Multiple sequence alignment - TraesCS1B01G280600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G280600 chr1B 100.000 4955 0 0 979 5933 488824438 488819484 0.000000e+00 9151.0
1 TraesCS1B01G280600 chr1B 100.000 689 0 0 1 689 488825416 488824728 0.000000e+00 1273.0
2 TraesCS1B01G280600 chr1A 96.089 2327 71 10 3617 5933 464251277 464248961 0.000000e+00 3775.0
3 TraesCS1B01G280600 chr1A 97.359 833 20 2 2667 3498 464252102 464251271 0.000000e+00 1415.0
4 TraesCS1B01G280600 chr1A 93.112 842 39 6 979 1805 464253836 464252999 0.000000e+00 1216.0
5 TraesCS1B01G280600 chr1A 93.613 501 31 1 1770 2269 464253079 464252579 0.000000e+00 747.0
6 TraesCS1B01G280600 chr1A 91.639 299 20 4 2346 2641 352130578 352130282 5.530000e-110 409.0
7 TraesCS1B01G280600 chr1A 88.473 347 16 6 2335 2679 464252571 464252247 1.200000e-106 398.0
8 TraesCS1B01G280600 chr1A 90.635 299 20 7 2346 2641 7306446 7306739 2.000000e-104 390.0
9 TraesCS1B01G280600 chr1A 94.118 136 7 1 3490 3624 486045904 486045769 7.790000e-49 206.0
10 TraesCS1B01G280600 chr1D 94.530 1627 80 6 3617 5236 365437782 365436158 0.000000e+00 2503.0
11 TraesCS1B01G280600 chr1D 96.883 1219 33 5 2279 3495 365438994 365437779 0.000000e+00 2036.0
12 TraesCS1B01G280600 chr1D 94.640 1306 58 8 979 2279 365440347 365439049 0.000000e+00 2013.0
13 TraesCS1B01G280600 chr1D 94.940 672 18 3 5275 5933 365436161 365435493 0.000000e+00 1038.0
14 TraesCS1B01G280600 chr1D 89.910 446 32 7 254 687 365440894 365440450 4.010000e-156 562.0
15 TraesCS1B01G280600 chr1D 84.564 149 18 4 2324 2470 57214487 57214632 6.200000e-30 143.0
16 TraesCS1B01G280600 chr5A 92.025 489 36 3 2491 2977 36553861 36553374 0.000000e+00 684.0
17 TraesCS1B01G280600 chr5A 97.917 48 1 0 2279 2326 582390181 582390228 3.810000e-12 84.2
18 TraesCS1B01G280600 chr7D 93.827 243 15 0 2717 2959 414290214 414289972 3.380000e-97 366.0
19 TraesCS1B01G280600 chr7D 86.817 311 41 0 1961 2271 1522597 1522287 1.220000e-91 348.0
20 TraesCS1B01G280600 chr7D 84.713 314 48 0 1955 2268 169474938 169475251 1.240000e-81 315.0
21 TraesCS1B01G280600 chr7D 85.235 149 17 4 2324 2470 169475253 169475398 1.330000e-31 148.0
22 TraesCS1B01G280600 chr7D 85.235 149 17 4 2324 2470 266877689 266877834 1.330000e-31 148.0
23 TraesCS1B01G280600 chr7D 92.453 53 3 1 2279 2331 249422556 249422607 2.290000e-09 75.0
24 TraesCS1B01G280600 chr6D 93.827 243 15 0 2717 2959 468640015 468640257 3.380000e-97 366.0
25 TraesCS1B01G280600 chr5D 93.827 243 15 0 2717 2959 267805712 267805954 3.380000e-97 366.0
26 TraesCS1B01G280600 chr5D 85.235 149 17 4 2324 2470 42561298 42561443 1.330000e-31 148.0
27 TraesCS1B01G280600 chr3D 93.827 243 15 0 2717 2959 502142322 502142080 3.380000e-97 366.0
28 TraesCS1B01G280600 chr2D 93.004 243 16 1 2717 2959 332504897 332504656 2.630000e-93 353.0
29 TraesCS1B01G280600 chr2D 93.007 143 9 1 3490 3632 628995454 628995595 2.170000e-49 207.0
30 TraesCS1B01G280600 chr2D 89.706 68 5 2 2262 2327 169042486 169042553 1.060000e-12 86.1
31 TraesCS1B01G280600 chr2D 95.745 47 2 0 2278 2324 416858316 416858270 6.380000e-10 76.8
32 TraesCS1B01G280600 chr2A 85.852 311 44 0 1961 2271 17786959 17786649 1.230000e-86 331.0
33 TraesCS1B01G280600 chr7A 85.577 312 43 2 1961 2271 20829322 20829012 5.730000e-85 326.0
34 TraesCS1B01G280600 chr7A 97.778 45 1 0 2279 2323 85209346 85209302 1.770000e-10 78.7
35 TraesCS1B01G280600 chr4B 84.906 318 44 3 1955 2271 395826770 395827084 9.590000e-83 318.0
36 TraesCS1B01G280600 chr4B 93.525 139 9 0 3485 3623 399945300 399945438 2.170000e-49 207.0
37 TraesCS1B01G280600 chr7B 83.810 315 47 3 1958 2271 51592138 51591827 4.500000e-76 296.0
38 TraesCS1B01G280600 chr7B 83.492 315 47 5 1958 2271 51618169 51617859 7.520000e-74 289.0
39 TraesCS1B01G280600 chr7B 92.053 151 10 2 3493 3643 55863195 55863047 1.680000e-50 211.0
40 TraesCS1B01G280600 chr3A 92.258 155 9 3 3476 3628 469077414 469077567 3.600000e-52 217.0
41 TraesCS1B01G280600 chr3A 95.918 49 1 1 2279 2326 621664488 621664440 1.770000e-10 78.7
42 TraesCS1B01G280600 chr2B 95.489 133 6 0 3488 3620 620596810 620596678 4.660000e-51 213.0
43 TraesCS1B01G280600 chr2B 92.908 141 8 2 3489 3627 416885889 416886029 2.800000e-48 204.0
44 TraesCS1B01G280600 chr5B 95.455 132 6 0 3491 3622 354511662 354511531 1.680000e-50 211.0
45 TraesCS1B01G280600 chr3B 91.333 150 11 2 3481 3630 217399659 217399806 2.800000e-48 204.0
46 TraesCS1B01G280600 chrUn 84.667 150 17 4 2324 2470 108981649 108981795 1.720000e-30 145.0
47 TraesCS1B01G280600 chr6B 97.826 46 1 0 2279 2324 530560418 530560463 4.930000e-11 80.5
48 TraesCS1B01G280600 chr4A 95.833 48 2 0 2279 2326 667788188 667788141 1.770000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G280600 chr1B 488819484 488825416 5932 True 5212.0 9151 100.0000 1 5933 2 chr1B.!!$R1 5932
1 TraesCS1B01G280600 chr1A 464248961 464253836 4875 True 1510.2 3775 93.7292 979 5933 5 chr1A.!!$R3 4954
2 TraesCS1B01G280600 chr1D 365435493 365440894 5401 True 1630.4 2503 94.1806 254 5933 5 chr1D.!!$R1 5679

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
233 234 0.036765 CGTGGGCCACTAAGCTTACA 60.037 55.000 32.28 0.00 31.34 2.41 F
234 235 1.406887 CGTGGGCCACTAAGCTTACAT 60.407 52.381 32.28 0.00 31.34 2.29 F
236 237 1.633432 TGGGCCACTAAGCTTACATGT 59.367 47.619 0.00 2.69 0.00 3.21 F
1018 1030 1.961180 AATGGCGTTCTCCTCCCTCG 61.961 60.000 0.00 0.00 0.00 4.63 F
1820 1896 0.034960 TTTTACCAGCCGGCATAGCA 60.035 50.000 31.54 6.35 34.57 3.49 F
1825 1901 0.461135 CCAGCCGGCATAGCAAAATT 59.539 50.000 31.54 0.00 0.00 1.82 F
2586 2718 0.734889 AGCGGCATCACTAAATGTGC 59.265 50.000 1.45 0.00 45.81 4.57 F
3507 3799 1.171308 TCAAGTACTCCCTCCGTTCG 58.829 55.000 0.00 0.00 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1801 1877 0.034960 TGCTATGCCGGCTGGTAAAA 60.035 50.0 29.70 5.17 37.67 1.52 R
1804 1880 0.034960 TTTTGCTATGCCGGCTGGTA 60.035 50.0 29.70 16.37 37.67 3.25 R
1806 1882 0.461135 AATTTTGCTATGCCGGCTGG 59.539 50.0 29.70 17.89 38.77 4.85 R
2308 2439 1.158434 GCTAGTACTCCCTCCGATCG 58.842 60.0 8.51 8.51 0.00 3.69 R
3597 3889 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.00 44.66 2.12 R
3598 3890 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.0 5.23 0.00 44.66 1.89 R
3599 3891 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.0 5.23 0.00 44.66 1.40 R
5356 5659 0.964700 TGGGATTTTCATGCGTTGCA 59.035 45.0 0.00 0.00 44.86 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.917329 TTCTCTCACGTTTCGTCTCAT 57.083 42.857 0.00 0.00 38.32 2.90
21 22 3.203161 TCTCTCACGTTTCGTCTCATG 57.797 47.619 0.00 0.00 38.32 3.07
22 23 2.552743 TCTCTCACGTTTCGTCTCATGT 59.447 45.455 0.00 0.00 38.32 3.21
23 24 2.658802 CTCTCACGTTTCGTCTCATGTG 59.341 50.000 0.00 0.00 38.32 3.21
24 25 2.034179 TCTCACGTTTCGTCTCATGTGT 59.966 45.455 0.00 0.00 38.32 3.72
25 26 2.794910 CTCACGTTTCGTCTCATGTGTT 59.205 45.455 0.00 0.00 38.32 3.32
26 27 2.792674 TCACGTTTCGTCTCATGTGTTC 59.207 45.455 0.00 0.00 38.32 3.18
27 28 2.096909 CACGTTTCGTCTCATGTGTTCC 60.097 50.000 0.00 0.00 38.32 3.62
28 29 2.223971 ACGTTTCGTCTCATGTGTTCCT 60.224 45.455 0.00 0.00 33.69 3.36
29 30 2.408704 CGTTTCGTCTCATGTGTTCCTC 59.591 50.000 0.00 0.00 0.00 3.71
30 31 3.390135 GTTTCGTCTCATGTGTTCCTCA 58.610 45.455 0.00 0.00 0.00 3.86
31 32 3.744238 TTCGTCTCATGTGTTCCTCAA 57.256 42.857 0.00 0.00 0.00 3.02
32 33 3.026630 TCGTCTCATGTGTTCCTCAAC 57.973 47.619 0.00 0.00 0.00 3.18
