Multiple sequence alignment - TraesCS1B01G279500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G279500 chr1B 100.000 4933 0 0 1 4933 488123836 488128768 0.000000e+00 9110.0
1 TraesCS1B01G279500 chr1B 100.000 44 0 0 2149 2192 488125725 488125768 1.140000e-11 82.4
2 TraesCS1B01G279500 chr1B 100.000 44 0 0 1890 1933 488125984 488126027 1.140000e-11 82.4
3 TraesCS1B01G279500 chr1B 97.619 42 1 0 2149 2190 488125622 488125663 6.850000e-09 73.1
4 TraesCS1B01G279500 chr1D 91.435 1728 73 34 502 2192 364722387 364724076 0.000000e+00 2302.0
5 TraesCS1B01G279500 chr1D 97.136 1292 31 1 2292 3583 364724072 364725357 0.000000e+00 2176.0
6 TraesCS1B01G279500 chr1D 90.690 1289 72 20 3631 4895 364725450 364726714 0.000000e+00 1672.0
7 TraesCS1B01G279500 chr1D 82.897 497 52 15 4408 4895 364727474 364727946 2.750000e-112 416.0
8 TraesCS1B01G279500 chr1D 82.897 497 52 16 4408 4895 364728088 364728560 2.750000e-112 416.0
9 TraesCS1B01G279500 chr1D 82.696 497 53 14 4408 4895 364726859 364727331 1.280000e-110 411.0
10 TraesCS1B01G279500 chr1D 82.696 497 53 14 4408 4895 364728701 364729173 1.280000e-110 411.0
11 TraesCS1B01G279500 chr1D 86.260 131 7 6 1859 1978 364723641 364723771 1.110000e-26 132.0
12 TraesCS1B01G279500 chr1D 93.333 90 3 2 1741 1828 364723724 364723812 4.010000e-26 130.0
13 TraesCS1B01G279500 chr1D 95.918 49 1 1 2145 2192 364723669 364723717 1.470000e-10 78.7
14 TraesCS1B01G279500 chr1D 95.455 44 0 2 2149 2190 364723769 364723812 8.860000e-08 69.4
15 TraesCS1B01G279500 chr1A 97.450 1294 25 3 2292 3583 463811764 463813051 0.000000e+00 2200.0
16 TraesCS1B01G279500 chr1A 90.408 1543 69 31 686 2192 463810269 463811768 0.000000e+00 1956.0
17 TraesCS1B01G279500 chr1A 96.186 708 23 4 3610 4314 463813041 463813747 0.000000e+00 1155.0
18 TraesCS1B01G279500 chr1A 88.514 444 40 9 4332 4768 463813804 463814243 1.220000e-145 527.0
19 TraesCS1B01G279500 chr1A 94.690 113 4 1 2187 2297 461771975 461772087 1.830000e-39 174.0
20 TraesCS1B01G279500 chr1A 90.816 98 5 3 1741 1835 463811420 463811516 1.440000e-25 128.0
21 TraesCS1B01G279500 chr1A 98.000 50 1 0 1890 1939 463811725 463811774 2.450000e-13 87.9
22 TraesCS1B01G279500 chr1A 95.652 46 0 2 2149 2192 463811465 463811510 6.850000e-09 73.1
23 TraesCS1B01G279500 chr3A 79.785 559 91 15 2925 3471 633909207 633908659 2.150000e-103 387.0
24 TraesCS1B01G279500 chr3A 94.595 111 4 1 2189 2297 746352862 746352752 2.360000e-38 171.0
25 TraesCS1B01G279500 chr3A 92.982 114 6 1 2183 2294 265545028 265545141 1.100000e-36 165.0
26 TraesCS1B01G279500 chr2D 96.296 108 3 1 2189 2295 75761234 75761127 5.080000e-40 176.0
27 TraesCS1B01G279500 chr2D 93.103 116 6 1 2189 2302 444766894 444767009 8.490000e-38 169.0
28 TraesCS1B01G279500 chr5D 95.413 109 3 2 2188 2294 313637483 313637591 6.560000e-39 172.0
29 TraesCS1B01G279500 chr5D 95.370 108 3 1 2189 2294 560242935 560243042 2.360000e-38 171.0
30 TraesCS1B01G279500 chr6A 93.805 113 4 2 2184 2294 459909973 459910084 3.050000e-37 167.0
31 TraesCS1B01G279500 chr6A 91.597 119 8 1 2179 2295 608217258 608217376 3.950000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G279500 chr1B 488123836 488128768 4932 False 2336.975000 9110 99.404750 1 4933 4 chr1B.!!$F1 4932
1 TraesCS1B01G279500 chr1D 364722387 364729173 6786 False 746.736364 2302 89.219364 502 4895 11 chr1D.!!$F1 4393
2 TraesCS1B01G279500 chr1A 463810269 463814243 3974 False 875.285714 2200 93.860857 686 4768 7 chr1A.!!$F2 4082
3 TraesCS1B01G279500 chr3A 633908659 633909207 548 True 387.000000 387 79.785000 2925 3471 1 chr3A.!!$R1 546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.103026 CTCGCCGATCCTCATGAACA 59.897 55.0 0.00 0.0 0.00 3.18 F
29 30 0.103026 TCGCCGATCCTCATGAACAG 59.897 55.0 0.00 0.0 0.00 3.16 F
35 36 0.107508 ATCCTCATGAACAGTGGCCG 60.108 55.0 0.00 0.0 0.00 6.13 F
407 408 0.109781 CACGCGTGCCAGCTAAAAAT 60.110 50.0 28.16 0.0 34.40 1.82 F
446 447 0.253327 TTGGCCCAAACACCAAAACC 59.747 50.0 0.00 0.0 42.87 3.27 F
956 976 0.327191 CCCTCCCCAAACCCTAGCTA 60.327 60.0 0.00 0.0 0.00 3.32 F
1523 1559 0.511221 CCACGAGCGTTGAAATCGTT 59.489 50.0 0.00 0.0 46.76 3.85 F
1694 1732 0.594796 CACGCACAAGACAAAAGGGC 60.595 55.0 0.00 0.0 0.00 5.19 F
3584 3650 0.239347 GCATCGCTGTGCTGTTCTTT 59.761 50.0 3.25 0.0 41.82 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1856 1906 0.032815 GAGCTCCCTGAGTATTCGGC 59.967 60.000 0.87 0.0 31.39 5.54 R
1979 2037 0.877743 GCCAAGTCCAGAACAGAAGC 59.122 55.000 0.00 0.0 0.00 3.86 R
1980 2038 2.260844 TGCCAAGTCCAGAACAGAAG 57.739 50.000 0.00 0.0 0.00 2.85 R
2288 2348 3.187432 GCAGCACTCAAAAGAAGTACTCC 59.813 47.826 0.00 0.0 0.00 3.85 R
2289 2349 4.061596 AGCAGCACTCAAAAGAAGTACTC 58.938 43.478 0.00 0.0 0.00 2.59 R
2742 2802 3.726557 TTGATGCCACCTGAAGATTCT 57.273 42.857 0.00 0.0 0.00 2.40 R
2992 3052 0.762418 ACACCACAGGATCGAACCAA 59.238 50.000 14.80 0.0 0.00 3.67 R
3599 3665 0.171455 GAACAACACACACCCGCAAA 59.829 50.000 0.00 0.0 0.00 3.68 R
4897 7575 0.246635 CTTATATCACGGGGCGGAGG 59.753 60.000 0.00 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.959596 GCTGCCTCGCCGATCCTC 62.960 72.222 0.00 0.00 0.00 3.71
22 23 3.531207 CTGCCTCGCCGATCCTCA 61.531 66.667 0.00 0.00 0.00 3.86
23 24 2.839632 TGCCTCGCCGATCCTCAT 60.840 61.111 0.00 0.00 0.00 2.90
24 25 2.356793 GCCTCGCCGATCCTCATG 60.357 66.667 0.00 0.00 0.00 3.07
25 26 2.861101 GCCTCGCCGATCCTCATGA 61.861 63.158 0.00 0.00 0.00 3.07
26 27 1.742146 CCTCGCCGATCCTCATGAA 59.258 57.895 0.00 0.00 0.00 2.57
27 28 0.598680 CCTCGCCGATCCTCATGAAC 60.599 60.000 0.00 0.00 0.00 3.18
28 29 0.103026 CTCGCCGATCCTCATGAACA 59.897 55.000 0.00 0.00 0.00 3.18
29 30 0.103026 TCGCCGATCCTCATGAACAG 59.897 55.000 0.00 0.00 0.00 3.16
30 31 0.179100 CGCCGATCCTCATGAACAGT 60.179 55.000 0.00 0.00 0.00 3.55
31 32 1.293924 GCCGATCCTCATGAACAGTG 58.706 55.000 0.00 0.00 0.00 3.66
32 33 1.945387 CCGATCCTCATGAACAGTGG 58.055 55.000 0.00 0.00 0.00 4.00
33 34 1.293924 CGATCCTCATGAACAGTGGC 58.706 55.000 0.00 0.00 0.00 5.01
34 35 1.673168 GATCCTCATGAACAGTGGCC 58.327 55.000 0.00 0.00 0.00 5.36
35 36 0.107508 ATCCTCATGAACAGTGGCCG 60.108 55.000 0.00 0.00 0.00 6.13
36 37 1.003355 CCTCATGAACAGTGGCCGT 60.003 57.895 0.00 0.00 0.00 5.68
37 38 1.021390 CCTCATGAACAGTGGCCGTC 61.021 60.000 0.00 0.00 0.00 4.79
38 39 1.354337 CTCATGAACAGTGGCCGTCG 61.354 60.000 0.00 0.00 0.00 5.12
39 40 1.374125 CATGAACAGTGGCCGTCGA 60.374 57.895 0.00 0.00 0.00 4.20
40 41 1.079819 ATGAACAGTGGCCGTCGAG 60.080 57.895 0.00 0.00 0.00 4.04
41 42 1.816863 ATGAACAGTGGCCGTCGAGT 61.817 55.000 0.00 0.00 0.00 4.18
42 43 2.022129 GAACAGTGGCCGTCGAGTG 61.022 63.158 0.00 0.00 0.00 3.51
43 44 4.664677 ACAGTGGCCGTCGAGTGC 62.665 66.667 0.00 0.00 0.00 4.40
58 59 2.124529 TGCCACCGCAAAGACACA 60.125 55.556 0.00 0.00 43.74 3.72
59 60 1.528076 TGCCACCGCAAAGACACAT 60.528 52.632 0.00 0.00 43.74 3.21
60 61 1.210155 GCCACCGCAAAGACACATC 59.790 57.895 0.00 0.00 34.03 3.06
61 62 1.514678 GCCACCGCAAAGACACATCA 61.515 55.000 0.00 0.00 34.03 3.07
62 63 0.518636 CCACCGCAAAGACACATCAG 59.481 55.000 0.00 0.00 0.00 2.90
63 64 0.518636 CACCGCAAAGACACATCAGG 59.481 55.000 0.00 0.00 0.00 3.86
64 65 0.396435 ACCGCAAAGACACATCAGGA 59.604 50.000 0.00 0.00 0.00 3.86
65 66 1.081892 CCGCAAAGACACATCAGGAG 58.918 55.000 0.00 0.00 0.00 3.69
66 67 0.445436 CGCAAAGACACATCAGGAGC 59.555 55.000 0.00 0.00 0.00 4.70
67 68 1.527034 GCAAAGACACATCAGGAGCA 58.473 50.000 0.00 0.00 0.00 4.26
68 69 1.881973 GCAAAGACACATCAGGAGCAA 59.118 47.619 0.00 0.00 0.00 3.91
69 70 2.294233 GCAAAGACACATCAGGAGCAAA 59.706 45.455 0.00 0.00 0.00 3.68
70 71 3.611057 GCAAAGACACATCAGGAGCAAAG 60.611 47.826 0.00 0.00 0.00 2.77
71 72 2.486472 AGACACATCAGGAGCAAAGG 57.514 50.000 0.00 0.00 0.00 3.11
72 73 1.980765 AGACACATCAGGAGCAAAGGA 59.019 47.619 0.00 0.00 0.00 3.36
73 74 2.027377 AGACACATCAGGAGCAAAGGAG 60.027 50.000 0.00 0.00 0.00 3.69
74 75 1.004044 ACACATCAGGAGCAAAGGAGG 59.996 52.381 0.00 0.00 0.00 4.30
75 76 1.280133 CACATCAGGAGCAAAGGAGGA 59.720 52.381 0.00 0.00 0.00 3.71
76 77 1.558756 ACATCAGGAGCAAAGGAGGAG 59.441 52.381 0.00 0.00 0.00 3.69
77 78 1.558756 CATCAGGAGCAAAGGAGGAGT 59.441 52.381 0.00 0.00 0.00 3.85
78 79 1.734655 TCAGGAGCAAAGGAGGAGTT 58.265 50.000 0.00 0.00 0.00 3.01
79 80 2.057922 TCAGGAGCAAAGGAGGAGTTT 58.942 47.619 0.00 0.00 0.00 2.66
80 81 2.157738 CAGGAGCAAAGGAGGAGTTTG 58.842 52.381 0.00 0.00 37.85 2.93
81 82 1.074566 AGGAGCAAAGGAGGAGTTTGG 59.925 52.381 0.00 0.00 35.75 3.28
82 83 1.539157 GAGCAAAGGAGGAGTTTGGG 58.461 55.000 0.00 0.00 35.75 4.12
83 84 0.540597 AGCAAAGGAGGAGTTTGGGC 60.541 55.000 0.00 0.00 35.75 5.36
84 85 0.827507 GCAAAGGAGGAGTTTGGGCA 60.828 55.000 0.00 0.00 35.75 5.36
85 86 0.961753 CAAAGGAGGAGTTTGGGCAC 59.038 55.000 0.00 0.00 32.26 5.01
86 87 0.555769 AAAGGAGGAGTTTGGGCACA 59.444 50.000 0.00 0.00 0.00 4.57
87 88 0.555769 AAGGAGGAGTTTGGGCACAA 59.444 50.000 0.00 0.00 34.07 3.33
88 89 0.555769 AGGAGGAGTTTGGGCACAAA 59.444 50.000 10.84 10.84 43.91 2.83
94 95 2.647875 TTTGGGCACAAATCGCGG 59.352 55.556 10.84 0.00 41.42 6.46
95 96 3.565910 TTTGGGCACAAATCGCGGC 62.566 57.895 10.84 0.00 41.42 6.53
100 101 4.459331 CACAAATCGCGGCGGTGG 62.459 66.667 23.46 14.03 0.00 4.61
101 102 4.690719 ACAAATCGCGGCGGTGGA 62.691 61.111 23.46 2.76 0.00 4.02
102 103 3.864686 CAAATCGCGGCGGTGGAG 61.865 66.667 23.46 5.16 0.00 3.86
119 120 3.151022 GGAGCCCTCCCGTGAGAG 61.151 72.222 2.81 0.00 43.94 3.20
120 121 2.043852 GAGCCCTCCCGTGAGAGA 60.044 66.667 0.00 0.00 41.42 3.10
121 122 1.456705 GAGCCCTCCCGTGAGAGAT 60.457 63.158 0.00 0.00 41.42 2.75
122 123 0.178987 GAGCCCTCCCGTGAGAGATA 60.179 60.000 0.00 0.00 41.42 1.98
123 124 0.178975 AGCCCTCCCGTGAGAGATAG 60.179 60.000 0.00 0.00 41.42 2.08
124 125 0.178987 GCCCTCCCGTGAGAGATAGA 60.179 60.000 0.00 0.00 41.42 1.98
125 126 1.904287 CCCTCCCGTGAGAGATAGAG 58.096 60.000 0.00 0.00 41.42 2.43
126 127 1.422024 CCCTCCCGTGAGAGATAGAGA 59.578 57.143 0.00 0.00 41.42 3.10
127 128 2.552155 CCCTCCCGTGAGAGATAGAGAG 60.552 59.091 0.00 0.00 41.42 3.20
128 129 2.370519 CCTCCCGTGAGAGATAGAGAGA 59.629 54.545 0.00 0.00 41.42 3.10
129 130 3.557054 CCTCCCGTGAGAGATAGAGAGAG 60.557 56.522 0.00 0.00 41.42 3.20
130 131 3.310193 TCCCGTGAGAGATAGAGAGAGA 58.690 50.000 0.00 0.00 0.00 3.10
131 132 3.323691 TCCCGTGAGAGATAGAGAGAGAG 59.676 52.174 0.00 0.00 0.00 3.20
132 133 3.323691 CCCGTGAGAGATAGAGAGAGAGA 59.676 52.174 0.00 0.00 0.00 3.10
133 134 4.560128 CCGTGAGAGATAGAGAGAGAGAG 58.440 52.174 0.00 0.00 0.00 3.20
