Multiple sequence alignment - TraesCS1B01G278600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G278600 chr1B 100.000 5052 0 0 3077 8128 486973381 486968330 0.000000e+00 9330.0
1 TraesCS1B01G278600 chr1B 100.000 2628 0 0 1 2628 486976457 486973830 0.000000e+00 4854.0
2 TraesCS1B01G278600 chr1B 95.918 49 2 0 2002 2050 354987532 354987484 6.760000e-11 80.5
3 TraesCS1B01G278600 chr1B 87.931 58 5 2 7620 7676 522622848 522622904 5.260000e-07 67.6
4 TraesCS1B01G278600 chr1B 86.538 52 7 0 1 52 331725233 331725182 3.170000e-04 58.4
5 TraesCS1B01G278600 chr1A 91.085 5003 299 74 3173 8128 462797697 462792795 0.000000e+00 6632.0
6 TraesCS1B01G278600 chr1A 87.889 2056 96 56 150 2133 462800462 462798488 0.000000e+00 2276.0
7 TraesCS1B01G278600 chr1A 92.208 308 24 0 2318 2625 462798384 462798077 3.480000e-118 436.0
8 TraesCS1B01G278600 chr1A 84.472 161 24 1 2265 2424 139641993 139642153 3.040000e-34 158.0
9 TraesCS1B01G278600 chr1A 81.034 116 19 3 2177 2289 462798501 462798386 1.120000e-13 89.8
10 TraesCS1B01G278600 chr1A 92.593 54 3 1 7625 7678 490503950 490503898 8.750000e-10 76.8
11 TraesCS1B01G278600 chr1D 91.056 4394 260 57 3139 7506 363727137 363722851 0.000000e+00 5814.0
12 TraesCS1B01G278600 chr1D 89.913 2657 141 45 1 2613 363730009 363727436 0.000000e+00 3304.0
13 TraesCS1B01G278600 chr1D 84.091 396 59 4 7676 8069 363722850 363722457 5.950000e-101 379.0
14 TraesCS1B01G278600 chr1D 95.745 47 2 0 2002 2048 258091961 258092007 8.750000e-10 76.8
15 TraesCS1B01G278600 chr1D 90.909 55 4 1 7624 7678 86096965 86096912 1.130000e-08 73.1
16 TraesCS1B01G278600 chr6B 84.259 2179 191 66 4648 6789 57712649 57710586 0.000000e+00 1984.0
17 TraesCS1B01G278600 chr6B 88.069 461 40 8 1051 1506 57713557 57713107 4.320000e-147 532.0
18 TraesCS1B01G278600 chr6B 83.178 321 37 4 4342 4650 57713047 57712732 2.230000e-70 278.0
19 TraesCS1B01G278600 chr3A 82.154 325 58 0 4648 4972 527840026 527839702 6.210000e-71 279.0
20 TraesCS1B01G278600 chr3B 82.637 311 54 0 4648 4958 531212338 531212028 8.040000e-70 276.0
21 TraesCS1B01G278600 chr3B 90.476 63 4 2 2004 2065 540729769 540729708 1.880000e-11 82.4
22 TraesCS1B01G278600 chr3D 81.538 325 60 0 4648 4972 405310039 405309715 1.340000e-67 268.0
23 TraesCS1B01G278600 chr3D 92.308 52 2 2 7627 7678 427021330 427021281 1.130000e-08 73.1
24 TraesCS1B01G278600 chr7B 77.178 482 95 14 7626 8099 136003854 136003380 4.840000e-67 267.0
25 TraesCS1B01G278600 chr7B 92.593 54 3 1 7625 7678 79369733 79369785 8.750000e-10 76.8
26 TraesCS1B01G278600 chrUn 79.481 385 69 6 4593 4972 276463259 276462880 1.740000e-66 265.0
27 TraesCS1B01G278600 chrUn 79.481 385 69 6 4593 4972 276527247 276527626 1.740000e-66 265.0
28 TraesCS1B01G278600 chrUn 79.481 385 69 6 4593 4972 295905924 295906303 1.740000e-66 265.0
29 TraesCS1B01G278600 chrUn 77.536 138 28 3 1317 1454 276463593 276463459 6.760000e-11 80.5
30 TraesCS1B01G278600 chrUn 77.536 138 28 3 1317 1454 276526913 276527047 6.760000e-11 80.5
31 TraesCS1B01G278600 chrUn 77.536 138 28 3 1317 1454 295905590 295905724 6.760000e-11 80.5
32 TraesCS1B01G278600 chr5D 97.826 46 1 0 2004 2049 553674824 553674779 6.760000e-11 80.5