33 34 1.721389 CGTCTCATGTGTTCCTCAACG 59.279 52.381 0.00 0.00 34.95 4.10
34 35 2.607038 CGTCTCATGTGTTCCTCAACGA 60.607 50.000 0.00 0.00 34.95 3.85
35 36 3.390135 GTCTCATGTGTTCCTCAACGAA 58.610 45.455 0.00 0.00 34.95 3.85
36 37 3.430218 GTCTCATGTGTTCCTCAACGAAG 59.570 47.826 0.00 0.00 34.95 3.79
37 38 3.320826 TCTCATGTGTTCCTCAACGAAGA 59.679 43.478 0.00 0.00 34.95 2.87
38 39 4.058124 CTCATGTGTTCCTCAACGAAGAA 58.942 43.478 0.00 0.00 34.95 2.52
39 40 4.641396 TCATGTGTTCCTCAACGAAGAAT 58.359 39.130 0.00 0.00 34.95 2.40
40 41 5.789521 TCATGTGTTCCTCAACGAAGAATA 58.210 37.500 0.00 0.00 34.95 1.75
41 42 6.406370 TCATGTGTTCCTCAACGAAGAATAT 58.594 36.000 0.00 0.00 34.95 1.28
42 43 6.313658 TCATGTGTTCCTCAACGAAGAATATG 59.686 38.462 0.00 0.00 34.95 1.78
43 44 5.547465 TGTGTTCCTCAACGAAGAATATGT 58.453 37.500 0.00 0.00 34.95 2.29
44 45 6.693466 TGTGTTCCTCAACGAAGAATATGTA 58.307 36.000 0.00 0.00 34.95 2.29
45 46 6.588756 TGTGTTCCTCAACGAAGAATATGTAC 59.411 38.462 0.00 0.00 34.95 2.90
46 47 6.588756 GTGTTCCTCAACGAAGAATATGTACA 59.411 38.462 0.00 0.00 34.95 2.90
47 48 7.277981 GTGTTCCTCAACGAAGAATATGTACAT 59.722 37.037 13.93 13.93 34.95 2.29
48 49 7.822334 TGTTCCTCAACGAAGAATATGTACATT 59.178 33.333 14.77 0.00 34.95 2.71
49 50 8.665685 GTTCCTCAACGAAGAATATGTACATTT 58.334 33.333 14.77 2.88 0.00 2.32
50 51 8.420374 TCCTCAACGAAGAATATGTACATTTC 57.580 34.615 14.77 15.92 0.00 2.17
51 52 8.038351 TCCTCAACGAAGAATATGTACATTTCA 58.962 33.333 14.77 0.00 0.00 2.69
52 53 8.664798 CCTCAACGAAGAATATGTACATTTCAA 58.335 33.333 14.77 0.00 0.00 2.69
54 55 9.820229 TCAACGAAGAATATGTACATTTCAAAC 57.180 29.630 14.77 10.83 0.00 2.93
55 56 9.825972 CAACGAAGAATATGTACATTTCAAACT 57.174 29.630 14.77 3.21 0.00 2.66
56 57 9.825972 AACGAAGAATATGTACATTTCAAACTG 57.174 29.630 14.77 9.20 0.00 3.16
57 58 9.214957 ACGAAGAATATGTACATTTCAAACTGA 57.785 29.630 14.77 0.00 0.00 3.41
69 70 8.230472 ACATTTCAAACTGATTATGAGATCCC 57.770 34.615 0.00 0.00 0.00 3.85
70 71 7.286316 ACATTTCAAACTGATTATGAGATCCCC 59.714 37.037 0.00 0.00 0.00 4.81
71 72 5.974156 TCAAACTGATTATGAGATCCCCA 57.026 39.130 0.00 0.00 0.00 4.96
72 73 5.684704 TCAAACTGATTATGAGATCCCCAC 58.315 41.667 0.00 0.00 0.00 4.61
73 74 5.191522 TCAAACTGATTATGAGATCCCCACA 59.808 40.000 0.00 0.00 0.00 4.17
74 75 5.715439 AACTGATTATGAGATCCCCACAA 57.285 39.130 0.00 0.00 0.00 3.33
75 76 5.715439 ACTGATTATGAGATCCCCACAAA 57.285 39.130 0.00 0.00 0.00 2.83
76 77 6.078456 ACTGATTATGAGATCCCCACAAAA 57.922 37.500 0.00 0.00 0.00 2.44
77 78 6.493166 ACTGATTATGAGATCCCCACAAAAA 58.507 36.000 0.00 0.00 0.00 1.94
106 107 9.436957 AACTGATTATGAGATAACGAAACAACT 57.563 29.630 0.00 0.00 0.00 3.16
115 116 9.069078 TGAGATAACGAAACAACTAATTACTCG 57.931 33.333 0.00 0.00 0.00 4.18
116 117 8.403606 AGATAACGAAACAACTAATTACTCGG 57.596 34.615 0.00 0.00 0.00 4.63
117 118 8.031277 AGATAACGAAACAACTAATTACTCGGT 58.969 33.333 0.00 0.00 0.00 4.69
118 119 6.849588 AACGAAACAACTAATTACTCGGTT 57.150 33.333 0.00 0.00 0.00 4.44
119 120 6.849588 ACGAAACAACTAATTACTCGGTTT 57.150 33.333 0.00 0.00 0.00 3.27
120 121 6.881017 ACGAAACAACTAATTACTCGGTTTC 58.119 36.000 0.00 0.00 39.26 2.78
121 122 6.073602 ACGAAACAACTAATTACTCGGTTTCC 60.074 38.462 14.94 0.00 39.39 3.13
122 123 6.564709 AAACAACTAATTACTCGGTTTCCC 57.435 37.500 0.00 0.00 0.00 3.97
123 124 5.231702 ACAACTAATTACTCGGTTTCCCA 57.768 39.130 0.00 0.00 0.00 4.37
124 125 5.623169 ACAACTAATTACTCGGTTTCCCAA 58.377 37.500 0.00 0.00 0.00 4.12
125 126 6.063404 ACAACTAATTACTCGGTTTCCCAAA 58.937 36.000 0.00 0.00 0.00 3.28
126 127 6.546772 ACAACTAATTACTCGGTTTCCCAAAA 59.453 34.615 0.00 0.00 0.00 2.44
127 128 6.564709 ACTAATTACTCGGTTTCCCAAAAC 57.435 37.500 0.00 0.00 43.36 2.43
128 129 6.063404 ACTAATTACTCGGTTTCCCAAAACA 58.937 36.000 3.71 0.00 45.44 2.83
129 130 5.855740 AATTACTCGGTTTCCCAAAACAA 57.144 34.783 3.71 0.00 45.44 2.83
130 131 6.413783 AATTACTCGGTTTCCCAAAACAAT 57.586 33.333 3.71 0.00 45.44 2.71
131 132 5.855740 TTACTCGGTTTCCCAAAACAATT 57.144 34.783 3.71 0.00 45.44 2.32
132 133 4.746535 ACTCGGTTTCCCAAAACAATTT 57.253 36.364 3.71 0.00 45.44 1.82
133 134 5.855740 ACTCGGTTTCCCAAAACAATTTA 57.144 34.783 3.71 0.00 45.44 1.40
134 135 5.838529 ACTCGGTTTCCCAAAACAATTTAG 58.161 37.500 3.71 0.00 45.44 1.85
135 136 5.203060 TCGGTTTCCCAAAACAATTTAGG 57.797 39.130 3.71 0.00 45.44 2.69
136 137 4.650131 TCGGTTTCCCAAAACAATTTAGGT 59.350 37.500 3.71 0.00 45.44 3.08
137 138 5.128991 TCGGTTTCCCAAAACAATTTAGGTT 59.871 36.000 3.71 0.00 45.44 3.50
138 139 6.323225 TCGGTTTCCCAAAACAATTTAGGTTA 59.677 34.615 3.71 0.00 45.44 2.85
139 140 7.015389 TCGGTTTCCCAAAACAATTTAGGTTAT 59.985 33.333 3.71 0.00 45.44 1.89
140 141 8.305317 CGGTTTCCCAAAACAATTTAGGTTATA 58.695 33.333 3.71 0.00 45.44 0.98
141 142 9.426837 GGTTTCCCAAAACAATTTAGGTTATAC 57.573 33.333 3.71 0.00 45.44 1.47
142 143 9.984190 GTTTCCCAAAACAATTTAGGTTATACA 57.016 29.630 0.00 0.00 43.52 2.29
166 167 4.531659 AAAACCTCGATGCTAAATACGC 57.468 40.909 0.00 0.00 0.00 4.42
167 168 3.454371 AACCTCGATGCTAAATACGCT 57.546 42.857 0.00 0.00 0.00 5.07
168 169 3.454371 ACCTCGATGCTAAATACGCTT 57.546 42.857 0.00 0.00 0.00 4.68
169 170 4.579454 ACCTCGATGCTAAATACGCTTA 57.421 40.909 0.00 0.00 0.00 3.09
170 171 4.296690 ACCTCGATGCTAAATACGCTTAC 58.703 43.478 0.00 0.00 0.00 2.34
171 172 4.202080 ACCTCGATGCTAAATACGCTTACA 60.202 41.667 0.00 0.00 0.00 2.41
172 173 4.743151 CCTCGATGCTAAATACGCTTACAA 59.257 41.667 0.00 0.00 0.00 2.41
173 174 5.233476 CCTCGATGCTAAATACGCTTACAAA 59.767 40.000 0.00 0.00 0.00 2.83
174 175 6.268797 TCGATGCTAAATACGCTTACAAAG 57.731 37.500 0.00 0.00 0.00 2.77
175 176 6.037726 TCGATGCTAAATACGCTTACAAAGA 58.962 36.000 0.00 0.00 0.00 2.52
176 177 6.700081 TCGATGCTAAATACGCTTACAAAGAT 59.300 34.615 0.00 0.00 0.00 2.40
177 178 7.004225 CGATGCTAAATACGCTTACAAAGATC 58.996 38.462 0.00 0.00 0.00 2.75
178 179 6.268797 TGCTAAATACGCTTACAAAGATCG 57.731 37.500 0.00 0.00 0.00 3.69
179 180 5.808540 TGCTAAATACGCTTACAAAGATCGT 59.191 36.000 0.00 0.00 37.19 3.73
180 181 6.120812 GCTAAATACGCTTACAAAGATCGTG 58.879 40.000 0.00 0.00 34.97 4.35
181 182 6.020121 GCTAAATACGCTTACAAAGATCGTGA 60.020 38.462 6.46 0.00 34.97 4.35
182 183 6.715344 AAATACGCTTACAAAGATCGTGAA 57.285 33.333 6.46 0.00 34.97 3.18
183 184 6.715344 AATACGCTTACAAAGATCGTGAAA 57.285 33.333 6.46 0.00 34.97 2.69
184 185 6.903883 ATACGCTTACAAAGATCGTGAAAT 57.096 33.333 6.46 0.00 34.97 2.17
185 186 4.957971 ACGCTTACAAAGATCGTGAAATG 58.042 39.130 6.46 0.00 31.74 2.32
186 187 4.451096 ACGCTTACAAAGATCGTGAAATGT 59.549 37.500 6.46 0.00 31.74 2.71
187 188 5.636121 ACGCTTACAAAGATCGTGAAATGTA 59.364 36.000 6.46 0.00 31.74 2.29
188 189 6.312918 ACGCTTACAAAGATCGTGAAATGTAT 59.687 34.615 6.46 0.00 31.74 2.29
189 190 6.841286 CGCTTACAAAGATCGTGAAATGTATC 59.159 38.462 6.46 0.00 0.00 2.24
190 191 7.464045 CGCTTACAAAGATCGTGAAATGTATCA 60.464 37.037 6.46 0.00 0.00 2.15
191 192 8.338259 GCTTACAAAGATCGTGAAATGTATCAT 58.662 33.333 6.46 0.00 0.00 2.45
192 193 9.642312 CTTACAAAGATCGTGAAATGTATCATG 57.358 33.333 6.46 0.00 37.62 3.07
193 194 7.848223 ACAAAGATCGTGAAATGTATCATGA 57.152 32.000 0.00 0.00 46.34 3.07
194 195 8.267620 ACAAAGATCGTGAAATGTATCATGAA 57.732 30.769 0.00 0.00 45.66 2.57
195 196 8.393366 ACAAAGATCGTGAAATGTATCATGAAG 58.607 33.333 0.00 0.00 45.66 3.02
196 197 7.488187 AAGATCGTGAAATGTATCATGAAGG 57.512 36.000 0.00 0.00 45.66 3.46
197 198 6.820335 AGATCGTGAAATGTATCATGAAGGA 58.180 36.000 0.00 0.00 45.66 3.36
198 199 6.927936 AGATCGTGAAATGTATCATGAAGGAG 59.072 38.462 0.00 0.00 45.66 3.69
