
768 769 5.236655 TCTGATACAGAGTTGCTCTAACG 57.763 43.478 0.00 0.00 44.15 3.18
769 770 4.941873 TCTGATACAGAGTTGCTCTAACGA 59.058 41.667 0.00 0.00 44.15 3.85
770 771 5.414765 TCTGATACAGAGTTGCTCTAACGAA 59.585 40.000 0.00 0.00 44.15 3.85
978 6488 5.050972 ACACAAAAAGAAGTCGAGATTCGTC 60.051 40.000 5.01 0.00 41.35 4.20
1208 6916 1.816074 TTTCGGACTTGTATGTGGGC 58.184 50.000 0.00 0.00 0.00 5.36
1397 7106 1.737363 GCCGTCTTCTCATGGTGAGTC 60.737 57.143 6.83 0.00 44.58 3.36
1439 7164 2.376956 CAAGCGCTCGATAGTGAGTAC 58.623 52.381 12.06 0.00 38.28 2.73
1442 7261 3.061322 AGCGCTCGATAGTGAGTACTAG 58.939 50.000 2.64 0.00 42.36 2.57
1449 7271 6.144402 GCTCGATAGTGAGTACTAGTGACTAC 59.856 46.154 5.39 0.00 42.36 2.73
1453 7275 8.828644 CGATAGTGAGTACTAGTGACTACAAAT 58.171 37.037 5.39 0.00 42.36 2.32
1859 7712 2.280552 AACGCGCAGTTCCCTCCTA 61.281 57.895 5.73 0.00 39.16 2.94
1864 7717 2.901042 CAGTTCCCTCCTACCGCC 59.099 66.667 0.00 0.00 0.00 6.13
1942 7801 3.677648 GCACCCAACCAGCAGCAG 61.678 66.667 0.00 0.00 0.00 4.24
1943 7802 3.677648 CACCCAACCAGCAGCAGC 61.678 66.667 0.00 0.00 42.56 5.25
1944 7803 4.208403 ACCCAACCAGCAGCAGCA 62.208 61.111 3.17 0.00 45.49 4.41
1945 7804 3.371063 CCCAACCAGCAGCAGCAG 61.371 66.667 3.17 0.00 45.49 4.24
1946 7805 4.052229 CCAACCAGCAGCAGCAGC 62.052 66.667 3.17 0.46 45.49 5.25
1947 7806 3.292159 CAACCAGCAGCAGCAGCA 61.292 61.111 12.92 0.00 45.49 4.41
1948 7807 2.984155 AACCAGCAGCAGCAGCAG 60.984 61.111 12.92 3.65 45.49 4.24
1964 7823 2.033757 AGCAGCAGCAGTTCCCAG 59.966 61.111 3.17 0.00 45.49 4.45
2178 8131 3.294102 CATGCATCCGTGATTTCGATTG 58.706 45.455 0.00 0.00 0.00 2.67
2253 8206 4.395231 GCCCCTGTATTCTTGTGTTACTTC 59.605 45.833 0.00 0.00 0.00 3.01
2254 8207 5.803470 GCCCCTGTATTCTTGTGTTACTTCT 60.803 44.000 0.00 0.00 0.00 2.85
2255 8208 5.643777 CCCCTGTATTCTTGTGTTACTTCTG 59.356 44.000 0.00 0.00 0.00 3.02
2267 8225 3.055819 TGTTACTTCTGGAGGATCAGCAC 60.056 47.826 0.00 0.00 36.25 4.40
2270 8228 1.554160 CTTCTGGAGGATCAGCACAGT 59.446 52.381 0.00 0.00 36.25 3.55
2278 8236 4.702131 GGAGGATCAGCACAGTTTGTTTAT 59.298 41.667 0.00 0.00 36.25 1.40
2292 8258 6.910433 CAGTTTGTTTATTGCTCTACGTTTGT 59.090 34.615 0.00 0.00 0.00 2.83
2351 8320 2.781646 GCAACGCGGCAATTAATTACTC 59.218 45.455 12.47 0.00 0.00 2.59
2352 8321 3.359654 CAACGCGGCAATTAATTACTCC 58.640 45.455 12.47 2.29 0.00 3.85
2353 8322 2.914059 ACGCGGCAATTAATTACTCCT 58.086 42.857 12.47 0.00 0.00 3.69
2354 8323 4.062677 ACGCGGCAATTAATTACTCCTA 57.937 40.909 12.47 0.00 0.00 2.94
2355 8324 3.805971 ACGCGGCAATTAATTACTCCTAC 59.194 43.478 12.47 0.00 0.00 3.18
2356 8325 4.056050 CGCGGCAATTAATTACTCCTACT 58.944 43.478 0.00 0.00 0.00 2.57
2357 8326 4.510340 CGCGGCAATTAATTACTCCTACTT 59.490 41.667 0.00 0.00 0.00 2.24
2358 8327 5.693104 CGCGGCAATTAATTACTCCTACTTA 59.307 40.000 0.00 0.00 0.00 2.24
2359 8328 6.367969 CGCGGCAATTAATTACTCCTACTTAT 59.632 38.462 0.00 0.00 0.00 1.73
2360 8329 7.095355 CGCGGCAATTAATTACTCCTACTTATT 60.095 37.037 0.00 0.00 0.00 1.40
2361 8330 9.211485 GCGGCAATTAATTACTCCTACTTATTA 57.789 33.333 0.00 0.00 0.00 0.98
2387 8356 6.648725 ACTTGCTTATTGTCGCTTTACTAG 57.351 37.500 0.00 0.00 0.00 2.57
2393 8362 7.598869 TGCTTATTGTCGCTTTACTAGATATGG 59.401 37.037 0.00 0.00 0.00 2.74
2420 8400 1.473965 GGGATCATGCTTCGCTTCTCA 60.474 52.381 0.00 0.00 0.00 3.27
2433 8413 3.442625 TCGCTTCTCATCCTTTCGAGTTA 59.557 43.478 0.00 0.00 0.00 2.24
2449 8429 3.370276 GAGTTATAGCCGACGACTTTCC 58.630 50.000 0.00 0.00 0.00 3.13
2489 8469 0.241749 CGATGGCAATGCAAGTGTGT 59.758 50.000 7.79 0.00 32.28 3.72
2506 8487 1.400494 GTGTAACCACCCGATTCATGC 59.600 52.381 0.00 0.00 35.44 4.06
2561 10921 1.203523 ACCTGATCACTCGTTCAGCTC 59.796 52.381 0.00 0.00 37.56 4.09
2572 10932 1.718672 CGTTCAGCTCGTTTTTCGCTC 60.719 52.381 0.00 0.00 39.67 5.03
2601 10961 2.534298 CATTCTAGTCTGACACCAGCG 58.466 52.381 10.88 0.00 40.20 5.18
2609 11342 1.202758 TCTGACACCAGCGGTCAAAAT 60.203 47.619 0.00 0.00 44.04 1.82
2622 11355 3.127030 CGGTCAAAATTAGGAGCTCAACC 59.873 47.826 17.19 0.00 0.00 3.77
2635 11368 1.148310 CTCAACCGCACCTGTTACTG 58.852 55.000 0.00 0.00 0.00 2.74
2643 11376 1.602377 GCACCTGTTACTGCGAACTTT 59.398 47.619 0.00 0.00 0.00 2.66
2692 11434 6.698008 TGGATTTGGCTCAGTACATAAATG 57.302 37.500 0.00 0.00 0.00 2.32
2699 11441 6.389091 TGGCTCAGTACATAAATGCAAAAAG 58.611 36.000 0.00 0.00 0.00 2.27
2700 11442 5.807011 GGCTCAGTACATAAATGCAAAAAGG 59.193 40.000 0.00 0.00 0.00 3.11
2777 11519 0.976641 TGCTAGTGAAGGTGGTCTGG 59.023 55.000 0.00 0.00 0.00 3.86
2828 11570 1.202200 CGTGAAGTTTTTGCACCCGAA 60.202 47.619 0.00 0.00 0.00 4.30
2926 11668 5.766222 ACAAATGTTCTAAGAGCTTGCAAG 58.234 37.500 22.44 22.44 0.00 4.01
2951 11693 8.152246 AGGTTTCATCATGAAATCACATTTGTT 58.848 29.630 22.74 0.00 46.90 2.83