33 TraesCS1B01G278600 chr5D 91.667 48 4 0 2004 2051 454409567 454409614 5.260000e-07 67.6
34 TraesCS1B01G278600 chr2D 94.340 53 2 1 7626 7678 152099663 152099714 6.760000e-11 80.5
35 TraesCS1B01G278600 chr2D 76.812 138 29 3 1317 1454 437947762 437947896 3.150000e-09 75.0
36 TraesCS1B01G278600 chr7D 94.000 50 1 2 7629 7678 104684830 104684877 3.150000e-09 75.0
37 TraesCS1B01G278600 chr4A 86.765 68 6 3 2000 2065 25026407 25026473 1.130000e-08 73.1
38 TraesCS1B01G278600 chr2A 83.871 62 8 1 2 63 554992456 554992515 3.170000e-04 58.4
39 TraesCS1B01G278600 chr7A 86.275 51 7 0 2 52 390753972 390753922 1.000000e-03 56.5
40 TraesCS1B01G278600 chr7A 86.275 51 7 0 2 52 542338944 542338994 1.000000e-03 56.5
41 TraesCS1B01G278600 chr6D 86.275 51 7 0 2 52 233225004 233224954 1.000000e-03 56.5
42 TraesCS1B01G278600 chr5B 88.889 45 5 0 2001 2045 233695440 233695484 1.000000e-03 56.5
43 TraesCS1B01G278600 chr5B 100.000 28 0 0 25 52 194752444 194752417 1.500000e-02 52.8
44 TraesCS1B01G278600 chr5A 84.615 52 8 0 1 52 335123425 335123476 1.500000e-02 52.8
45 TraesCS1B01G278600 chr5A 84.615 52 8 0 1 52 393840716 393840767 1.500000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G278600 chr1B 486968330 486976457 8127 True 7092.000000 9330 100.000000 1 8128 2 chr1B.!!$R3 8127
1 TraesCS1B01G278600 chr1A 462792795 462800462 7667 True 2358.450000 6632 88.054000 150 8128 4 chr1A.!!$R2 7978
2 TraesCS1B01G278600 chr1D 363722457 363730009 7552 True 3165.666667 5814 88.353333 1 8069 3 chr1D.!!$R2 8068
3 TraesCS1B01G278600 chr6B 57710586 57713557 2971 True 931.333333 1984 85.168667 1051 6789 3 chr6B.!!$R1 5738

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
907 952 0.189080 TTCGATCCTCCCCGGGATTA 59.811 55.0 26.32 5.94 45.18 1.75 F
987 1049 0.319900 TGAGGCAGCTCTTGTTCGAC 60.320 55.0 0.00 0.00 0.00 4.20 F
2123 2227 0.810648 GTTCATGCCAAAGCGATGGA 59.189 50.0 14.18 1.22 43.54 3.41 F
3487 3594 0.037975 CATGTCAAGCAACCCAAGCC 60.038 55.0 0.00 0.00 0.00 4.35 F
3488 3595 0.469705 ATGTCAAGCAACCCAAGCCA 60.470 50.0 0.00 0.00 0.00 4.75 F
3489 3596 0.469705 TGTCAAGCAACCCAAGCCAT 60.470 50.0 0.00 0.00 0.00 4.40 F
3490 3597 0.681175 GTCAAGCAACCCAAGCCATT 59.319 50.0 0.00 0.00 0.00 3.16 F
4097 4204 0.937304 GCAAAACACGAGCACTCTGA 59.063 50.0 0.00 0.00 0.00 3.27 F
5625 5873 0.110486 GGTCGATGCCCCCATGTTAT 59.890 55.0 0.00 0.00 0.00 1.89 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1789 1889 0.042131 ACGGGGGTCAAGTCTGGATA 59.958 55.000 0.00 0.0 0.00 2.59 R
2311 2417 0.323360 TGTTGGTTGCATAGGGCTCC 60.323 55.000 0.00 0.0 45.15 4.70 R
4026 4133 0.107268 ACGCGGTTTAGTTTGGGTCT 59.893 50.000 12.47 0.0 0.00 3.85 R
4908 5127 0.612744 TGGTCATGTTGCCGATGAGA 59.387 50.000 0.00 0.0 30.39 3.27 R
5012 5260 9.657419 ACAAATGAAAAGAAAATCAACTCAACT 57.343 25.926 0.00 0.0 0.00 3.16 R
5542 5790 0.325577 TGCTCTGCATGACCTCCCTA 60.326 55.000 0.00 0.0 31.71 3.53 R
5599 5847 1.605453 GGGGCATCGACCAACCTTA 59.395 57.895 0.00 0.0 27.52 2.69 R
5651 5917 0.870393 GCCACATCTGACACACACAG 59.130 55.000 0.00 0.0 36.80 3.66 R
7370 7701 0.404040 AAGGCCGATTTCCAAGTCCA 59.596 50.000 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.131046 AGGGTTACAAGTATTACGGACCG 59.869 47.826 13.61 13.61 0.00 4.79