134 135 4.560128 CGTGAGAGATAGAGAGAGAGAGG 58.440 52.174 0.00 0.00 0.00 3.69
135 136 4.039245 CGTGAGAGATAGAGAGAGAGAGGT 59.961 50.000 0.00 0.00 0.00 3.85
136 137 5.300752 GTGAGAGATAGAGAGAGAGAGGTG 58.699 50.000 0.00 0.00 0.00 4.00
137 138 4.347876 TGAGAGATAGAGAGAGAGAGGTGG 59.652 50.000 0.00 0.00 0.00 4.61
138 139 3.652869 AGAGATAGAGAGAGAGAGGTGGG 59.347 52.174 0.00 0.00 0.00 4.61
139 140 2.716424 AGATAGAGAGAGAGAGGTGGGG 59.284 54.545 0.00 0.00 0.00 4.96
140 141 2.288598 TAGAGAGAGAGAGGTGGGGA 57.711 55.000 0.00 0.00 0.00 4.81
141 142 0.629058 AGAGAGAGAGAGGTGGGGAC 59.371 60.000 0.00 0.00 0.00 4.46
142 143 0.750182 GAGAGAGAGAGGTGGGGACG 60.750 65.000 0.00 0.00 0.00 4.79
143 144 1.208844 AGAGAGAGAGGTGGGGACGA 61.209 60.000 0.00 0.00 0.00 4.20
144 145 0.323542 GAGAGAGAGGTGGGGACGAA 60.324 60.000 0.00 0.00 0.00 3.85
145 146 0.114560 AGAGAGAGGTGGGGACGAAA 59.885 55.000 0.00 0.00 0.00 3.46
146 147 0.974383 GAGAGAGGTGGGGACGAAAA 59.026 55.000 0.00 0.00 0.00 2.29
147 148 0.685660 AGAGAGGTGGGGACGAAAAC 59.314 55.000 0.00 0.00 0.00 2.43
148 149 0.669625 GAGAGGTGGGGACGAAAACG 60.670 60.000 0.00 0.00 0.00 3.60
149 150 1.117142 AGAGGTGGGGACGAAAACGA 61.117 55.000 0.00 0.00 0.00 3.85
150 151 0.669625 GAGGTGGGGACGAAAACGAG 60.670 60.000 0.00 0.00 0.00 4.18
151 152 1.670083 GGTGGGGACGAAAACGAGG 60.670 63.158 0.00 0.00 0.00 4.63
152 153 1.670083 GTGGGGACGAAAACGAGGG 60.670 63.158 0.00 0.00 0.00 4.30
153 154 1.837947 TGGGGACGAAAACGAGGGA 60.838 57.895 0.00 0.00 0.00 4.20
154 155 1.079336 GGGGACGAAAACGAGGGAG 60.079 63.158 0.00 0.00 0.00 4.30
155 156 1.079336 GGGACGAAAACGAGGGAGG 60.079 63.158 0.00 0.00 0.00 4.30
156 157 1.538687 GGGACGAAAACGAGGGAGGA 61.539 60.000 0.00 0.00 0.00 3.71
157 158 0.319405 GGACGAAAACGAGGGAGGAA 59.681 55.000 0.00 0.00 0.00 3.36
158 159 1.672145 GGACGAAAACGAGGGAGGAAG 60.672 57.143 0.00 0.00 0.00 3.46
159 160 1.271656 GACGAAAACGAGGGAGGAAGA 59.728 52.381 0.00 0.00 0.00 2.87
160 161 1.690352 ACGAAAACGAGGGAGGAAGAA 59.310 47.619 0.00 0.00 0.00 2.52
161 162 2.103601 ACGAAAACGAGGGAGGAAGAAA 59.896 45.455 0.00 0.00 0.00 2.52
162 163 2.737252 CGAAAACGAGGGAGGAAGAAAG 59.263 50.000 0.00 0.00 0.00 2.62
163 164 3.554337 CGAAAACGAGGGAGGAAGAAAGA 60.554 47.826 0.00 0.00 0.00 2.52
164 165 3.686916 AAACGAGGGAGGAAGAAAGAG 57.313 47.619 0.00 0.00 0.00 2.85
165 166 1.562783 ACGAGGGAGGAAGAAAGAGG 58.437 55.000 0.00 0.00 0.00 3.69
166 167 1.203199 ACGAGGGAGGAAGAAAGAGGT 60.203 52.381 0.00 0.00 0.00 3.85
167 168 2.042706 ACGAGGGAGGAAGAAAGAGGTA 59.957 50.000 0.00 0.00 0.00 3.08
168 169 3.097614 CGAGGGAGGAAGAAAGAGGTAA 58.902 50.000 0.00 0.00 0.00 2.85
169 170 3.131400 CGAGGGAGGAAGAAAGAGGTAAG 59.869 52.174 0.00 0.00 0.00 2.34
170 171 3.452990 GAGGGAGGAAGAAAGAGGTAAGG 59.547 52.174 0.00 0.00 0.00 2.69
171 172 3.181394 AGGGAGGAAGAAAGAGGTAAGGT 60.181 47.826 0.00 0.00 0.00 3.50
172 173 3.587951 GGGAGGAAGAAAGAGGTAAGGTT 59.412 47.826 0.00 0.00 0.00 3.50
173 174 4.565861 GGGAGGAAGAAAGAGGTAAGGTTG 60.566 50.000 0.00 0.00 0.00 3.77
174 175 4.565861 GGAGGAAGAAAGAGGTAAGGTTGG 60.566 50.000 0.00 0.00 0.00 3.77
175 176 3.330998 AGGAAGAAAGAGGTAAGGTTGGG 59.669 47.826 0.00 0.00 0.00 4.12
176 177 2.881111 AGAAAGAGGTAAGGTTGGGC 57.119 50.000 0.00 0.00 0.00 5.36
177 178 1.354705 AGAAAGAGGTAAGGTTGGGCC 59.645 52.381 0.00 0.00 37.58 5.80
186 187 3.976758 GGTTGGGCCTACACGAAC 58.023 61.111 19.57 7.02 0.00 3.95
187 188 1.071814 GGTTGGGCCTACACGAACA 59.928 57.895 19.57 0.00 0.00 3.18
188 189 1.232621 GGTTGGGCCTACACGAACAC 61.233 60.000 19.57 0.00 0.00 3.32
189 190 1.301087 TTGGGCCTACACGAACACG 60.301 57.895 4.53 0.00 0.00 4.49
190 191 2.030490 TTGGGCCTACACGAACACGT 62.030 55.000 4.53 0.00 41.02 4.49
201 202 3.046285 ACGAACACGTGTCATGTTTTG 57.954 42.857 23.61 11.46 40.36 2.44
202 203 2.223157 ACGAACACGTGTCATGTTTTGG 60.223 45.455 23.61 8.20 40.36 3.28
203 204 2.223157 CGAACACGTGTCATGTTTTGGT 60.223 45.455 23.61 1.03 40.36 3.67
204 205 3.729462 CGAACACGTGTCATGTTTTGGTT 60.729 43.478 23.61 0.41 40.36 3.67
205 206 3.143807 ACACGTGTCATGTTTTGGTTG 57.856 42.857 17.22 0.00 0.00 3.77
206 207 2.159310 ACACGTGTCATGTTTTGGTTGG 60.159 45.455 17.22 0.00 0.00 3.77
207 208 2.096248 ACGTGTCATGTTTTGGTTGGT 58.904 42.857 0.00 0.00 0.00 3.67
208 209 2.494073 ACGTGTCATGTTTTGGTTGGTT 59.506 40.909 0.00 0.00 0.00 3.67
209 210 3.056465 ACGTGTCATGTTTTGGTTGGTTT 60.056 39.130 0.00 0.00 0.00 3.27
210 211 3.305629 CGTGTCATGTTTTGGTTGGTTTG 59.694 43.478 0.00 0.00 0.00 2.93
211 212 4.499183 GTGTCATGTTTTGGTTGGTTTGA 58.501 39.130 0.00 0.00 0.00 2.69
212 213 5.115480 GTGTCATGTTTTGGTTGGTTTGAT 58.885 37.500 0.00 0.00 0.00 2.57
213 214 6.276847 GTGTCATGTTTTGGTTGGTTTGATA 58.723 36.000 0.00 0.00 0.00 2.15
214 215 6.200097 GTGTCATGTTTTGGTTGGTTTGATAC 59.800 38.462 0.00 0.00 0.00 2.24
215 216 6.097554 TGTCATGTTTTGGTTGGTTTGATACT 59.902 34.615 0.00 0.00 0.00 2.12
216 217 7.285629 TGTCATGTTTTGGTTGGTTTGATACTA 59.714 33.333 0.00 0.00 0.00 1.82
217 218 8.138712 GTCATGTTTTGGTTGGTTTGATACTAA 58.861 33.333 0.00 0.00 0.00 2.24
218 219 8.865090 TCATGTTTTGGTTGGTTTGATACTAAT 58.135 29.630 0.00 0.00 29.39 1.73
219 220 9.487790 CATGTTTTGGTTGGTTTGATACTAATT 57.512 29.630 0.00 0.00 29.39 1.40
220 221 8.879342 TGTTTTGGTTGGTTTGATACTAATTG 57.121 30.769 0.00 0.00 29.39 2.32
221 222 7.928706 TGTTTTGGTTGGTTTGATACTAATTGG 59.071 33.333 0.00 0.00 29.39 3.16
222 223 7.604657 TTTGGTTGGTTTGATACTAATTGGT 57.395 32.000 0.00 0.00 29.39 3.67
223 224 7.604657 TTGGTTGGTTTGATACTAATTGGTT 57.395 32.000 0.00 0.00 29.39 3.67
224 225 7.604657 TGGTTGGTTTGATACTAATTGGTTT 57.395 32.000 0.00 0.00 29.39 3.27
225 226 8.707796 TGGTTGGTTTGATACTAATTGGTTTA 57.292 30.769 0.00 0.00 29.39 2.01
226 227 9.144298 TGGTTGGTTTGATACTAATTGGTTTAA 57.856 29.630 0.00 0.00 29.39 1.52
268 269 9.193806 AGCAATATGAAAGATAAACACATTCCT 57.806 29.630 0.00 0.00 0.00 3.36
269 270 9.807649 GCAATATGAAAGATAAACACATTCCTT 57.192 29.630 0.00 0.00 0.00 3.36
272 273 9.699410 ATATGAAAGATAAACACATTCCTTCCA 57.301 29.630 0.00 0.00 0.00 3.53
273 274 7.831691 TGAAAGATAAACACATTCCTTCCAA 57.168 32.000 0.00 0.00 0.00 3.53
274 275 8.243961 TGAAAGATAAACACATTCCTTCCAAA 57.756 30.769 0.00 0.00 0.00 3.28
275 276 8.700051 TGAAAGATAAACACATTCCTTCCAAAA 58.300 29.630 0.00 0.00 0.00 2.44
276 277 9.541143 GAAAGATAAACACATTCCTTCCAAAAA 57.459 29.630 0.00 0.00 0.00 1.94
363 364 6.515272 AATAATATTAAGCATTCAGGGCCG 57.485 37.500 0.00 0.00 0.00 6.13
364 365 3.788227 ATATTAAGCATTCAGGGCCGA 57.212 42.857 0.00 0.00 0.00 5.54
365 366 1.972872 ATTAAGCATTCAGGGCCGAG 58.027 50.000 0.00 0.00 0.00 4.63
366 367 0.748005 TTAAGCATTCAGGGCCGAGC 60.748 55.000 0.00 0.00 0.00 5.03
391 392 3.275143 TGGCTAATCCAACAATACCACG 58.725 45.455 0.00 0.00 43.21 4.94
392 393 2.032924 GGCTAATCCAACAATACCACGC 59.967 50.000 0.00 0.00 34.01 5.34
393 394 2.286184 GCTAATCCAACAATACCACGCG 60.286 50.000 3.53 3.53 0.00 6.01
394 395 1.816074 AATCCAACAATACCACGCGT 58.184 45.000 5.58 5.58 0.00 6.01
395 396 1.083489 ATCCAACAATACCACGCGTG 58.917 50.000 31.77 31.77 0.00 5.34
396 397 1.154301 CCAACAATACCACGCGTGC 60.154 57.895 33.17 0.00 0.00 5.34
397 398 1.154301 CAACAATACCACGCGTGCC 60.154 57.895 33.17 0.00 0.00 5.01
398 399 1.598407 AACAATACCACGCGTGCCA 60.598 52.632 33.17 22.17 0.00 4.92
399 400 1.573829 AACAATACCACGCGTGCCAG 61.574 55.000 33.17 21.80 0.00 4.85
400 401 3.124921 AATACCACGCGTGCCAGC 61.125 61.111 33.17 0.00 0.00 4.85
401 402 3.605749 AATACCACGCGTGCCAGCT 62.606 57.895 33.17 13.02 34.40 4.24
402 403 2.233605 AATACCACGCGTGCCAGCTA 62.234 55.000 33.17 15.77 34.40 3.32
403 404 2.233605 ATACCACGCGTGCCAGCTAA 62.234 55.000 33.17 12.50 34.40 3.09
404 405 2.437518 TACCACGCGTGCCAGCTAAA 62.438 55.000 33.17 8.64 34.40 1.85
405 406 2.612567 CCACGCGTGCCAGCTAAAA 61.613 57.895 33.17 0.00 34.40 1.52
406 407 1.281353 CACGCGTGCCAGCTAAAAA 59.719 52.632 28.16 0.00 34.40 1.94
407 408 0.109781 CACGCGTGCCAGCTAAAAAT 60.110 50.000 28.16 0.00 34.40 1.82
408 409 1.129624 CACGCGTGCCAGCTAAAAATA 59.870 47.619 28.16 0.00 34.40 1.40
409 410 1.129811 ACGCGTGCCAGCTAAAAATAC 59.870 47.619 12.93 0.00 34.40 1.89
410 411 1.810197 GCGTGCCAGCTAAAAATACG 58.190 50.000 0.00 0.00 0.00 3.06
411 412 1.531058 GCGTGCCAGCTAAAAATACGG 60.531 52.381 0.00 0.00 0.00 4.02
412 413 1.063469 CGTGCCAGCTAAAAATACGGG 59.937 52.381 0.00 0.00 0.00 5.28
413 414 1.099689 TGCCAGCTAAAAATACGGGC 58.900 50.000 0.00 0.00 43.85 6.13
414 415 0.384309 GCCAGCTAAAAATACGGGCC 59.616 55.000 0.00 0.00 38.53 5.80
415 416 2.022238 GCCAGCTAAAAATACGGGCCT 61.022 52.381 0.84 0.00 38.53 5.19
416 417 2.747135 GCCAGCTAAAAATACGGGCCTA 60.747 50.000 0.84 0.00 38.53 3.93
417 418 3.751518 CCAGCTAAAAATACGGGCCTAT 58.248 45.455 0.84 0.00 0.00 2.57
418 419 4.142038 CCAGCTAAAAATACGGGCCTATT 58.858 43.478 0.84 2.19 0.00 1.73
419 420 4.583073 CCAGCTAAAAATACGGGCCTATTT 59.417 41.667 0.84 8.39 0.00 1.40
420 421 5.766174 CCAGCTAAAAATACGGGCCTATTTA 59.234 40.000 16.29 8.00 0.00 1.40
421 422 6.433093 CCAGCTAAAAATACGGGCCTATTTAT 59.567 38.462 16.29 8.28 0.00 1.40
422 423 7.039993 CCAGCTAAAAATACGGGCCTATTTATT 60.040 37.037 16.29 14.60 0.00 1.40
423 424 7.807907 CAGCTAAAAATACGGGCCTATTTATTG 59.192 37.037 16.29 11.84 0.00 1.90
424 425 7.039993 AGCTAAAAATACGGGCCTATTTATTGG 60.040 37.037 16.29 14.73 0.00 3.16
425 426 6.413783 AAAAATACGGGCCTATTTATTGGG 57.586 37.500 16.29 0.00 0.00 4.12
426 427 4.734843 AATACGGGCCTATTTATTGGGT 57.265 40.909 0.84 0.00 0.00 4.51
427 428 4.734843 ATACGGGCCTATTTATTGGGTT 57.265 40.909 0.84 0.00 0.00 4.11
428 429 3.391799 ACGGGCCTATTTATTGGGTTT 57.608 42.857 0.84 0.00 0.00 3.27
429 430 3.028130 ACGGGCCTATTTATTGGGTTTG 58.972 45.455 0.84 0.00 0.00 2.93
430 431 2.364002 CGGGCCTATTTATTGGGTTTGG 59.636 50.000 0.84 0.00 0.00 3.28
431 432 2.104111 GGGCCTATTTATTGGGTTTGGC 59.896 50.000 0.84 0.00 38.49 4.52
432 433 3.469008 GCCTATTTATTGGGTTTGGCC 57.531 47.619 0.00 0.00 33.66 5.36
445 446 3.863407 TTGGCCCAAACACCAAAAC 57.137 47.368 0.00 0.00 42.87 2.43
446 447 0.253327 TTGGCCCAAACACCAAAACC 59.747 50.000 0.00 0.00 42.87 3.27
447 448 0.909610 TGGCCCAAACACCAAAACCA 60.910 50.000 0.00 0.00 31.46 3.67
448 449 0.462937 GGCCCAAACACCAAAACCAC 60.463 55.000 0.00 0.00 0.00 4.16
449 450 0.539518 GCCCAAACACCAAAACCACT 59.460 50.000 0.00 0.00 0.00 4.00
450 451 1.757699 GCCCAAACACCAAAACCACTA 59.242 47.619 0.00 0.00 0.00 2.74
451 452 2.168728 GCCCAAACACCAAAACCACTAA 59.831 45.455 0.00 0.00 0.00 2.24
452 453 3.787785 CCCAAACACCAAAACCACTAAC 58.212 45.455 0.00 0.00 0.00 2.34
453 454 3.449377 CCCAAACACCAAAACCACTAACT 59.551 43.478 0.00 0.00 0.00 2.24