2964 11707 6.654793 TCACATTTGTTAAAGTTTGCCAAC 57.345 33.333 0.00 0.00 0.00 3.77
3037 11789 2.743636 TTTGAGCTCGGGTGTAGAAG 57.256 50.000 9.64 0.00 0.00 2.85
3038 11790 0.246635 TTGAGCTCGGGTGTAGAAGC 59.753 55.000 9.64 0.00 0.00 3.86
3042 11798 1.077089 GCTCGGGTGTAGAAGCGTTC 61.077 60.000 0.00 0.00 0.00 3.95
3045 11801 0.797249 CGGGTGTAGAAGCGTTCGAG 60.797 60.000 0.00 0.00 34.02 4.04
3055 11811 2.510768 AGCGTTCGAGTTTTCTCACT 57.489 45.000 0.00 0.00 46.47 3.41
3056 11812 2.395654 AGCGTTCGAGTTTTCTCACTC 58.604 47.619 0.00 0.00 46.47 3.51
3077 11833 3.952323 TCCTCTTAGTGATTGGTACGAGG 59.048 47.826 0.00 0.00 38.46 4.63
3083 11839 3.698289 AGTGATTGGTACGAGGAGAGAA 58.302 45.455 0.00 0.00 0.00 2.87
3095 11851 4.885325 ACGAGGAGAGAAAGAGAATACCTC 59.115 45.833 0.00 0.00 42.28 3.85
3096 11852 4.884744 CGAGGAGAGAAAGAGAATACCTCA 59.115 45.833 0.00 0.00 44.40 3.86
3097 11853 5.534654 CGAGGAGAGAAAGAGAATACCTCAT 59.465 44.000 0.00 0.00 44.40 2.90
3098 11854 6.712998 CGAGGAGAGAAAGAGAATACCTCATA 59.287 42.308 0.00 0.00 44.40 2.15
3099 11855 7.393234 CGAGGAGAGAAAGAGAATACCTCATAT 59.607 40.741 0.00 0.00 44.40 1.78
3105 11861 6.926272 AGAAAGAGAATACCTCATATGTTCGC 59.074 38.462 1.90 0.99 44.40 4.70
3108 11864 5.047660 AGAGAATACCTCATATGTTCGCCTC 60.048 44.000 1.90 3.13 44.40 4.70
3122 11878 4.154347 CCTCGCCTGGCCTGTCTC 62.154 72.222 14.12 0.00 0.00 3.36
3130 11886 2.025767 CTGGCCTGTCTCGGAGATGG 62.026 65.000 19.32 19.32 33.89 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.739039 TGATTCAATCACATTCGGTTTCTAATT 58.261 29.630 0.00 0.00 33.59 1.40
1 2 8.279970 TGATTCAATCACATTCGGTTTCTAAT 57.720 30.769 0.00 0.00 33.59 1.73
2 3 7.680442 TGATTCAATCACATTCGGTTTCTAA 57.320 32.000 0.00 0.00 33.59 2.10
3 4 7.254421 CGATGATTCAATCACATTCGGTTTCTA 60.254 37.037 12.26 0.00 43.01 2.10
4 5 6.457392 CGATGATTCAATCACATTCGGTTTCT 60.457 38.462 12.26 0.00 43.01 2.52
5 6 5.678483 CGATGATTCAATCACATTCGGTTTC 59.322 40.000 12.26 0.00 43.01 2.78
6 7 5.572211 CGATGATTCAATCACATTCGGTTT 58.428 37.500 12.26 0.00 43.01 3.27
7 8 4.496341 GCGATGATTCAATCACATTCGGTT 60.496 41.667 18.84 0.00 43.01 4.44
8 9 3.002656 GCGATGATTCAATCACATTCGGT 59.997 43.478 18.84 0.00 43.01 4.69
9 10 3.548587 GCGATGATTCAATCACATTCGG 58.451 45.455 18.84 5.82 43.01 4.30
10 11 3.060339 TCGCGATGATTCAATCACATTCG 60.060 43.478 14.82 14.82 43.01 3.34
11 12 4.452447 CTCGCGATGATTCAATCACATTC 58.548 43.478 10.36 0.00 43.01 2.67
12 13 3.249320 CCTCGCGATGATTCAATCACATT 59.751 43.478 10.36 0.00 43.01 2.71
13 14 2.804527 CCTCGCGATGATTCAATCACAT 59.195 45.455 10.36 0.00 43.01 3.21
17 18 4.270084 TGTTAACCTCGCGATGATTCAATC 59.730 41.667 18.54 0.00 0.00 2.67
18 19 4.188462 TGTTAACCTCGCGATGATTCAAT 58.812 39.130 18.54 0.00 0.00 2.57
19 20 3.591023 TGTTAACCTCGCGATGATTCAA 58.409 40.909 18.54 1.40 0.00 2.69
22 23 5.597806 TCTATTGTTAACCTCGCGATGATT 58.402 37.500 18.54 11.15 0.00 2.57
25 26 5.712217 TTTCTATTGTTAACCTCGCGATG 57.288 39.130 10.36 10.15 0.00 3.84
26 27 6.715464 CAATTTCTATTGTTAACCTCGCGAT 58.285 36.000 10.36 0.00 37.06 4.58
27 28 6.102006 CAATTTCTATTGTTAACCTCGCGA 57.898 37.500 9.26 9.26 37.06 5.87
39 40 3.500982 CACGCCACCACAATTTCTATTG 58.499 45.455 0.00 0.00 45.39 1.90
40 41 2.491693 CCACGCCACCACAATTTCTATT 59.508 45.455 0.00 0.00 0.00 1.73
42 43 1.529226 CCACGCCACCACAATTTCTA 58.471 50.000 0.00 0.00 0.00 2.10
43 44 1.805428 GCCACGCCACCACAATTTCT 61.805 55.000 0.00 0.00 0.00 2.52
44 45 1.372872 GCCACGCCACCACAATTTC 60.373 57.895 0.00 0.00 0.00 2.17
45 46 1.470996 ATGCCACGCCACCACAATTT 61.471 50.000 0.00 0.00 0.00 1.82
46 47 1.876497 GATGCCACGCCACCACAATT 61.876 55.000 0.00 0.00 0.00 2.32
48 49 2.983030 GATGCCACGCCACCACAA 60.983 61.111 0.00 0.00 0.00 3.33
49 50 3.565961 ATGATGCCACGCCACCACA 62.566 57.895 0.00 0.00 0.00 4.17
50 51 1.029408 TAATGATGCCACGCCACCAC 61.029 55.000 0.00 0.00 0.00 4.16
51 52 0.747644 CTAATGATGCCACGCCACCA 60.748 55.000 0.00 0.00 0.00 4.17
52 53 2.024918 CTAATGATGCCACGCCACC 58.975 57.895 0.00 0.00 0.00 4.61
53 54 1.356624 GCTAATGATGCCACGCCAC 59.643 57.895 0.00 0.00 0.00 5.01
54 55 0.466007 ATGCTAATGATGCCACGCCA 60.466 50.000 0.00 0.00 0.00 5.69
56 57 0.039798 CCATGCTAATGATGCCACGC 60.040 55.000 0.00 0.00 35.67 5.34
57 58 0.594602 CCCATGCTAATGATGCCACG 59.405 55.000 0.00 0.00 35.67 4.94
58 59 1.985473 TCCCATGCTAATGATGCCAC 58.015 50.000 0.00 0.00 35.67 5.01
62 63 7.164122 ACTACAGTAATCCCATGCTAATGATG 58.836 38.462 0.00 0.00 35.67 3.07
63 64 7.321717 ACTACAGTAATCCCATGCTAATGAT 57.678 36.000 0.00 0.00 35.67 2.45
64 65 6.747414 ACTACAGTAATCCCATGCTAATGA 57.253 37.500 0.00 0.00 35.67 2.57
75 76 7.924947 GCCCGGATAATTATACTACAGTAATCC 59.075 40.741 0.73 6.86 33.07 3.01
77 78 7.123247 ACGCCCGGATAATTATACTACAGTAAT 59.877 37.037 0.73 0.00 33.76 1.89
78 79 6.434028 ACGCCCGGATAATTATACTACAGTAA 59.566 38.462 0.73 0.00 33.76 2.24