35 36 1.784856 CAAGTATTACGGACCGCATCG 59.215 52.381 15.39 0.00 0.00 3.84
88 89 2.718731 CCGAGTGGAGCGCTAGAG 59.281 66.667 11.50 0.00 37.49 2.43
90 91 1.820056 CGAGTGGAGCGCTAGAGGA 60.820 63.158 11.50 0.00 0.00 3.71
91 92 1.731093 GAGTGGAGCGCTAGAGGAC 59.269 63.158 11.50 2.49 0.00 3.85
92 93 0.750182 GAGTGGAGCGCTAGAGGACT 60.750 60.000 11.50 7.99 0.00 3.85
93 94 0.750182 AGTGGAGCGCTAGAGGACTC 60.750 60.000 11.50 0.00 0.00 3.36
94 95 1.820056 TGGAGCGCTAGAGGACTCG 60.820 63.158 11.50 0.00 34.09 4.18
132 134 2.397597 ACCAAACCAACCAAGAATGCT 58.602 42.857 0.00 0.00 0.00 3.79
141 143 3.733443 ACCAAGAATGCTGAACCAAAC 57.267 42.857 0.00 0.00 0.00 2.93
142 144 3.299503 ACCAAGAATGCTGAACCAAACT 58.700 40.909 0.00 0.00 0.00 2.66
143 145 4.469657 ACCAAGAATGCTGAACCAAACTA 58.530 39.130 0.00 0.00 0.00 2.24
148 150 4.460382 AGAATGCTGAACCAAACTACATGG 59.540 41.667 0.00 0.00 43.84 3.66
226 228 4.098807 GTGTCAGCCCCAAAACTAGAAAAA 59.901 41.667 0.00 0.00 0.00 1.94
258 260 2.496899 AATTCCCAACAGCGTCATCT 57.503 45.000 0.00 0.00 0.00 2.90
285 287 5.796935 CGTGATAAACATGGAGAAGCAAAAG 59.203 40.000 0.00 0.00 32.38 2.27
455 460 2.897350 GCGAGGTAGGCATGGCAC 60.897 66.667 22.64 16.24 30.63 5.01
484 500 3.399181 GGACCCGGGCATCACTCA 61.399 66.667 24.08 0.00 0.00 3.41
487 503 2.819595 CCCGGGCATCACTCAACG 60.820 66.667 8.08 0.00 0.00 4.10
540 580 1.888436 GAGATCACTGTCACGGCCCA 61.888 60.000 0.00 0.00 0.00 5.36
553 593 0.250234 CGGCCCAGTGAATTCTCTCA 59.750 55.000 7.06 0.00 0.00 3.27
603 644 1.880894 CACTCGTCGCTAGGGAACA 59.119 57.895 11.59 0.00 0.00 3.18
616 657 1.638467 GGAACATCTGCATCGACGC 59.362 57.895 0.00 0.00 0.00 5.19
628 669 2.849096 ATCGACGCACCAGGGGTAGA 62.849 60.000 0.00 0.00 45.38 2.59
629 670 2.893398 GACGCACCAGGGGTAGAG 59.107 66.667 0.00 0.00 43.60 2.43
630 671 3.372554 GACGCACCAGGGGTAGAGC 62.373 68.421 0.00 0.00 43.60 4.09
631 672 4.162690 CGCACCAGGGGTAGAGCC 62.163 72.222 0.00 0.00 32.11 4.70
632 673 4.162690 GCACCAGGGGTAGAGCCG 62.163 72.222 0.00 0.00 38.44 5.52
633 674 2.683933 CACCAGGGGTAGAGCCGT 60.684 66.667 0.00 0.00 38.44 5.68
634 675 1.380785 CACCAGGGGTAGAGCCGTA 60.381 63.158 0.00 0.00 38.44 4.02
635 676 1.076192 ACCAGGGGTAGAGCCGTAG 60.076 63.158 0.00 0.00 38.44 3.51
710 755 4.946157 GCTCTGCATATATACTGGCCAAAT 59.054 41.667 7.01 6.16 0.00 2.32
744 789 0.813610 CGTGTGCCTGGTCACTTTCA 60.814 55.000 17.81 0.77 37.81 2.69
798 843 9.067986 CATTATTGATGGATCCATGGATAGATG 57.932 37.037 32.05 23.00 36.70 2.90
805 850 1.918262 TCCATGGATAGATGGATGCCC 59.082 52.381 11.44 0.00 45.85 5.36
806 851 1.064166 CCATGGATAGATGGATGCCCC 60.064 57.143 5.56 0.00 45.24 5.80
807 852 0.914644 ATGGATAGATGGATGCCCCG 59.085 55.000 0.00 0.00 37.93 5.73
808 853 1.078143 GGATAGATGGATGCCCCGC 60.078 63.158 0.00 0.00 37.93 6.13
809 854 1.078143 GATAGATGGATGCCCCGCC 60.078 63.158 0.00 0.00 37.93 6.13
810 855 1.841302 GATAGATGGATGCCCCGCCA 61.841 60.000 0.00 0.00 38.78 5.69
811 856 1.845627 ATAGATGGATGCCCCGCCAG 61.846 60.000 0.00 0.00 37.64 4.85
873 918 1.377333 CCCCTGCCTTTCTCGGTTC 60.377 63.158 0.00 0.00 0.00 3.62
877 922 1.825474 CCTGCCTTTCTCGGTTCTCTA 59.175 52.381 0.00 0.00 0.00 2.43
878 923 2.233922 CCTGCCTTTCTCGGTTCTCTAA 59.766 50.000 0.00 0.00 0.00 2.10