454 455 4.440940 CCCAAACACCAAAACCACTAACTC 60.441 45.833 0.00 0.00 0.00 3.01
455 456 4.347813 CAAACACCAAAACCACTAACTCG 58.652 43.478 0.00 0.00 0.00 4.18
456 457 3.547054 ACACCAAAACCACTAACTCGA 57.453 42.857 0.00 0.00 0.00 4.04
457 458 3.200483 ACACCAAAACCACTAACTCGAC 58.800 45.455 0.00 0.00 0.00 4.20
458 459 2.220133 CACCAAAACCACTAACTCGACG 59.780 50.000 0.00 0.00 0.00 5.12
459 460 1.796459 CCAAAACCACTAACTCGACGG 59.204 52.381 0.00 0.00 0.00 4.79
460 461 2.546373 CCAAAACCACTAACTCGACGGA 60.546 50.000 0.00 0.00 0.00 4.69
461 462 3.125316 CAAAACCACTAACTCGACGGAA 58.875 45.455 0.00 0.00 0.00 4.30
462 463 2.719426 AACCACTAACTCGACGGAAG 57.281 50.000 0.00 0.00 0.00 3.46
463 464 1.901591 ACCACTAACTCGACGGAAGA 58.098 50.000 0.00 0.00 0.00 2.87
464 465 2.233271 ACCACTAACTCGACGGAAGAA 58.767 47.619 0.00 0.00 0.00 2.52
465 466 2.624838 ACCACTAACTCGACGGAAGAAA 59.375 45.455 0.00 0.00 0.00 2.52
466 467 3.257624 ACCACTAACTCGACGGAAGAAAT 59.742 43.478 0.00 0.00 0.00 2.17
467 468 3.612860 CCACTAACTCGACGGAAGAAATG 59.387 47.826 0.00 0.00 0.00 2.32
468 469 4.235360 CACTAACTCGACGGAAGAAATGT 58.765 43.478 0.00 0.00 0.00 2.71
469 470 4.684703 CACTAACTCGACGGAAGAAATGTT 59.315 41.667 0.00 0.00 0.00 2.71
470 471 5.860182 CACTAACTCGACGGAAGAAATGTTA 59.140 40.000 0.00 0.00 0.00 2.41
471 472 6.530534 CACTAACTCGACGGAAGAAATGTTAT 59.469 38.462 0.00 0.00 0.00 1.89
472 473 7.063074 CACTAACTCGACGGAAGAAATGTTATT 59.937 37.037 0.00 0.00 0.00 1.40
473 474 6.796705 AACTCGACGGAAGAAATGTTATTT 57.203 33.333 0.00 0.00 0.00 1.40
474 475 6.796705 ACTCGACGGAAGAAATGTTATTTT 57.203 33.333 0.00 0.00 0.00 1.82
475 476 7.198306 ACTCGACGGAAGAAATGTTATTTTT 57.802 32.000 0.00 0.00 0.00 1.94
498 499 5.833406 TTTTTGAGATTTCAGTGTGCTCA 57.167 34.783 0.00 0.00 34.15 4.26
499 500 5.428496 TTTTGAGATTTCAGTGTGCTCAG 57.572 39.130 0.00 0.00 36.99 3.35
500 501 4.341366 TTGAGATTTCAGTGTGCTCAGA 57.659 40.909 0.00 0.00 36.99 3.27
501 502 3.922910 TGAGATTTCAGTGTGCTCAGAG 58.077 45.455 0.00 0.00 32.36 3.35
502 503 2.672381 GAGATTTCAGTGTGCTCAGAGC 59.328 50.000 16.21 16.21 42.82 4.09
503 504 2.302445 AGATTTCAGTGTGCTCAGAGCT 59.698 45.455 23.15 0.00 42.97 4.09
504 505 2.160822 TTTCAGTGTGCTCAGAGCTC 57.839 50.000 23.15 19.57 42.97 4.09
505 506 1.043022 TTCAGTGTGCTCAGAGCTCA 58.957 50.000 23.15 21.95 42.97 4.26
506 507 1.043022 TCAGTGTGCTCAGAGCTCAA 58.957 50.000 25.16 10.39 44.89 3.02
584 596 8.510243 AAAAGGTTGAAAGCTCAAAATTCAAT 57.490 26.923 12.37 0.00 43.18 2.57
585 597 7.719778 AAGGTTGAAAGCTCAAAATTCAATC 57.280 32.000 12.37 11.93 43.18 2.67
586 598 6.819284 AGGTTGAAAGCTCAAAATTCAATCA 58.181 32.000 18.60 0.00 43.38 2.57
587 599 7.274447 AGGTTGAAAGCTCAAAATTCAATCAA 58.726 30.769 18.60 2.64 43.38 2.57
588 600 7.769970 AGGTTGAAAGCTCAAAATTCAATCAAA 59.230 29.630 18.60 0.00 43.38 2.69
589 601 8.562052 GGTTGAAAGCTCAAAATTCAATCAAAT 58.438 29.630 13.70 0.00 43.18 2.32
590 602 9.940166 GTTGAAAGCTCAAAATTCAATCAAATT 57.060 25.926 12.37 0.00 43.18 1.82
597 609 8.846607 GCTCAAAATTCAATCAAATTCAAATGC 58.153 29.630 0.00 0.00 0.00 3.56
598 610 9.885934 CTCAAAATTCAATCAAATTCAAATGCA 57.114 25.926 0.00 0.00 0.00 3.96
600 612 8.623180 CAAAATTCAATCAAATTCAAATGCACG 58.377 29.630 0.00 0.00 0.00 5.34
601 613 7.424227 AATTCAATCAAATTCAAATGCACGT 57.576 28.000 0.00 0.00 0.00 4.49
604 616 3.617540 TCAAATTCAAATGCACGTCGT 57.382 38.095 0.00 0.00 0.00 4.34
605 617 3.295785 TCAAATTCAAATGCACGTCGTG 58.704 40.909 21.02 21.02 36.51 4.35
676 691 1.308998 CTGAAAAAGCCCGTGAGTGT 58.691 50.000 0.00 0.00 0.00 3.55
753 771 2.202466 CACATTCCGCGCGCAAAT 60.202 55.556 32.61 25.26 0.00 2.32
955 975 1.619669 CCCTCCCCAAACCCTAGCT 60.620 63.158 0.00 0.00 0.00 3.32
956 976 0.327191 CCCTCCCCAAACCCTAGCTA 60.327 60.000 0.00 0.00 0.00 3.32
961 981 1.146263 CCAAACCCTAGCTAGCCCG 59.854 63.158 15.74 7.15 0.00 6.13
963 983 2.743179 AAACCCTAGCTAGCCCGCC 61.743 63.158 15.74 0.00 0.00 6.13
1084 1114 3.474570 CCTTCCTGCTCCCCTCCG 61.475 72.222 0.00 0.00 0.00 4.63
1417 1453 3.034635 CAGCTCTACAGGGATAAGGTGT 58.965 50.000 0.00 0.00 32.34 4.16
1453 1489 5.052693 TGGATTGCTGGAAATGCTACTAT 57.947 39.130 0.00 0.00 0.00 2.12
1509 1545 5.209818 AGAACACAAACTCTTATCCACGA 57.790 39.130 0.00 0.00 0.00 4.35
1510 1546 5.230942 AGAACACAAACTCTTATCCACGAG 58.769 41.667 0.00 0.00 0.00 4.18
1511 1547 3.326747 ACACAAACTCTTATCCACGAGC 58.673 45.455 0.00 0.00 0.00 5.03
1512 1548 2.345641 CACAAACTCTTATCCACGAGCG 59.654 50.000 0.00 0.00 0.00 5.03
1513 1549 2.029290 ACAAACTCTTATCCACGAGCGT 60.029 45.455 0.00 0.00 0.00 5.07
1514 1550 2.993899 CAAACTCTTATCCACGAGCGTT 59.006 45.455 0.00 0.00 0.00 4.84
1515 1551 2.279582 ACTCTTATCCACGAGCGTTG 57.720 50.000 0.00 0.00 0.00 4.10
1517 1553 2.230508 ACTCTTATCCACGAGCGTTGAA 59.769 45.455 0.90 0.00 0.00 2.69
1518 1554 3.250744 CTCTTATCCACGAGCGTTGAAA 58.749 45.455 0.90 0.00 0.00 2.69
1520 1556 3.863424 TCTTATCCACGAGCGTTGAAATC 59.137 43.478 0.90 0.00 0.00 2.17
1521 1557 0.999406 ATCCACGAGCGTTGAAATCG 59.001 50.000 0.90 0.00 42.04 3.34
1523 1559 0.511221 CCACGAGCGTTGAAATCGTT 59.489 50.000 0.00 0.00 46.76 3.85
1524 1560 1.722464 CCACGAGCGTTGAAATCGTTA 59.278 47.619 0.00 0.00 46.76 3.18
1525 1561 2.471749 CCACGAGCGTTGAAATCGTTAC 60.472 50.000 0.00 0.00 46.76 2.50
1526 1562 2.407361 CACGAGCGTTGAAATCGTTACT 59.593 45.455 0.00 0.00 46.76 2.24
1527 1563 2.660236 ACGAGCGTTGAAATCGTTACTC 59.340 45.455 0.00 0.00 46.76 2.59
1528 1564 2.659757 CGAGCGTTGAAATCGTTACTCA 59.340 45.455 0.00 0.00 0.00 3.41
1529 1565 3.120616 CGAGCGTTGAAATCGTTACTCAA 59.879 43.478 0.00 0.00 0.00 3.02
1530 1566 4.629065 GAGCGTTGAAATCGTTACTCAAG 58.371 43.478 0.00 0.00 30.00 3.02
1531 1567 3.120649 AGCGTTGAAATCGTTACTCAAGC 60.121 43.478 0.00 0.00 30.00 4.01
1532 1568 3.363575 GCGTTGAAATCGTTACTCAAGCA 60.364 43.478 0.00 0.00 30.00 3.91
1533 1569 4.386230 CGTTGAAATCGTTACTCAAGCAG 58.614 43.478 0.00 0.00 30.00 4.24
1534 1570 4.084537 CGTTGAAATCGTTACTCAAGCAGT 60.085 41.667 0.00 0.00 39.41 4.40
1535 1571 5.118050 CGTTGAAATCGTTACTCAAGCAGTA 59.882 40.000 0.00 0.00 36.43 2.74
1536 1572 6.297353 GTTGAAATCGTTACTCAAGCAGTAC 58.703 40.000 0.00 0.00 37.32 2.73
1537 1573 4.927425 TGAAATCGTTACTCAAGCAGTACC 59.073 41.667 0.00 0.00 37.32 3.34
1540 1576 4.691860 TCGTTACTCAAGCAGTACCTAC 57.308 45.455 0.00 0.00 37.32 3.18
1694 1732 0.594796 CACGCACAAGACAAAAGGGC 60.595 55.000 0.00 0.00 0.00 5.19
1699 1737 0.751643 ACAAGACAAAAGGGCGCACT 60.752 50.000 6.19 6.19 0.00 4.40
1724 1769 5.063817 GCATGAAAATAGTGCCATTTGAACC 59.936 40.000 0.00 0.00 32.88 3.62
1730 1775 5.649782 ATAGTGCCATTTGAACCTTTGAG 57.350 39.130 0.00 0.00 0.00 3.02
1778 1825 2.836636 TACTCAGGGAGCTCTGATGT 57.163 50.000 14.64 11.99 42.19 3.06
1814 1863 3.818210 TGTTGTGTTGGCTACATTGTAGG 59.182 43.478 22.11 7.27 39.39 3.18
1850 1900 4.959596 TCTTTTGAGCTCATGAGATTGC 57.040 40.909 27.04 11.77 0.00 3.56
1851 1901 3.373130 TCTTTTGAGCTCATGAGATTGCG 59.627 43.478 27.04 8.38 0.00 4.85
1852 1902 2.678471 TTGAGCTCATGAGATTGCGA 57.322 45.000 27.04 6.20 0.00 5.10
1853 1903 2.678471 TGAGCTCATGAGATTGCGAA 57.322 45.000 27.04 2.81 0.00 4.70
1854 1904 3.189618 TGAGCTCATGAGATTGCGAAT 57.810 42.857 27.04 0.75 0.00 3.34
1855 1905 4.326504 TGAGCTCATGAGATTGCGAATA 57.673 40.909 27.04 0.00 0.00 1.75
1856 1906 4.304939 TGAGCTCATGAGATTGCGAATAG 58.695 43.478 27.04 0.00 0.00 1.73
1959 2017 5.450818 TTTGCCTTGTAATACTCAGGGAT 57.549 39.130 10.06 0.00 34.59 3.85
1999 2057 1.815408 GCTTCTGTTCTGGACTTGGCA 60.815 52.381 0.00 0.00 0.00 4.92
2014 2072 5.418840 GGACTTGGCATCCAGAAAATCTAAA 59.581 40.000 2.21 0.00 36.15 1.85
2050 2108 3.555547 TGTCACATGTTCTTGTGTTCTCG 59.444 43.478 15.05 0.00 45.73 4.04
2102 2160 4.040461 TCTGGGAGAGACGTTTGAATTCTT 59.960 41.667 7.05 0.00 0.00 2.52
2123 2181 6.053005 TCTTAAGTGGTGTGGAAGTTAACAG 58.947 40.000 8.61 0.00 0.00 3.16
2197 2257 9.305555 TGTAGTGTAATATTATGTACTCCCTCC 57.694 37.037 11.11 0.00 0.00 4.30
2198 2258 9.305555 GTAGTGTAATATTATGTACTCCCTCCA 57.694 37.037 11.11 0.00 0.00 3.86
2199 2259 8.974292 AGTGTAATATTATGTACTCCCTCCAT 57.026 34.615 0.00 0.00 0.00 3.41
2200 2260 9.393786 AGTGTAATATTATGTACTCCCTCCATT 57.606 33.333 0.00 0.00 0.00 3.16
2201 2261 9.654663 GTGTAATATTATGTACTCCCTCCATTC 57.345 37.037 0.00 0.00 0.00 2.67
2202 2262 9.387397 TGTAATATTATGTACTCCCTCCATTCA 57.613 33.333 0.00 0.00 0.00 2.57
2203 2263 9.654663 GTAATATTATGTACTCCCTCCATTCAC 57.345 37.037 0.00 0.00 0.00 3.18
2204 2264 8.511748 AATATTATGTACTCCCTCCATTCACT 57.488 34.615 0.00 0.00 0.00 3.41
2205 2265 6.831664 ATTATGTACTCCCTCCATTCACTT 57.168 37.500 0.00 0.00 0.00 3.16
2206 2266 6.636454 TTATGTACTCCCTCCATTCACTTT 57.364 37.500 0.00 0.00 0.00 2.66
2207 2267 4.993705 TGTACTCCCTCCATTCACTTTT 57.006 40.909 0.00 0.00 0.00 2.27
2208 2268 6.636454 ATGTACTCCCTCCATTCACTTTTA 57.364 37.500 0.00 0.00 0.00 1.52
2209 2269 6.636454 TGTACTCCCTCCATTCACTTTTAT 57.364 37.500 0.00 0.00 0.00 1.40
2210 2270 7.743116 TGTACTCCCTCCATTCACTTTTATA 57.257 36.000 0.00 0.00 0.00 0.98
2211 2271 8.153221 TGTACTCCCTCCATTCACTTTTATAA 57.847 34.615 0.00 0.00 0.00 0.98
2212 2272 8.265055 TGTACTCCCTCCATTCACTTTTATAAG 58.735 37.037 0.00 0.00 37.40 1.73
2213 2273 7.272144 ACTCCCTCCATTCACTTTTATAAGT 57.728 36.000 0.00 0.00 45.40 2.24
2214 2274 7.339482 ACTCCCTCCATTCACTTTTATAAGTC 58.661 38.462 0.00 0.00 42.67 3.01
2215 2275 6.346096 TCCCTCCATTCACTTTTATAAGTCG 58.654 40.000 0.00 0.00 42.67 4.18
2216 2276 6.070424 TCCCTCCATTCACTTTTATAAGTCGT 60.070 38.462 0.00 0.00 42.67 4.34
2217 2277 6.598064 CCCTCCATTCACTTTTATAAGTCGTT 59.402 38.462 0.00 0.00 42.67 3.85
2218 2278 7.120726 CCCTCCATTCACTTTTATAAGTCGTTT 59.879 37.037 0.00 0.00 42.67 3.60
2219 2279 8.175716 CCTCCATTCACTTTTATAAGTCGTTTC 58.824 37.037 0.00 0.00 42.67 2.78
2220 2280 8.610248 TCCATTCACTTTTATAAGTCGTTTCA 57.390 30.769 0.00 0.00 42.67 2.69
2221 2281 8.717821 TCCATTCACTTTTATAAGTCGTTTCAG 58.282 33.333 0.00 0.00 42.67 3.02
2222 2282 8.717821 CCATTCACTTTTATAAGTCGTTTCAGA 58.282 33.333 0.00 0.00 42.67 3.27
2223 2283 9.530129 CATTCACTTTTATAAGTCGTTTCAGAC 57.470 33.333 0.00 0.00 42.67 3.51
2224 2284 8.651391 TTCACTTTTATAAGTCGTTTCAGACA 57.349 30.769 0.00 0.00 42.67 3.41
2225 2285 8.651391 TCACTTTTATAAGTCGTTTCAGACAA 57.349 30.769 0.00 0.00 42.67 3.18
2226 2286 8.761497 TCACTTTTATAAGTCGTTTCAGACAAG 58.239 33.333 0.00 0.00 42.67 3.16
2227 2287 8.548721 CACTTTTATAAGTCGTTTCAGACAAGT 58.451 33.333 0.00 0.00 42.67 3.16
2228 2288 8.548721 ACTTTTATAAGTCGTTTCAGACAAGTG 58.451 33.333 0.00 0.00 40.60 3.16
2229 2289 8.651391 TTTTATAAGTCGTTTCAGACAAGTGA 57.349 30.769 0.00 0.00 43.24 3.41