79 80 5.945784 ACGCCCGGATAATTATACTACAGTA 59.054 40.000 0.73 0.00 34.67 2.74
80 81 4.768968 ACGCCCGGATAATTATACTACAGT 59.231 41.667 0.73 0.00 0.00 3.55
82 83 5.726980 AACGCCCGGATAATTATACTACA 57.273 39.130 0.73 0.00 0.00 2.74
83 84 6.620678 TGTAACGCCCGGATAATTATACTAC 58.379 40.000 0.73 1.73 0.00 2.73
84 85 6.832520 TGTAACGCCCGGATAATTATACTA 57.167 37.500 0.73 0.00 0.00 1.82
85 86 5.726980 TGTAACGCCCGGATAATTATACT 57.273 39.130 0.73 0.00 0.00 2.12
86 87 5.120674 GGTTGTAACGCCCGGATAATTATAC 59.879 44.000 0.73 0.00 0.00 1.47
87 88 5.237048 GGTTGTAACGCCCGGATAATTATA 58.763 41.667 0.73 0.00 0.00 0.98
88 89 4.067192 GGTTGTAACGCCCGGATAATTAT 58.933 43.478 0.73 0.00 0.00 1.28
90 91 2.291365 GGTTGTAACGCCCGGATAATT 58.709 47.619 0.73 0.00 0.00 1.40
93 94 1.141449 CGGTTGTAACGCCCGGATA 59.859 57.895 0.73 0.00 38.09 2.59
94 95 2.125431 CGGTTGTAACGCCCGGAT 60.125 61.111 0.73 0.00 38.09 4.18
96 97 3.113979 GTCGGTTGTAACGCCCGG 61.114 66.667 0.00 0.00 41.98 5.73
97 98 3.113979 GGTCGGTTGTAACGCCCG 61.114 66.667 0.00 0.00 43.03 6.13
99 100 0.390735 ATGAGGTCGGTTGTAACGCC 60.391 55.000 0.00 0.00 0.00 5.68
100 101 1.127951 CAATGAGGTCGGTTGTAACGC 59.872 52.381 0.00 0.00 0.00 4.84
101 102 2.409975 ACAATGAGGTCGGTTGTAACG 58.590 47.619 0.00 0.00 34.55 3.18
111 112 1.298859 GGTGTGCCGACAATGAGGTC 61.299 60.000 0.00 0.00 32.49 3.85
112 113 1.302511 GGTGTGCCGACAATGAGGT 60.303 57.895 0.00 0.00 32.49 3.85
114 115 0.320683 TCAGGTGTGCCGACAATGAG 60.321 55.000 0.00 0.00 40.50 2.90
115 116 0.602638 GTCAGGTGTGCCGACAATGA 60.603 55.000 0.00 0.00 40.50 2.57
116 117 1.868997 GTCAGGTGTGCCGACAATG 59.131 57.895 0.00 0.00 40.50 2.82
117 118 1.667830 CGTCAGGTGTGCCGACAAT 60.668 57.895 0.00 0.00 40.50 2.71
118 119 2.279851 CGTCAGGTGTGCCGACAA 60.280 61.111 0.00 0.00 40.50 3.18
125 126 2.859273 GATCTGGCCCGTCAGGTGTG 62.859 65.000 0.00 0.00 38.26 3.82
126 127 2.607750 ATCTGGCCCGTCAGGTGT 60.608 61.111 0.00 0.00 38.26 4.16
127 128 2.187946 GATCTGGCCCGTCAGGTG 59.812 66.667 0.00 0.00 38.26 4.00
128 129 2.039624 AGATCTGGCCCGTCAGGT 59.960 61.111 0.00 0.00 38.26 4.00
130 131 1.142748 GTCAGATCTGGCCCGTCAG 59.857 63.158 22.42 0.00 36.17 3.51
131 132 1.305297 AGTCAGATCTGGCCCGTCA 60.305 57.895 23.51 0.00 35.39 4.35
132 133 1.439644 GAGTCAGATCTGGCCCGTC 59.560 63.158 23.51 11.27 35.39 4.79
133 134 2.060980 GGAGTCAGATCTGGCCCGT 61.061 63.158 23.51 5.40 35.39 5.28
134 135 1.743321 GAGGAGTCAGATCTGGCCCG 61.743 65.000 23.51 0.00 35.39 6.13
135 136 0.689080 TGAGGAGTCAGATCTGGCCC 60.689 60.000 23.51 22.00 35.39 5.80
136 137 2.907703 TGAGGAGTCAGATCTGGCC 58.092 57.895 23.51 19.84 35.39 5.36
146 147 2.486042 GCGTCGTCCTGAGGAGTC 59.514 66.667 0.00 0.00 34.34 3.36
147 148 3.063084 GGCGTCGTCCTGAGGAGT 61.063 66.667 0.00 0.00 34.34 3.85
149 150 3.371063 GTGGCGTCGTCCTGAGGA 61.371 66.667 0.00 0.00 34.34 3.71
151 152 4.778415 CCGTGGCGTCGTCCTGAG 62.778 72.222 0.00 0.00 0.00 3.35
155 156 3.186047 CATTCCGTGGCGTCGTCC 61.186 66.667 0.00 0.00 0.00 4.79
156 157 3.849953 GCATTCCGTGGCGTCGTC 61.850 66.667 0.00 0.00 0.00 4.20
157 158 4.373116 AGCATTCCGTGGCGTCGT 62.373 61.111 0.00 0.00 34.54 4.34
159 160 4.166011 GCAGCATTCCGTGGCGTC 62.166 66.667 0.00 0.00 34.54 5.19
162 163 2.146073 AAACTGCAGCATTCCGTGGC 62.146 55.000 15.27 0.00 0.00 5.01
163 164 0.314935 AAAACTGCAGCATTCCGTGG 59.685 50.000 15.27 0.00 0.00 4.94
164 165 1.689959 GAAAACTGCAGCATTCCGTG 58.310 50.000 15.27 0.00 0.00 4.94
165 166 0.238289 CGAAAACTGCAGCATTCCGT 59.762 50.000 15.27 0.00 0.00 4.69
166 167 0.454957 CCGAAAACTGCAGCATTCCG 60.455 55.000 15.27 9.12 0.00 4.30
168 169 0.733909 GGCCGAAAACTGCAGCATTC 60.734 55.000 15.27 16.83 0.00 2.67
171 172 3.659092 CGGCCGAAAACTGCAGCA 61.659 61.111 24.07 0.00 0.00 4.41
173 174 4.404654 GGCGGCCGAAAACTGCAG 62.405 66.667 33.48 13.48 41.37 4.41
197 198 4.803426 GACGGCTGCCTCACTCGG 62.803 72.222 17.92 1.20 0.00 4.63
199 200 2.433318 GTGACGGCTGCCTCACTC 60.433 66.667 28.52 15.54 34.99 3.51
200 201 2.116983 ATTGTGACGGCTGCCTCACT 62.117 55.000 31.94 20.49 38.12 3.41
201 202 1.672356 ATTGTGACGGCTGCCTCAC 60.672 57.895 28.82 28.82 37.83 3.51
203 204 3.044059 GCATTGTGACGGCTGCCTC 62.044 63.158 17.92 13.36 0.00 4.70
205 206 4.120331 GGCATTGTGACGGCTGCC 62.120 66.667 9.11 9.11 46.54 4.85
207 208 0.108186 TCTAGGCATTGTGACGGCTG 60.108 55.000 0.00 0.00 38.66 4.85
208 209 0.176680 CTCTAGGCATTGTGACGGCT 59.823 55.000 0.00 0.00 41.51 5.52
210 211 1.204704 TGACTCTAGGCATTGTGACGG 59.795 52.381 0.00 0.00 0.00 4.79
211 212 2.263077 GTGACTCTAGGCATTGTGACG 58.737 52.381 0.00 0.00 0.00 4.35
212 213 2.622436 GGTGACTCTAGGCATTGTGAC 58.378 52.381 0.00 0.00 0.00 3.67
213 214 1.204704 CGGTGACTCTAGGCATTGTGA 59.795 52.381 0.00 0.00 0.00 3.58
214 215 1.204704 TCGGTGACTCTAGGCATTGTG 59.795 52.381 0.00 0.00 0.00 3.33
215 216 1.557099 TCGGTGACTCTAGGCATTGT 58.443 50.000 0.00 0.00 0.00 2.71