879 924 3.118592 CCTGCCTTTCTCGGTTCTCTAAT 60.119 47.826 0.00 0.00 0.00 1.73
881 926 4.504858 TGCCTTTCTCGGTTCTCTAATTC 58.495 43.478 0.00 0.00 0.00 2.17
882 927 4.223032 TGCCTTTCTCGGTTCTCTAATTCT 59.777 41.667 0.00 0.00 0.00 2.40
883 928 4.806775 GCCTTTCTCGGTTCTCTAATTCTC 59.193 45.833 0.00 0.00 0.00 2.87
884 929 5.394773 GCCTTTCTCGGTTCTCTAATTCTCT 60.395 44.000 0.00 0.00 0.00 3.10
887 932 5.838531 TCTCGGTTCTCTAATTCTCTTCC 57.161 43.478 0.00 0.00 0.00 3.46
888 933 5.511363 TCTCGGTTCTCTAATTCTCTTCCT 58.489 41.667 0.00 0.00 0.00 3.36
889 934 5.952947 TCTCGGTTCTCTAATTCTCTTCCTT 59.047 40.000 0.00 0.00 0.00 3.36
891 936 5.038033 CGGTTCTCTAATTCTCTTCCTTCG 58.962 45.833 0.00 0.00 0.00 3.79
893 938 6.460399 CGGTTCTCTAATTCTCTTCCTTCGAT 60.460 42.308 0.00 0.00 0.00 3.59
894 939 6.921307 GGTTCTCTAATTCTCTTCCTTCGATC 59.079 42.308 0.00 0.00 0.00 3.69
895 940 6.642707 TCTCTAATTCTCTTCCTTCGATCC 57.357 41.667 0.00 0.00 0.00 3.36
896 941 6.369629 TCTCTAATTCTCTTCCTTCGATCCT 58.630 40.000 0.00 0.00 0.00 3.24
897 942 6.488683 TCTCTAATTCTCTTCCTTCGATCCTC 59.511 42.308 0.00 0.00 0.00 3.71
898 943 4.681074 AATTCTCTTCCTTCGATCCTCC 57.319 45.455 0.00 0.00 0.00 4.30
899 944 2.074729 TCTCTTCCTTCGATCCTCCC 57.925 55.000 0.00 0.00 0.00 4.30
900 945 1.044611 CTCTTCCTTCGATCCTCCCC 58.955 60.000 0.00 0.00 0.00 4.81
901 946 0.755698 TCTTCCTTCGATCCTCCCCG 60.756 60.000 0.00 0.00 0.00 5.73
902 947 1.749334 CTTCCTTCGATCCTCCCCGG 61.749 65.000 0.00 0.00 0.00 5.73
904 949 2.123425 CTTCGATCCTCCCCGGGA 60.123 66.667 26.32 5.87 39.95 5.14
906 951 1.074775 TTCGATCCTCCCCGGGATT 60.075 57.895 26.32 0.27 45.18 3.01
907 952 0.189080 TTCGATCCTCCCCGGGATTA 59.811 55.000 26.32 5.94 45.18 1.75
908 953 0.412244 TCGATCCTCCCCGGGATTAT 59.588 55.000 26.32 9.89 45.18 1.28
909 954 0.824759 CGATCCTCCCCGGGATTATC 59.175 60.000 26.32 17.40 45.18 1.75
910 955 1.619977 CGATCCTCCCCGGGATTATCT 60.620 57.143 26.32 0.73 45.18 1.98
911 956 2.552367 GATCCTCCCCGGGATTATCTT 58.448 52.381 26.32 0.00 45.18 2.40
912 957 3.721021 GATCCTCCCCGGGATTATCTTA 58.279 50.000 26.32 0.00 45.18 2.10
950 995 2.982470 GTGTGTAAGCAGTGTACGTACC 59.018 50.000 22.43 13.64 0.00 3.34
952 997 4.071423 TGTGTAAGCAGTGTACGTACCTA 58.929 43.478 22.43 2.22 0.00 3.08
962 1007 2.876955 CGTACCTACGTTGCCGGA 59.123 61.111 5.05 0.00 44.13 5.14
963 1008 1.226491 CGTACCTACGTTGCCGGAG 60.226 63.158 5.05 0.00 45.04 4.63
981 1043 2.553086 GAGAGATTGAGGCAGCTCTTG 58.447 52.381 0.00 0.00 37.81 3.02
986 1048 0.392706 TTGAGGCAGCTCTTGTTCGA 59.607 50.000 0.00 0.00 0.00 3.71
987 1049 0.319900 TGAGGCAGCTCTTGTTCGAC 60.320 55.000 0.00 0.00 0.00 4.20
988 1050 1.347817 GAGGCAGCTCTTGTTCGACG 61.348 60.000 0.00 0.00 0.00 5.12
989 1051 2.383527 GGCAGCTCTTGTTCGACGG 61.384 63.158 0.00 0.00 0.00 4.79
990 1052 2.383527 GCAGCTCTTGTTCGACGGG 61.384 63.158 0.00 0.00 0.00 5.28
991 1053 1.289066 CAGCTCTTGTTCGACGGGA 59.711 57.895 0.00 0.00 0.00 5.14
1015 1077 2.421107 GGAGCAATGAAGATCTCCAGCA 60.421 50.000 0.00 0.00 43.42 4.41
1018 1080 3.118000 AGCAATGAAGATCTCCAGCATCA 60.118 43.478 0.00 0.00 0.00 3.07
1024 1086 2.117051 AGATCTCCAGCATCAAGAGCA 58.883 47.619 0.00 0.00 0.00 4.26