2230 2290 8.651391 TTTATAAGTCGTTTCAGACAAGTGAA 57.349 30.769 0.00 0.00 43.24 3.18
2231 2291 8.651391 TTATAAGTCGTTTCAGACAAGTGAAA 57.349 30.769 0.00 0.00 42.79 2.69
2232 2292 7.730364 ATAAGTCGTTTCAGACAAGTGAAAT 57.270 32.000 2.59 0.00 45.71 2.17
2233 2293 6.436843 AAGTCGTTTCAGACAAGTGAAATT 57.563 33.333 2.59 0.00 45.71 1.82
2234 2294 5.810525 AGTCGTTTCAGACAAGTGAAATTG 58.189 37.500 2.59 0.24 45.71 2.32
2235 2295 5.584649 AGTCGTTTCAGACAAGTGAAATTGA 59.415 36.000 2.59 2.32 45.71 2.57
2236 2296 5.904080 GTCGTTTCAGACAAGTGAAATTGAG 59.096 40.000 2.59 0.00 45.71 3.02
2237 2297 4.672413 CGTTTCAGACAAGTGAAATTGAGC 59.328 41.667 2.59 0.00 45.71 4.26
2238 2298 5.504665 CGTTTCAGACAAGTGAAATTGAGCT 60.505 40.000 2.59 0.00 45.71 4.09
2239 2299 6.292865 CGTTTCAGACAAGTGAAATTGAGCTA 60.293 38.462 2.59 0.00 45.71 3.32
2240 2300 7.571983 CGTTTCAGACAAGTGAAATTGAGCTAT 60.572 37.037 2.59 0.00 45.71 2.97
2241 2301 7.750229 TTCAGACAAGTGAAATTGAGCTATT 57.250 32.000 0.00 0.00 33.41 1.73
2242 2302 7.750229 TCAGACAAGTGAAATTGAGCTATTT 57.250 32.000 0.00 0.00 34.20 1.40
2243 2303 8.169977 TCAGACAAGTGAAATTGAGCTATTTT 57.830 30.769 0.00 0.00 34.20 1.82
2244 2304 9.283768 TCAGACAAGTGAAATTGAGCTATTTTA 57.716 29.630 0.00 0.00 34.20 1.52
2245 2305 9.334693 CAGACAAGTGAAATTGAGCTATTTTAC 57.665 33.333 8.21 8.21 35.43 2.01
2246 2306 9.066892 AGACAAGTGAAATTGAGCTATTTTACA 57.933 29.630 15.38 1.21 36.81 2.41
2247 2307 9.334693 GACAAGTGAAATTGAGCTATTTTACAG 57.665 33.333 15.38 11.09 36.81 2.74
2248 2308 8.850156 ACAAGTGAAATTGAGCTATTTTACAGT 58.150 29.630 15.38 11.53 36.81 3.55
2249 2309 9.121517 CAAGTGAAATTGAGCTATTTTACAGTG 57.878 33.333 15.38 10.58 36.81 3.66
2250 2310 8.396272 AGTGAAATTGAGCTATTTTACAGTGT 57.604 30.769 15.38 0.00 36.81 3.55
2251 2311 8.507249 AGTGAAATTGAGCTATTTTACAGTGTC 58.493 33.333 15.38 0.00 36.81 3.67
2252 2312 8.507249 GTGAAATTGAGCTATTTTACAGTGTCT 58.493 33.333 0.00 0.00 35.35 3.41
2253 2313 8.506437 TGAAATTGAGCTATTTTACAGTGTCTG 58.494 33.333 0.00 0.00 37.52 3.51
2254 2314 8.621532 AAATTGAGCTATTTTACAGTGTCTGA 57.378 30.769 0.00 0.00 35.18 3.27
2255 2315 8.621532 AATTGAGCTATTTTACAGTGTCTGAA 57.378 30.769 0.00 0.00 35.18 3.02
2256 2316 8.621532 ATTGAGCTATTTTACAGTGTCTGAAA 57.378 30.769 0.00 0.26 35.18 2.69
2257 2317 7.421530 TGAGCTATTTTACAGTGTCTGAAAC 57.578 36.000 0.00 0.00 35.18 2.78
2258 2318 6.989759 TGAGCTATTTTACAGTGTCTGAAACA 59.010 34.615 0.00 0.00 35.18 2.83
2259 2319 7.661437 TGAGCTATTTTACAGTGTCTGAAACAT 59.339 33.333 0.00 0.00 40.80 2.71
2260 2320 8.034058 AGCTATTTTACAGTGTCTGAAACATC 57.966 34.615 0.00 0.00 40.80 3.06
2261 2321 7.880195 AGCTATTTTACAGTGTCTGAAACATCT 59.120 33.333 0.00 0.00 40.80 2.90
2262 2322 9.151471 GCTATTTTACAGTGTCTGAAACATCTA 57.849 33.333 0.00 0.00 40.80 1.98
2264 2324 8.902540 ATTTTACAGTGTCTGAAACATCTACA 57.097 30.769 0.00 0.00 40.80 2.74
2265 2325 8.725405 TTTTACAGTGTCTGAAACATCTACAA 57.275 30.769 0.00 0.00 40.80 2.41
2266 2326 8.725405 TTTACAGTGTCTGAAACATCTACAAA 57.275 30.769 0.00 0.00 40.80 2.83
2267 2327 6.851222 ACAGTGTCTGAAACATCTACAAAG 57.149 37.500 0.02 0.00 40.80 2.77
2268 2328 5.237344 ACAGTGTCTGAAACATCTACAAAGC 59.763 40.000 0.02 0.00 40.80 3.51
2269 2329 4.757149 AGTGTCTGAAACATCTACAAAGCC 59.243 41.667 0.02 0.00 40.80 4.35
2270 2330 4.757149 GTGTCTGAAACATCTACAAAGCCT 59.243 41.667 0.00 0.00 40.80 4.58
2271 2331 5.239525 GTGTCTGAAACATCTACAAAGCCTT 59.760 40.000 0.00 0.00 40.80 4.35
2272 2332 6.426937 GTGTCTGAAACATCTACAAAGCCTTA 59.573 38.462 0.00 0.00 40.80 2.69
2273 2333 7.119846 GTGTCTGAAACATCTACAAAGCCTTAT 59.880 37.037 0.00 0.00 40.80 1.73
2274 2334 8.318412 TGTCTGAAACATCTACAAAGCCTTATA 58.682 33.333 0.00 0.00 31.20 0.98
2275 2335 9.162764 GTCTGAAACATCTACAAAGCCTTATAA 57.837 33.333 0.00 0.00 0.00 0.98
2276 2336 9.733556 TCTGAAACATCTACAAAGCCTTATAAA 57.266 29.630 0.00 0.00 0.00 1.40
2281 2341 9.515226 AACATCTACAAAGCCTTATAAAAGTGA 57.485 29.630 0.00 0.00 0.00 3.41
2282 2342 9.515226 ACATCTACAAAGCCTTATAAAAGTGAA 57.485 29.630 0.00 0.00 0.00 3.18
2283 2343 9.774742 CATCTACAAAGCCTTATAAAAGTGAAC 57.225 33.333 0.00 0.00 0.00 3.18
2284 2344 8.911918 TCTACAAAGCCTTATAAAAGTGAACA 57.088 30.769 0.00 0.00 0.00 3.18
2285 2345 8.999431 TCTACAAAGCCTTATAAAAGTGAACAG 58.001 33.333 0.00 0.00 0.00 3.16
2286 2346 7.817418 ACAAAGCCTTATAAAAGTGAACAGA 57.183 32.000 0.00 0.00 0.00 3.41
2287 2347 7.875971 ACAAAGCCTTATAAAAGTGAACAGAG 58.124 34.615 0.00 0.00 0.00 3.35
2288 2348 7.040409 ACAAAGCCTTATAAAAGTGAACAGAGG 60.040 37.037 0.00 0.00 0.00 3.69
2289 2349 5.501156 AGCCTTATAAAAGTGAACAGAGGG 58.499 41.667 0.00 0.00 0.00 4.30
2290 2350 5.250774 AGCCTTATAAAAGTGAACAGAGGGA 59.749 40.000 0.00 0.00 0.00 4.20
2361 2421 2.354510 TGTGCAGTTCTTTGGAAAGTCG 59.645 45.455 0.00 0.00 37.31 4.18
2405 2465 0.674581 CAGAGCTCGGTTGGCATCAA 60.675 55.000 8.37 0.00 0.00 2.57
2495 2555 1.000385 CAGCTCATCTAAGCCTCCTCG 60.000 57.143 0.00 0.00 43.56 4.63
2742 2802 6.054941 TGTGACAAGAGTTATGCAAGAAAGA 58.945 36.000 0.00 0.00 0.00 2.52
2992 3052 4.148079 TGGAGATCAGCATCTACGATTCT 58.852 43.478 0.00 0.00 42.54 2.40
3549 3614 3.069300 TGCATTTTGTGTGGCTGTGTTAT 59.931 39.130 0.00 0.00 0.00 1.89
3583 3649 1.580845 GGCATCGCTGTGCTGTTCTT 61.581 55.000 9.58 0.00 44.45 2.52
3584 3650 0.239347 GCATCGCTGTGCTGTTCTTT 59.761 50.000 3.25 0.00 41.82 2.52
3585 3651 1.727213 GCATCGCTGTGCTGTTCTTTC 60.727 52.381 3.25 0.00 41.82 2.62
3586 3652 1.802960 CATCGCTGTGCTGTTCTTTCT 59.197 47.619 0.00 0.00 0.00 2.52
3587 3653 1.953559 TCGCTGTGCTGTTCTTTCTT 58.046 45.000 0.00 0.00 0.00 2.52
3588 3654 2.288666 TCGCTGTGCTGTTCTTTCTTT 58.711 42.857 0.00 0.00 0.00 2.52
3589 3655 2.682856 TCGCTGTGCTGTTCTTTCTTTT 59.317 40.909 0.00 0.00 0.00 2.27
3590 3656 3.128589 TCGCTGTGCTGTTCTTTCTTTTT 59.871 39.130 0.00 0.00 0.00 1.94
3611 3677 7.787725 TTTTTATTTATTTTTGCGGGTGTGT 57.212 28.000 0.00 0.00 0.00 3.72
3612 3678 6.771188 TTTATTTATTTTTGCGGGTGTGTG 57.229 33.333 0.00 0.00 0.00 3.82
3613 3679 3.802948 TTTATTTTTGCGGGTGTGTGT 57.197 38.095 0.00 0.00 0.00 3.72
3614 3680 3.802948 TTATTTTTGCGGGTGTGTGTT 57.197 38.095 0.00 0.00 0.00 3.32
3615 3681 1.933247 ATTTTTGCGGGTGTGTGTTG 58.067 45.000 0.00 0.00 0.00 3.33
3616 3682 0.603569 TTTTTGCGGGTGTGTGTTGT 59.396 45.000 0.00 0.00 0.00 3.32
3617 3683 0.603569 TTTTGCGGGTGTGTGTTGTT 59.396 45.000 0.00 0.00 0.00 2.83
3618 3684 0.171455 TTTGCGGGTGTGTGTTGTTC 59.829 50.000 0.00 0.00 0.00 3.18
3619 3685 0.678366 TTGCGGGTGTGTGTTGTTCT 60.678 50.000 0.00 0.00 0.00 3.01
3947 4096 1.205893 ACTTAAGGCCTCAGCTTCGAG 59.794 52.381 5.23 0.00 39.73 4.04
4039 4189 0.615827 GGCCAAGGAAAAGGAGCCAT 60.616 55.000 0.00 0.00 40.20 4.40
4217 4367 1.094073 AGCTTTGCCTGATGCTAGCG 61.094 55.000 10.77 0.00 46.31 4.26
4242 4392 4.993905 TGATGTAGAATAGTGTGTCCGTG 58.006 43.478 0.00 0.00 0.00 4.94
4323 4494 4.022849 GCCTATGTTTATCTGAACCATGGC 60.023 45.833 13.04 0.00 0.00 4.40
4403 4594 1.464023 CGTTGGCTAAATGTGCTGTCG 60.464 52.381 0.00 0.00 0.00 4.35
4599 5413 1.202770 ACCACGTTTCTTGGAGGAAGG 60.203 52.381 0.00 0.00 37.58 3.46
4608 5422 1.792757 TTGGAGGAAGGCACAGGCAT 61.793 55.000 0.00 0.00 43.71 4.40
4621 5435 4.574421 GGCACAGGCATTTTTAAACAACTT 59.426 37.500 0.00 0.00 43.71 2.66
4657 5474 5.470437 TGTGATAAACGCATGTTGACCTAAA 59.530 36.000 0.00 0.00 38.62 1.85
4681 5499 0.678395 TGCCATCCAAAAACGCACAT 59.322 45.000 0.00 0.00 0.00 3.21
4727 5562 6.371548 TGGATTTCATTGTAACAGTCACTAGC 59.628 38.462 0.00 0.00 0.00 3.42
4728 5563 6.595716 GGATTTCATTGTAACAGTCACTAGCT 59.404 38.462 0.00 0.00 0.00 3.32
4729 5564 7.201565 GGATTTCATTGTAACAGTCACTAGCTC 60.202 40.741 0.00 0.00 0.00 4.09
4732 5567 5.246203 TCATTGTAACAGTCACTAGCTCCTT 59.754 40.000 0.00 0.00 0.00 3.36
4733 5568 4.521130 TGTAACAGTCACTAGCTCCTTG 57.479 45.455 0.00 0.00 0.00 3.61
4734 5569 2.464157 AACAGTCACTAGCTCCTTGC 57.536 50.000 0.00 0.00 43.29 4.01
4743 5578 2.044551 GCTCCTTGCTCCTTGGGG 60.045 66.667 0.00 0.00 38.95 4.96
4744 5579 2.911926 GCTCCTTGCTCCTTGGGGT 61.912 63.158 0.00 0.00 38.95 4.95
4745 5580 1.562672 GCTCCTTGCTCCTTGGGGTA 61.563 60.000 0.00 0.00 38.95 3.69
4746 5581 0.991920 CTCCTTGCTCCTTGGGGTAA 59.008 55.000 0.00 0.00 0.00 2.85
4747 5582 0.991920 TCCTTGCTCCTTGGGGTAAG 59.008 55.000 9.93 9.93 36.11 2.34
4748 5583 0.681243 CCTTGCTCCTTGGGGTAAGC 60.681 60.000 11.20 2.03 34.96 3.09
4783 5618 4.204573 CGCTTGCTAAGATACGTGAACTAC 59.795 45.833 0.00 0.00 0.00 2.73
4784 5619 5.100259 GCTTGCTAAGATACGTGAACTACA 58.900 41.667 0.00 0.00 0.00 2.74
4786 5621 6.074782 GCTTGCTAAGATACGTGAACTACATC 60.075 42.308 0.00 0.00 0.00 3.06
4788 5623 7.096884 TGCTAAGATACGTGAACTACATCTT 57.903 36.000 11.16 11.16 36.53 2.40
4790 5625 6.637658 GCTAAGATACGTGAACTACATCTTCC 59.362 42.308 10.02 1.90 35.14 3.46
4791 5626 5.171147 AGATACGTGAACTACATCTTCCG 57.829 43.478 0.00 0.00 0.00 4.30
4792 5627 4.639310 AGATACGTGAACTACATCTTCCGT 59.361 41.667 0.00 0.00 32.74 4.69
4793 5628 5.819379 AGATACGTGAACTACATCTTCCGTA 59.181 40.000 0.00 0.00 34.39 4.02
4794 5629 4.088823 ACGTGAACTACATCTTCCGTAC 57.911 45.455 0.00 0.00 0.00 3.67
4795 5630 3.755378 ACGTGAACTACATCTTCCGTACT 59.245 43.478 0.00 0.00 0.00 2.73
4797 5632 5.163814 ACGTGAACTACATCTTCCGTACTAC 60.164 44.000 0.00 0.00 0.00 2.73
4800 5635 7.256286 GTGAACTACATCTTCCGTACTACAAT 58.744 38.462 0.00 0.00 0.00 2.71
4801 5636 7.758528 GTGAACTACATCTTCCGTACTACAATT 59.241 37.037 0.00 0.00 0.00 2.32
4826 6276 3.495331 TGCTAATTCTTGGGTGCTCAAA 58.505 40.909 0.00 0.00 0.00 2.69
4832 6282 4.335400 TTCTTGGGTGCTCAAATTTTCC 57.665 40.909 0.00 0.00 0.00 3.13
4833 6283 2.295909 TCTTGGGTGCTCAAATTTTCCG 59.704 45.455 0.00 0.00 0.00 4.30
4834 6284 1.988293 TGGGTGCTCAAATTTTCCGA 58.012 45.000 0.00 0.00 0.00 4.55
4841 7519 5.332707 GTGCTCAAATTTTCCGATAACCTC 58.667 41.667 0.00 0.00 0.00 3.85
4848 7526 9.849166 TCAAATTTTCCGATAACCTCAAATTAC 57.151 29.630 0.00 0.00 0.00 1.89
4854 7532 6.282167 TCCGATAACCTCAAATTACGCATTA 58.718 36.000 0.00 0.00 0.00 1.90
4868 7546 6.503589 TTACGCATTACTTTAGCAAACCAT 57.496 33.333 0.00 0.00 0.00 3.55
4874 7552 7.488322 GCATTACTTTAGCAAACCATTGGATA 58.512 34.615 10.37 0.00 37.02 2.59
4899 7577 7.663043 TTTTGGTTTGTAAACAATACTCCCT 57.337 32.000 9.44 0.00 40.63 4.20
4900 7578 6.887626 TTGGTTTGTAAACAATACTCCCTC 57.112 37.500 9.44 0.00 40.63 4.30
4901 7579 5.318630 TGGTTTGTAAACAATACTCCCTCC 58.681 41.667 9.44 0.00 40.63 4.30
4902 7580 4.393990 GGTTTGTAAACAATACTCCCTCCG 59.606 45.833 9.44 0.00 40.63 4.63
4903 7581 3.255969 TGTAAACAATACTCCCTCCGC 57.744 47.619 0.00 0.00 0.00 5.54
4904 7582 2.093341 TGTAAACAATACTCCCTCCGCC 60.093 50.000 0.00 0.00 0.00 6.13