217 218 2.457598 TCTTCGGTGACTCTAGGCATT 58.542 47.619 0.00 0.00 0.00 3.56
220 221 2.025155 TCATCTTCGGTGACTCTAGGC 58.975 52.381 0.00 0.00 0.00 3.93
222 223 2.034053 GGCTCATCTTCGGTGACTCTAG 59.966 54.545 0.00 0.00 0.00 2.43
224 225 0.820871 GGCTCATCTTCGGTGACTCT 59.179 55.000 0.00 0.00 0.00 3.24
226 227 0.247736 GTGGCTCATCTTCGGTGACT 59.752 55.000 0.00 0.00 0.00 3.41
228 229 1.596934 GGTGGCTCATCTTCGGTGA 59.403 57.895 0.00 0.00 0.00 4.02
229 230 1.450312 GGGTGGCTCATCTTCGGTG 60.450 63.158 0.00 0.00 0.00 4.94
230 231 1.201429 AAGGGTGGCTCATCTTCGGT 61.201 55.000 0.00 0.00 0.00 4.69
231 232 0.462759 GAAGGGTGGCTCATCTTCGG 60.463 60.000 6.28 0.00 0.00 4.30
232 233 0.250234 TGAAGGGTGGCTCATCTTCG 59.750 55.000 13.28 0.00 38.63 3.79
233 234 1.680249 GGTGAAGGGTGGCTCATCTTC 60.680 57.143 12.06 12.06 36.93 2.87
234 235 0.329596 GGTGAAGGGTGGCTCATCTT 59.670 55.000 0.00 0.00 0.00 2.40
235 236 0.842030 TGGTGAAGGGTGGCTCATCT 60.842 55.000 0.00 0.00 0.00 2.90
236 237 0.678048 GTGGTGAAGGGTGGCTCATC 60.678 60.000 0.00 0.00 0.00 2.92
238 239 2.836154 GTGGTGAAGGGTGGCTCA 59.164 61.111 0.00 0.00 0.00 4.26
239 240 2.358737 CGTGGTGAAGGGTGGCTC 60.359 66.667 0.00 0.00 0.00 4.70
243 244 2.358737 GGCTCGTGGTGAAGGGTG 60.359 66.667 0.00 0.00 0.00 4.61
244 245 1.779061 ATTGGCTCGTGGTGAAGGGT 61.779 55.000 0.00 0.00 0.00 4.34
245 246 1.002134 ATTGGCTCGTGGTGAAGGG 60.002 57.895 0.00 0.00 0.00 3.95
247 248 1.503542 GCATTGGCTCGTGGTGAAG 59.496 57.895 0.00 0.00 36.96 3.02
248 249 1.971167 GGCATTGGCTCGTGGTGAA 60.971 57.895 2.42 0.00 40.87 3.18
250 251 3.803082 CGGCATTGGCTCGTGGTG 61.803 66.667 8.71 0.00 40.87 4.17
270 271 1.447314 GAATCCGGGTGGTGACGTC 60.447 63.158 9.11 9.11 36.30 4.34
271 272 2.660802 GAATCCGGGTGGTGACGT 59.339 61.111 0.00 0.00 36.30 4.34
272 273 2.125269 GGAATCCGGGTGGTGACG 60.125 66.667 0.00 0.00 36.30 4.35
276 277 2.530661 TGTGGGAATCCGGGTGGT 60.531 61.111 0.00 0.00 36.30 4.16
277 278 2.045340 GTGTGGGAATCCGGGTGG 60.045 66.667 0.00 0.00 35.24 4.61
279 280 2.605295 TCGTGTGGGAATCCGGGT 60.605 61.111 0.00 0.00 35.24 5.28
280 281 1.895020 TTCTCGTGTGGGAATCCGGG 61.895 60.000 0.00 0.00 35.24 5.73
281 282 0.739813 GTTCTCGTGTGGGAATCCGG 60.740 60.000 0.00 0.00 35.24 5.14
283 284 0.739813 CGGTTCTCGTGTGGGAATCC 60.740 60.000 0.00 0.00 0.00 3.01
284 285 1.359459 GCGGTTCTCGTGTGGGAATC 61.359 60.000 0.00 0.00 41.72 2.52
286 287 2.029964 GCGGTTCTCGTGTGGGAA 59.970 61.111 0.00 0.00 41.72 3.97
287 288 3.998672 GGCGGTTCTCGTGTGGGA 61.999 66.667 0.00 0.00 41.72 4.37
289 290 3.041940 GTGGCGGTTCTCGTGTGG 61.042 66.667 0.00 0.00 41.72 4.17
290 291 2.279851 TGTGGCGGTTCTCGTGTG 60.280 61.111 0.00 0.00 41.72 3.82
291 292 2.029073 CTGTGGCGGTTCTCGTGT 59.971 61.111 0.00 0.00 41.72 4.49
294 295 4.680237 TGGCTGTGGCGGTTCTCG 62.680 66.667 0.00 0.00 39.81 4.04
296 297 4.988598 CGTGGCTGTGGCGGTTCT 62.989 66.667 0.00 0.00 39.81 3.01
303 304 1.741770 GTTCTAGGCGTGGCTGTGG 60.742 63.158 6.15 0.00 0.00 4.17
304 305 1.741770 GGTTCTAGGCGTGGCTGTG 60.742 63.158 6.15 0.00 0.00 3.66
305 306 1.553690 ATGGTTCTAGGCGTGGCTGT 61.554 55.000 6.15 0.00 0.00 4.40
308 309 1.819632 CCATGGTTCTAGGCGTGGC 60.820 63.158 2.57 0.00 0.00 5.01
309 310 1.819632 GCCATGGTTCTAGGCGTGG 60.820 63.158 14.67 0.00 38.86 4.94
310 311 3.813596 GCCATGGTTCTAGGCGTG 58.186 61.111 14.67 0.00 38.86 5.34
314 315 1.048724 TCCTCCGCCATGGTTCTAGG 61.049 60.000 14.67 14.75 39.52 3.02
315 316 0.830648 TTCCTCCGCCATGGTTCTAG 59.169 55.000 14.67 6.11 39.52 2.43
316 317 1.140852 CATTCCTCCGCCATGGTTCTA 59.859 52.381 14.67 0.00 39.52 2.10
317 318 0.107017 CATTCCTCCGCCATGGTTCT 60.107 55.000 14.67 0.00 39.52 3.01
318 319 1.728490 GCATTCCTCCGCCATGGTTC 61.728 60.000 14.67 0.00 39.52 3.62
319 320 1.754234 GCATTCCTCCGCCATGGTT 60.754 57.895 14.67 0.00 39.52 3.67
320 321 2.124151 GCATTCCTCCGCCATGGT 60.124 61.111 14.67 0.00 39.52 3.55
327 328 4.891727 CGACGGGGCATTCCTCCG 62.892 72.222 9.16 9.16 45.64 4.63
346 347 3.866582 GAGTGGGGGAGGATGGCG 61.867 72.222 0.00 0.00 0.00 5.69
347 348 3.866582 CGAGTGGGGGAGGATGGC 61.867 72.222 0.00 0.00 0.00 4.40
348 349 3.164269 CCGAGTGGGGGAGGATGG 61.164 72.222 0.00 0.00 0.00 3.51
368 369 2.046700 GGATCACCGTCGGGCAAA 60.047 61.111 17.28 0.00 36.48 3.68
380 381 3.770040 CCTGCCACCGTCGGATCA 61.770 66.667 20.51 11.09 0.00 2.92
407 408 2.207924 ATCTAGGGTTAGGCCGCCG 61.208 63.158 3.05 0.00 38.44 6.46
408 409 1.371558 CATCTAGGGTTAGGCCGCC 59.628 63.158 0.00 0.00 38.44 6.13
421 422 5.281454 CCCATCTCTCTCTCATACCCATCTA 60.281 48.000 0.00 0.00 0.00 1.98
422 423 4.510748 CCCATCTCTCTCTCATACCCATCT 60.511 50.000 0.00 0.00 0.00 2.90
423 424 3.768757 CCCATCTCTCTCTCATACCCATC 59.231 52.174 0.00 0.00 0.00 3.51
424 425 3.143741 ACCCATCTCTCTCTCATACCCAT 59.856 47.826 0.00 0.00 0.00 4.00