1226 1288 1.937191 TACAGGTGAGACATGAGGCA 58.063 50.000 0.00 0.00 33.56 4.75
1262 1330 1.677052 CCTGCTACTCCTCCGTCTTAC 59.323 57.143 0.00 0.00 0.00 2.34
1551 1632 1.400113 CGTACGTGCTACCTTGTTCGA 60.400 52.381 7.22 0.00 0.00 3.71
1590 1674 3.149196 TCTTCCTTGGAGTTGCATGAAC 58.851 45.455 0.00 0.00 34.40 3.18
1620 1704 4.072131 AGTTAGTTGTGCATGTTACCCAG 58.928 43.478 0.00 0.00 0.00 4.45
1640 1725 5.423610 CCCAGTTCTCTCCTCTCATTTTCTA 59.576 44.000 0.00 0.00 0.00 2.10
1659 1754 7.403312 TTTCTACCCAAATGAACATGGTATG 57.597 36.000 0.00 0.00 34.79 2.39
1660 1755 5.445069 TCTACCCAAATGAACATGGTATGG 58.555 41.667 0.00 0.00 34.79 2.74
1662 1757 2.102925 CCCAAATGAACATGGTATGGGC 59.897 50.000 9.67 0.00 39.57 5.36
1663 1758 2.765135 CCAAATGAACATGGTATGGGCA 59.235 45.455 0.00 0.00 33.60 5.36
1664 1759 3.197333 CCAAATGAACATGGTATGGGCAA 59.803 43.478 0.00 0.00 33.60 4.52
1665 1760 4.435425 CAAATGAACATGGTATGGGCAAG 58.565 43.478 0.00 0.00 33.60 4.01
1666 1761 3.668141 ATGAACATGGTATGGGCAAGA 57.332 42.857 0.00 0.00 33.60 3.02
1667 1762 3.668141 TGAACATGGTATGGGCAAGAT 57.332 42.857 0.00 0.00 33.60 2.40
1668 1763 4.787135 TGAACATGGTATGGGCAAGATA 57.213 40.909 0.00 0.00 33.60 1.98
1669 1764 5.323382 TGAACATGGTATGGGCAAGATAT 57.677 39.130 0.00 0.00 33.60 1.63
1683 1778 6.097981 TGGGCAAGATATATGCATGTTTTCAA 59.902 34.615 10.16 0.00 45.60 2.69
1695 1790 4.507388 GCATGTTTTCAAGCAAGTAAAGCA 59.493 37.500 0.00 0.00 43.03 3.91
1738 1833 8.931385 AAACATAATGTTATCATGCAAAGTCC 57.069 30.769 0.00 0.00 40.14 3.85
1749 1844 7.643569 ATCATGCAAAGTCCACATAATGTTA 57.356 32.000 0.00 0.00 0.00 2.41
1788 1888 2.415168 GTGGGTGTGTTGTCATGTATCG 59.585 50.000 0.00 0.00 0.00 2.92
1789 1889 2.037902 TGGGTGTGTTGTCATGTATCGT 59.962 45.455 0.00 0.00 0.00 3.73
1790 1890 3.258622 TGGGTGTGTTGTCATGTATCGTA 59.741 43.478 0.00 0.00 0.00 3.43
1791 1891 4.081365 TGGGTGTGTTGTCATGTATCGTAT 60.081 41.667 0.00 0.00 0.00 3.06
1792 1892 4.506654 GGGTGTGTTGTCATGTATCGTATC 59.493 45.833 0.00 0.00 0.00 2.24
1795 1895 5.232202 GTGTGTTGTCATGTATCGTATCCAG 59.768 44.000 0.00 0.00 0.00 3.86
1852 1952 1.335496 GATGCGGCGGCCTAATTTTTA 59.665 47.619 18.34 0.00 38.85 1.52
1853 1953 1.394618 TGCGGCGGCCTAATTTTTAT 58.605 45.000 18.34 0.00 38.85 1.40
1862 1962 5.280945 CGGCCTAATTTTTATGTGGTGATG 58.719 41.667 0.00 0.00 0.00 3.07
1865 1965 5.163416 GCCTAATTTTTATGTGGTGATGGCT 60.163 40.000 0.00 0.00 0.00 4.75
1898 1998 6.326064 AGAGATATTGTGCATCTTACTCCTGT 59.674 38.462 0.00 0.00 32.86 4.00
1973 2073 6.317789 TCTGGTATTAGCAATTTAGCATGC 57.682 37.500 10.51 10.51 42.87 4.06
2011 2111 3.418684 TGCCAACTTTTCTACTCCCTC 57.581 47.619 0.00 0.00 0.00 4.30
2012 2112 2.979678 TGCCAACTTTTCTACTCCCTCT 59.020 45.455 0.00 0.00 0.00 3.69
2068 2170 9.280174 CAACTTTAAGGAGTAGTTGTATTTCCA 57.720 33.333 8.27 0.00 42.24 3.53
2073 2177 6.636454 AGGAGTAGTTGTATTTCCAATCCA 57.364 37.500 0.00 0.00 0.00 3.41
2081 2185 5.247507 TGTATTTCCAATCCAGAATTGCG 57.752 39.130 0.00 0.00 42.96 4.85
2118 2222 2.917701 TATGTGTTCATGCCAAAGCG 57.082 45.000 0.00 0.00 44.31 4.68
2123 2227 0.810648 GTTCATGCCAAAGCGATGGA 59.189 50.000 14.18 1.22 43.54 3.41
2137 2241 3.767673 AGCGATGGACAAGGTAGTAAGAA 59.232 43.478 0.00 0.00 0.00 2.52
2184 2288 8.757307 AAGGACCTCTATGATATATGGGAAAA 57.243 34.615 0.00 0.00 0.00 2.29