4905 7583 0.255033 AAACAATACTCCCTCCGCCC 59.745 55.000 0.00 0.00 0.00 6.13
4906 7584 1.632965 AACAATACTCCCTCCGCCCC 61.633 60.000 0.00 0.00 0.00 5.80
4907 7585 2.842936 AATACTCCCTCCGCCCCG 60.843 66.667 0.00 0.00 0.00 5.73
4908 7586 3.691297 AATACTCCCTCCGCCCCGT 62.691 63.158 0.00 0.00 0.00 5.28
4912 7590 4.146156 TCCCTCCGCCCCGTGATA 62.146 66.667 0.00 0.00 0.00 2.15
4913 7591 2.923035 CCCTCCGCCCCGTGATAT 60.923 66.667 0.00 0.00 0.00 1.63
4914 7592 1.608336 CCCTCCGCCCCGTGATATA 60.608 63.158 0.00 0.00 0.00 0.86
4915 7593 1.189524 CCCTCCGCCCCGTGATATAA 61.190 60.000 0.00 0.00 0.00 0.98
4916 7594 0.246635 CCTCCGCCCCGTGATATAAG 59.753 60.000 0.00 0.00 0.00 1.73
4917 7595 1.254026 CTCCGCCCCGTGATATAAGA 58.746 55.000 0.00 0.00 0.00 2.10
4918 7596 0.963962 TCCGCCCCGTGATATAAGAC 59.036 55.000 0.00 0.00 0.00 3.01
4919 7597 0.388134 CCGCCCCGTGATATAAGACG 60.388 60.000 0.00 0.00 35.31 4.18
4920 7598 0.313043 CGCCCCGTGATATAAGACGT 59.687 55.000 0.00 0.00 33.66 4.34
4921 7599 1.269413 CGCCCCGTGATATAAGACGTT 60.269 52.381 0.00 0.00 33.66 3.99
4922 7600 2.800629 CGCCCCGTGATATAAGACGTTT 60.801 50.000 0.00 0.00 33.66 3.60
4923 7601 3.200483 GCCCCGTGATATAAGACGTTTT 58.800 45.455 0.00 0.00 33.66 2.43
4924 7602 3.624410 GCCCCGTGATATAAGACGTTTTT 59.376 43.478 0.00 0.00 33.66 1.94
4925 7603 4.810491 GCCCCGTGATATAAGACGTTTTTA 59.190 41.667 0.00 0.00 33.66 1.52
4926 7604 5.277011 GCCCCGTGATATAAGACGTTTTTAC 60.277 44.000 0.00 0.00 33.66 2.01
4927 7605 5.811613 CCCCGTGATATAAGACGTTTTTACA 59.188 40.000 0.00 0.00 33.66 2.41
4928 7606 6.019318 CCCCGTGATATAAGACGTTTTTACAG 60.019 42.308 0.00 0.00 33.66 2.74
4929 7607 6.019318 CCCGTGATATAAGACGTTTTTACAGG 60.019 42.308 0.00 0.00 33.66 4.00
4930 7608 6.408428 CGTGATATAAGACGTTTTTACAGGC 58.592 40.000 0.00 0.00 0.00 4.85
4931 7609 6.255020 CGTGATATAAGACGTTTTTACAGGCT 59.745 38.462 0.00 0.00 0.00 4.58
4932 7610 7.433131 CGTGATATAAGACGTTTTTACAGGCTA 59.567 37.037 0.00 0.00 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.959596 GAGGATCGGCGAGGCAGC 62.960 72.222 17.22 1.84 0.00 5.25
5 6 2.865598 ATGAGGATCGGCGAGGCAG 61.866 63.158 17.22 0.00 38.61 4.85
6 7 2.839632 ATGAGGATCGGCGAGGCA 60.840 61.111 17.22 10.79 38.61 4.75
7 8 2.356793 CATGAGGATCGGCGAGGC 60.357 66.667 17.22 9.97 38.61 4.70
8 9 0.598680 GTTCATGAGGATCGGCGAGG 60.599 60.000 17.22 0.00 38.61 4.63
9 10 0.103026 TGTTCATGAGGATCGGCGAG 59.897 55.000 17.22 0.00 38.61 5.03
10 11 0.103026 CTGTTCATGAGGATCGGCGA 59.897 55.000 13.87 13.87 38.61 5.54
11 12 0.179100 ACTGTTCATGAGGATCGGCG 60.179 55.000 0.00 0.00 38.61 6.46
12 13 1.293924 CACTGTTCATGAGGATCGGC 58.706 55.000 0.00 0.00 38.61 5.54
13 14 1.945387 CCACTGTTCATGAGGATCGG 58.055 55.000 0.00 0.00 38.61 4.18
14 15 1.293924 GCCACTGTTCATGAGGATCG 58.706 55.000 2.22 0.00 38.61 3.69
15 16 1.673168 GGCCACTGTTCATGAGGATC 58.327 55.000 0.00 0.00 0.00 3.36
16 17 0.107508 CGGCCACTGTTCATGAGGAT 60.108 55.000 2.24 0.00 0.00 3.24
17 18 1.296392 CGGCCACTGTTCATGAGGA 59.704 57.895 2.24 0.00 0.00 3.71
18 19 1.003355 ACGGCCACTGTTCATGAGG 60.003 57.895 2.24 0.00 0.00 3.86
19 20 1.354337 CGACGGCCACTGTTCATGAG 61.354 60.000 2.24 0.00 0.00 2.90
20 21 1.374125 CGACGGCCACTGTTCATGA 60.374 57.895 2.24 0.00 0.00 3.07
21 22 1.354337 CTCGACGGCCACTGTTCATG 61.354 60.000 2.24 0.00 0.00 3.07
22 23 1.079819 CTCGACGGCCACTGTTCAT 60.080 57.895 2.24 0.00 0.00 2.57
23 24 2.338620 CTCGACGGCCACTGTTCA 59.661 61.111 2.24 0.00 0.00 3.18
24 25 2.022129 CACTCGACGGCCACTGTTC 61.022 63.158 2.24 0.00 0.00 3.18
25 26 2.029073 CACTCGACGGCCACTGTT 59.971 61.111 2.24 0.00 0.00 3.16
26 27 4.664677 GCACTCGACGGCCACTGT 62.665 66.667 2.24 0.00 0.00 3.55
42 43 1.210155 GATGTGTCTTTGCGGTGGC 59.790 57.895 0.00 0.00 40.52 5.01
43 44 0.518636 CTGATGTGTCTTTGCGGTGG 59.481 55.000 0.00 0.00 0.00 4.61
44 45 0.518636 CCTGATGTGTCTTTGCGGTG 59.481 55.000 0.00 0.00 0.00 4.94
45 46 0.396435 TCCTGATGTGTCTTTGCGGT 59.604 50.000 0.00 0.00 0.00 5.68
46 47 1.081892 CTCCTGATGTGTCTTTGCGG 58.918 55.000 0.00 0.00 0.00 5.69
47 48 0.445436 GCTCCTGATGTGTCTTTGCG 59.555 55.000 0.00 0.00 0.00 4.85
48 49 1.527034 TGCTCCTGATGTGTCTTTGC 58.473 50.000 0.00 0.00 0.00 3.68
49 50 3.057736 CCTTTGCTCCTGATGTGTCTTTG 60.058 47.826 0.00 0.00 0.00 2.77
50 51 3.152341 CCTTTGCTCCTGATGTGTCTTT 58.848 45.455 0.00 0.00 0.00 2.52
51 52 2.373169 TCCTTTGCTCCTGATGTGTCTT 59.627 45.455 0.00 0.00 0.00 3.01
52 53 1.980765 TCCTTTGCTCCTGATGTGTCT 59.019 47.619 0.00 0.00 0.00 3.41
53 54 2.354259 CTCCTTTGCTCCTGATGTGTC 58.646 52.381 0.00 0.00 0.00 3.67
54 55 1.004044 CCTCCTTTGCTCCTGATGTGT 59.996 52.381 0.00 0.00 0.00 3.72
55 56 1.280133 TCCTCCTTTGCTCCTGATGTG 59.720 52.381 0.00 0.00 0.00 3.21
56 57 1.558756 CTCCTCCTTTGCTCCTGATGT 59.441 52.381 0.00 0.00 0.00 3.06
57 58 1.558756 ACTCCTCCTTTGCTCCTGATG 59.441 52.381 0.00 0.00 0.00 3.07
58 59 1.963985 ACTCCTCCTTTGCTCCTGAT 58.036 50.000 0.00 0.00 0.00 2.90
59 60 1.734655 AACTCCTCCTTTGCTCCTGA 58.265 50.000 0.00 0.00 0.00 3.86
60 61 2.157738 CAAACTCCTCCTTTGCTCCTG 58.842 52.381 0.00 0.00 0.00 3.86
61 62 1.074566 CCAAACTCCTCCTTTGCTCCT 59.925 52.381 0.00 0.00 0.00 3.69
62 63 1.539157 CCAAACTCCTCCTTTGCTCC 58.461 55.000 0.00 0.00 0.00 4.70
63 64 1.539157 CCCAAACTCCTCCTTTGCTC 58.461 55.000 0.00 0.00 0.00 4.26
64 65 0.540597 GCCCAAACTCCTCCTTTGCT 60.541 55.000 0.00 0.00 0.00 3.91
65 66 0.827507 TGCCCAAACTCCTCCTTTGC 60.828 55.000 0.00 0.00 0.00 3.68
66 67 0.961753 GTGCCCAAACTCCTCCTTTG 59.038 55.000 0.00 0.00 0.00 2.77
67 68 0.555769 TGTGCCCAAACTCCTCCTTT 59.444 50.000 0.00 0.00 0.00 3.11
68 69 0.555769 TTGTGCCCAAACTCCTCCTT 59.444 50.000 0.00 0.00 0.00 3.36
69 70 0.555769 TTTGTGCCCAAACTCCTCCT 59.444 50.000 0.00 0.00 35.67 3.69
70 71 1.546029 GATTTGTGCCCAAACTCCTCC 59.454 52.381 0.00 0.00 43.03 4.30
71 72 1.200020 CGATTTGTGCCCAAACTCCTC 59.800 52.381 0.00 0.00 43.03 3.71
72 73 1.247567 CGATTTGTGCCCAAACTCCT 58.752 50.000 0.00 0.00 43.03 3.69
73 74 0.388520 GCGATTTGTGCCCAAACTCC 60.389 55.000 0.00 0.00 43.03 3.85
74 75 0.729140 CGCGATTTGTGCCCAAACTC 60.729 55.000 0.00 0.00 43.03 3.01
75 76 1.285641 CGCGATTTGTGCCCAAACT 59.714 52.632 0.00 0.00 43.03 2.66
76 77 1.732683 CCGCGATTTGTGCCCAAAC 60.733 57.895 8.23 0.00 43.03 2.93
77 78 2.647875 CCGCGATTTGTGCCCAAA 59.352 55.556 8.23 0.00 44.27 3.28
78 79 4.049640 GCCGCGATTTGTGCCCAA 62.050 61.111 8.23 0.00 0.00 4.12
83 84 4.459331 CCACCGCCGCGATTTGTG 62.459 66.667 15.93 13.25 0.00 3.33
84 85 4.690719 TCCACCGCCGCGATTTGT 62.691 61.111 15.93 0.00 0.00 2.83
85 86 3.864686 CTCCACCGCCGCGATTTG 61.865 66.667 15.93 8.12 0.00 2.32
103 104 0.178987 TATCTCTCACGGGAGGGCTC 60.179 60.000 16.20 0.00 41.71 4.70
104 105 0.178975 CTATCTCTCACGGGAGGGCT 60.179 60.000 16.20 5.24 41.71 5.19
105 106 0.178987 TCTATCTCTCACGGGAGGGC 60.179 60.000 16.20 0.00 41.71 5.19
106 107 1.422024 TCTCTATCTCTCACGGGAGGG 59.578 57.143 16.20 12.73 43.45 4.30
107 108 2.370519 TCTCTCTATCTCTCACGGGAGG 59.629 54.545 16.20 5.79 41.69 4.30
108 109 3.323691 TCTCTCTCTATCTCTCACGGGAG 59.676 52.174 8.88 8.88 42.80 4.30
109 110 3.310193 TCTCTCTCTATCTCTCACGGGA 58.690 50.000 0.00 0.00 0.00 5.14
110 111 3.323691 TCTCTCTCTCTATCTCTCACGGG 59.676 52.174 0.00 0.00 0.00 5.28
111 112 4.560128 CTCTCTCTCTCTATCTCTCACGG 58.440 52.174 0.00 0.00 0.00 4.94
112 113 4.039245 ACCTCTCTCTCTCTATCTCTCACG 59.961 50.000 0.00 0.00 0.00 4.35
113 114 5.300752 CACCTCTCTCTCTCTATCTCTCAC 58.699 50.000 0.00 0.00 0.00 3.51
114 115 4.347876 CCACCTCTCTCTCTCTATCTCTCA 59.652 50.000 0.00 0.00 0.00 3.27
115 116 4.263068 CCCACCTCTCTCTCTCTATCTCTC 60.263 54.167 0.00 0.00 0.00 3.20
116 117 3.652869 CCCACCTCTCTCTCTCTATCTCT 59.347 52.174 0.00 0.00 0.00 3.10
117 118 3.244911 CCCCACCTCTCTCTCTCTATCTC 60.245 56.522 0.00 0.00 0.00 2.75
118 119 2.716424 CCCCACCTCTCTCTCTCTATCT 59.284 54.545 0.00 0.00 0.00 1.98
119 120 2.714250 TCCCCACCTCTCTCTCTCTATC 59.286 54.545 0.00 0.00 0.00 2.08
120 121 2.445525 GTCCCCACCTCTCTCTCTCTAT 59.554 54.545 0.00 0.00 0.00 1.98
121 122 1.847737 GTCCCCACCTCTCTCTCTCTA 59.152 57.143 0.00 0.00 0.00 2.43
122 123 0.629058 GTCCCCACCTCTCTCTCTCT 59.371 60.000 0.00 0.00 0.00 3.10
123 124 0.750182 CGTCCCCACCTCTCTCTCTC 60.750 65.000 0.00 0.00 0.00 3.20
124 125 1.208844 TCGTCCCCACCTCTCTCTCT 61.209 60.000 0.00 0.00 0.00 3.10
125 126 0.323542 TTCGTCCCCACCTCTCTCTC 60.324 60.000 0.00 0.00 0.00 3.20
126 127 0.114560 TTTCGTCCCCACCTCTCTCT 59.885 55.000 0.00 0.00 0.00 3.10
127 128 0.974383 TTTTCGTCCCCACCTCTCTC 59.026 55.000 0.00 0.00 0.00 3.20
128 129 0.685660 GTTTTCGTCCCCACCTCTCT 59.314 55.000 0.00 0.00 0.00 3.10
129 130 0.669625 CGTTTTCGTCCCCACCTCTC 60.670 60.000 0.00 0.00 38.65 3.20
130 131 1.117142 TCGTTTTCGTCCCCACCTCT 61.117 55.000 0.00 0.00 44.46 3.69
131 132 0.669625 CTCGTTTTCGTCCCCACCTC 60.670 60.000 0.00 0.00 44.46 3.85
132 133 1.370064 CTCGTTTTCGTCCCCACCT 59.630 57.895 0.00 0.00 44.46 4.00
133 134 1.670083 CCTCGTTTTCGTCCCCACC 60.670 63.158 0.00 0.00 44.46 4.61
134 135 1.670083 CCCTCGTTTTCGTCCCCAC 60.670 63.158 0.00 0.00 44.46 4.61
135 136 1.823169 CTCCCTCGTTTTCGTCCCCA 61.823 60.000 0.00 0.00 44.46 4.96
136 137 1.079336 CTCCCTCGTTTTCGTCCCC 60.079 63.158 0.00 0.00 44.46 4.81
137 138 1.079336 CCTCCCTCGTTTTCGTCCC 60.079 63.158 0.00 0.00 44.46 4.46
138 139 0.319405 TTCCTCCCTCGTTTTCGTCC 59.681 55.000 0.00 0.00 44.46 4.79
139 140 1.271656 TCTTCCTCCCTCGTTTTCGTC 59.728 52.381 0.00 0.00 44.46 4.20
140 141 1.335145 TCTTCCTCCCTCGTTTTCGT 58.665 50.000 0.00 0.00 44.46 3.85
141 142 2.450609 TTCTTCCTCCCTCGTTTTCG 57.549 50.000 0.00 0.00 45.64 3.46
142 143 3.997681 CTCTTTCTTCCTCCCTCGTTTTC 59.002 47.826 0.00 0.00 0.00 2.29
143 144 3.244596 CCTCTTTCTTCCTCCCTCGTTTT 60.245 47.826 0.00 0.00 0.00 2.43
144 145 2.303311 CCTCTTTCTTCCTCCCTCGTTT 59.697 50.000 0.00 0.00 0.00 3.60
145 146 1.903183 CCTCTTTCTTCCTCCCTCGTT 59.097 52.381 0.00 0.00 0.00 3.85
146 147 1.203199 ACCTCTTTCTTCCTCCCTCGT 60.203 52.381 0.00 0.00 0.00 4.18
147 148 1.562783 ACCTCTTTCTTCCTCCCTCG 58.437 55.000 0.00 0.00 0.00 4.63
148 149 3.452990 CCTTACCTCTTTCTTCCTCCCTC 59.547 52.174 0.00 0.00 0.00 4.30
149 150 3.181394 ACCTTACCTCTTTCTTCCTCCCT 60.181 47.826 0.00 0.00 0.00 4.20
150 151 3.182976 ACCTTACCTCTTTCTTCCTCCC 58.817 50.000 0.00 0.00 0.00 4.30
151 152 4.565861 CCAACCTTACCTCTTTCTTCCTCC 60.566 50.000 0.00 0.00 0.00 4.30
152 153 4.565861 CCCAACCTTACCTCTTTCTTCCTC 60.566 50.000 0.00 0.00 0.00 3.71
153 154 3.330998 CCCAACCTTACCTCTTTCTTCCT 59.669 47.826 0.00 0.00 0.00 3.36
154 155 3.687125 CCCAACCTTACCTCTTTCTTCC 58.313 50.000 0.00 0.00 0.00 3.46