199 200 6.220726 TCGTGAAATGTATCATGAAGGAGA 57.779 37.500 0.00 0.00 41.22 3.71
200 201 6.820335 TCGTGAAATGTATCATGAAGGAGAT 58.180 36.000 0.00 0.00 41.22 2.75
201 202 6.925718 TCGTGAAATGTATCATGAAGGAGATC 59.074 38.462 0.00 0.00 41.22 2.75
202 203 6.927936 CGTGAAATGTATCATGAAGGAGATCT 59.072 38.462 0.00 0.00 38.37 2.75
203 204 7.440556 CGTGAAATGTATCATGAAGGAGATCTT 59.559 37.037 0.00 0.00 38.37 2.40
204 205 9.770097 GTGAAATGTATCATGAAGGAGATCTTA 57.230 33.333 0.00 0.00 35.50 2.10
205 206 9.770097 TGAAATGTATCATGAAGGAGATCTTAC 57.230 33.333 0.00 0.00 35.50 2.34
206 207 8.824159 AAATGTATCATGAAGGAGATCTTACG 57.176 34.615 0.00 0.00 35.50 3.18
207 208 7.767250 ATGTATCATGAAGGAGATCTTACGA 57.233 36.000 0.00 0.00 35.50 3.43
208 209 6.971602 TGTATCATGAAGGAGATCTTACGAC 58.028 40.000 0.00 0.00 35.50 4.34
209 210 6.773200 TGTATCATGAAGGAGATCTTACGACT 59.227 38.462 0.00 0.00 35.50 4.18
210 211 7.937394 TGTATCATGAAGGAGATCTTACGACTA 59.063 37.037 0.00 0.00 35.50 2.59
211 212 6.621316 TCATGAAGGAGATCTTACGACTAC 57.379 41.667 0.00 0.00 35.50 2.73
212 213 6.120220 TCATGAAGGAGATCTTACGACTACA 58.880 40.000 0.00 0.00 35.50 2.74
213 214 5.814764 TGAAGGAGATCTTACGACTACAC 57.185 43.478 0.00 0.00 35.50 2.90
214 215 4.639310 TGAAGGAGATCTTACGACTACACC 59.361 45.833 0.00 0.00 35.50 4.16
215 216 3.204526 AGGAGATCTTACGACTACACCG 58.795 50.000 0.00 0.00 0.00 4.94
216 217 2.941720 GGAGATCTTACGACTACACCGT 59.058 50.000 0.00 0.00 43.26 4.83
217 218 3.242673 GGAGATCTTACGACTACACCGTG 60.243 52.174 0.00 0.00 40.76 4.94
218 219 2.681848 AGATCTTACGACTACACCGTGG 59.318 50.000 3.03 0.00 40.76 4.94
219 220 1.167851 TCTTACGACTACACCGTGGG 58.832 55.000 3.03 0.00 40.76 4.61
220 221 0.457337 CTTACGACTACACCGTGGGC 60.457 60.000 3.03 0.00 40.76 5.36
221 222 1.876497 TTACGACTACACCGTGGGCC 61.876 60.000 3.03 0.00 40.76 5.80
222 223 3.687102 CGACTACACCGTGGGCCA 61.687 66.667 0.00 0.00 0.00 5.36
223 224 2.047560 GACTACACCGTGGGCCAC 60.048 66.667 26.95 26.95 0.00 5.01
224 225 2.525877 ACTACACCGTGGGCCACT 60.526 61.111 32.28 17.50 31.34 4.00
225 226 1.228956 ACTACACCGTGGGCCACTA 60.229 57.895 32.28 17.68 31.34 2.74
226 227 0.832983 ACTACACCGTGGGCCACTAA 60.833 55.000 32.28 13.01 31.34 2.24
227 228 0.108329 CTACACCGTGGGCCACTAAG 60.108 60.000 32.28 22.69 31.34 2.18
228 229 2.175035 TACACCGTGGGCCACTAAGC 62.175 60.000 32.28 8.11 31.34 3.09
229 230 2.928396 ACCGTGGGCCACTAAGCT 60.928 61.111 32.28 8.66 31.34 3.74
230 231 2.351276 CCGTGGGCCACTAAGCTT 59.649 61.111 32.28 3.48 31.34 3.74
231 232 1.196104 ACCGTGGGCCACTAAGCTTA 61.196 55.000 32.28 5.94 31.34 3.09
232 233 0.743345 CCGTGGGCCACTAAGCTTAC 60.743 60.000 32.28 4.97 31.34 2.34
233 234 0.036765 CGTGGGCCACTAAGCTTACA 60.037 55.000 32.28 0.00 31.34 2.41
234 235 1.406887 CGTGGGCCACTAAGCTTACAT 60.407 52.381 32.28 0.00 31.34 2.29
235 236 2.017049 GTGGGCCACTAAGCTTACATG 58.983 52.381 29.22 4.14 0.00 3.21
236 237 1.633432 TGGGCCACTAAGCTTACATGT 59.367 47.619 0.00 2.69 0.00 3.21
237 238 2.289565 GGGCCACTAAGCTTACATGTC 58.710 52.381 4.39 0.00 0.00 3.06
238 239 2.092914 GGGCCACTAAGCTTACATGTCT 60.093 50.000 4.39 0.00 0.00 3.41
239 240 2.939103 GGCCACTAAGCTTACATGTCTG 59.061 50.000 0.00 0.00 0.00 3.51
240 241 3.600388 GCCACTAAGCTTACATGTCTGT 58.400 45.455 0.00 0.00 39.49 3.41
241 242 3.619038 GCCACTAAGCTTACATGTCTGTC 59.381 47.826 0.00 0.00 36.79 3.51
242 243 4.820897 CCACTAAGCTTACATGTCTGTCA 58.179 43.478 0.00 0.00 36.79 3.58
243 244 5.423015 CCACTAAGCTTACATGTCTGTCAT 58.577 41.667 0.00 0.00 36.79 3.06
244 245 5.877012 CCACTAAGCTTACATGTCTGTCATT 59.123 40.000 0.00 0.00 36.79 2.57
245 246 7.041721 CCACTAAGCTTACATGTCTGTCATTA 58.958 38.462 0.00 0.00 36.79 1.90
246 247 7.549134 CCACTAAGCTTACATGTCTGTCATTAA 59.451 37.037 0.00 0.00 36.79 1.40
247 248 9.102757 CACTAAGCTTACATGTCTGTCATTAAT 57.897 33.333 0.00 0.00 36.79 1.40
248 249 9.319143 ACTAAGCTTACATGTCTGTCATTAATC 57.681 33.333 0.00 0.00 36.79 1.75
249 250 9.539825 CTAAGCTTACATGTCTGTCATTAATCT 57.460 33.333 0.00 0.00 36.79 2.40
251 252 9.539825 AAGCTTACATGTCTGTCATTAATCTAG 57.460 33.333 0.00 0.00 36.79 2.43
252 253 8.700051 AGCTTACATGTCTGTCATTAATCTAGT 58.300 33.333 0.00 0.00 36.79 2.57
253 254 8.973378 GCTTACATGTCTGTCATTAATCTAGTC 58.027 37.037 0.00 0.00 36.79 2.59
256 257 8.298729 ACATGTCTGTCATTAATCTAGTCTGA 57.701 34.615 0.00 0.00 34.09 3.27
257 258 8.753133 ACATGTCTGTCATTAATCTAGTCTGAA 58.247 33.333 0.00 0.00 34.09 3.02
258 259 9.761504 CATGTCTGTCATTAATCTAGTCTGAAT 57.238 33.333 0.00 0.00 34.09 2.57
298 299 9.185680 GGTACATATGAACCCATTTTTAGAACT 57.814 33.333 10.38 0.00 34.31 3.01
304 305 7.519032 TGAACCCATTTTTAGAACTTAGTGG 57.481 36.000 0.00 0.00 0.00 4.00
309 310 8.983789 ACCCATTTTTAGAACTTAGTGGAAAAA 58.016 29.630 11.67 11.67 32.24 1.94
349 353 4.955925 TGCAAATAGTTCGTGTATTGGG 57.044 40.909 0.00 0.00 0.00 4.12
369 373 3.528532 GGTAGAAACTCACCCATTACGG 58.471 50.000 0.00 0.00 0.00 4.02
445 449 8.408043 TTCCACATTTTCTCATCTTTACACAT 57.592 30.769 0.00 0.00 0.00 3.21
450 454 8.849168 ACATTTTCTCATCTTTACACATGTCAA 58.151 29.630 0.00 0.00 0.00 3.18
564 573 8.770828 TGTACGATTTCTTTCCTAAGTTTTGAG 58.229 33.333 0.00 0.00 32.98 3.02
610 619 5.336102 ACATTCCCAAAGTGAATTCATCCT 58.664 37.500 12.12 1.79 30.16 3.24
611 620 5.186409 ACATTCCCAAAGTGAATTCATCCTG 59.814 40.000 12.12 8.74 30.16 3.86
687 699 2.913578 CAGCCAACCCAAGCAGCA 60.914 61.111 0.00 0.00 0.00 4.41
688 700 2.599578 AGCCAACCCAAGCAGCAG 60.600 61.111 0.00 0.00 0.00 4.24
1018 1030 1.961180 AATGGCGTTCTCCTCCCTCG 61.961 60.000 0.00 0.00 0.00 4.63
1186 1198 4.180817 GGGGGTAAAGATTTGATTTTGCG 58.819 43.478 0.00 0.00 0.00 4.85
1572 1599 8.230486 GTCAAATTACCAGTCAGATTAACTGTG 58.770 37.037 2.92 0.00 45.86 3.66
1584 1611 4.997395 AGATTAACTGTGTTGAGCGACAAT 59.003 37.500 3.08 0.00 40.76 2.71
1585 1612 5.470098 AGATTAACTGTGTTGAGCGACAATT 59.530 36.000 3.08 0.00 40.76 2.32
1586 1613 5.493133 TTAACTGTGTTGAGCGACAATTT 57.507 34.783 3.08 0.00 40.76 1.82
1587 1614 4.370364 AACTGTGTTGAGCGACAATTTT 57.630 36.364 3.08 0.00 40.76 1.82
1588 1615 4.370364 ACTGTGTTGAGCGACAATTTTT 57.630 36.364 3.08 0.00 40.76 1.94
1628 1655 7.839907 TCAAATTCCCCTTTGTATCATTGAAG 58.160 34.615 0.00 0.00 37.39 3.02
1699 1726 7.880713 TGCTGTTGTTGTACTATCATTTTCCTA 59.119 33.333 0.00 0.00 0.00 2.94
1785 1861 4.412207 CAGCCGGAGTAGCAAAATTTAAC 58.588 43.478 5.05 0.00 0.00 2.01
1786 1862 3.126343 AGCCGGAGTAGCAAAATTTAACG 59.874 43.478 5.05 0.00 0.00 3.18
1787 1863 3.422655 CCGGAGTAGCAAAATTTAACGC 58.577 45.455 0.00 0.00 0.00 4.84
1788 1864 3.120130 CCGGAGTAGCAAAATTTAACGCA 60.120 43.478 0.00 0.00 0.00 5.24
1789 1865 4.438200 CCGGAGTAGCAAAATTTAACGCAT 60.438 41.667 0.00 0.00 0.00 4.73
1790 1866 5.092781 CGGAGTAGCAAAATTTAACGCATT 58.907 37.500 9.14 0.00 0.00 3.56
1791 1867 6.252281 CGGAGTAGCAAAATTTAACGCATTA 58.748 36.000 9.14 0.00 0.00 1.90
1792 1868 6.910433 CGGAGTAGCAAAATTTAACGCATTAT 59.090 34.615 9.14 0.00 0.00 1.28
1793 1869 7.097047 CGGAGTAGCAAAATTTAACGCATTATG 60.097 37.037 9.14 0.00 0.00 1.90
1794 1870 7.913297 GGAGTAGCAAAATTTAACGCATTATGA 59.087 33.333 0.00 0.00 0.00 2.15
1795 1871 9.284594 GAGTAGCAAAATTTAACGCATTATGAA 57.715 29.630 0.00 0.00 0.00 2.57
1796 1872 9.801873 AGTAGCAAAATTTAACGCATTATGAAT 57.198 25.926 0.00 0.00 0.00 2.57
1798 1874 8.130307 AGCAAAATTTAACGCATTATGAATCC 57.870 30.769 0.00 0.00 0.00 3.01
1799 1875 7.763528 AGCAAAATTTAACGCATTATGAATCCA 59.236 29.630 0.00 0.00 0.00 3.41
1800 1876 8.057742 GCAAAATTTAACGCATTATGAATCCAG 58.942 33.333 0.00 0.00 0.00 3.86
1801 1877 9.086336 CAAAATTTAACGCATTATGAATCCAGT 57.914 29.630 0.00 0.00 0.00 4.00