2201 2305 8.837099 ATGGGAAAATTGTTCTATGTATCCAA 57.163 30.769 0.00 0.00 0.00 3.53
2204 2308 7.700656 GGGAAAATTGTTCTATGTATCCAAACG 59.299 37.037 0.00 0.00 0.00 3.60
2205 2309 8.455682 GGAAAATTGTTCTATGTATCCAAACGA 58.544 33.333 0.00 0.00 0.00 3.85
2206 2310 9.834628 GAAAATTGTTCTATGTATCCAAACGAA 57.165 29.630 0.00 0.00 0.00 3.85
2211 2315 7.680982 TGTTCTATGTATCCAAACGAAAATCG 58.319 34.615 0.00 0.00 46.93 3.34
2212 2316 6.838198 TCTATGTATCCAAACGAAAATCGG 57.162 37.500 4.66 0.00 45.59 4.18
2214 2318 2.420722 TGTATCCAAACGAAAATCGGGC 59.579 45.455 4.66 0.00 45.59 6.13
2215 2319 1.540267 ATCCAAACGAAAATCGGGCA 58.460 45.000 4.66 0.00 45.59 5.36
2216 2320 1.540267 TCCAAACGAAAATCGGGCAT 58.460 45.000 4.66 0.00 45.59 4.40
2217 2321 2.712709 TCCAAACGAAAATCGGGCATA 58.287 42.857 4.66 0.00 45.59 3.14
2219 2323 3.119779 TCCAAACGAAAATCGGGCATAAC 60.120 43.478 4.66 0.00 45.59 1.89
2220 2324 3.366476 CCAAACGAAAATCGGGCATAACA 60.366 43.478 4.66 0.00 45.59 2.41
2221 2325 4.420168 CAAACGAAAATCGGGCATAACAT 58.580 39.130 4.66 0.00 45.59 2.71
2222 2326 3.691049 ACGAAAATCGGGCATAACATG 57.309 42.857 4.66 0.00 45.59 3.21
2226 2332 5.163561 ACGAAAATCGGGCATAACATGAATT 60.164 36.000 0.00 0.00 45.59 2.17
2227 2333 5.399301 CGAAAATCGGGCATAACATGAATTC 59.601 40.000 0.00 0.00 36.00 2.17
2247 2353 9.624697 TGAATTCTTTTTATTTGTGAGGAATCG 57.375 29.630 7.05 0.00 0.00 3.34
2302 2408 6.320171 CAATCAGCCATTACAAGACTTTGAG 58.680 40.000 0.00 0.00 37.73 3.02
2311 2417 8.025445 CCATTACAAGACTTTGAGGAAAATCTG 58.975 37.037 0.00 0.00 37.73 2.90
2331 2437 1.098050 GAGCCCTATGCAACCAACAG 58.902 55.000 0.00 0.00 44.83 3.16
2356 2462 1.444553 CTCCGAACAGTCCGAGCAC 60.445 63.158 0.00 0.00 0.00 4.40
2357 2463 2.432628 CCGAACAGTCCGAGCACC 60.433 66.667 0.00 0.00 0.00 5.01
2362 2468 2.023414 AACAGTCCGAGCACCGTTCA 62.023 55.000 0.00 0.00 36.31 3.18
2391 2497 2.840511 TGGGCTACCCTATTCTGTGAA 58.159 47.619 3.93 0.00 45.70 3.18
2447 2553 5.241403 TCCAACAAAAGCTTGATCTCCTA 57.759 39.130 0.00 0.00 36.33 2.94
2463 2569 6.999272 TGATCTCCTACACTAGATAACCAGAC 59.001 42.308 0.00 0.00 32.60 3.51
2482 2588 2.226674 GACGGTGATATGATGAGCGAGA 59.773 50.000 4.59 0.00 39.69 4.04
2494 2600 0.461548 GAGCGAGACATCCACCATCA 59.538 55.000 0.00 0.00 0.00 3.07
2537 2643 8.344831 CGAATCTGATTGCACAATAATAGGAAA 58.655 33.333 7.78 0.00 0.00 3.13
2598 2704 6.599244 TGATTGAAAAACTCAGACACTCTGTT 59.401 34.615 0.00 0.00 44.58 3.16
2619 2725 0.391793 GTGGTGGAGCTAGGCAGAAC 60.392 60.000 0.00 0.00 0.00 3.01
2622 2728 0.107945 GTGGAGCTAGGCAGAACCAG 60.108 60.000 0.00 0.00 43.14 4.00
2625 2731 0.461693 GAGCTAGGCAGAACCAGCTG 60.462 60.000 6.78 6.78 46.48 4.24
3098 3204 3.414549 TGTTTTCCTTCGCAAGTTGTC 57.585 42.857 4.48 0.00 39.48 3.18
3105 3211 2.811431 CCTTCGCAAGTTGTCCATGTTA 59.189 45.455 4.48 0.00 39.48 2.41
3110 3216 2.554344 GCAAGTTGTCCATGTTAGGGGA 60.554 50.000 4.48 0.00 0.00 4.81
3180 3286 3.192541 TGCACTCTGTTAAGTCTGCAA 57.807 42.857 0.00 0.00 35.41 4.08
3236 3342 1.972660 CTCGGGATCCAAGGGTCACC 61.973 65.000 15.23 0.00 0.00 4.02
3256 3362 3.852578 ACCCCAAGTCCAAATAGATGAGT 59.147 43.478 0.00 0.00 0.00 3.41
3268 3374 5.894298 AATAGATGAGTCATTGCCTACCA 57.106 39.130 7.16 0.00 0.00 3.25