425 426 2.520120 ACCCATCTCTCTCTCATACCCA 59.480 50.000 0.00 0.00 0.00 4.51
426 427 3.252554 ACCCATCTCTCTCTCATACCC 57.747 52.381 0.00 0.00 0.00 3.69
428 429 5.208463 GGAAACCCATCTCTCTCTCATAC 57.792 47.826 0.00 0.00 0.00 2.39
446 447 0.178926 TGGACAGGGTACGAGGGAAA 60.179 55.000 0.00 0.00 0.00 3.13
447 448 0.042131 ATGGACAGGGTACGAGGGAA 59.958 55.000 0.00 0.00 0.00 3.97
448 449 0.686441 CATGGACAGGGTACGAGGGA 60.686 60.000 0.00 0.00 0.00 4.20
450 451 1.823295 CCATGGACAGGGTACGAGG 59.177 63.158 5.56 0.00 0.00 4.63
451 452 1.144057 GCCATGGACAGGGTACGAG 59.856 63.158 18.40 0.00 34.16 4.18
452 453 0.907704 AAGCCATGGACAGGGTACGA 60.908 55.000 18.40 0.00 35.44 3.43
454 455 0.328258 ACAAGCCATGGACAGGGTAC 59.672 55.000 18.40 0.00 35.44 3.34
456 457 0.540365 CAACAAGCCATGGACAGGGT 60.540 55.000 18.40 2.31 38.81 4.34
457 458 0.540365 ACAACAAGCCATGGACAGGG 60.540 55.000 18.40 0.00 34.91 4.45
458 459 1.812571 GTACAACAAGCCATGGACAGG 59.187 52.381 18.40 3.59 30.45 4.00
460 461 1.546773 GGGTACAACAAGCCATGGACA 60.547 52.381 18.40 0.00 36.99 4.02
461 462 1.173913 GGGTACAACAAGCCATGGAC 58.826 55.000 18.40 7.03 36.99 4.02
462 463 0.774276 TGGGTACAACAAGCCATGGA 59.226 50.000 18.40 0.00 41.99 3.41
463 464 1.176527 CTGGGTACAACAAGCCATGG 58.823 55.000 7.63 7.63 45.54 3.66
465 466 1.705186 AGTCTGGGTACAACAAGCCAT 59.295 47.619 0.00 0.00 45.54 4.40
467 468 2.152016 GAAGTCTGGGTACAACAAGCC 58.848 52.381 0.00 0.00 37.54 4.35
468 469 3.127425 AGAAGTCTGGGTACAACAAGC 57.873 47.619 0.00 0.00 0.00 4.01
469 470 5.368989 AGAAAGAAGTCTGGGTACAACAAG 58.631 41.667 0.00 0.00 0.00 3.16
470 471 5.367945 AGAAAGAAGTCTGGGTACAACAA 57.632 39.130 0.00 0.00 0.00 2.83
471 472 5.365619 GAAGAAAGAAGTCTGGGTACAACA 58.634 41.667 0.00 0.00 0.00 3.33
474 475 3.640029 ACGAAGAAAGAAGTCTGGGTACA 59.360 43.478 0.00 0.00 0.00 2.90
475 476 4.254402 ACGAAGAAAGAAGTCTGGGTAC 57.746 45.455 0.00 0.00 0.00 3.34
477 478 3.840124 AACGAAGAAAGAAGTCTGGGT 57.160 42.857 0.00 0.00 0.00 4.51
479 480 8.958043 CAAATTAAAACGAAGAAAGAAGTCTGG 58.042 33.333 0.00 0.00 0.00 3.86
502 503 9.598517 ACAGCTTTTAAAATCAATGAGTTCAAA 57.401 25.926 0.09 0.00 0.00 2.69
503 504 9.598517 AACAGCTTTTAAAATCAATGAGTTCAA 57.401 25.926 0.09 0.00 0.00 2.69
504 505 9.033481 CAACAGCTTTTAAAATCAATGAGTTCA 57.967 29.630 0.09 0.00 0.00 3.18
506 507 8.203485 TCCAACAGCTTTTAAAATCAATGAGTT 58.797 29.630 0.09 0.00 0.00 3.01
507 508 7.725251 TCCAACAGCTTTTAAAATCAATGAGT 58.275 30.769 0.09 0.00 0.00 3.41
508 509 8.767478 ATCCAACAGCTTTTAAAATCAATGAG 57.233 30.769 0.09 0.00 0.00 2.90
509 510 9.558396 AAATCCAACAGCTTTTAAAATCAATGA 57.442 25.926 0.09 0.00 0.00 2.57
518 519 9.823647 TGAACATTAAAATCCAACAGCTTTTAA 57.176 25.926 0.00 0.00 38.18 1.52
519 520 9.823647 TTGAACATTAAAATCCAACAGCTTTTA 57.176 25.926 0.00 0.00 0.00 1.52
520 521 8.729805 TTGAACATTAAAATCCAACAGCTTTT 57.270 26.923 0.00 0.00 0.00 2.27
521 522 8.729805 TTTGAACATTAAAATCCAACAGCTTT 57.270 26.923 0.00 0.00 0.00 3.51
522 523 8.611757 GTTTTGAACATTAAAATCCAACAGCTT 58.388 29.630 0.00 0.00 30.62 3.74
524 525 7.914465 TGTTTTGAACATTAAAATCCAACAGC 58.086 30.769 0.00 0.00 36.25 4.40
554 555 9.729023 TCAATTTCGCATCAATATAATTCGTTT 57.271 25.926 0.00 0.00 0.00 3.60
555 556 9.729023 TTCAATTTCGCATCAATATAATTCGTT 57.271 25.926 0.00 0.00 0.00 3.85
565 566 9.941664 CTATTCTAACTTCAATTTCGCATCAAT 57.058 29.630 0.00 0.00 0.00 2.57
566 567 8.946085 ACTATTCTAACTTCAATTTCGCATCAA 58.054 29.630 0.00 0.00 0.00 2.57
567 568 8.390354 CACTATTCTAACTTCAATTTCGCATCA 58.610 33.333 0.00 0.00 0.00 3.07
568 569 8.391106 ACACTATTCTAACTTCAATTTCGCATC 58.609 33.333 0.00 0.00 0.00 3.91
570 571 7.667043 ACACTATTCTAACTTCAATTTCGCA 57.333 32.000 0.00 0.00 0.00 5.10
577 578 9.278978 TGTGCAAATACACTATTCTAACTTCAA 57.721 29.630 0.00 0.00 41.30 2.69
578 579 8.840833 TGTGCAAATACACTATTCTAACTTCA 57.159 30.769 0.00 0.00 41.30 3.02
596 597 7.502226 CCCCTATTTCTTCTATGTATGTGCAAA 59.498 37.037 0.00 0.00 0.00 3.68
597 598 6.998074 CCCCTATTTCTTCTATGTATGTGCAA 59.002 38.462 0.00 0.00 0.00 4.08
598 599 6.101150 ACCCCTATTTCTTCTATGTATGTGCA 59.899 38.462 0.00 0.00 0.00 4.57
599 600 6.428159 CACCCCTATTTCTTCTATGTATGTGC 59.572 42.308 0.00 0.00 0.00 4.57
600 601 7.657761 GTCACCCCTATTTCTTCTATGTATGTG 59.342 40.741 0.00 0.00 0.00 3.21
601 602 7.347222 TGTCACCCCTATTTCTTCTATGTATGT 59.653 37.037 0.00 0.00 0.00 2.29
604 605 7.743116 TTGTCACCCCTATTTCTTCTATGTA 57.257 36.000 0.00 0.00 0.00 2.29
605 606 6.636454 TTGTCACCCCTATTTCTTCTATGT 57.364 37.500 0.00 0.00 0.00 2.29
608 609 7.947890 ACAATTTTGTCACCCCTATTTCTTCTA 59.052 33.333 0.00 0.00 36.50 2.10
609 610 6.782494 ACAATTTTGTCACCCCTATTTCTTCT 59.218 34.615 0.00 0.00 36.50 2.85
610 611 6.993079 ACAATTTTGTCACCCCTATTTCTTC 58.007 36.000 0.00 0.00 36.50 2.87
612 613 8.485578 TTTACAATTTTGTCACCCCTATTTCT 57.514 30.769 0.00 0.00 42.35 2.52