1802 1878 9.651913 AAAATTTAACGCATTATGAATCCAGTT 57.348 25.926 0.00 0.00 0.00 3.16
1803 1879 9.651913 AAATTTAACGCATTATGAATCCAGTTT 57.348 25.926 0.00 0.00 0.00 2.66
1804 1880 9.651913 AATTTAACGCATTATGAATCCAGTTTT 57.348 25.926 0.00 0.00 0.00 2.43
1806 1882 9.562583 TTTAACGCATTATGAATCCAGTTTTAC 57.437 29.630 0.00 0.00 0.00 2.01
1807 1883 6.131544 ACGCATTATGAATCCAGTTTTACC 57.868 37.500 0.00 0.00 0.00 2.85
1808 1884 5.650266 ACGCATTATGAATCCAGTTTTACCA 59.350 36.000 0.00 0.00 0.00 3.25
1809 1885 6.183360 ACGCATTATGAATCCAGTTTTACCAG 60.183 38.462 0.00 0.00 0.00 4.00
1810 1886 5.979517 GCATTATGAATCCAGTTTTACCAGC 59.020 40.000 0.00 0.00 0.00 4.85
1811 1887 6.507023 CATTATGAATCCAGTTTTACCAGCC 58.493 40.000 0.00 0.00 0.00 4.85
1812 1888 2.432444 TGAATCCAGTTTTACCAGCCG 58.568 47.619 0.00 0.00 0.00 5.52
1813 1889 1.743394 GAATCCAGTTTTACCAGCCGG 59.257 52.381 0.00 0.00 38.77 6.13
1814 1890 0.679960 ATCCAGTTTTACCAGCCGGC 60.680 55.000 21.89 21.89 34.57 6.13
1815 1891 1.602323 CCAGTTTTACCAGCCGGCA 60.602 57.895 31.54 4.11 34.57 5.69
1816 1892 0.965363 CCAGTTTTACCAGCCGGCAT 60.965 55.000 31.54 16.44 34.57 4.40
1817 1893 1.680555 CCAGTTTTACCAGCCGGCATA 60.681 52.381 31.54 15.27 34.57 3.14
1818 1894 1.670811 CAGTTTTACCAGCCGGCATAG 59.329 52.381 31.54 19.03 34.57 2.23
1819 1895 0.380733 GTTTTACCAGCCGGCATAGC 59.619 55.000 31.54 6.15 34.57 2.97
1820 1896 0.034960 TTTTACCAGCCGGCATAGCA 60.035 50.000 31.54 6.35 34.57 3.49
1821 1897 0.034960 TTTACCAGCCGGCATAGCAA 60.035 50.000 31.54 12.86 34.57 3.91
1822 1898 0.034960 TTACCAGCCGGCATAGCAAA 60.035 50.000 31.54 11.97 34.57 3.68
1823 1899 0.034960 TACCAGCCGGCATAGCAAAA 60.035 50.000 31.54 1.88 34.57 2.44
1824 1900 0.684153 ACCAGCCGGCATAGCAAAAT 60.684 50.000 31.54 0.00 34.57 1.82
1825 1901 0.461135 CCAGCCGGCATAGCAAAATT 59.539 50.000 31.54 0.00 0.00 1.82
1826 1902 1.134729 CCAGCCGGCATAGCAAAATTT 60.135 47.619 31.54 0.00 0.00 1.82
1827 1903 2.100584 CCAGCCGGCATAGCAAAATTTA 59.899 45.455 31.54 0.00 0.00 1.40
1828 1904 3.430098 CCAGCCGGCATAGCAAAATTTAA 60.430 43.478 31.54 0.00 0.00 1.52
1834 1910 5.107375 CCGGCATAGCAAAATTTAATGCATC 60.107 40.000 20.23 9.77 44.95 3.91
1844 1920 7.254658 GCAAAATTTAATGCATCCTGAATCCAG 60.255 37.037 9.48 0.00 42.12 3.86
1904 1980 9.294030 GAGTAGTAAAATTGGATTCAGCATTTG 57.706 33.333 0.00 0.00 0.00 2.32
1956 2032 1.771255 GCAATCAGGGATGGGTCTACT 59.229 52.381 0.00 0.00 0.00 2.57
2062 2138 6.834959 TCTCGTTTGCAGAATATTCAGATC 57.165 37.500 17.56 4.21 0.00 2.75
2228 2304 5.817816 CCTGGTGATGAGGTAAAGTTATCAC 59.182 44.000 0.00 0.00 44.13 3.06
2300 2431 3.724374 AGTTGTACTAAAGCAGCGACAA 58.276 40.909 0.00 0.00 33.29 3.18
2308 2439 8.761497 TGTACTAAAGCAGCGACAATTAATATC 58.239 33.333 0.00 0.00 0.00 1.63
2507 2639 5.190677 TGTTCGTGTGATCCTATCTCTACA 58.809 41.667 0.00 0.00 0.00 2.74
2586 2718 0.734889 AGCGGCATCACTAAATGTGC 59.265 50.000 1.45 0.00 45.81 4.57
2642 2775 2.375146 AGTTTGTCGCTTCCTTTTGGT 58.625 42.857 0.00 0.00 41.38 3.67
2653 2786 5.449177 CGCTTCCTTTTGGTTCCTTGATATC 60.449 44.000 0.00 0.00 41.38 1.63
2687 2977 6.019779 TGTAATAATTTTGGGCTGTGTGTC 57.980 37.500 0.00 0.00 0.00 3.67
2781 3073 2.554344 CCCTGCAGGTTACAAGCCTAAA 60.554 50.000 30.63 0.00 34.45 1.85
3127 3419 1.198713 ACAGGCTCTGTGTATCCCAG 58.801 55.000 7.00 0.00 43.63 4.45
3273 3565 4.225984 GTTGATGCATCGTGCTTTTAACA 58.774 39.130 21.34 0.00 45.31 2.41
3498 3790 9.877178 CCCACATATTATTAGATCAAGTACTCC 57.123 37.037 0.00 0.00 0.00 3.85
3499 3791 9.877178 CCACATATTATTAGATCAAGTACTCCC 57.123 37.037 0.00 0.00 0.00 4.30
3503 3795 6.896021 TTATTAGATCAAGTACTCCCTCCG 57.104 41.667 0.00 0.00 0.00 4.63
3504 3796 2.830651 AGATCAAGTACTCCCTCCGT 57.169 50.000 0.00 0.00 0.00 4.69
3505 3797 3.103080 AGATCAAGTACTCCCTCCGTT 57.897 47.619 0.00 0.00 0.00 4.44
3506 3798 3.025262 AGATCAAGTACTCCCTCCGTTC 58.975 50.000 0.00 0.00 0.00 3.95
3507 3799 1.171308 TCAAGTACTCCCTCCGTTCG 58.829 55.000 0.00 0.00 0.00 3.95
3508 3800 1.171308 CAAGTACTCCCTCCGTTCGA 58.829 55.000 0.00 0.00 0.00 3.71
3509 3801 1.542915 CAAGTACTCCCTCCGTTCGAA 59.457 52.381 0.00 0.00 0.00 3.71
3510 3802 1.915141 AGTACTCCCTCCGTTCGAAA 58.085 50.000 0.00 0.00 0.00 3.46
3511 3803 2.242043 AGTACTCCCTCCGTTCGAAAA 58.758 47.619 0.00 0.00 0.00 2.29
3512 3804 2.830321 AGTACTCCCTCCGTTCGAAAAT 59.170 45.455 0.00 0.00 0.00 1.82
3513 3805 4.019174 AGTACTCCCTCCGTTCGAAAATA 58.981 43.478 0.00 0.00 0.00 1.40
3514 3806 3.242549 ACTCCCTCCGTTCGAAAATAC 57.757 47.619 0.00 0.00 0.00 1.89
3515 3807 2.830321 ACTCCCTCCGTTCGAAAATACT 59.170 45.455 0.00 0.00 0.00 2.12
3516 3808 3.260128 ACTCCCTCCGTTCGAAAATACTT 59.740 43.478 0.00 0.00 0.00 2.24
3517 3809 3.592059 TCCCTCCGTTCGAAAATACTTG 58.408 45.455 0.00 0.00 0.00 3.16
3518 3810 3.007182 TCCCTCCGTTCGAAAATACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
3519 3811 3.370061 CCCTCCGTTCGAAAATACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
3520 3812 3.991773 CCTCCGTTCGAAAATACTTGTCA 59.008 43.478 0.00 0.00 0.00 3.58
3521 3813 4.630069 CCTCCGTTCGAAAATACTTGTCAT 59.370 41.667 0.00 0.00 0.00 3.06
3522 3814 5.220416 CCTCCGTTCGAAAATACTTGTCATC 60.220 44.000 0.00 0.00 0.00 2.92
3523 3815 5.231702 TCCGTTCGAAAATACTTGTCATCA 58.768 37.500 0.00 0.00 0.00 3.07
3524 3816 5.697178 TCCGTTCGAAAATACTTGTCATCAA 59.303 36.000 0.00 0.00 0.00 2.57
3525 3817 6.203145 TCCGTTCGAAAATACTTGTCATCAAA 59.797 34.615 0.00 0.00 32.87 2.69
3526 3818 6.853872 CCGTTCGAAAATACTTGTCATCAAAA 59.146 34.615 0.00 0.00 32.87 2.44
3527 3819 7.537306 CCGTTCGAAAATACTTGTCATCAAAAT 59.463 33.333 0.00 0.00 32.87 1.82
3528 3820 8.357966 CGTTCGAAAATACTTGTCATCAAAATG 58.642 33.333 0.00 0.00 32.87 2.32
3529 3821 8.638565 GTTCGAAAATACTTGTCATCAAAATGG 58.361 33.333 0.00 0.00 33.42 3.16
3530 3822 8.105097 TCGAAAATACTTGTCATCAAAATGGA 57.895 30.769 0.00 0.00 33.42 3.41
3531 3823 8.739039 TCGAAAATACTTGTCATCAAAATGGAT 58.261 29.630 0.00 0.00 33.42 3.41
3539 3831 8.096414 ACTTGTCATCAAAATGGATAAAAAGGG 58.904 33.333 0.00 0.00 33.42 3.95
3540 3832 6.405538 TGTCATCAAAATGGATAAAAAGGGC 58.594 36.000 0.00 0.00 33.42 5.19
3541 3833 6.213195 TGTCATCAAAATGGATAAAAAGGGCT 59.787 34.615 0.00 0.00 33.42 5.19
3542 3834 6.536224 GTCATCAAAATGGATAAAAAGGGCTG 59.464 38.462 0.00 0.00 33.42 4.85
3543 3835 6.213195 TCATCAAAATGGATAAAAAGGGCTGT 59.787 34.615 0.00 0.00 33.42 4.40
3544 3836 7.398618 TCATCAAAATGGATAAAAAGGGCTGTA 59.601 33.333 0.00 0.00 33.42 2.74
3545 3837 7.732222 TCAAAATGGATAAAAAGGGCTGTAT 57.268 32.000 0.00 0.00 0.00 2.29
3546 3838 7.781056 TCAAAATGGATAAAAAGGGCTGTATC 58.219 34.615 0.00 0.00 0.00 2.24
3547 3839 7.619302 TCAAAATGGATAAAAAGGGCTGTATCT 59.381 33.333 0.00 0.00 0.00 1.98
3548 3840 8.912988 CAAAATGGATAAAAAGGGCTGTATCTA 58.087 33.333 0.00 0.00 0.00 1.98
3549 3841 9.660544 AAAATGGATAAAAAGGGCTGTATCTAT 57.339 29.630 0.00 0.00 0.00 1.98
3552 3844 9.740710 ATGGATAAAAAGGGCTGTATCTATAAC 57.259 33.333 0.00 0.00 0.00 1.89
3553 3845 8.945193 TGGATAAAAAGGGCTGTATCTATAACT 58.055 33.333 0.00 0.00 0.00 2.24
3561 3853 9.924650 AAGGGCTGTATCTATAACTAAAATACG 57.075 33.333 0.00 0.00 0.00 3.06
3562 3854 9.086758 AGGGCTGTATCTATAACTAAAATACGT 57.913 33.333 0.00 0.00 0.00 3.57
3563 3855 9.351570 GGGCTGTATCTATAACTAAAATACGTC 57.648 37.037 0.00 0.00 0.00 4.34
3576 3868 8.120140 ACTAAAATACGTCTAGATACATCCCC 57.880 38.462 0.00 0.00 0.00 4.81
3577 3869 7.949006 ACTAAAATACGTCTAGATACATCCCCT 59.051 37.037 0.00 0.00 0.00 4.79
3578 3870 7.613551 AAAATACGTCTAGATACATCCCCTT 57.386 36.000 0.00 0.00 0.00 3.95