155 156 3.082548 GCCCAACCTTACCTCTTTCTTC 58.917 50.000 0.00 0.00 0.00 2.87
156 157 2.225041 GGCCCAACCTTACCTCTTTCTT 60.225 50.000 0.00 0.00 34.51 2.52
157 158 1.354705 GGCCCAACCTTACCTCTTTCT 59.645 52.381 0.00 0.00 34.51 2.52
158 159 1.835494 GGCCCAACCTTACCTCTTTC 58.165 55.000 0.00 0.00 34.51 2.62
169 170 1.071814 TGTTCGTGTAGGCCCAACC 59.928 57.895 0.00 0.00 39.61 3.77
170 171 1.562575 CGTGTTCGTGTAGGCCCAAC 61.563 60.000 0.00 0.00 0.00 3.77
171 172 1.301087 CGTGTTCGTGTAGGCCCAA 60.301 57.895 0.00 0.00 0.00 4.12
172 173 2.340809 CGTGTTCGTGTAGGCCCA 59.659 61.111 0.00 0.00 0.00 5.36
182 183 2.223157 ACCAAAACATGACACGTGTTCG 60.223 45.455 24.26 16.10 38.76 3.95
183 184 3.414549 ACCAAAACATGACACGTGTTC 57.585 42.857 24.26 15.93 38.76 3.18
184 185 3.506810 CAACCAAAACATGACACGTGTT 58.493 40.909 24.26 4.55 41.28 3.32
185 186 2.159310 CCAACCAAAACATGACACGTGT 60.159 45.455 23.64 23.64 0.00 4.49
186 187 2.159310 ACCAACCAAAACATGACACGTG 60.159 45.455 15.48 15.48 0.00 4.49
187 188 2.096248 ACCAACCAAAACATGACACGT 58.904 42.857 0.00 0.00 0.00 4.49
188 189 2.861462 ACCAACCAAAACATGACACG 57.139 45.000 0.00 0.00 0.00 4.49
189 190 4.499183 TCAAACCAACCAAAACATGACAC 58.501 39.130 0.00 0.00 0.00 3.67
190 191 4.808414 TCAAACCAACCAAAACATGACA 57.192 36.364 0.00 0.00 0.00 3.58
191 192 6.512297 AGTATCAAACCAACCAAAACATGAC 58.488 36.000 0.00 0.00 0.00 3.06
192 193 6.723298 AGTATCAAACCAACCAAAACATGA 57.277 33.333 0.00 0.00 0.00 3.07
193 194 9.487790 AATTAGTATCAAACCAACCAAAACATG 57.512 29.630 0.00 0.00 0.00 3.21
194 195 9.487790 CAATTAGTATCAAACCAACCAAAACAT 57.512 29.630 0.00 0.00 0.00 2.71
195 196 7.928706 CCAATTAGTATCAAACCAACCAAAACA 59.071 33.333 0.00 0.00 0.00 2.83
196 197 7.929245 ACCAATTAGTATCAAACCAACCAAAAC 59.071 33.333 0.00 0.00 0.00 2.43
197 198 8.024145 ACCAATTAGTATCAAACCAACCAAAA 57.976 30.769 0.00 0.00 0.00 2.44
198 199 7.604657 ACCAATTAGTATCAAACCAACCAAA 57.395 32.000 0.00 0.00 0.00 3.28
199 200 7.604657 AACCAATTAGTATCAAACCAACCAA 57.395 32.000 0.00 0.00 0.00 3.67
200 201 7.604657 AAACCAATTAGTATCAAACCAACCA 57.395 32.000 0.00 0.00 0.00 3.67
242 243 9.193806 AGGAATGTGTTTATCTTTCATATTGCT 57.806 29.630 0.00 0.00 36.89 3.91
243 244 9.807649 AAGGAATGTGTTTATCTTTCATATTGC 57.192 29.630 0.00 0.00 33.78 3.56
246 247 9.699410 TGGAAGGAATGTGTTTATCTTTCATAT 57.301 29.630 0.00 0.00 32.59 1.78
247 248 9.527157 TTGGAAGGAATGTGTTTATCTTTCATA 57.473 29.630 0.00 0.00 32.59 2.15
248 249 8.421249 TTGGAAGGAATGTGTTTATCTTTCAT 57.579 30.769 0.00 0.00 32.59 2.57
249 250 7.831691 TTGGAAGGAATGTGTTTATCTTTCA 57.168 32.000 0.00 0.00 32.59 2.69
250 251 9.541143 TTTTTGGAAGGAATGTGTTTATCTTTC 57.459 29.630 0.00 0.00 0.00 2.62
337 338 7.872483 CGGCCCTGAATGCTTAATATTATTTTT 59.128 33.333 0.00 0.00 0.00 1.94
338 339 7.232534 TCGGCCCTGAATGCTTAATATTATTTT 59.767 33.333 0.00 0.00 0.00 1.82
339 340 6.719370 TCGGCCCTGAATGCTTAATATTATTT 59.281 34.615 0.00 0.00 0.00 1.40
340 341 6.245408 TCGGCCCTGAATGCTTAATATTATT 58.755 36.000 0.00 0.00 0.00 1.40
341 342 5.815581 TCGGCCCTGAATGCTTAATATTAT 58.184 37.500 0.00 0.00 0.00 1.28
342 343 5.235850 TCGGCCCTGAATGCTTAATATTA 57.764 39.130 0.00 0.00 0.00 0.98
343 344 4.074970 CTCGGCCCTGAATGCTTAATATT 58.925 43.478 0.00 0.00 0.00 1.28
344 345 3.679389 CTCGGCCCTGAATGCTTAATAT 58.321 45.455 0.00 0.00 0.00 1.28
345 346 2.810400 GCTCGGCCCTGAATGCTTAATA 60.810 50.000 0.00 0.00 0.00 0.98
346 347 1.972872 CTCGGCCCTGAATGCTTAAT 58.027 50.000 0.00 0.00 0.00 1.40
347 348 0.748005 GCTCGGCCCTGAATGCTTAA 60.748 55.000 0.00 0.00 0.00 1.85
348 349 1.153168 GCTCGGCCCTGAATGCTTA 60.153 57.895 0.00 0.00 0.00 3.09
349 350 2.439156 GCTCGGCCCTGAATGCTT 60.439 61.111 0.00 0.00 0.00 3.91
350 351 4.496336 GGCTCGGCCCTGAATGCT 62.496 66.667 0.00 0.00 44.06 3.79
371 372 2.032924 GCGTGGTATTGTTGGATTAGCC 59.967 50.000 0.00 0.00 37.10 3.93
372 373 2.286184 CGCGTGGTATTGTTGGATTAGC 60.286 50.000 0.00 0.00 0.00 3.09
373 374 2.933906 ACGCGTGGTATTGTTGGATTAG 59.066 45.455 12.93 0.00 0.00 1.73
374 375 2.673862 CACGCGTGGTATTGTTGGATTA 59.326 45.455 31.15 0.00 0.00 1.75
375 376 1.466950 CACGCGTGGTATTGTTGGATT 59.533 47.619 31.15 0.00 0.00 3.01
376 377 1.083489 CACGCGTGGTATTGTTGGAT 58.917 50.000 31.15 0.00 0.00 3.41
377 378 1.570347 GCACGCGTGGTATTGTTGGA 61.570 55.000 37.47 0.00 0.00 3.53
378 379 1.154301 GCACGCGTGGTATTGTTGG 60.154 57.895 37.47 11.39 0.00 3.77
379 380 1.154301 GGCACGCGTGGTATTGTTG 60.154 57.895 37.47 12.23 0.00 3.33
380 381 1.573829 CTGGCACGCGTGGTATTGTT 61.574 55.000 37.47 0.00 0.00 2.83
381 382 2.031314 TGGCACGCGTGGTATTGT 59.969 55.556 37.47 0.00 0.00 2.71
382 383 2.784596 CTGGCACGCGTGGTATTG 59.215 61.111 37.47 14.55 0.00 1.90
383 384 2.233605 TAGCTGGCACGCGTGGTATT 62.234 55.000 37.47 14.84 33.54 1.89
384 385 2.233605 TTAGCTGGCACGCGTGGTAT 62.234 55.000 37.47 17.38 33.54 2.73
385 386 2.437518 TTTAGCTGGCACGCGTGGTA 62.438 55.000 37.47 20.22 33.54 3.25
386 387 3.818121 TTTAGCTGGCACGCGTGGT 62.818 57.895 37.47 21.29 33.54 4.16
387 388 2.123988 TTTTTAGCTGGCACGCGTGG 62.124 55.000 37.47 23.41 33.54 4.94
388 389 0.109781 ATTTTTAGCTGGCACGCGTG 60.110 50.000 34.01 34.01 33.54 5.34
389 390 1.129811 GTATTTTTAGCTGGCACGCGT 59.870 47.619 5.58 5.58 33.54 6.01
390 391 1.810197 GTATTTTTAGCTGGCACGCG 58.190 50.000 3.53 3.53 33.54 6.01
391 392 1.531058 CCGTATTTTTAGCTGGCACGC 60.531 52.381 0.00 1.36 0.00 5.34
392 393 1.063469 CCCGTATTTTTAGCTGGCACG 59.937 52.381 0.00 0.00 0.00 5.34
393 394 1.202256 GCCCGTATTTTTAGCTGGCAC 60.202 52.381 0.00 0.00 37.36 5.01
394 395 1.099689 GCCCGTATTTTTAGCTGGCA 58.900 50.000 0.00 0.00 37.36 4.92
395 396 0.384309 GGCCCGTATTTTTAGCTGGC 59.616 55.000 0.00 0.00 36.68 4.85
396 397 2.052782 AGGCCCGTATTTTTAGCTGG 57.947 50.000 0.00 0.00 0.00 4.85
397 398 5.767816 AAATAGGCCCGTATTTTTAGCTG 57.232 39.130 0.00 0.00 29.91 4.24
398 399 7.039993 CCAATAAATAGGCCCGTATTTTTAGCT 60.040 37.037 13.51 0.00 34.93 3.32
399 400 7.088272 CCAATAAATAGGCCCGTATTTTTAGC 58.912 38.462 13.51 0.00 34.93 3.09
400 401 7.231925 ACCCAATAAATAGGCCCGTATTTTTAG 59.768 37.037 13.51 5.86 34.93 1.85
401 402 7.068061 ACCCAATAAATAGGCCCGTATTTTTA 58.932 34.615 13.51 2.47 34.93 1.52
402 403 5.900699 ACCCAATAAATAGGCCCGTATTTTT 59.099 36.000 13.51 5.31 34.93 1.94
403 404 5.460416 ACCCAATAAATAGGCCCGTATTTT 58.540 37.500 13.51 3.90 34.93 1.82
404 405 5.069518 ACCCAATAAATAGGCCCGTATTT 57.930 39.130 13.00 13.00 36.70 1.40
405 406 4.734843 ACCCAATAAATAGGCCCGTATT 57.265 40.909 0.00 0.00 0.00 1.89
406 407 4.734843 AACCCAATAAATAGGCCCGTAT 57.265 40.909 0.00 0.00 0.00 3.06
407 408 4.208746 CAAACCCAATAAATAGGCCCGTA 58.791 43.478 0.00 0.00 0.00 4.02
408 409 3.028130 CAAACCCAATAAATAGGCCCGT 58.972 45.455 0.00 0.00 0.00 5.28
409 410 2.364002 CCAAACCCAATAAATAGGCCCG 59.636 50.000 0.00 0.00 0.00 6.13
410 411 2.104111 GCCAAACCCAATAAATAGGCCC 59.896 50.000 0.00 0.00 34.94 5.80
411 412 3.469008 GCCAAACCCAATAAATAGGCC 57.531 47.619 0.00 0.00 34.94 5.19
412 413 3.469008 GGCCAAACCCAATAAATAGGC 57.531 47.619 0.00 0.00 40.08 3.93
427 428 0.253327 GGTTTTGGTGTTTGGGCCAA 59.747 50.000 16.66 16.66 42.38 4.52
428 429 0.909610 TGGTTTTGGTGTTTGGGCCA 60.910 50.000 0.00 0.00 0.00 5.36
429 430 0.462937 GTGGTTTTGGTGTTTGGGCC 60.463 55.000 0.00 0.00 0.00 5.80
430 431 0.539518 AGTGGTTTTGGTGTTTGGGC 59.460 50.000 0.00 0.00 0.00 5.36
431 432 3.449377 AGTTAGTGGTTTTGGTGTTTGGG 59.551 43.478 0.00 0.00 0.00 4.12
432 433 4.678622 GAGTTAGTGGTTTTGGTGTTTGG 58.321 43.478 0.00 0.00 0.00 3.28
433 434 4.095185 TCGAGTTAGTGGTTTTGGTGTTTG 59.905 41.667 0.00 0.00 0.00 2.93
434 435 4.095334 GTCGAGTTAGTGGTTTTGGTGTTT 59.905 41.667 0.00 0.00 0.00 2.83
435 436 3.624410 GTCGAGTTAGTGGTTTTGGTGTT 59.376 43.478 0.00 0.00 0.00 3.32
436 437 3.200483 GTCGAGTTAGTGGTTTTGGTGT 58.800 45.455 0.00 0.00 0.00 4.16
437 438 2.220133 CGTCGAGTTAGTGGTTTTGGTG 59.780 50.000 0.00 0.00 0.00 4.17
438 439 2.476821 CGTCGAGTTAGTGGTTTTGGT 58.523 47.619 0.00 0.00 0.00 3.67
439 440 1.796459 CCGTCGAGTTAGTGGTTTTGG 59.204 52.381 0.00 0.00 0.00 3.28
440 441 2.746269 TCCGTCGAGTTAGTGGTTTTG 58.254 47.619 0.00 0.00 0.00 2.44
441 442 3.068590 TCTTCCGTCGAGTTAGTGGTTTT 59.931 43.478 0.00 0.00 0.00 2.43
442 443 2.624838 TCTTCCGTCGAGTTAGTGGTTT 59.375 45.455 0.00 0.00 0.00 3.27
443 444 2.233271 TCTTCCGTCGAGTTAGTGGTT 58.767 47.619 0.00 0.00 0.00 3.67
444 445 1.901591 TCTTCCGTCGAGTTAGTGGT 58.098 50.000 0.00 0.00 0.00 4.16
445 446 3.293311 TTTCTTCCGTCGAGTTAGTGG 57.707 47.619 0.00 0.00 0.00 4.00
446 447 4.235360 ACATTTCTTCCGTCGAGTTAGTG 58.765 43.478 0.00 0.00 0.00 2.74
447 448 4.516365 ACATTTCTTCCGTCGAGTTAGT 57.484 40.909 0.00 0.00 0.00 2.24
448 449 7.521509 AATAACATTTCTTCCGTCGAGTTAG 57.478 36.000 0.00 0.00 0.00 2.34
449 450 7.894376 AAATAACATTTCTTCCGTCGAGTTA 57.106 32.000 0.00 0.00 0.00 2.24
450 451 6.796705 AAATAACATTTCTTCCGTCGAGTT 57.203 33.333 0.00 0.00 0.00 3.01
451 452 6.796705 AAAATAACATTTCTTCCGTCGAGT 57.203 33.333 0.00 0.00 0.00 4.18
476 477 5.589855 TCTGAGCACACTGAAATCTCAAAAA 59.410 36.000 0.00 0.00 33.93 1.94
477 478 5.125356 TCTGAGCACACTGAAATCTCAAAA 58.875 37.500 0.00 0.00 33.93 2.44
478 479 4.707105 TCTGAGCACACTGAAATCTCAAA 58.293 39.130 0.00 0.00 33.93 2.69
479 480 4.313282 CTCTGAGCACACTGAAATCTCAA 58.687 43.478 0.00 0.00 33.93 3.02
480 481 3.863780 GCTCTGAGCACACTGAAATCTCA 60.864 47.826 24.02 0.00 41.89 3.27
481 482 2.672381 GCTCTGAGCACACTGAAATCTC 59.328 50.000 24.02 0.00 41.89 2.75
482 483 2.302445 AGCTCTGAGCACACTGAAATCT 59.698 45.455 29.49 3.19 45.56 2.40
483 484 2.672381 GAGCTCTGAGCACACTGAAATC 59.328 50.000 29.49 12.39 45.56 2.17
484 485 2.038164 TGAGCTCTGAGCACACTGAAAT 59.962 45.455 29.49 7.18 45.56 2.17
485 486 1.413812 TGAGCTCTGAGCACACTGAAA 59.586 47.619 29.49 5.52 45.56 2.69
486 487 1.043022 TGAGCTCTGAGCACACTGAA 58.957 50.000 29.49 6.22 45.56 3.02
487 488 1.043022 TTGAGCTCTGAGCACACTGA 58.957 50.000 29.49 13.25 45.56 3.41
488 489 1.732809 CATTGAGCTCTGAGCACACTG 59.267 52.381 29.49 26.64 45.56 3.66
489 490 1.338864 CCATTGAGCTCTGAGCACACT 60.339 52.381 29.49 20.78 45.56 3.55
490 491 1.085091 CCATTGAGCTCTGAGCACAC 58.915 55.000 29.49 19.85 45.56 3.82
491 492 0.689055 ACCATTGAGCTCTGAGCACA 59.311 50.000 29.49 26.16 45.56 4.57
492 493 1.085091 CACCATTGAGCTCTGAGCAC 58.915 55.000 29.49 23.92 45.56 4.40
493 494 0.675837 GCACCATTGAGCTCTGAGCA 60.676 55.000 29.49 11.36 45.56 4.26
494 495 1.703438 CGCACCATTGAGCTCTGAGC 61.703 60.000 21.72 21.72 42.84 4.26
495 496 1.088340 CCGCACCATTGAGCTCTGAG 61.088 60.000 16.19 5.98 0.00 3.35
496 497 1.078918 CCGCACCATTGAGCTCTGA 60.079 57.895 16.19 3.92 0.00 3.27