613 614 9.150348 CATTTACAATTTTGTCACCCCTATTTC 57.850 33.333 0.00 0.00 42.35 2.17
614 615 8.655901 ACATTTACAATTTTGTCACCCCTATTT 58.344 29.630 0.00 0.00 42.35 1.40
615 616 8.201242 ACATTTACAATTTTGTCACCCCTATT 57.799 30.769 0.00 0.00 42.35 1.73
616 617 7.790782 ACATTTACAATTTTGTCACCCCTAT 57.209 32.000 0.00 0.00 42.35 2.57
617 618 7.287927 TGAACATTTACAATTTTGTCACCCCTA 59.712 33.333 0.00 0.00 42.35 3.53
618 619 6.098982 TGAACATTTACAATTTTGTCACCCCT 59.901 34.615 0.00 0.00 42.35 4.79
619 620 6.284459 TGAACATTTACAATTTTGTCACCCC 58.716 36.000 0.00 0.00 42.35 4.95
620 621 7.494298 ACTTGAACATTTACAATTTTGTCACCC 59.506 33.333 0.00 0.00 42.35 4.61
621 622 8.419076 ACTTGAACATTTACAATTTTGTCACC 57.581 30.769 0.00 0.00 42.35 4.02
627 628 9.442047 TCCACAAACTTGAACATTTACAATTTT 57.558 25.926 0.00 0.00 32.19 1.82
628 629 9.442047 TTCCACAAACTTGAACATTTACAATTT 57.558 25.926 0.00 0.00 0.00 1.82
629 630 9.612066 ATTCCACAAACTTGAACATTTACAATT 57.388 25.926 0.00 0.00 0.00 2.32
630 631 9.260002 GATTCCACAAACTTGAACATTTACAAT 57.740 29.630 0.00 0.00 0.00 2.71
631 632 8.474025 AGATTCCACAAACTTGAACATTTACAA 58.526 29.630 0.00 0.00 0.00 2.41
632 633 7.920151 CAGATTCCACAAACTTGAACATTTACA 59.080 33.333 0.00 0.00 0.00 2.41
633 634 8.134895 TCAGATTCCACAAACTTGAACATTTAC 58.865 33.333 0.00 0.00 0.00 2.01
634 635 8.134895 GTCAGATTCCACAAACTTGAACATTTA 58.865 33.333 0.00 0.00 0.00 1.40
636 637 6.322201 AGTCAGATTCCACAAACTTGAACATT 59.678 34.615 0.00 0.00 0.00 2.71
637 638 5.829924 AGTCAGATTCCACAAACTTGAACAT 59.170 36.000 0.00 0.00 0.00 2.71
638 639 5.192927 AGTCAGATTCCACAAACTTGAACA 58.807 37.500 0.00 0.00 0.00 3.18
640 641 6.563422 CAAAGTCAGATTCCACAAACTTGAA 58.437 36.000 0.00 0.00 0.00 2.69
641 642 5.450412 GCAAAGTCAGATTCCACAAACTTGA 60.450 40.000 0.00 0.00 0.00 3.02
642 643 4.741676 GCAAAGTCAGATTCCACAAACTTG 59.258 41.667 0.00 0.00 0.00 3.16
643 644 4.498009 CGCAAAGTCAGATTCCACAAACTT 60.498 41.667 0.00 0.00 0.00 2.66
644 645 3.003689 CGCAAAGTCAGATTCCACAAACT 59.996 43.478 0.00 0.00 0.00 2.66
647 648 1.266718 GCGCAAAGTCAGATTCCACAA 59.733 47.619 0.30 0.00 0.00 3.33
648 649 0.874390 GCGCAAAGTCAGATTCCACA 59.126 50.000 0.30 0.00 0.00 4.17
650 651 0.874390 GTGCGCAAAGTCAGATTCCA 59.126 50.000 14.00 0.00 0.00 3.53
651 652 0.169009 GGTGCGCAAAGTCAGATTCC 59.831 55.000 14.00 0.00 0.00 3.01
652 653 0.179215 CGGTGCGCAAAGTCAGATTC 60.179 55.000 14.00 0.00 0.00 2.52
666 667 1.734117 GAGGTTGCAAATGCGGTGC 60.734 57.895 0.00 0.00 45.83 5.01
671 672 2.941720 TGTTTTTGGAGGTTGCAAATGC 59.058 40.909 0.00 0.00 37.52 3.56
673 674 6.772360 AATTTGTTTTTGGAGGTTGCAAAT 57.228 29.167 0.00 0.00 37.52 2.32
675 676 8.997323 CATATAATTTGTTTTTGGAGGTTGCAA 58.003 29.630 0.00 0.00 0.00 4.08
676 677 7.118971 GCATATAATTTGTTTTTGGAGGTTGCA 59.881 33.333 0.00 0.00 0.00 4.08
677 678 7.463544 GCATATAATTTGTTTTTGGAGGTTGC 58.536 34.615 0.00 0.00 0.00 4.17
678 679 7.201513 CCGCATATAATTTGTTTTTGGAGGTTG 60.202 37.037 0.00 0.00 0.00 3.77
679 680 6.816140 CCGCATATAATTTGTTTTTGGAGGTT 59.184 34.615 0.00 0.00 0.00 3.50
680 681 6.071051 ACCGCATATAATTTGTTTTTGGAGGT 60.071 34.615 0.00 0.00 0.00 3.85
681 682 6.255453 CACCGCATATAATTTGTTTTTGGAGG 59.745 38.462 0.00 0.00 0.00 4.30
683 684 5.578727 GCACCGCATATAATTTGTTTTTGGA 59.421 36.000 0.00 0.00 0.00 3.53
684 685 5.220567 GGCACCGCATATAATTTGTTTTTGG 60.221 40.000 0.00 0.00 0.00 3.28
685 686 5.499971 CGGCACCGCATATAATTTGTTTTTG 60.500 40.000 0.00 0.00 0.00 2.44
686 687 4.564769 CGGCACCGCATATAATTTGTTTTT 59.435 37.500 0.00 0.00 0.00 1.94
688 689 3.490078 CCGGCACCGCATATAATTTGTTT 60.490 43.478 2.83 0.00 38.24 2.83
694 695 1.202710 TGAACCGGCACCGCATATAAT 60.203 47.619 0.00 0.00 38.24 1.28
696 697 0.178301 TTGAACCGGCACCGCATATA 59.822 50.000 0.00 0.00 38.24 0.86
697 698 0.678366 TTTGAACCGGCACCGCATAT 60.678 50.000 0.00 0.00 38.24 1.78
698 699 0.889638 TTTTGAACCGGCACCGCATA 60.890 50.000 0.00 0.00 38.24 3.14
699 700 2.196925 TTTTGAACCGGCACCGCAT 61.197 52.632 0.00 0.00 38.24 4.73
700 701 2.829003 TTTTGAACCGGCACCGCA 60.829 55.556 0.00 0.00 38.24 5.69
701 702 2.354188 GTTTTGAACCGGCACCGC 60.354 61.111 0.00 0.00 38.24 5.68
702 703 1.008995 CAGTTTTGAACCGGCACCG 60.009 57.895 0.00 1.02 39.44 4.94
703 704 0.030235 GACAGTTTTGAACCGGCACC 59.970 55.000 0.00 0.00 0.00 5.01
704 705 1.021968 AGACAGTTTTGAACCGGCAC 58.978 50.000 0.00 0.00 0.00 5.01
706 707 1.269051 CCAAGACAGTTTTGAACCGGC 60.269 52.381 0.00 0.00 0.00 6.13
708 709 2.290641 CCTCCAAGACAGTTTTGAACCG 59.709 50.000 5.38 0.00 0.00 4.44
710 711 2.952310 AGCCTCCAAGACAGTTTTGAAC 59.048 45.455 5.38 0.00 0.00 3.18
711 712 2.951642 CAGCCTCCAAGACAGTTTTGAA 59.048 45.455 5.38 0.00 0.00 2.69
712 713 2.575532 CAGCCTCCAAGACAGTTTTGA 58.424 47.619 5.38 0.00 0.00 2.69
713 714 1.000938 GCAGCCTCCAAGACAGTTTTG 60.001 52.381 0.00 0.00 0.00 2.44