3579 3871 7.613551 AAATACGTCTAGATACATCCCCTTT 57.386 36.000 0.00 0.00 0.00 3.11
3580 3872 7.613551 AATACGTCTAGATACATCCCCTTTT 57.386 36.000 0.00 0.00 0.00 2.27
3581 3873 8.716674 AATACGTCTAGATACATCCCCTTTTA 57.283 34.615 0.00 0.00 0.00 1.52
3582 3874 8.896722 ATACGTCTAGATACATCCCCTTTTAT 57.103 34.615 0.00 0.00 0.00 1.40
3583 3875 7.613551 ACGTCTAGATACATCCCCTTTTATT 57.386 36.000 0.00 0.00 0.00 1.40
3584 3876 7.668492 ACGTCTAGATACATCCCCTTTTATTC 58.332 38.462 0.00 0.00 0.00 1.75
3585 3877 7.289317 ACGTCTAGATACATCCCCTTTTATTCA 59.711 37.037 0.00 0.00 0.00 2.57
3586 3878 8.148351 CGTCTAGATACATCCCCTTTTATTCAA 58.852 37.037 0.00 0.00 0.00 2.69
3591 3883 9.713684 AGATACATCCCCTTTTATTCAATTTGA 57.286 29.630 0.00 0.00 0.00 2.69
3594 3886 8.378115 ACATCCCCTTTTATTCAATTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
3595 3887 8.260114 ACATCCCCTTTTATTCAATTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
3596 3888 7.789202 TCCCCTTTTATTCAATTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
3597 3889 8.200024 TCCCCTTTTATTCAATTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
3598 3890 8.313292 TCCCCTTTTATTCAATTTGATGACAAG 58.687 33.333 0.00 1.87 37.32 3.16
3599 3891 8.096414 CCCCTTTTATTCAATTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
3606 3898 8.915871 ATTCAATTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
3607 3899 6.851609 TCAATTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
3608 3900 6.657117 TCAATTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
3609 3901 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
3610 3902 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
3611 3903 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3612 3904 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3613 3905 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3614 3906 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3615 3907 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3635 3927 4.137543 GGGAGTATTAGTCAATGCTTGGG 58.862 47.826 1.13 0.00 37.24 4.12
3903 4195 1.710809 AGCCAGGTGGGTATTTGTCTT 59.289 47.619 0.00 0.00 45.38 3.01
4089 4386 1.005394 ACTGTACCCGAAAGTGCCG 60.005 57.895 0.00 0.00 0.00 5.69
4093 4390 1.004595 GTACCCGAAAGTGCCGAATC 58.995 55.000 0.00 0.00 0.00 2.52
4094 4391 0.899720 TACCCGAAAGTGCCGAATCT 59.100 50.000 0.00 0.00 0.00 2.40
4223 4521 9.928236 GAATCATAGTCTTGCAGAACTTATTTC 57.072 33.333 8.19 4.74 33.95 2.17
4246 4544 1.284785 TCCCCAATGATGACAGTTCCC 59.715 52.381 0.00 0.00 0.00 3.97
4251 4549 2.615447 CAATGATGACAGTTCCCGATGG 59.385 50.000 0.00 0.00 0.00 3.51
4288 4586 4.501229 GGCTCACATATCTCCAGTCTTGAG 60.501 50.000 0.00 0.00 33.78 3.02
4359 4658 5.011023 CACATCTGGTGCCAGTAGTATATCA 59.989 44.000 16.85 0.00 43.96 2.15
4414 4713 3.726517 CCGGCGGTGAAGCAGTTG 61.727 66.667 19.97 0.00 39.27 3.16
4461 4760 1.134610 CGCCGGGATTACCTTGTAAGT 60.135 52.381 2.18 0.00 36.97 2.24
4519 4818 2.421670 CCTCAGGTAAGCCTCTCGACTA 60.422 54.545 0.00 0.00 44.97 2.59
4523 4822 2.158784 AGGTAAGCCTCTCGACTACGAT 60.159 50.000 0.00 0.00 42.67 3.73
4603 4902 4.724399 TCAGGGTGCTTTCTATTTGTTCA 58.276 39.130 0.00 0.00 0.00 3.18
4626 4925 1.677052 GACTTCAGCTCCTACTACGGG 59.323 57.143 0.00 0.00 0.00 5.28
4629 4928 0.917533 TCAGCTCCTACTACGGGTCT 59.082 55.000 0.00 0.00 0.00 3.85
4650 4949 0.404426 AGGTAGAGGGTTTTGGCACC 59.596 55.000 0.00 0.00 35.88 5.01
4659 4958 1.901833 GGTTTTGGCACCATCAAGGAT 59.098 47.619 0.00 0.00 41.22 3.24
4711 5010 0.033504 AGCACAGGTGACGGTTACAG 59.966 55.000 3.10 0.00 36.26 2.74
4724 5023 2.423577 GGTTACAGCCATTTCGAGTGT 58.576 47.619 0.00 0.00 0.00 3.55
4759 5059 2.919602 ACAAGATCAATGGGTAGGTGGT 59.080 45.455 0.00 0.00 0.00 4.16
4818 5118 1.227102 CCCCGGAGATGCATTTGGA 59.773 57.895 0.73 0.00 0.00 3.53
4845 5145 4.287552 ACAAGGGTGTTCGTATCTCCTAT 58.712 43.478 0.00 0.00 32.58 2.57
4931 5231 3.814268 CCCTGCCGCGGTTCAATG 61.814 66.667 28.70 10.58 0.00 2.82
5128 5430 5.143376 CCTGCAGGTCAGAAATGAAAATT 57.857 39.130 25.53 0.00 45.72 1.82
5250 5553 5.349543 CCTGCCTTTTCAGCATTTTATCAAC 59.650 40.000 0.00 0.00 40.04 3.18
5251 5554 5.851720 TGCCTTTTCAGCATTTTATCAACA 58.148 33.333 0.00 0.00 34.69 3.33
5580 5896 5.308825 AGTCCCAACTGAAAAGTACTGATG 58.691 41.667 0.00 0.00 33.32 3.07
5660 5976 8.049117 TGAATAAGTAAGAGTGCAGAATCCAAT 58.951 33.333 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.004419 ACATGAGACGAAACGTGAGAGAA 59.996 43.478 0.00 0.00 41.37 2.87
2 3 2.658802 CACATGAGACGAAACGTGAGAG 59.341 50.000 0.00 0.00 41.37 3.20
3 4 2.034179 ACACATGAGACGAAACGTGAGA 59.966 45.455 0.00 0.00 41.37 3.27
4 5 2.394708 ACACATGAGACGAAACGTGAG 58.605 47.619 0.00 0.00 41.37 3.51
6 7 2.096909 GGAACACATGAGACGAAACGTG 60.097 50.000 0.00 0.00 41.37 4.49
7 8 2.132762 GGAACACATGAGACGAAACGT 58.867 47.619 0.00 0.00 45.10 3.99
8 9 2.404215 AGGAACACATGAGACGAAACG 58.596 47.619 0.00 0.00 0.00 3.60
9 10 3.390135 TGAGGAACACATGAGACGAAAC 58.610 45.455 0.00 0.00 0.00 2.78
10 11 3.744238 TGAGGAACACATGAGACGAAA 57.256 42.857 0.00 0.00 0.00 3.46
11 12 3.390135 GTTGAGGAACACATGAGACGAA 58.610 45.455 0.00 0.00 31.78 3.85
12 13 2.607038 CGTTGAGGAACACATGAGACGA 60.607 50.000 0.00 0.00 30.09 4.20
13 14 1.721389 CGTTGAGGAACACATGAGACG 59.279 52.381 0.00 0.00 31.78 4.18
14 15 3.026630 TCGTTGAGGAACACATGAGAC 57.973 47.619 0.00 0.00 31.78 3.36
15 16 3.320826 TCTTCGTTGAGGAACACATGAGA 59.679 43.478 0.00 0.00 31.78 3.27
16 17 3.653344 TCTTCGTTGAGGAACACATGAG 58.347 45.455 0.00 0.00 31.78 2.90
17 18 3.744238 TCTTCGTTGAGGAACACATGA 57.256 42.857 0.00 0.00 31.78 3.07
18 19 6.092670 ACATATTCTTCGTTGAGGAACACATG 59.907 38.462 0.00 0.00 30.84 3.21
19 20 6.173339 ACATATTCTTCGTTGAGGAACACAT 58.827 36.000 0.00 0.00 30.84 3.21
20 21 5.547465 ACATATTCTTCGTTGAGGAACACA 58.453 37.500 0.00 0.00 30.84 3.72
21 22 6.588756 TGTACATATTCTTCGTTGAGGAACAC 59.411 38.462 0.00 0.00 30.84 3.32
22 23 6.693466 TGTACATATTCTTCGTTGAGGAACA 58.307 36.000 0.00 0.00 30.84 3.18
23 24 7.772332 ATGTACATATTCTTCGTTGAGGAAC 57.228 36.000 6.56 0.00 30.84 3.62
24 25 8.786826 AAATGTACATATTCTTCGTTGAGGAA 57.213 30.769 9.21 0.00 32.52 3.36
25 26 8.038351 TGAAATGTACATATTCTTCGTTGAGGA 58.962 33.333 21.08 2.22 0.00 3.71
26 27 8.196802 TGAAATGTACATATTCTTCGTTGAGG 57.803 34.615 21.08 0.00 0.00 3.86
28 29 9.820229 GTTTGAAATGTACATATTCTTCGTTGA 57.180 29.630 21.08 1.71 0.00 3.18
29 30 9.825972 AGTTTGAAATGTACATATTCTTCGTTG 57.174 29.630 21.08 0.00 0.00 4.10
30 31 9.825972 CAGTTTGAAATGTACATATTCTTCGTT 57.174 29.630 21.08 8.04 0.00 3.85
31 32 9.214957 TCAGTTTGAAATGTACATATTCTTCGT 57.785 29.630 21.08 1.01 0.00 3.85
43 44 9.342308 GGGATCTCATAATCAGTTTGAAATGTA 57.658 33.333 0.00 0.00 30.46 2.29
44 45 7.286316 GGGGATCTCATAATCAGTTTGAAATGT 59.714 37.037 0.00 0.00 30.46 2.71
45 46 7.286087 TGGGGATCTCATAATCAGTTTGAAATG 59.714 37.037 0.00 0.75 0.00 2.32
46 47 7.286316 GTGGGGATCTCATAATCAGTTTGAAAT 59.714 37.037 0.00 0.00 0.00 2.17
47 48 6.603201 GTGGGGATCTCATAATCAGTTTGAAA 59.397 38.462 0.00 0.00 0.00 2.69
48 49 6.122277 GTGGGGATCTCATAATCAGTTTGAA 58.878 40.000 0.00 0.00 0.00 2.69
49 50 5.191522 TGTGGGGATCTCATAATCAGTTTGA 59.808 40.000 0.00 0.00 0.00 2.69
50 51 5.439721 TGTGGGGATCTCATAATCAGTTTG 58.560 41.667 0.00 0.00 0.00 2.93
51 52 5.715439 TGTGGGGATCTCATAATCAGTTT 57.285 39.130 0.00 0.00 0.00 2.66
52 53 5.715439 TTGTGGGGATCTCATAATCAGTT 57.285 39.130 0.00 0.00 0.00 3.16
53 54 5.715439 TTTGTGGGGATCTCATAATCAGT 57.285 39.130 0.00 0.00 0.00 3.41
80 81 9.436957 AGTTGTTTCGTTATCTCATAATCAGTT 57.563 29.630 0.00 0.00 0.00 3.16