497 498 0.463295 ATCCGCACCATTGAGCTCTG 60.463 55.000 16.19 5.58 0.00 3.35
498 499 0.463295 CATCCGCACCATTGAGCTCT 60.463 55.000 16.19 0.00 0.00 4.09
499 500 0.745845 ACATCCGCACCATTGAGCTC 60.746 55.000 6.82 6.82 0.00 4.09
500 501 0.322816 AACATCCGCACCATTGAGCT 60.323 50.000 0.00 0.00 0.00 4.09
501 502 0.527565 AAACATCCGCACCATTGAGC 59.472 50.000 0.00 0.00 0.00 4.26
502 503 1.541147 ACAAACATCCGCACCATTGAG 59.459 47.619 0.00 0.00 0.00 3.02
503 504 1.614996 ACAAACATCCGCACCATTGA 58.385 45.000 0.00 0.00 0.00 2.57
504 505 2.437200 AACAAACATCCGCACCATTG 57.563 45.000 0.00 0.00 0.00 2.82
505 506 2.363680 TGAAACAAACATCCGCACCATT 59.636 40.909 0.00 0.00 0.00 3.16
506 507 1.959985 TGAAACAAACATCCGCACCAT 59.040 42.857 0.00 0.00 0.00 3.55
552 553 7.581213 TTGAGCTTTCAACCTTTTTCATCTA 57.419 32.000 0.00 0.00 0.00 1.98
553 554 6.469782 TTGAGCTTTCAACCTTTTTCATCT 57.530 33.333 0.00 0.00 0.00 2.90
554 555 7.538303 TTTTGAGCTTTCAACCTTTTTCATC 57.462 32.000 0.00 0.00 0.00 2.92
556 557 7.605691 TGAATTTTGAGCTTTCAACCTTTTTCA 59.394 29.630 0.00 0.00 0.00 2.69
557 558 7.973601 TGAATTTTGAGCTTTCAACCTTTTTC 58.026 30.769 0.00 0.00 0.00 2.29
558 559 7.920160 TGAATTTTGAGCTTTCAACCTTTTT 57.080 28.000 0.00 0.00 0.00 1.94
559 560 7.920160 TTGAATTTTGAGCTTTCAACCTTTT 57.080 28.000 6.45 0.00 35.16 2.27
560 561 7.769970 TGATTGAATTTTGAGCTTTCAACCTTT 59.230 29.630 11.66 0.00 40.88 3.11
563 564 7.481275 TTGATTGAATTTTGAGCTTTCAACC 57.519 32.000 11.66 4.30 40.88 3.77
564 565 9.940166 AATTTGATTGAATTTTGAGCTTTCAAC 57.060 25.926 11.66 7.63 40.88 3.18
584 596 3.295785 CACGACGTGCATTTGAATTTGA 58.704 40.909 16.06 0.00 0.00 2.69
585 597 3.669646 CACGACGTGCATTTGAATTTG 57.330 42.857 16.06 0.00 0.00 2.32
597 609 2.738521 CCCTGGAAGCACGACGTG 60.739 66.667 23.43 23.43 36.51 4.49
598 610 4.681978 GCCCTGGAAGCACGACGT 62.682 66.667 0.00 0.00 0.00 4.34
600 612 1.856265 CTTTGCCCTGGAAGCACGAC 61.856 60.000 0.00 0.00 40.69 4.34
601 613 1.600636 CTTTGCCCTGGAAGCACGA 60.601 57.895 0.00 0.00 40.69 4.35
605 617 2.968206 CTGCTTTGCCCTGGAAGC 59.032 61.111 10.72 10.72 46.42 3.86
607 619 2.601367 GGCTGCTTTGCCCTGGAA 60.601 61.111 0.00 0.00 46.82 3.53
692 707 3.914117 TTTCGGGACCGTGTCGCA 61.914 61.111 10.90 5.88 44.10 5.10
880 900 3.680786 TGAGCTGTGTCGTCGGGG 61.681 66.667 0.00 0.00 0.00 5.73
894 914 1.373497 GCCTGTGACTGACCGTGAG 60.373 63.158 0.00 0.00 0.00 3.51
961 981 1.758122 GTCATCAATGGGTGGGGGC 60.758 63.158 0.00 0.00 0.00 5.80
963 983 0.106519 GAGGTCATCAATGGGTGGGG 60.107 60.000 0.00 0.00 0.00 4.96
1084 1114 3.883549 GAGGGAGGGCATGGAGGC 61.884 72.222 0.00 0.00 43.27 4.70
1417 1453 0.482446 AATCCAAGCAGGGGAACACA 59.518 50.000 0.00 0.00 38.09 3.72
1453 1489 2.063266 GACAGAAACGCACGTATTGGA 58.937 47.619 0.00 0.00 0.00 3.53
1491 1527 2.345641 CGCTCGTGGATAAGAGTTTGTG 59.654 50.000 0.00 0.00 35.24 3.33
1509 1545 3.120649 GCTTGAGTAACGATTTCAACGCT 60.121 43.478 0.00 0.00 0.00 5.07
1510 1546 3.153735 GCTTGAGTAACGATTTCAACGC 58.846 45.455 0.00 0.00 0.00 4.84
1511 1547 4.084537 ACTGCTTGAGTAACGATTTCAACG 60.085 41.667 0.00 0.00 30.86 4.10
1512 1548 5.344207 ACTGCTTGAGTAACGATTTCAAC 57.656 39.130 0.00 0.00 30.86 3.18
1513 1549 5.407387 GGTACTGCTTGAGTAACGATTTCAA 59.593 40.000 0.00 0.00 38.96 2.69
1514 1550 4.927425 GGTACTGCTTGAGTAACGATTTCA 59.073 41.667 0.00 0.00 38.96 2.69
1515 1551 5.451828 GGTACTGCTTGAGTAACGATTTC 57.548 43.478 0.00 0.00 38.96 2.17
1585 1623 9.006215 CGAGAGTTGTTAAACAAAACTAAAAGG 57.994 33.333 0.00 0.00 40.15 3.11
1699 1737 5.402997 TCAAATGGCACTATTTTCATGCA 57.597 34.783 0.00 0.00 41.27 3.96
1724 1769 4.785301 TGGGCTCCATTAAGATCTCAAAG 58.215 43.478 0.00 0.00 0.00 2.77
1730 1775 4.630644 TCTCATGGGCTCCATTAAGATC 57.369 45.455 4.15 0.00 42.23 2.75
1785 1832 4.238514 TGTAGCCAACACAACAAACAAAC 58.761 39.130 0.00 0.00 31.43 2.93
1789 1836 4.429108 ACAATGTAGCCAACACAACAAAC 58.571 39.130 0.00 0.00 42.09 2.93
1850 1900 2.557056 TCCCTGAGTATTCGGCTATTCG 59.443 50.000 0.00 0.00 0.00 3.34
1851 1901 3.615351 GCTCCCTGAGTATTCGGCTATTC 60.615 52.174 0.00 0.00 31.39 1.75
1852 1902 2.300437 GCTCCCTGAGTATTCGGCTATT 59.700 50.000 0.00 0.00 31.39 1.73
1853 1903 1.896465 GCTCCCTGAGTATTCGGCTAT 59.104 52.381 0.00 0.00 31.39 2.97
1854 1904 1.133450 AGCTCCCTGAGTATTCGGCTA 60.133 52.381 0.00 0.00 31.39 3.93
1855 1905 0.397816 AGCTCCCTGAGTATTCGGCT 60.398 55.000 0.00 0.00 31.39 5.52
1856 1906 0.032815 GAGCTCCCTGAGTATTCGGC 59.967 60.000 0.87 0.00 31.39 5.54
1857 1907 1.339610 CAGAGCTCCCTGAGTATTCGG 59.660 57.143 10.93 0.00 36.29 4.30
1887 1937 3.393089 AGCCAACACAACAAACAAACA 57.607 38.095 0.00 0.00 0.00 2.83
1978 2036 1.815408 GCCAAGTCCAGAACAGAAGCA 60.815 52.381 0.00 0.00 0.00 3.91
1979 2037 0.877743 GCCAAGTCCAGAACAGAAGC 59.122 55.000 0.00 0.00 0.00 3.86
1980 2038 2.260844 TGCCAAGTCCAGAACAGAAG 57.739 50.000 0.00 0.00 0.00 2.85
2081 2139 4.351874 AAGAATTCAAACGTCTCTCCCA 57.648 40.909 8.44 0.00 0.00 4.37
2102 2160 5.617528 TCTGTTAACTTCCACACCACTTA 57.382 39.130 7.22 0.00 0.00 2.24
2138 2196 9.528018 CCAACACAACAAACAAAATAATAGAGT 57.472 29.630 0.00 0.00 0.00 3.24
2139 2197 8.487176 GCCAACACAACAAACAAAATAATAGAG 58.513 33.333 0.00 0.00 0.00 2.43
2140 2198 8.200792 AGCCAACACAACAAACAAAATAATAGA 58.799 29.630 0.00 0.00 0.00 1.98
2143 2201 7.766278 TGTAGCCAACACAACAAACAAAATAAT 59.234 29.630 0.00 0.00 31.43 1.28
2145 2203 6.631016 TGTAGCCAACACAACAAACAAAATA 58.369 32.000 0.00 0.00 31.43 1.40
2146 2204 5.482908 TGTAGCCAACACAACAAACAAAAT 58.517 33.333 0.00 0.00 31.43 1.82
2187 2247 8.265764 ACTTATAAAAGTGAATGGAGGGAGTAC 58.734 37.037 0.00 0.00 44.40 2.73
2188 2248 8.388656 ACTTATAAAAGTGAATGGAGGGAGTA 57.611 34.615 0.00 0.00 44.40 2.59
2189 2249 7.272144 ACTTATAAAAGTGAATGGAGGGAGT 57.728 36.000 0.00 0.00 44.40 3.85
2190 2250 6.480320 CGACTTATAAAAGTGAATGGAGGGAG 59.520 42.308 0.00 0.00 46.09 4.30
2191 2251 6.070424 ACGACTTATAAAAGTGAATGGAGGGA 60.070 38.462 0.00 0.00 46.09 4.20
2192 2252 6.113411 ACGACTTATAAAAGTGAATGGAGGG 58.887 40.000 0.00 0.00 46.09 4.30
2193 2253 7.611213 AACGACTTATAAAAGTGAATGGAGG 57.389 36.000 0.00 0.00 46.09 4.30
2194 2254 8.717821 TGAAACGACTTATAAAAGTGAATGGAG 58.282 33.333 0.00 0.00 46.09 3.86
2195 2255 8.610248 TGAAACGACTTATAAAAGTGAATGGA 57.390 30.769 0.00 0.00 46.09 3.41
2196 2256 8.717821 TCTGAAACGACTTATAAAAGTGAATGG 58.282 33.333 0.00 0.00 46.09 3.16
2197 2257 9.530129 GTCTGAAACGACTTATAAAAGTGAATG 57.470 33.333 0.00 0.00 46.09 2.67
2198 2258 9.268268 TGTCTGAAACGACTTATAAAAGTGAAT 57.732 29.630 0.00 0.00 46.09 2.57
2199 2259 8.651391 TGTCTGAAACGACTTATAAAAGTGAA 57.349 30.769 0.00 0.00 46.09 3.18
2200 2260 8.651391 TTGTCTGAAACGACTTATAAAAGTGA 57.349 30.769 0.00 0.00 46.09 3.41
2201 2261 8.548721 ACTTGTCTGAAACGACTTATAAAAGTG 58.451 33.333 0.00 0.00 46.09 3.16
2203 2263 8.761497 TCACTTGTCTGAAACGACTTATAAAAG 58.239 33.333 0.00 0.00 38.77 2.27
2204 2264 8.651391 TCACTTGTCTGAAACGACTTATAAAA 57.349 30.769 0.00 0.00 35.00 1.52
2205 2265 8.651391 TTCACTTGTCTGAAACGACTTATAAA 57.349 30.769 0.00 0.00 35.00 1.40
2206 2266 8.651391 TTTCACTTGTCTGAAACGACTTATAA 57.349 30.769 0.00 0.00 35.63 0.98
2207 2267 8.827177 ATTTCACTTGTCTGAAACGACTTATA 57.173 30.769 0.00 0.00 41.76 0.98
2208 2268 7.730364 ATTTCACTTGTCTGAAACGACTTAT 57.270 32.000 0.00 0.00 41.76 1.73
2209 2269 7.279090 TCAATTTCACTTGTCTGAAACGACTTA 59.721 33.333 0.00 0.00 41.76 2.24
2210 2270 6.093495 TCAATTTCACTTGTCTGAAACGACTT 59.907 34.615 0.00 0.00 41.76 3.01
2211 2271 5.584649 TCAATTTCACTTGTCTGAAACGACT 59.415 36.000 0.00 0.00 41.76 4.18
2212 2272 5.806286 TCAATTTCACTTGTCTGAAACGAC 58.194 37.500 0.00 0.00 41.76 4.34
2213 2273 5.504010 GCTCAATTTCACTTGTCTGAAACGA 60.504 40.000 0.00 0.00 41.76 3.85
2214 2274 4.672413 GCTCAATTTCACTTGTCTGAAACG 59.328 41.667 0.00 0.00 41.76 3.60
2215 2275 5.825507 AGCTCAATTTCACTTGTCTGAAAC 58.174 37.500 0.00 0.00 41.76 2.78
2216 2276 7.750229 ATAGCTCAATTTCACTTGTCTGAAA 57.250 32.000 0.00 0.00 42.83 2.69
2217 2277 7.750229 AATAGCTCAATTTCACTTGTCTGAA 57.250 32.000 0.00 0.00 0.00 3.02
2218 2278 7.750229 AAATAGCTCAATTTCACTTGTCTGA 57.250 32.000 0.00 0.00 0.00 3.27
2219 2279 9.334693 GTAAAATAGCTCAATTTCACTTGTCTG 57.665 33.333 0.00 0.00 0.00 3.51
2220 2280 9.066892 TGTAAAATAGCTCAATTTCACTTGTCT 57.933 29.630 0.00 0.00 0.00 3.41
2221 2281 9.334693 CTGTAAAATAGCTCAATTTCACTTGTC 57.665 33.333 0.00 0.00 0.00 3.18
2222 2282 8.850156 ACTGTAAAATAGCTCAATTTCACTTGT 58.150 29.630 0.00 0.00 0.00 3.16
2223 2283 9.121517 CACTGTAAAATAGCTCAATTTCACTTG 57.878 33.333 0.00 0.00 0.00 3.16
2224 2284 8.850156 ACACTGTAAAATAGCTCAATTTCACTT 58.150 29.630 0.00 0.00 0.00 3.16
2225 2285 8.396272 ACACTGTAAAATAGCTCAATTTCACT 57.604 30.769 0.00 0.00 0.00 3.41
2226 2286 8.507249 AGACACTGTAAAATAGCTCAATTTCAC 58.493 33.333 0.00 0.00 0.00 3.18
2227 2287 8.506437 CAGACACTGTAAAATAGCTCAATTTCA 58.494 33.333 0.00 0.00 0.00 2.69
2228 2288 8.721478 TCAGACACTGTAAAATAGCTCAATTTC 58.279 33.333 0.00 0.00 32.61 2.17
2229 2289 8.621532 TCAGACACTGTAAAATAGCTCAATTT 57.378 30.769 0.00 0.00 32.61 1.82
2230 2290 8.621532 TTCAGACACTGTAAAATAGCTCAATT 57.378 30.769 0.00 0.00 32.61 2.32
2231 2291 8.507249 GTTTCAGACACTGTAAAATAGCTCAAT 58.493 33.333 0.00 0.00 32.61 2.57
2232 2292 7.497579 TGTTTCAGACACTGTAAAATAGCTCAA 59.502 33.333 0.00 0.00 32.00 3.02
2233 2293 6.989759 TGTTTCAGACACTGTAAAATAGCTCA 59.010 34.615 0.00 0.00 32.00 4.26
2234 2294 7.421530 TGTTTCAGACACTGTAAAATAGCTC 57.578 36.000 0.00 0.00 32.00 4.09
2235 2295 7.880195 AGATGTTTCAGACACTGTAAAATAGCT 59.120 33.333 0.00 0.00 42.04 3.32
2236 2296 8.034058 AGATGTTTCAGACACTGTAAAATAGC 57.966 34.615 0.00 0.00 42.04 2.97
2238 2298 9.990360 TGTAGATGTTTCAGACACTGTAAAATA 57.010 29.630 0.00 0.00 42.04 1.40
2239 2299 8.902540 TGTAGATGTTTCAGACACTGTAAAAT 57.097 30.769 0.00 0.00 42.04 1.82
2240 2300 8.725405 TTGTAGATGTTTCAGACACTGTAAAA 57.275 30.769 0.00 0.00 42.04 1.52
2241 2301 8.725405 TTTGTAGATGTTTCAGACACTGTAAA 57.275 30.769 0.00 0.00 42.04 2.01
2242 2302 7.042051 GCTTTGTAGATGTTTCAGACACTGTAA 60.042 37.037 0.00 0.00 42.04 2.41
2243 2303 6.423905 GCTTTGTAGATGTTTCAGACACTGTA 59.576 38.462 0.00 0.00 42.04 2.74
2244 2304 5.237344 GCTTTGTAGATGTTTCAGACACTGT 59.763 40.000 0.00 0.00 42.04 3.55
2245 2305 5.334414 GGCTTTGTAGATGTTTCAGACACTG 60.334 44.000 0.00 0.00 42.04 3.66
2246 2306 4.757149 GGCTTTGTAGATGTTTCAGACACT 59.243 41.667 0.00 0.00 42.04 3.55
2247 2307 4.757149 AGGCTTTGTAGATGTTTCAGACAC 59.243 41.667 0.00 0.00 42.04 3.67
2248 2308 4.973168 AGGCTTTGTAGATGTTTCAGACA 58.027 39.130 0.00 0.00 43.71 3.41
2249 2309 5.948992 AAGGCTTTGTAGATGTTTCAGAC 57.051 39.130 0.00 0.00 0.00 3.51