714 715 1.322442 GCAGCCTCCAAGACAGTTTT 58.678 50.000 0.00 0.00 0.00 2.43
715 716 0.538287 GGCAGCCTCCAAGACAGTTT 60.538 55.000 3.29 0.00 0.00 2.66
716 717 1.073897 GGCAGCCTCCAAGACAGTT 59.926 57.895 3.29 0.00 0.00 3.16
717 718 2.753029 GGCAGCCTCCAAGACAGT 59.247 61.111 3.29 0.00 0.00 3.55
719 720 2.731691 GAACGGCAGCCTCCAAGACA 62.732 60.000 10.54 0.00 0.00 3.41
721 722 2.347490 GAACGGCAGCCTCCAAGA 59.653 61.111 10.54 0.00 0.00 3.02
722 723 2.747855 GGAACGGCAGCCTCCAAG 60.748 66.667 13.86 0.00 0.00 3.61
723 724 3.551496 CTGGAACGGCAGCCTCCAA 62.551 63.158 20.36 7.51 38.75 3.53
724 725 4.020617 CTGGAACGGCAGCCTCCA 62.021 66.667 19.15 19.15 36.89 3.86
725 726 4.785453 CCTGGAACGGCAGCCTCC 62.785 72.222 10.54 11.46 0.00 4.30
728 729 3.645268 ATTCCCTGGAACGGCAGCC 62.645 63.158 0.00 0.00 36.91 4.85
730 731 0.745845 CAGATTCCCTGGAACGGCAG 60.746 60.000 0.00 0.00 39.23 4.85
735 736 4.407296 ACTCTGTATCAGATTCCCTGGAAC 59.593 45.833 0.00 0.00 43.12 3.62
736 737 4.624913 ACTCTGTATCAGATTCCCTGGAA 58.375 43.478 0.22 0.22 43.12 3.53
737 738 4.271807 ACTCTGTATCAGATTCCCTGGA 57.728 45.455 0.00 0.00 43.12 3.86
738 739 4.701765 CAACTCTGTATCAGATTCCCTGG 58.298 47.826 0.00 0.00 43.12 4.45
739 740 4.125703 GCAACTCTGTATCAGATTCCCTG 58.874 47.826 0.00 0.00 39.92 4.45
740 741 4.036518 AGCAACTCTGTATCAGATTCCCT 58.963 43.478 0.00 0.00 39.92 4.20
741 742 4.100808 AGAGCAACTCTGTATCAGATTCCC 59.899 45.833 0.00 0.00 39.62 3.97
742 743 5.275067 AGAGCAACTCTGTATCAGATTCC 57.725 43.478 0.00 0.00 39.62 3.01
743 744 6.416455 CGTTAGAGCAACTCTGTATCAGATTC 59.584 42.308 7.37 0.00 41.37 2.52
744 745 6.095580 TCGTTAGAGCAACTCTGTATCAGATT 59.904 38.462 7.37 0.00 41.37 2.40
745 746 5.590663 TCGTTAGAGCAACTCTGTATCAGAT 59.409 40.000 7.37 0.00 41.37 2.90
746 747 4.941873 TCGTTAGAGCAACTCTGTATCAGA 59.058 41.667 7.37 0.00 41.37 3.27
747 748 5.236655 TCGTTAGAGCAACTCTGTATCAG 57.763 43.478 7.37 0.00 41.37 2.90
748 749 5.414765 TCTTCGTTAGAGCAACTCTGTATCA 59.585 40.000 7.37 0.00 41.37 2.15
749 750 5.881447 TCTTCGTTAGAGCAACTCTGTATC 58.119 41.667 7.37 0.00 41.37 2.24
750 751 5.899120 TCTTCGTTAGAGCAACTCTGTAT 57.101 39.130 7.37 0.00 41.37 2.29
752 753 4.585955 TTCTTCGTTAGAGCAACTCTGT 57.414 40.909 7.37 0.00 41.37 3.41
753 754 5.163913 CCATTTCTTCGTTAGAGCAACTCTG 60.164 44.000 7.37 0.00 41.37 3.35
754 755 4.932200 CCATTTCTTCGTTAGAGCAACTCT 59.068 41.667 2.23 2.23 43.83 3.24
755 756 4.929808 TCCATTTCTTCGTTAGAGCAACTC 59.070 41.667 0.00 0.00 34.77 3.01
756 757 4.894784 TCCATTTCTTCGTTAGAGCAACT 58.105 39.130 0.00 0.00 34.77 3.16
757 758 5.803020 ATCCATTTCTTCGTTAGAGCAAC 57.197 39.130 0.00 0.00 33.51 4.17
758 759 7.915293 TTAATCCATTTCTTCGTTAGAGCAA 57.085 32.000 0.00 0.00 33.51 3.91
759 760 7.768582 TGATTAATCCATTTCTTCGTTAGAGCA 59.231 33.333 12.90 0.00 33.51 4.26
764 765 9.104965 ACGATTGATTAATCCATTTCTTCGTTA 57.895 29.630 12.90 0.00 39.63 3.18
765 766 7.910162 CACGATTGATTAATCCATTTCTTCGTT 59.090 33.333 12.90 0.00 39.63 3.85
766 767 7.409697 CACGATTGATTAATCCATTTCTTCGT 58.590 34.615 12.90 10.34 39.63 3.85
767 768 6.852853 CCACGATTGATTAATCCATTTCTTCG 59.147 38.462 12.90 9.77 39.63 3.79
768 769 7.930217 TCCACGATTGATTAATCCATTTCTTC 58.070 34.615 12.90 0.00 39.63 2.87
769 770 7.013655 CCTCCACGATTGATTAATCCATTTCTT 59.986 37.037 12.90 0.00 39.63 2.52
770 771 6.488006 CCTCCACGATTGATTAATCCATTTCT 59.512 38.462 12.90 0.00 39.63 2.52
978 6488 4.778143 CCCGGCCACCTTTCTCGG 62.778 72.222 2.24 0.00 40.32 4.63
1208 6916 3.000819 TACAGGCACACCCCTCCG 61.001 66.667 0.00 0.00 36.11 4.63
1429 7145 9.463902 ACATTTGTAGTCACTAGTACTCACTAT 57.536 33.333 0.00 0.00 36.66 2.12
1431 7147 7.594714 CACATTTGTAGTCACTAGTACTCACT 58.405 38.462 0.00 0.22 38.91 3.41
1439 7164 4.493057 CGCATGCACATTTGTAGTCACTAG 60.493 45.833 19.57 0.00 0.00 2.57
1442 7261 2.095768 ACGCATGCACATTTGTAGTCAC 60.096 45.455 19.57 0.00 0.00 3.67
1819 7672 4.029809 GCTTGGCCGTACCCCTGT 62.030 66.667 0.00 0.00 37.83 4.00
1859 7712 1.828660 CGTATGGAGGAGAGGCGGT 60.829 63.158 0.00 0.00 0.00 5.68
1864 7717 1.467678 CCTGGCCGTATGGAGGAGAG 61.468 65.000 4.73 0.00 37.49 3.20
1943 7802 2.561885 GAACTGCTGCTGCTGCTG 59.438 61.111 27.75 27.75 41.07 4.41
1944 7803 2.672307 GGAACTGCTGCTGCTGCT 60.672 61.111 27.67 11.62 41.07 4.24
1945 7804 3.745803 GGGAACTGCTGCTGCTGC 61.746 66.667 22.51 22.51 41.07 5.25
1946 7805 2.281970 TGGGAACTGCTGCTGCTG 60.282 61.111 18.66 18.66 42.70 4.41
1947 7806 2.033757 CTGGGAACTGCTGCTGCT 59.966 61.111 17.00 0.00 40.48 4.24
2008 7867 1.544703 GGGAGGAGGAGGAGGGTAG 59.455 68.421 0.00 0.00 0.00 3.18
2126 7988 2.170036 CGCGCGTTACACCTGTTG 59.830 61.111 24.19 0.00 0.00 3.33
2184 8137 6.384015 ACAAGAGATACAGATGTTACATGGGA 59.616 38.462 1.24 0.00 0.00 4.37
2197 8150 7.506114 AGAGGTAGAGAGTACAAGAGATACAG 58.494 42.308 0.00 0.00 0.00 2.74
2231 8184 5.643777 CAGAAGTAACACAAGAATACAGGGG 59.356 44.000 0.00 0.00 0.00 4.79