89 90 9.069078 CGAGTAATTAGTTGTTTCGTTATCTCA 57.931 33.333 0.00 0.00 0.00 3.27
90 91 8.529911 CCGAGTAATTAGTTGTTTCGTTATCTC 58.470 37.037 6.77 0.00 0.00 2.75
91 92 8.031277 ACCGAGTAATTAGTTGTTTCGTTATCT 58.969 33.333 6.77 0.00 0.00 1.98
92 93 8.177980 ACCGAGTAATTAGTTGTTTCGTTATC 57.822 34.615 6.77 0.00 0.00 1.75
93 94 8.538409 AACCGAGTAATTAGTTGTTTCGTTAT 57.462 30.769 6.77 0.00 0.00 1.89
94 95 7.945033 AACCGAGTAATTAGTTGTTTCGTTA 57.055 32.000 6.77 0.00 0.00 3.18
95 96 6.849588 AACCGAGTAATTAGTTGTTTCGTT 57.150 33.333 6.77 1.80 0.00 3.85
96 97 6.073602 GGAAACCGAGTAATTAGTTGTTTCGT 60.074 38.462 24.76 10.17 31.45 3.85
97 98 6.301861 GGAAACCGAGTAATTAGTTGTTTCG 58.698 40.000 24.76 13.28 31.45 3.46
98 99 6.605849 GGGAAACCGAGTAATTAGTTGTTTC 58.394 40.000 24.31 24.31 43.64 2.78
99 100 6.564709 GGGAAACCGAGTAATTAGTTGTTT 57.435 37.500 15.96 15.96 43.64 2.83
116 117 9.984190 TGTATAACCTAAATTGTTTTGGGAAAC 57.016 29.630 7.71 0.00 44.11 2.78
144 145 4.634443 AGCGTATTTAGCATCGAGGTTTTT 59.366 37.500 0.00 0.00 37.01 1.94
145 146 4.189231 AGCGTATTTAGCATCGAGGTTTT 58.811 39.130 0.00 0.00 37.01 2.43
146 147 3.793559 AGCGTATTTAGCATCGAGGTTT 58.206 40.909 0.00 0.00 37.01 3.27
147 148 3.454371 AGCGTATTTAGCATCGAGGTT 57.546 42.857 0.00 0.00 37.01 3.50
148 149 3.454371 AAGCGTATTTAGCATCGAGGT 57.546 42.857 0.00 0.00 37.01 3.85
149 150 4.295870 TGTAAGCGTATTTAGCATCGAGG 58.704 43.478 0.00 0.00 37.01 4.63
150 151 5.883328 TTGTAAGCGTATTTAGCATCGAG 57.117 39.130 0.00 0.00 37.01 4.04
151 152 6.037726 TCTTTGTAAGCGTATTTAGCATCGA 58.962 36.000 0.00 0.00 37.01 3.59
152 153 6.268797 TCTTTGTAAGCGTATTTAGCATCG 57.731 37.500 0.00 0.00 37.01 3.84
153 154 7.004225 CGATCTTTGTAAGCGTATTTAGCATC 58.996 38.462 0.00 0.00 37.01 3.91
154 155 6.479001 ACGATCTTTGTAAGCGTATTTAGCAT 59.521 34.615 0.00 0.00 37.01 3.79
155 156 5.808540 ACGATCTTTGTAAGCGTATTTAGCA 59.191 36.000 0.00 0.00 37.01 3.49
156 157 6.020121 TCACGATCTTTGTAAGCGTATTTAGC 60.020 38.462 0.00 0.00 33.45 3.09
157 158 7.445900 TCACGATCTTTGTAAGCGTATTTAG 57.554 36.000 0.00 0.00 33.45 1.85
158 159 7.815398 TTCACGATCTTTGTAAGCGTATTTA 57.185 32.000 0.00 0.00 33.45 1.40
159 160 6.715344 TTCACGATCTTTGTAAGCGTATTT 57.285 33.333 0.00 0.00 33.45 1.40
160 161 6.715344 TTTCACGATCTTTGTAAGCGTATT 57.285 33.333 0.00 0.00 33.45 1.89
161 162 6.312918 ACATTTCACGATCTTTGTAAGCGTAT 59.687 34.615 0.00 0.00 33.45 3.06
162 163 5.636121 ACATTTCACGATCTTTGTAAGCGTA 59.364 36.000 0.00 0.00 33.45 4.42
163 164 4.451096 ACATTTCACGATCTTTGTAAGCGT 59.549 37.500 0.00 0.00 35.33 5.07
164 165 4.957971 ACATTTCACGATCTTTGTAAGCG 58.042 39.130 0.00 0.00 0.00 4.68
165 166 7.684670 TGATACATTTCACGATCTTTGTAAGC 58.315 34.615 0.00 0.00 0.00 3.09
166 167 9.642312 CATGATACATTTCACGATCTTTGTAAG 57.358 33.333 0.00 0.00 0.00 2.34
167 168 9.377312 TCATGATACATTTCACGATCTTTGTAA 57.623 29.630 0.00 0.00 0.00 2.41
168 169 8.940768 TCATGATACATTTCACGATCTTTGTA 57.059 30.769 0.00 0.00 0.00 2.41
169 170 7.848223 TCATGATACATTTCACGATCTTTGT 57.152 32.000 0.00 0.00 0.00 2.83
170 171 7.854422 CCTTCATGATACATTTCACGATCTTTG 59.146 37.037 0.00 0.00 0.00 2.77
171 172 7.770433 TCCTTCATGATACATTTCACGATCTTT 59.230 33.333 0.00 0.00 0.00 2.52
172 173 7.275183 TCCTTCATGATACATTTCACGATCTT 58.725 34.615 0.00 0.00 0.00 2.40
173 174 6.820335 TCCTTCATGATACATTTCACGATCT 58.180 36.000 0.00 0.00 0.00 2.75
174 175 6.925718 TCTCCTTCATGATACATTTCACGATC 59.074 38.462 0.00 0.00 0.00 3.69
175 176 6.820335 TCTCCTTCATGATACATTTCACGAT 58.180 36.000 0.00 0.00 0.00 3.73
176 177 6.220726 TCTCCTTCATGATACATTTCACGA 57.779 37.500 0.00 0.00 0.00 4.35
177 178 6.927936 AGATCTCCTTCATGATACATTTCACG 59.072 38.462 0.00 0.00 0.00 4.35
178 179 8.674263 AAGATCTCCTTCATGATACATTTCAC 57.326 34.615 0.00 0.00 0.00 3.18
179 180 9.770097 GTAAGATCTCCTTCATGATACATTTCA 57.230 33.333 0.00 0.00 36.34 2.69
180 181 8.920665 CGTAAGATCTCCTTCATGATACATTTC 58.079 37.037 0.00 0.00 43.02 2.17
181 182 8.642432 TCGTAAGATCTCCTTCATGATACATTT 58.358 33.333 0.00 0.00 45.01 2.32
182 183 8.183104 TCGTAAGATCTCCTTCATGATACATT 57.817 34.615 0.00 0.00 45.01 2.71
183 184 7.767250 TCGTAAGATCTCCTTCATGATACAT 57.233 36.000 0.00 0.00 45.01 2.29
201 202 0.457337 GCCCACGGTGTAGTCGTAAG 60.457 60.000 7.45 0.00 38.94 2.34
202 203 1.586028 GCCCACGGTGTAGTCGTAA 59.414 57.895 7.45 0.00 38.94 3.18
203 204 2.342650 GGCCCACGGTGTAGTCGTA 61.343 63.158 7.45 0.00 38.94 3.43
204 205 3.688159 GGCCCACGGTGTAGTCGT 61.688 66.667 7.45 0.00 41.93 4.34
205 206 3.687102 TGGCCCACGGTGTAGTCG 61.687 66.667 7.45 0.00 0.00 4.18
206 207 1.252904 TAGTGGCCCACGGTGTAGTC 61.253 60.000 8.52 0.16 39.64 2.59
207 208 0.832983 TTAGTGGCCCACGGTGTAGT 60.833 55.000 8.52 0.00 39.64 2.73
208 209 0.108329 CTTAGTGGCCCACGGTGTAG 60.108 60.000 8.52 0.00 39.64 2.74
209 210 1.976898 CTTAGTGGCCCACGGTGTA 59.023 57.895 8.52 0.00 39.64 2.90
210 211 2.747686 CTTAGTGGCCCACGGTGT 59.252 61.111 8.52 0.00 39.64 4.16
211 212 2.746277 GCTTAGTGGCCCACGGTG 60.746 66.667 8.52 0.00 39.64 4.94
212 213 1.196104 TAAGCTTAGTGGCCCACGGT 61.196 55.000 8.52 0.00 39.64 4.83
213 214 0.743345 GTAAGCTTAGTGGCCCACGG 60.743 60.000 8.52 4.26 39.64 4.94
214 215 0.036765 TGTAAGCTTAGTGGCCCACG 60.037 55.000 8.52 0.00 39.64 4.94
215 216 2.017049 CATGTAAGCTTAGTGGCCCAC 58.983 52.381 5.50 5.50 34.10 4.61
216 217 1.633432 ACATGTAAGCTTAGTGGCCCA 59.367 47.619 18.16 8.63 0.00 5.36
217 218 2.092914 AGACATGTAAGCTTAGTGGCCC 60.093 50.000 17.07 9.18 0.00 5.80
218 219 2.939103 CAGACATGTAAGCTTAGTGGCC 59.061 50.000 17.07 0.00 0.00 5.36
219 220 3.600388 ACAGACATGTAAGCTTAGTGGC 58.400 45.455 18.16 16.28 38.09 5.01
220 221 4.820897 TGACAGACATGTAAGCTTAGTGG 58.179 43.478 18.16 9.27 40.68 4.00
221 222 6.974932 AATGACAGACATGTAAGCTTAGTG 57.025 37.500 6.38 11.37 40.68 2.74
222 223 9.319143 GATTAATGACAGACATGTAAGCTTAGT 57.681 33.333 6.38 1.03 40.68 2.24
223 224 9.539825 AGATTAATGACAGACATGTAAGCTTAG 57.460 33.333 6.38 0.00 40.68 2.18
225 226 9.539825 CTAGATTAATGACAGACATGTAAGCTT 57.460 33.333 3.48 3.48 40.68 3.74
226 227 8.700051 ACTAGATTAATGACAGACATGTAAGCT 58.300 33.333 0.00 0.00 40.68 3.74
227 228 8.879342 ACTAGATTAATGACAGACATGTAAGC 57.121 34.615 0.00 0.00 40.68 3.09
230 231 9.408648 TCAGACTAGATTAATGACAGACATGTA 57.591 33.333 0.00 0.00 40.68 2.29
231 232 8.298729 TCAGACTAGATTAATGACAGACATGT 57.701 34.615 0.00 0.00 44.31 3.21
232 233 9.761504 ATTCAGACTAGATTAATGACAGACATG 57.238 33.333 0.00 0.00 39.39 3.21
247 248 9.243105 CCCCAAATTCTTAAAATTCAGACTAGA 57.757 33.333 0.00 0.00 0.00 2.43
248 249 9.025041 ACCCCAAATTCTTAAAATTCAGACTAG 57.975 33.333 0.00 0.00 0.00 2.57
249 250 8.950007 ACCCCAAATTCTTAAAATTCAGACTA 57.050 30.769 0.00 0.00 0.00 2.59
250 251 7.855784 ACCCCAAATTCTTAAAATTCAGACT 57.144 32.000 0.00 0.00 0.00 3.24
251 252 8.581578 TGTACCCCAAATTCTTAAAATTCAGAC 58.418 33.333 0.00 0.00 0.00 3.51
252 253 8.713708 TGTACCCCAAATTCTTAAAATTCAGA 57.286 30.769 0.00 0.00 0.00 3.27
259 260 8.973182 GGTTCATATGTACCCCAAATTCTTAAA 58.027 33.333 18.28 0.00 30.30 1.52
260 261 7.562088 GGGTTCATATGTACCCCAAATTCTTAA 59.438 37.037 30.94 0.00 46.36 1.85
261 262 7.064229 GGGTTCATATGTACCCCAAATTCTTA 58.936 38.462 30.94 0.00 46.36 2.10
262 263 5.897250 GGGTTCATATGTACCCCAAATTCTT 59.103 40.000 30.94 0.00 46.36 2.52
263 264 5.454966 GGGTTCATATGTACCCCAAATTCT 58.545 41.667 30.94 0.00 46.36 2.40
264 265 5.784578 GGGTTCATATGTACCCCAAATTC 57.215 43.478 30.94 11.30 46.36 2.17
324 328 6.642950 CCCAATACACGAACTATTTGCAAAAA 59.357 34.615 17.19 0.00 0.00 1.94
349 353 2.934553 GCCGTAATGGGTGAGTTTCTAC 59.065 50.000 0.00 0.00 38.63 2.59