2250 2310 9.733556 TTTATAAGGCTTTGTAGATGTTTCAGA 57.266 29.630 4.45 0.00 0.00 3.27
2255 2315 9.515226 TCACTTTTATAAGGCTTTGTAGATGTT 57.485 29.630 4.45 0.00 35.61 2.71
2256 2316 9.515226 TTCACTTTTATAAGGCTTTGTAGATGT 57.485 29.630 4.45 1.05 35.61 3.06
2257 2317 9.774742 GTTCACTTTTATAAGGCTTTGTAGATG 57.225 33.333 4.45 0.00 35.61 2.90
2258 2318 9.515226 TGTTCACTTTTATAAGGCTTTGTAGAT 57.485 29.630 4.45 0.00 35.61 1.98
2259 2319 8.911918 TGTTCACTTTTATAAGGCTTTGTAGA 57.088 30.769 4.45 0.00 35.61 2.59
2260 2320 8.999431 TCTGTTCACTTTTATAAGGCTTTGTAG 58.001 33.333 4.45 0.00 35.61 2.74
2261 2321 8.911918 TCTGTTCACTTTTATAAGGCTTTGTA 57.088 30.769 4.45 0.00 35.61 2.41
2262 2322 7.040409 CCTCTGTTCACTTTTATAAGGCTTTGT 60.040 37.037 4.45 0.00 35.61 2.83
2263 2323 7.308435 CCTCTGTTCACTTTTATAAGGCTTTG 58.692 38.462 4.45 0.00 35.61 2.77
2264 2324 6.434340 CCCTCTGTTCACTTTTATAAGGCTTT 59.566 38.462 4.45 0.00 35.61 3.51
2265 2325 5.946377 CCCTCTGTTCACTTTTATAAGGCTT 59.054 40.000 4.58 4.58 35.61 4.35
2266 2326 5.250774 TCCCTCTGTTCACTTTTATAAGGCT 59.749 40.000 0.00 0.00 35.61 4.58
2267 2327 5.497474 TCCCTCTGTTCACTTTTATAAGGC 58.503 41.667 0.00 0.00 35.61 4.35
2268 2328 6.712276 ACTCCCTCTGTTCACTTTTATAAGG 58.288 40.000 0.00 0.00 35.61 2.69
2269 2329 8.532819 AGTACTCCCTCTGTTCACTTTTATAAG 58.467 37.037 0.00 0.00 37.40 1.73
2270 2330 8.431910 AGTACTCCCTCTGTTCACTTTTATAA 57.568 34.615 0.00 0.00 0.00 0.98
2271 2331 8.431910 AAGTACTCCCTCTGTTCACTTTTATA 57.568 34.615 0.00 0.00 0.00 0.98
2272 2332 6.936968 AGTACTCCCTCTGTTCACTTTTAT 57.063 37.500 0.00 0.00 0.00 1.40
2273 2333 6.553852 AGAAGTACTCCCTCTGTTCACTTTTA 59.446 38.462 0.00 0.00 0.00 1.52
2274 2334 5.367060 AGAAGTACTCCCTCTGTTCACTTTT 59.633 40.000 0.00 0.00 0.00 2.27
2275 2335 4.902448 AGAAGTACTCCCTCTGTTCACTTT 59.098 41.667 0.00 0.00 0.00 2.66
2276 2336 4.484912 AGAAGTACTCCCTCTGTTCACTT 58.515 43.478 0.00 0.00 0.00 3.16
2277 2337 4.120946 AGAAGTACTCCCTCTGTTCACT 57.879 45.455 0.00 0.00 0.00 3.41
2278 2338 4.875561 AAGAAGTACTCCCTCTGTTCAC 57.124 45.455 0.00 0.00 0.00 3.18
2279 2339 5.365605 TCAAAAGAAGTACTCCCTCTGTTCA 59.634 40.000 0.00 0.00 0.00 3.18
2280 2340 5.855045 TCAAAAGAAGTACTCCCTCTGTTC 58.145 41.667 0.00 0.00 0.00 3.18
2281 2341 5.367060 ACTCAAAAGAAGTACTCCCTCTGTT 59.633 40.000 0.00 0.00 0.00 3.16
2282 2342 4.902448 ACTCAAAAGAAGTACTCCCTCTGT 59.098 41.667 0.00 0.00 0.00 3.41
2283 2343 5.233988 CACTCAAAAGAAGTACTCCCTCTG 58.766 45.833 0.00 0.00 0.00 3.35
2284 2344 4.262678 GCACTCAAAAGAAGTACTCCCTCT 60.263 45.833 0.00 0.00 0.00 3.69
2285 2345 3.997681 GCACTCAAAAGAAGTACTCCCTC 59.002 47.826 0.00 0.00 0.00 4.30
2286 2346 3.648545 AGCACTCAAAAGAAGTACTCCCT 59.351 43.478 0.00 0.00 0.00 4.20
2287 2347 3.748568 CAGCACTCAAAAGAAGTACTCCC 59.251 47.826 0.00 0.00 0.00 4.30
2288 2348 3.187432 GCAGCACTCAAAAGAAGTACTCC 59.813 47.826 0.00 0.00 0.00 3.85
2289 2349 4.061596 AGCAGCACTCAAAAGAAGTACTC 58.938 43.478 0.00 0.00 0.00 2.59
2290 2350 4.061596 GAGCAGCACTCAAAAGAAGTACT 58.938 43.478 0.00 0.00 45.49 2.73
2361 2421 5.146010 AGAACTCAACCATCTTCTCACTC 57.854 43.478 0.00 0.00 0.00 3.51
2495 2555 4.216472 CACAAAAGGTTAGCCTCTTCTTCC 59.784 45.833 0.00 0.00 46.33 3.46
2742 2802 3.726557 TTGATGCCACCTGAAGATTCT 57.273 42.857 0.00 0.00 0.00 2.40
2854 2914 9.567776 AACCAGGAAAAGAAAAAGAAAAAGAAA 57.432 25.926 0.00 0.00 0.00 2.52
2855 2915 9.567776 AAACCAGGAAAAGAAAAAGAAAAAGAA 57.432 25.926 0.00 0.00 0.00 2.52
2856 2916 8.998377 CAAACCAGGAAAAGAAAAAGAAAAAGA 58.002 29.630 0.00 0.00 0.00 2.52
2857 2917 8.998377 TCAAACCAGGAAAAGAAAAAGAAAAAG 58.002 29.630 0.00 0.00 0.00 2.27
2858 2918 8.779303 GTCAAACCAGGAAAAGAAAAAGAAAAA 58.221 29.630 0.00 0.00 0.00 1.94
2859 2919 8.154203 AGTCAAACCAGGAAAAGAAAAAGAAAA 58.846 29.630 0.00 0.00 0.00 2.29
2992 3052 0.762418 ACACCACAGGATCGAACCAA 59.238 50.000 14.80 0.00 0.00 3.67
3055 3115 1.825622 GCAAGTATCTGGGCTGGCC 60.826 63.158 14.23 14.23 0.00 5.36
3319 3379 8.194104 CAGAACTAGAGAAGTATACACAAGCAT 58.806 37.037 5.50 0.00 37.50 3.79
3475 3540 5.963586 GGCGCTACACAACATTTAATTAGTC 59.036 40.000 7.64 0.00 0.00 2.59
3549 3614 6.710295 ACAGCGATGCCTAATTGAACATATAA 59.290 34.615 0.00 0.00 0.00 0.98
3587 3653 7.280205 ACACACACCCGCAAAAATAAATAAAAA 59.720 29.630 0.00 0.00 0.00 1.94
3588 3654 6.761714 ACACACACCCGCAAAAATAAATAAAA 59.238 30.769 0.00 0.00 0.00 1.52
3589 3655 6.281405 ACACACACCCGCAAAAATAAATAAA 58.719 32.000 0.00 0.00 0.00 1.40
3590 3656 5.844004 ACACACACCCGCAAAAATAAATAA 58.156 33.333 0.00 0.00 0.00 1.40
3591 3657 5.455056 ACACACACCCGCAAAAATAAATA 57.545 34.783 0.00 0.00 0.00 1.40
3592 3658 4.329462 ACACACACCCGCAAAAATAAAT 57.671 36.364 0.00 0.00 0.00 1.40
3593 3659 3.802948 ACACACACCCGCAAAAATAAA 57.197 38.095 0.00 0.00 0.00 1.40
3594 3660 3.119101 ACAACACACACCCGCAAAAATAA 60.119 39.130 0.00 0.00 0.00 1.40
3595 3661 2.427453 ACAACACACACCCGCAAAAATA 59.573 40.909 0.00 0.00 0.00 1.40
3596 3662 1.205893 ACAACACACACCCGCAAAAAT 59.794 42.857 0.00 0.00 0.00 1.82
3597 3663 0.603569 ACAACACACACCCGCAAAAA 59.396 45.000 0.00 0.00 0.00 1.94
3598 3664 0.603569 AACAACACACACCCGCAAAA 59.396 45.000 0.00 0.00 0.00 2.44
3599 3665 0.171455 GAACAACACACACCCGCAAA 59.829 50.000 0.00 0.00 0.00 3.68
3600 3666 0.678366 AGAACAACACACACCCGCAA 60.678 50.000 0.00 0.00 0.00 4.85
3601 3667 0.178301 TAGAACAACACACACCCGCA 59.822 50.000 0.00 0.00 0.00 5.69
3602 3668 1.519408 ATAGAACAACACACACCCGC 58.481 50.000 0.00 0.00 0.00 6.13
3603 3669 4.753107 AGTAAATAGAACAACACACACCCG 59.247 41.667 0.00 0.00 0.00 5.28
3604 3670 6.932960 ACTAGTAAATAGAACAACACACACCC 59.067 38.462 0.00 0.00 35.30 4.61
3605 3671 7.958053 ACTAGTAAATAGAACAACACACACC 57.042 36.000 0.00 0.00 35.30 4.16
3609 3675 9.701098 CCAGTAACTAGTAAATAGAACAACACA 57.299 33.333 0.00 0.00 35.30 3.72
3610 3676 9.918630 TCCAGTAACTAGTAAATAGAACAACAC 57.081 33.333 0.00 0.00 35.30 3.32
3722 3871 3.923356 CTCTGCAACTTGCTGCGCG 62.923 63.158 14.78 0.00 45.74 6.86
3725 3874 0.950116 AGAACTCTGCAACTTGCTGC 59.050 50.000 14.78 0.00 45.31 5.25
3786 3935 1.294659 CGGTCCTTCTCAGTGCTTGC 61.295 60.000 0.00 0.00 0.00 4.01
3947 4096 1.376812 CAAACAGGCCCGGGTACTC 60.377 63.158 24.63 9.74 0.00 2.59
4087 4237 1.630369 ACAACCTGCTTAGCCTCATGA 59.370 47.619 0.29 0.00 0.00 3.07
4217 4367 5.221263 ACGGACACACTATTCTACATCATCC 60.221 44.000 0.00 0.00 0.00 3.51
4242 4392 2.099098 CGCCAATTTACAAGATGGGGAC 59.901 50.000 1.88 0.00 45.75 4.46
4323 4494 1.002468 CAGCAACAAAACAGGTCCTCG 60.002 52.381 0.00 0.00 0.00 4.63
4403 4594 6.913873 TGACTAAACCACAGTAAACAAGTC 57.086 37.500 0.00 0.00 33.20 3.01
4592 5406 1.260544 AAAATGCCTGTGCCTTCCTC 58.739 50.000 0.00 0.00 36.33 3.71
4599 5413 5.733226 AAGTTGTTTAAAAATGCCTGTGC 57.267 34.783 0.00 0.00 38.26 4.57
4621 5435 7.078011 TGCGTTTATCACATTTACATGCTTA 57.922 32.000 0.00 0.00 33.05 3.09
4639 5456 4.578928 AGACTTTTAGGTCAACATGCGTTT 59.421 37.500 0.00 0.00 38.57 3.60
4642 5459 3.667960 GCAGACTTTTAGGTCAACATGCG 60.668 47.826 0.00 0.00 38.57 4.73
4657 5474 1.000274 GCGTTTTTGGATGGCAGACTT 60.000 47.619 0.00 0.00 0.00 3.01
4681 5499 3.939740 ATGCCTCTCTTCCTTTGCATA 57.060 42.857 0.00 0.00 37.65 3.14
4698 5516 6.308766 GTGACTGTTACAATGAAATCCAATGC 59.691 38.462 0.00 0.00 0.00 3.56
4727 5562 0.991920 TTACCCCAAGGAGCAAGGAG 59.008 55.000 0.00 0.00 36.73 3.69
4728 5563 0.991920 CTTACCCCAAGGAGCAAGGA 59.008 55.000 0.00 0.00 36.73 3.36
4729 5564 0.681243 GCTTACCCCAAGGAGCAAGG 60.681 60.000 0.00 0.00 36.73 3.61
4732 5567 0.328258 GAAGCTTACCCCAAGGAGCA 59.672 55.000 0.00 0.00 36.73 4.26
4733 5568 0.328258 TGAAGCTTACCCCAAGGAGC 59.672 55.000 0.00 0.00 36.73 4.70
4734 5569 1.630878 AGTGAAGCTTACCCCAAGGAG 59.369 52.381 0.00 0.00 36.73 3.69
4735 5570 1.742308 AGTGAAGCTTACCCCAAGGA 58.258 50.000 0.00 0.00 36.73 3.36
4736 5571 3.933861 ATAGTGAAGCTTACCCCAAGG 57.066 47.619 0.00 0.00 34.56 3.61
4737 5572 5.163754 CGAAAATAGTGAAGCTTACCCCAAG 60.164 44.000 0.00 0.00 37.31 3.61
4738 5573 4.698304 CGAAAATAGTGAAGCTTACCCCAA 59.302 41.667 0.00 0.00 0.00 4.12
4739 5574 4.258543 CGAAAATAGTGAAGCTTACCCCA 58.741 43.478 0.00 0.00 0.00 4.96
4740 5575 3.064958 GCGAAAATAGTGAAGCTTACCCC 59.935 47.826 0.00 0.00 0.00 4.95
4741 5576 3.939592 AGCGAAAATAGTGAAGCTTACCC 59.060 43.478 0.00 0.00 0.00 3.69
4742 5577 5.324697 CAAGCGAAAATAGTGAAGCTTACC 58.675 41.667 0.00 0.00 42.18 2.85
4743 5578 4.788609 GCAAGCGAAAATAGTGAAGCTTAC 59.211 41.667 0.00 0.00 42.18 2.34
4744 5579 4.695455 AGCAAGCGAAAATAGTGAAGCTTA 59.305 37.500 0.00 0.00 42.18 3.09
4745 5580 3.503748 AGCAAGCGAAAATAGTGAAGCTT 59.496 39.130 0.00 0.00 44.50 3.74
4746 5581 3.077359 AGCAAGCGAAAATAGTGAAGCT 58.923 40.909 0.00 0.00 36.40 3.74
4747 5582 3.477899 AGCAAGCGAAAATAGTGAAGC 57.522 42.857 0.00 0.00 0.00 3.86
4748 5583 6.408858 TCTTAGCAAGCGAAAATAGTGAAG 57.591 37.500 0.00 0.00 0.00 3.02
4801 5636 4.343526 TGAGCACCCAAGAATTAGCAAAAA 59.656 37.500 0.00 0.00 0.00 1.94
4805 6255 2.877097 TGAGCACCCAAGAATTAGCA 57.123 45.000 0.00 0.00 0.00 3.49
4826 6276 6.094325 TGCGTAATTTGAGGTTATCGGAAAAT 59.906 34.615 0.00 0.00 0.00 1.82
4832 6282 7.173863 AGTAATGCGTAATTTGAGGTTATCG 57.826 36.000 0.00 0.00 0.00 2.92
4841 7519 7.327275 TGGTTTGCTAAAGTAATGCGTAATTTG 59.673 33.333 3.67 0.00 32.48 2.32
4848 7526 4.562394 CCAATGGTTTGCTAAAGTAATGCG 59.438 41.667 0.00 0.00 0.00 4.73
4854 7532 7.823799 CCAAAATATCCAATGGTTTGCTAAAGT 59.176 33.333 0.00 0.00 0.00 2.66
4874 7552 8.257602 AGGGAGTATTGTTTACAAACCAAAAT 57.742 30.769 0.00 0.00 39.55 1.82
4878 7556 5.318630 GGAGGGAGTATTGTTTACAAACCA 58.681 41.667 0.00 0.00 39.55 3.67
4895 7573 2.084089 TATATCACGGGGCGGAGGGA 62.084 60.000 0.00 0.00 0.00 4.20
4896 7574 1.189524 TTATATCACGGGGCGGAGGG 61.190 60.000 0.00 0.00 0.00 4.30
4897 7575 0.246635 CTTATATCACGGGGCGGAGG 59.753 60.000 0.00 0.00 0.00 4.30
4898 7576 1.067776 GTCTTATATCACGGGGCGGAG 60.068 57.143 0.00 0.00 0.00 4.63
4899 7577 0.963962 GTCTTATATCACGGGGCGGA 59.036 55.000 0.00 0.00 0.00 5.54
4900 7578 0.388134 CGTCTTATATCACGGGGCGG 60.388 60.000 0.00 0.00 32.19 6.13
4901 7579 0.313043 ACGTCTTATATCACGGGGCG 59.687 55.000 8.40 0.00 40.43 6.13
4902 7580 2.521105 AACGTCTTATATCACGGGGC 57.479 50.000 8.40 0.00 40.43 5.80
4903 7581 5.811613 TGTAAAAACGTCTTATATCACGGGG 59.188 40.000 8.40 0.00 40.43 5.73
4904 7582 6.019318 CCTGTAAAAACGTCTTATATCACGGG 60.019 42.308 8.40 0.00 40.43 5.28
4905 7583 6.509039 GCCTGTAAAAACGTCTTATATCACGG 60.509 42.308 8.40 0.00 40.43 4.94
4906 7584 6.255020 AGCCTGTAAAAACGTCTTATATCACG 59.745 38.462 0.00 3.12 41.90 4.35
4907 7585 7.535489 AGCCTGTAAAAACGTCTTATATCAC 57.465 36.000 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.