2253 8206 2.082231 CAAACTGTGCTGATCCTCCAG 58.918 52.381 0.00 0.00 37.23 3.86
2254 8207 1.421268 ACAAACTGTGCTGATCCTCCA 59.579 47.619 0.00 0.00 0.00 3.86
2255 8208 2.191128 ACAAACTGTGCTGATCCTCC 57.809 50.000 0.00 0.00 0.00 4.30
2267 8225 6.910433 ACAAACGTAGAGCAATAAACAAACTG 59.090 34.615 0.00 0.00 0.00 3.16
2270 8228 8.145316 ACTACAAACGTAGAGCAATAAACAAA 57.855 30.769 6.63 0.00 39.00 2.83
2354 8323 9.326413 AGCGACAATAAGCAAGTAATAATAAGT 57.674 29.630 0.00 0.00 35.48 2.24
2358 8327 9.931210 GTAAAGCGACAATAAGCAAGTAATAAT 57.069 29.630 0.00 0.00 35.48 1.28
2359 8328 9.158233 AGTAAAGCGACAATAAGCAAGTAATAA 57.842 29.630 0.00 0.00 35.48 1.40
2360 8329 8.712285 AGTAAAGCGACAATAAGCAAGTAATA 57.288 30.769 0.00 0.00 35.48 0.98
2361 8330 7.611213 AGTAAAGCGACAATAAGCAAGTAAT 57.389 32.000 0.00 0.00 35.48 1.89
2362 8331 8.030692 TCTAGTAAAGCGACAATAAGCAAGTAA 58.969 33.333 0.00 0.00 35.48 2.24
2363 8332 7.541162 TCTAGTAAAGCGACAATAAGCAAGTA 58.459 34.615 0.00 0.00 35.48 2.24
2364 8333 6.395629 TCTAGTAAAGCGACAATAAGCAAGT 58.604 36.000 0.00 0.00 35.48 3.16
2365 8334 6.887376 TCTAGTAAAGCGACAATAAGCAAG 57.113 37.500 0.00 0.00 35.48 4.01
2366 8335 8.978539 CATATCTAGTAAAGCGACAATAAGCAA 58.021 33.333 0.00 0.00 35.48 3.91
2367 8336 7.598869 CCATATCTAGTAAAGCGACAATAAGCA 59.401 37.037 0.00 0.00 35.48 3.91
2368 8337 7.813148 TCCATATCTAGTAAAGCGACAATAAGC 59.187 37.037 0.00 0.00 0.00 3.09
2369 8338 9.862371 ATCCATATCTAGTAAAGCGACAATAAG 57.138 33.333 0.00 0.00 0.00 1.73
2379 8348 6.188407 TCCCTCCGATCCATATCTAGTAAAG 58.812 44.000 0.00 0.00 0.00 1.85
2387 8356 3.494048 GCATGATCCCTCCGATCCATATC 60.494 52.174 0.00 0.00 46.06 1.63
2393 8362 1.671261 CGAAGCATGATCCCTCCGATC 60.671 57.143 0.00 0.00 46.70 3.69
2420 8400 3.304525 CGTCGGCTATAACTCGAAAGGAT 60.305 47.826 0.00 0.00 34.62 3.24
2433 8413 1.033746 TCGGGAAAGTCGTCGGCTAT 61.034 55.000 0.00 0.00 0.00 2.97
2449 8429 3.637432 GATAGTTGAGATGCAGAGTCGG 58.363 50.000 0.00 0.00 0.00 4.79
2489 8469 0.621082 TGGCATGAATCGGGTGGTTA 59.379 50.000 0.00 0.00 0.00 2.85
2506 8487 1.864711 ACATTTCGTTCAGTGTCGTGG 59.135 47.619 9.38 3.03 0.00 4.94
2561 10921 0.721483 GAAGGCACGAGCGAAAAACG 60.721 55.000 0.00 0.00 43.41 3.60
2572 10932 2.166459 TCAGACTAGAATGGAAGGCACG 59.834 50.000 0.00 0.00 0.00 5.34
2601 10961 3.127030 CGGTTGAGCTCCTAATTTTGACC 59.873 47.826 12.15 4.59 0.00 4.02
2609 11342 1.295423 GGTGCGGTTGAGCTCCTAA 59.705 57.895 12.15 0.00 44.71 2.69
2647 11380 9.658799 ATCCAAATATAACTTATCTGTCGGATG 57.341 33.333 4.27 0.00 35.98 3.51
2653 11387 9.646522 AGCCAAATCCAAATATAACTTATCTGT 57.353 29.630 0.00 0.00 0.00 3.41
2662 11396 8.995027 ATGTACTGAGCCAAATCCAAATATAA 57.005 30.769 0.00 0.00 0.00 0.98
2692 11434 7.546778 TGGTTATTTGAGTTTTCCTTTTTGC 57.453 32.000 0.00 0.00 0.00 3.68
2750 11492 4.141620 ACCACCTTCACTAGCAATATCAGG 60.142 45.833 0.00 0.00 0.00 3.86
2751 11493 5.028549 ACCACCTTCACTAGCAATATCAG 57.971 43.478 0.00 0.00 0.00 2.90
2759 11501 0.250513 CCCAGACCACCTTCACTAGC 59.749 60.000 0.00 0.00 0.00 3.42
2876 11618 9.609950 CAAAATTTGCCATAAAACAATTCGAAT 57.390 25.926 4.39 4.39 0.00 3.34
2877 11619 8.830580 TCAAAATTTGCCATAAAACAATTCGAA 58.169 25.926 0.00 0.00 0.00 3.71
2878 11620 8.279103 GTCAAAATTTGCCATAAAACAATTCGA 58.721 29.630 0.00 0.00 0.00 3.71
2879 11621 8.066595 TGTCAAAATTTGCCATAAAACAATTCG 58.933 29.630 0.00 0.00 0.00 3.34
2880 11622 9.727627 TTGTCAAAATTTGCCATAAAACAATTC 57.272 25.926 0.00 0.00 0.00 2.17
2884 11626 8.680903 ACATTTGTCAAAATTTGCCATAAAACA 58.319 25.926 1.31 0.00 33.59 2.83
2885 11627 9.513727 AACATTTGTCAAAATTTGCCATAAAAC 57.486 25.926 1.31 0.00 33.59 2.43
3000 11752 2.322355 AATGAGCTCGGGATGAACAG 57.678 50.000 9.64 0.00 0.00 3.16
3001 11753 2.027285 TCAAATGAGCTCGGGATGAACA 60.027 45.455 9.64 0.00 0.00 3.18
3037 11789 1.456165 GGAGTGAGAAAACTCGAACGC 59.544 52.381 0.00 0.00 46.31 4.84
3038 11790 2.981140 GAGGAGTGAGAAAACTCGAACG 59.019 50.000 0.00 0.00 46.31 3.95
3042 11798 5.379732 ACTAAGAGGAGTGAGAAAACTCG 57.620 43.478 0.00 0.00 46.31 4.18
3055 11811 3.952323 CCTCGTACCAATCACTAAGAGGA 59.048 47.826 2.26 0.00 44.87 3.71
3056 11812 3.952323 TCCTCGTACCAATCACTAAGAGG 59.048 47.826 2.03 2.03 43.80 3.69
3077 11833 9.691362 GAACATATGAGGTATTCTCTTTCTCTC 57.309 37.037 10.38 0.00 42.86 3.20
3083 11839 5.305644 AGGCGAACATATGAGGTATTCTCTT 59.694 40.000 10.38 0.00 42.86 2.85
3095 11851 1.224069 CCAGGCGAGGCGAACATATG 61.224 60.000 0.00 0.00 0.00 1.78
3096 11852 1.069765 CCAGGCGAGGCGAACATAT 59.930 57.895 0.00 0.00 0.00 1.78
3097 11853 2.499205 CCAGGCGAGGCGAACATA 59.501 61.111 0.00 0.00 0.00 2.29
3105 11861 4.154347 GAGACAGGCCAGGCGAGG 62.154 72.222 5.01 0.00 0.00 4.63
3117 11873 1.043116 ATTCGCCCATCTCCGAGACA 61.043 55.000 0.00 0.00 34.68 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.