3273 3379 2.575735 TGAGTCATTGCCTACCATCCAA 59.424 45.455 0.00 0.00 0.00 3.53
3281 3388 2.504175 TGCCTACCATCCAAACTAGTCC 59.496 50.000 0.00 0.00 0.00 3.85
3294 3401 6.935208 TCCAAACTAGTCCTTTCTTAAGAAGC 59.065 38.462 17.05 9.67 35.21 3.86
3296 3403 8.095169 CCAAACTAGTCCTTTCTTAAGAAGCTA 58.905 37.037 17.05 15.41 35.21 3.32
3297 3404 9.145865 CAAACTAGTCCTTTCTTAAGAAGCTAG 57.854 37.037 25.84 25.84 35.44 3.42
3329 3436 0.336048 ATCCCCTTCCACACCATTGG 59.664 55.000 0.00 0.00 38.10 3.16
3383 3490 4.575885 TGCCCATTAGGATAGTATTTCGC 58.424 43.478 0.00 0.00 38.24 4.70
3386 3493 5.105064 GCCCATTAGGATAGTATTTCGCCTA 60.105 44.000 0.00 0.00 38.24 3.93
3410 3517 4.444536 AGTAGGCGAACACACAAACTTTA 58.555 39.130 0.00 0.00 0.00 1.85
3433 3540 1.086696 CTTGTCCAGTAACCGCCATG 58.913 55.000 0.00 0.00 0.00 3.66
3474 3581 5.066893 GGCTTGATTAAATGCTCTCATGTCA 59.933 40.000 0.00 0.00 32.23 3.58
3475 3582 6.405065 GGCTTGATTAAATGCTCTCATGTCAA 60.405 38.462 0.00 0.00 32.23 3.18
3476 3583 6.691818 GCTTGATTAAATGCTCTCATGTCAAG 59.308 38.462 8.94 8.94 39.10 3.02
3477 3584 6.127810 TGATTAAATGCTCTCATGTCAAGC 57.872 37.500 8.98 8.98 36.56 4.01
3483 3590 1.883638 GCTCTCATGTCAAGCAACCCA 60.884 52.381 10.46 0.00 36.06 4.51
3485 3592 2.486982 CTCTCATGTCAAGCAACCCAAG 59.513 50.000 0.00 0.00 0.00 3.61
3487 3594 0.037975 CATGTCAAGCAACCCAAGCC 60.038 55.000 0.00 0.00 0.00 4.35
3488 3595 0.469705 ATGTCAAGCAACCCAAGCCA 60.470 50.000 0.00 0.00 0.00 4.75
3489 3596 0.469705 TGTCAAGCAACCCAAGCCAT 60.470 50.000 0.00 0.00 0.00 4.40
3490 3597 0.681175 GTCAAGCAACCCAAGCCATT 59.319 50.000 0.00 0.00 0.00 3.16
3491 3598 1.070601 GTCAAGCAACCCAAGCCATTT 59.929 47.619 0.00 0.00 0.00 2.32
3492 3599 1.070445 TCAAGCAACCCAAGCCATTTG 59.930 47.619 0.00 0.00 36.50 2.32
3493 3600 1.130777 AAGCAACCCAAGCCATTTGT 58.869 45.000 0.00 0.00 34.87 2.83
3494 3601 1.130777 AGCAACCCAAGCCATTTGTT 58.869 45.000 0.00 0.00 34.87 2.83
3495 3602 1.490069 AGCAACCCAAGCCATTTGTTT 59.510 42.857 0.00 0.00 34.87 2.83
3496 3603 2.703007 AGCAACCCAAGCCATTTGTTTA 59.297 40.909 0.00 0.00 34.87 2.01
3497 3604 3.135530 AGCAACCCAAGCCATTTGTTTAA 59.864 39.130 0.00 0.00 34.87 1.52
3498 3605 3.879892 GCAACCCAAGCCATTTGTTTAAA 59.120 39.130 0.00 0.00 34.87 1.52
3499 3606 4.260990 GCAACCCAAGCCATTTGTTTAAAC 60.261 41.667 11.54 11.54 34.87 2.01
3500 3607 4.079980 ACCCAAGCCATTTGTTTAAACC 57.920 40.909 15.59 0.00 34.87 3.27
3501 3608 3.181449 ACCCAAGCCATTTGTTTAAACCC 60.181 43.478 15.59 0.00 34.87 4.11
3502 3609 3.181450 CCCAAGCCATTTGTTTAAACCCA 60.181 43.478 15.59 2.60 34.87 4.51
3503 3610 4.455606 CCAAGCCATTTGTTTAAACCCAA 58.544 39.130 15.59 8.90 34.87 4.12
3504 3611 4.514816 CCAAGCCATTTGTTTAAACCCAAG 59.485 41.667 15.59 3.83 34.87 3.61
3505 3612 5.363939 CAAGCCATTTGTTTAAACCCAAGA 58.636 37.500 15.59 0.00 31.92 3.02
3506 3613 5.213891 AGCCATTTGTTTAAACCCAAGAG 57.786 39.130 15.59 5.73 0.00 2.85
3507 3614 4.040339 AGCCATTTGTTTAAACCCAAGAGG 59.960 41.667 15.59 13.74 43.78 3.69
3535 3642 2.994186 TTGTTTCGGTAGGATAGGCC 57.006 50.000 0.00 0.00 0.00 5.19
3657 3764 6.149474 AGTTTAAACACACTCATCACATAGGC 59.851 38.462 20.06 0.00 0.00 3.93
3686 3793 4.218635 TGGCCTGAGCTATCGACTTAATAG 59.781 45.833 3.32 0.00 39.73 1.73