390 394 7.155328 CAGTACTTGTGACTACAAATTCCTCT 58.845 38.462 0.00 0.00 45.53 3.69
391 395 6.929606 ACAGTACTTGTGACTACAAATTCCTC 59.070 38.462 0.00 0.00 45.53 3.71
410 414 5.932303 TGAGAAAATGTGGAAGCTACAGTAC 59.068 40.000 0.00 0.00 0.00 2.73
540 548 8.985805 GTCTCAAAACTTAGGAAAGAAATCGTA 58.014 33.333 0.00 0.00 36.50 3.43
576 585 6.775142 TCACTTTGGGAATGTAGTGAAAATCA 59.225 34.615 0.00 0.00 42.76 2.57
586 595 6.377996 CAGGATGAATTCACTTTGGGAATGTA 59.622 38.462 11.07 0.00 39.69 2.29
588 597 5.186409 ACAGGATGAATTCACTTTGGGAATG 59.814 40.000 11.07 2.81 39.69 2.67
594 603 9.865321 AAAATGATACAGGATGAATTCACTTTG 57.135 29.630 11.07 11.24 39.69 2.77
610 619 6.312672 ACGTGATCAATGACGAAAATGATACA 59.687 34.615 8.95 0.00 39.79 2.29
611 620 6.705782 ACGTGATCAATGACGAAAATGATAC 58.294 36.000 8.95 0.00 39.79 2.24
1018 1030 3.412408 GGAGGAGGAAGGGGTGGC 61.412 72.222 0.00 0.00 0.00 5.01
1136 1148 2.234661 AGCGGACAGATCAATCAAGACA 59.765 45.455 0.00 0.00 0.00 3.41
1137 1149 2.606725 CAGCGGACAGATCAATCAAGAC 59.393 50.000 0.00 0.00 0.00 3.01
1140 1152 1.372582 GCAGCGGACAGATCAATCAA 58.627 50.000 0.00 0.00 0.00 2.57
1141 1153 0.462581 GGCAGCGGACAGATCAATCA 60.463 55.000 0.00 0.00 0.00 2.57
1186 1198 1.239968 CCCTGCAACCAGAGAAGCAC 61.240 60.000 0.00 0.00 41.77 4.40
1218 1230 4.473520 CCGCCGCCATCCTGAACT 62.474 66.667 0.00 0.00 0.00 3.01
1587 1614 6.477360 GGGAATTTGAAGCGAACTAACAAAAA 59.523 34.615 0.00 0.00 36.56 1.94
1588 1615 5.980715 GGGAATTTGAAGCGAACTAACAAAA 59.019 36.000 0.00 0.00 36.56 2.44
1589 1616 5.508320 GGGGAATTTGAAGCGAACTAACAAA 60.508 40.000 0.00 0.00 37.02 2.83
1597 1624 2.962421 ACAAAGGGGAATTTGAAGCGAA 59.038 40.909 6.22 0.00 41.71 4.70
1785 1861 6.130298 TGGTAAAACTGGATTCATAATGCG 57.870 37.500 0.00 0.00 31.00 4.73
1786 1862 5.979517 GCTGGTAAAACTGGATTCATAATGC 59.020 40.000 0.00 0.00 0.00 3.56
1787 1863 6.507023 GGCTGGTAAAACTGGATTCATAATG 58.493 40.000 0.00 0.00 0.00 1.90
1788 1864 5.299279 CGGCTGGTAAAACTGGATTCATAAT 59.701 40.000 0.00 0.00 0.00 1.28
1789 1865 4.638421 CGGCTGGTAAAACTGGATTCATAA 59.362 41.667 0.00 0.00 0.00 1.90
1790 1866 4.196193 CGGCTGGTAAAACTGGATTCATA 58.804 43.478 0.00 0.00 0.00 2.15
1791 1867 3.016736 CGGCTGGTAAAACTGGATTCAT 58.983 45.455 0.00 0.00 0.00 2.57
1792 1868 2.432444 CGGCTGGTAAAACTGGATTCA 58.568 47.619 0.00 0.00 0.00 2.57
1793 1869 1.743394 CCGGCTGGTAAAACTGGATTC 59.257 52.381 2.29 0.00 30.92 2.52
1794 1870 1.834188 CCGGCTGGTAAAACTGGATT 58.166 50.000 2.29 0.00 30.92 3.01
1795 1871 0.679960 GCCGGCTGGTAAAACTGGAT 60.680 55.000 22.15 0.00 37.67 3.41
1796 1872 1.302993 GCCGGCTGGTAAAACTGGA 60.303 57.895 22.15 0.00 37.67 3.86
1797 1873 0.965363 ATGCCGGCTGGTAAAACTGG 60.965 55.000 29.70 0.00 37.67 4.00
1798 1874 1.670811 CTATGCCGGCTGGTAAAACTG 59.329 52.381 29.70 2.31 37.67 3.16
1799 1875 2.017113 GCTATGCCGGCTGGTAAAACT 61.017 52.381 29.70 0.00 37.67 2.66
1800 1876 0.380733 GCTATGCCGGCTGGTAAAAC 59.619 55.000 29.70 5.05 37.67 2.43
1801 1877 0.034960 TGCTATGCCGGCTGGTAAAA 60.035 50.000 29.70 5.17 37.67 1.52
1802 1878 0.034960 TTGCTATGCCGGCTGGTAAA 60.035 50.000 29.70 13.89 37.67 2.01
1803 1879 0.034960 TTTGCTATGCCGGCTGGTAA 60.035 50.000 29.70 18.85 37.67 2.85
1804 1880 0.034960 TTTTGCTATGCCGGCTGGTA 60.035 50.000 29.70 16.37 37.67 3.25
1805 1881 0.684153 ATTTTGCTATGCCGGCTGGT 60.684 50.000 29.70 16.10 37.67 4.00
1806 1882 0.461135 AATTTTGCTATGCCGGCTGG 59.539 50.000 29.70 17.89 38.77 4.85
1807 1883 2.298411 AAATTTTGCTATGCCGGCTG 57.702 45.000 29.70 18.36 0.00 4.85
1808 1884 4.370917 CATTAAATTTTGCTATGCCGGCT 58.629 39.130 29.70 15.76 0.00 5.52
1809 1885 3.059665 GCATTAAATTTTGCTATGCCGGC 60.060 43.478 22.73 22.73 36.48 6.13
1810 1886 4.118410 TGCATTAAATTTTGCTATGCCGG 58.882 39.130 14.29 0.00 40.56 6.13
1811 1887 5.107375 GGATGCATTAAATTTTGCTATGCCG 60.107 40.000 14.29 0.00 40.56 5.69
1812 1888 5.993441 AGGATGCATTAAATTTTGCTATGCC 59.007 36.000 14.29 10.32 40.56 4.40
1813 1889 6.702723 TCAGGATGCATTAAATTTTGCTATGC 59.297 34.615 14.29 14.64 41.39 3.14
1814 1890 8.651391 TTCAGGATGCATTAAATTTTGCTATG 57.349 30.769 14.29 8.66 39.60 2.23
1815 1891 9.485206 GATTCAGGATGCATTAAATTTTGCTAT 57.515 29.630 14.29 7.58 39.60 2.97
1816 1892 7.927629 GGATTCAGGATGCATTAAATTTTGCTA 59.072 33.333 14.29 3.80 39.60 3.49
1817 1893 6.764560 GGATTCAGGATGCATTAAATTTTGCT 59.235 34.615 14.29 2.58 39.60 3.91
1818 1894 6.539464 TGGATTCAGGATGCATTAAATTTTGC 59.461 34.615 0.00 7.74 39.33 3.68
1819 1895 7.767198 ACTGGATTCAGGATGCATTAAATTTTG 59.233 33.333 5.84 0.00 44.99 2.44
1820 1896 7.854337 ACTGGATTCAGGATGCATTAAATTTT 58.146 30.769 5.84 0.00 44.99 1.82
1821 1897 7.427989 ACTGGATTCAGGATGCATTAAATTT 57.572 32.000 5.84 0.00 44.99 1.82
1822 1898 7.427989 AACTGGATTCAGGATGCATTAAATT 57.572 32.000 5.84 0.00 44.99 1.82
1823 1899 7.427989 AAACTGGATTCAGGATGCATTAAAT 57.572 32.000 5.84 0.00 44.99 1.40
1824 1900 6.855763 AAACTGGATTCAGGATGCATTAAA 57.144 33.333 5.84 0.00 44.99 1.52
1825 1901 6.127366 GGAAAACTGGATTCAGGATGCATTAA 60.127 38.462 5.84 0.00 44.99 1.40
1826 1902 5.360714 GGAAAACTGGATTCAGGATGCATTA 59.639 40.000 5.84 0.00 44.99 1.90
1827 1903 4.161001 GGAAAACTGGATTCAGGATGCATT 59.839 41.667 5.84 0.00 44.99 3.56
1828 1904 3.703052 GGAAAACTGGATTCAGGATGCAT 59.297 43.478 5.84 0.00 44.99 3.96
1876 1952 7.849804 TGCTGAATCCAATTTTACTACTCTC 57.150 36.000 0.00 0.00 0.00 3.20
1904 1980 4.074259 AGCCTGGGCAAAAATCAAAATTC 58.926 39.130 14.39 0.00 44.88 2.17
2029 2105 4.071423 TCTGCAAACGAGAAATTCATCCA 58.929 39.130 0.00 0.00 0.00 3.41
2228 2304 3.915437 AAAAATTGCGGTGTACAGAGG 57.085 42.857 0.00 0.00 0.00 3.69
2273 2349 3.368236 GCTGCTTTAGTACAACTTCGGAG 59.632 47.826 0.00 0.00 0.00 4.63
2300 2431 6.424883 AGTACTCCCTCCGATCGATATTAAT 58.575 40.000 18.66 0.00 0.00 1.40
2308 2439 1.158434 GCTAGTACTCCCTCCGATCG 58.842 60.000 8.51 8.51 0.00 3.69
2433 2565 4.590647 TGGAAGACCCAAACAATATTTGCA 59.409 37.500 0.00 0.00 43.29 4.08
2564 2696 3.764885 ACATTTAGTGATGCCGCTTTC 57.235 42.857 0.00 0.00 34.50 2.62
2642 2775 6.640518 ACAAAGCTCTTACGATATCAAGGAA 58.359 36.000 3.12 0.00 0.00 3.36
2653 2786 7.220108 GCCCAAAATTATTACAAAGCTCTTACG 59.780 37.037 0.00 0.00 0.00 3.18
2687 2977 2.203126 GCCCCTGCATCCGAAGAG 60.203 66.667 0.00 0.00 37.47 2.85
2820 3112 6.598064 GGCTTGTTTACTCCAGATTAAGCTAA 59.402 38.462 0.00 0.00 39.25 3.09
3127 3419 0.545646 AATCTCCTCAAGCAGCTCCC 59.454 55.000 0.00 0.00 0.00 4.30
3273 3565 7.613022 TCTCATCAGATAGAACCTGCAAAAATT 59.387 33.333 0.00 0.00 0.00 1.82
3494 3786 2.830321 AGTATTTTCGAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
3495 3787 3.521947 AGTATTTTCGAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
3496 3788 3.007182 ACAAGTATTTTCGAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
3497 3789 3.332034 ACAAGTATTTTCGAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
3498 3790 3.991773 TGACAAGTATTTTCGAACGGAGG 59.008 43.478 0.00 0.00 0.00 4.30
3499 3791 5.347635 TGATGACAAGTATTTTCGAACGGAG 59.652 40.000 0.00 0.00 0.00 4.63
3500 3792 5.231702 TGATGACAAGTATTTTCGAACGGA 58.768 37.500 0.00 0.00 0.00 4.69
3501 3793 5.524511 TGATGACAAGTATTTTCGAACGG 57.475 39.130 0.00 0.00 0.00 4.44
3502 3794 7.830217 TTTTGATGACAAGTATTTTCGAACG 57.170 32.000 0.00 0.00 37.32 3.95
3503 3795 8.638565 CCATTTTGATGACAAGTATTTTCGAAC 58.361 33.333 0.00 0.00 37.32 3.95
3504 3796 8.572185 TCCATTTTGATGACAAGTATTTTCGAA 58.428 29.630 0.00 0.00 37.32 3.71
3505 3797 8.105097 TCCATTTTGATGACAAGTATTTTCGA 57.895 30.769 0.00 0.00 37.32 3.71
3506 3798 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
3513 3805 8.096414 CCCTTTTTATCCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
3514 3806 7.064966 GCCCTTTTTATCCATTTTGATGACAAG 59.935 37.037 0.00 0.00 37.32 3.16
3515 3807 6.878389 GCCCTTTTTATCCATTTTGATGACAA 59.122 34.615 0.00 0.00 0.00 3.18
3516 3808 6.213195 AGCCCTTTTTATCCATTTTGATGACA 59.787 34.615 0.00 0.00 0.00 3.58
3517 3809 6.536224 CAGCCCTTTTTATCCATTTTGATGAC 59.464 38.462 0.00 0.00 0.00 3.06
3518 3810 6.213195 ACAGCCCTTTTTATCCATTTTGATGA 59.787 34.615 0.00 0.00 0.00 2.92
3519 3811 6.408869 ACAGCCCTTTTTATCCATTTTGATG 58.591 36.000 0.00 0.00 0.00 3.07
3520 3812 6.625532 ACAGCCCTTTTTATCCATTTTGAT 57.374 33.333 0.00 0.00 0.00 2.57
3521 3813 7.619302 AGATACAGCCCTTTTTATCCATTTTGA 59.381 33.333 0.00 0.00 0.00 2.69
3522 3814 7.785033 AGATACAGCCCTTTTTATCCATTTTG 58.215 34.615 0.00 0.00 0.00 2.44
3523 3815 7.978099 AGATACAGCCCTTTTTATCCATTTT 57.022 32.000 0.00 0.00 0.00 1.82
3526 3818 9.740710 GTTATAGATACAGCCCTTTTTATCCAT 57.259 33.333 0.00 0.00 0.00 3.41
3527 3819 8.945193 AGTTATAGATACAGCCCTTTTTATCCA 58.055 33.333 0.00 0.00 0.00 3.41
3535 3827 9.924650 CGTATTTTAGTTATAGATACAGCCCTT 57.075 33.333 0.00 0.00 0.00 3.95
3536 3828 9.086758 ACGTATTTTAGTTATAGATACAGCCCT 57.913 33.333 0.00 0.00 0.00 5.19
3537 3829 9.351570 GACGTATTTTAGTTATAGATACAGCCC 57.648 37.037 0.00 0.00 0.00 5.19
3550 3842 8.583296 GGGGATGTATCTAGACGTATTTTAGTT 58.417 37.037 0.00 0.00 0.00 2.24
3551 3843 7.949006 AGGGGATGTATCTAGACGTATTTTAGT 59.051 37.037 0.00 0.00 0.00 2.24
3552 3844 8.350852 AGGGGATGTATCTAGACGTATTTTAG 57.649 38.462 0.00 0.00 0.00 1.85
3553 3845 8.716674 AAGGGGATGTATCTAGACGTATTTTA 57.283 34.615 0.00 0.00 0.00 1.52
3554 3846 7.613551 AAGGGGATGTATCTAGACGTATTTT 57.386 36.000 0.00 0.00 0.00 1.82
3555 3847 7.613551 AAAGGGGATGTATCTAGACGTATTT 57.386 36.000 0.00 0.00 0.00 1.40
3556 3848 7.613551 AAAAGGGGATGTATCTAGACGTATT 57.386 36.000 0.00 0.00 0.00 1.89
3557 3849 8.896722 ATAAAAGGGGATGTATCTAGACGTAT 57.103 34.615 0.00 0.00 0.00 3.06
3558 3850 8.716674 AATAAAAGGGGATGTATCTAGACGTA 57.283 34.615 0.00 0.00 0.00 3.57
3559 3851 7.289317 TGAATAAAAGGGGATGTATCTAGACGT 59.711 37.037 0.00 0.00 0.00 4.34
3560 3852 7.667557 TGAATAAAAGGGGATGTATCTAGACG 58.332 38.462 0.00 0.00 0.00 4.18
3565 3857 9.713684 TCAAATTGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
3568 3860 9.486123 TCATCAAATTGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 32.47 2.29
3569 3861 8.260114 GTCATCAAATTGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 32.47 3.06
3570 3862 8.259411 TGTCATCAAATTGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 0.00 3.51
3571 3863 8.378115 TGTCATCAAATTGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 0.00 3.85
3572 3864 7.789202 TGTCATCAAATTGAATAAAAGGGGA 57.211 32.000 0.00 0.00 0.00 4.81
3573 3865 8.096414 ACTTGTCATCAAATTGAATAAAAGGGG 58.904 33.333 0.00 0.00 32.87 4.79
3581 3873 7.975616 CCGGAAATACTTGTCATCAAATTGAAT 59.024 33.333 0.00 0.00 32.87 2.57
3582 3874 7.175816 TCCGGAAATACTTGTCATCAAATTGAA 59.824 33.333 0.00 0.00 32.87 2.69
3583 3875 6.657117 TCCGGAAATACTTGTCATCAAATTGA 59.343 34.615 0.00 0.00 32.87 2.57
3584 3876 6.747280 GTCCGGAAATACTTGTCATCAAATTG 59.253 38.462 5.23 0.00 32.87 2.32
3585 3877 6.403200 CGTCCGGAAATACTTGTCATCAAATT 60.403 38.462 5.23 0.00 32.87 1.82
3586 3878 5.064707 CGTCCGGAAATACTTGTCATCAAAT 59.935 40.000 5.23 0.00 32.87 2.32
3587 3879 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
3588 3880 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
3589 3881 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
3590 3882 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
3591 3883 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3592 3884 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3593 3885 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3594 3886 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3595 3887 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3596 3888 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3597 3889 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3598 3890 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3599 3891 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3600 3892 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3601 3893 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
3602 3894 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
3603 3895 0.846015 TAATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
3604 3896 1.245732 CTAATACTCCCTCCGTCCGG 58.754 60.000 0.00 0.00 0.00 5.14
3605 3897 1.878734 GACTAATACTCCCTCCGTCCG 59.121 57.143 0.00 0.00 0.00 4.79
3606 3898 2.941480 TGACTAATACTCCCTCCGTCC 58.059 52.381 0.00 0.00 0.00 4.79
3607 3899 4.796618 GCATTGACTAATACTCCCTCCGTC 60.797 50.000 0.00 0.00 0.00 4.79
3608 3900 3.069729 GCATTGACTAATACTCCCTCCGT 59.930 47.826 0.00 0.00 0.00 4.69
3609 3901 3.322254 AGCATTGACTAATACTCCCTCCG 59.678 47.826 0.00 0.00 0.00 4.63
3610 3902 4.965200 AGCATTGACTAATACTCCCTCC 57.035 45.455 0.00 0.00 0.00 4.30
3635 3927 7.545265 TGCAAGGCATATTTTGATTACTCAAAC 59.455 33.333 7.68 0.00 41.13 2.93
3701 3993 8.294341 TGTTTCTTCAGTTATCAAGTCTTACG 57.706 34.615 0.00 0.00 0.00 3.18
4003 4300 0.611062 GGGCCTACCTTTCCAACCAC 60.611 60.000 0.84 0.00 35.85 4.16
4094 4391 3.094572 GGGTTGCACTCTACTACCAGTA 58.905 50.000 4.00 0.00 0.00 2.74
4223 4521 2.627515 ACTGTCATCATTGGGGATCG 57.372 50.000 0.00 0.00 0.00 3.69
4246 4544 3.440173 AGCCAATTTCTACAACACCATCG 59.560 43.478 0.00 0.00 0.00 3.84
4251 4549 4.829064 TGTGAGCCAATTTCTACAACAC 57.171 40.909 0.00 0.00 0.00 3.32
4320 4619 5.165676 CCAGATGTGTACTGCGTAGTAAAA 58.834 41.667 15.26 4.18 40.89 1.52
4359 4658 2.282745 GCAAGCCCTGCCTTCTGT 60.283 61.111 0.00 0.00 46.13 3.41
4414 4713 2.340337 GAATGCTTTGACCATGGTTGC 58.660 47.619 20.85 19.92 0.00 4.17
4461 4760 1.351017 CCTGGCAGTTCCCTGAAACTA 59.649 52.381 14.43 0.00 41.50 2.24
4519 4818 2.099263 ACATAGTCGCAACTAGCATCGT 59.901 45.455 0.00 0.00 46.13 3.73
4523 4822 2.230266 TGTCACATAGTCGCAACTAGCA 59.770 45.455 0.00 0.00 46.13 3.49
4529 4828 8.956426 TGATATAGATATGTCACATAGTCGCAA 58.044 33.333 3.38 0.00 30.34 4.85
4603 4902 2.873472 CGTAGTAGGAGCTGAAGTCGAT 59.127 50.000 0.00 0.00 0.00 3.59
4626 4925 2.615747 GCCAAAACCCTCTACCTCAGAC 60.616 54.545 0.00 0.00 0.00 3.51
4629 4928 1.073284 GTGCCAAAACCCTCTACCTCA 59.927 52.381 0.00 0.00 0.00 3.86
4650 4949 3.710677 AGAGGGTCTCAGAATCCTTGATG 59.289 47.826 0.00 0.00 32.06 3.07
4659 4958 1.649321 ACATGCAGAGGGTCTCAGAA 58.351 50.000 0.00 0.00 32.06 3.02
4711 5010 1.061131 CGATGACACACTCGAAATGGC 59.939 52.381 1.75 0.00 37.05 4.40
4724 5023 7.201635 CCATTGATCTTGTTTATGTCGATGACA 60.202 37.037 1.65 1.65 46.90 3.58
4759 5059 7.882791 TGATGCAAGAGAAAACACCTTAGATAA 59.117 33.333 0.00 0.00 0.00 1.75
4818 5118 3.769844 AGATACGAACACCCTTGTCATCT 59.230 43.478 0.00 0.00 33.55 2.90
4931 5231 2.179949 GCCTTCAGCACGCTATTTTC 57.820 50.000 0.00 0.00 42.97 2.29
5056 5358 8.092521 TGAAAAGTTTGAAACAAAGCAAATCA 57.907 26.923 11.02 1.03 36.51 2.57
5137 5439 8.713708 TTATTTCCCATCTTAGGTTGTTGAAA 57.286 30.769 0.00 0.00 0.00 2.69
5141 5443 8.893563 TCAATTATTTCCCATCTTAGGTTGTT 57.106 30.769 0.00 0.00 0.00 2.83
5267 5570 6.904543 GCACAAAACTTGCGTAAAAATTCATT 59.095 30.769 0.00 0.00 0.00 2.57
5356 5659 0.964700 TGGGATTTTCATGCGTTGCA 59.035 45.000 0.00 0.00 44.86 4.08
5660 5976 1.476845 TAGGCGTCAGCTGTTCCCAA 61.477 55.000 14.67 2.47 44.37 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.