3699 3806 7.664552 TCGACTTAATAGGGATTTCCTTACA 57.335 36.000 0.00 0.00 45.47 2.41
3708 3815 6.642733 AGGGATTTCCTTACAAGAAGATGA 57.357 37.500 0.00 0.00 45.47 2.92
3728 3835 1.009829 CATGTACCTTTCGCTCCAGC 58.990 55.000 0.00 0.00 37.78 4.85
3757 3864 1.200948 CTTTTGCTAAGCCTGGACTGC 59.799 52.381 0.00 0.00 0.00 4.40
3840 3947 6.373774 CAGTAATCTCCAAAATGCTCTTCACT 59.626 38.462 0.00 0.00 0.00 3.41
3879 3986 5.584253 ATCTTGATGACACGTACTAGCTT 57.416 39.130 0.00 0.00 0.00 3.74
3957 4064 4.897140 CCAAGAAAAGGCAATGGATTTCA 58.103 39.130 0.00 0.00 34.91 2.69
3958 4065 5.307204 CCAAGAAAAGGCAATGGATTTCAA 58.693 37.500 0.00 0.00 34.91 2.69
3959 4066 5.764192 CCAAGAAAAGGCAATGGATTTCAAA 59.236 36.000 0.00 0.00 34.91 2.69
3960 4067 6.262720 CCAAGAAAAGGCAATGGATTTCAAAA 59.737 34.615 0.00 0.00 34.91 2.44
3995 4102 7.513660 GCAATTGTCGAAAAGAAAGTTGAGAAC 60.514 37.037 7.40 0.00 0.00 3.01
4036 4143 6.670695 AATAATCAGCAAAAGACCCAAACT 57.329 33.333 0.00 0.00 0.00 2.66
4057 4164 5.114081 ACTAAACCGCGTTATTATGAAGCT 58.886 37.500 4.92 0.00 0.00 3.74
4058 4165 6.275335 ACTAAACCGCGTTATTATGAAGCTA 58.725 36.000 4.92 0.00 0.00 3.32
4059 4166 5.652744 AAACCGCGTTATTATGAAGCTAG 57.347 39.130 4.92 0.00 0.00 3.42
4097 4204 0.937304 GCAAAACACGAGCACTCTGA 59.063 50.000 0.00 0.00 0.00 3.27
4203 4310 2.762535 TGGCCACTAGCTTTACAGAC 57.237 50.000 0.00 0.00 43.05 3.51
4228 4335 3.335579 GACAGGGTCCACAAAGATACAC 58.664 50.000 0.00 0.00 0.00 2.90
4229 4336 2.039879 ACAGGGTCCACAAAGATACACC 59.960 50.000 0.00 0.00 0.00 4.16
4232 4339 2.224917 GGGTCCACAAAGATACACCCAA 60.225 50.000 0.00 0.00 42.80 4.12
4233 4340 3.081804 GGTCCACAAAGATACACCCAAG 58.918 50.000 0.00 0.00 0.00 3.61
4274 4385 6.747125 TCTGCTCTCTTCTGATAATCATGTC 58.253 40.000 0.00 0.00 0.00 3.06
4275 4386 6.323225 TCTGCTCTCTTCTGATAATCATGTCA 59.677 38.462 0.00 0.00 0.00 3.58
4276 4387 7.015389 TCTGCTCTCTTCTGATAATCATGTCAT 59.985 37.037 0.00 0.00 0.00 3.06
4277 4388 7.506971 TGCTCTCTTCTGATAATCATGTCATT 58.493 34.615 0.00 0.00 0.00 2.57
4278 4389 7.441458 TGCTCTCTTCTGATAATCATGTCATTG 59.559 37.037 0.00 0.00 0.00 2.82
4279 4390 7.656542 GCTCTCTTCTGATAATCATGTCATTGA 59.343 37.037 0.00 0.00 0.00 2.57
4280 4391 9.713713 CTCTCTTCTGATAATCATGTCATTGAT 57.286 33.333 0.00 0.00 37.96 2.57
4577 4706 1.404391 GATCAACAATGGCTGAGCTGG 59.596 52.381 3.72 0.00 0.00 4.85
4580 4709 1.342174 CAACAATGGCTGAGCTGGTTT 59.658 47.619 3.72 0.00 0.00 3.27
4583 4717 1.068055 CAATGGCTGAGCTGGTTTGAC 60.068 52.381 3.72 0.00 0.00 3.18
4725 4944 4.078516 CCGGACCGGGACAAGACC 62.079 72.222 26.15 0.00 44.15 3.85
4863 5082 3.369892 CCCAGAACAACCTCGAGATGATT 60.370 47.826 15.71 9.29 0.00 2.57
5012 5260 4.570930 TCGCCATTGTTGTTAGTACATGA 58.429 39.130 0.00 0.00 33.44 3.07
5083 5331 1.593209 GTCCAACTTCGTGTGCCGA 60.593 57.895 0.00 0.00 45.66 5.54
5542 5790 2.437897 CTGAAGCAGGCCACCCTT 59.562 61.111 5.01 3.55 40.33 3.95
5599 5847 2.234908 CCTCATCGTCAGGAACTTCCTT 59.765 50.000 7.69 0.00 46.91 3.36
5615 5863 1.065709 TCCTTAAGGTTGGTCGATGCC 60.066 52.381 21.04 0.00 36.34 4.40
5616 5864 1.379527 CTTAAGGTTGGTCGATGCCC 58.620 55.000 0.00 0.00 0.00 5.36
5619 5867 4.041762 GGTTGGTCGATGCCCCCA 62.042 66.667 0.00 0.00 0.00 4.96
5620 5868 2.275418 GTTGGTCGATGCCCCCAT 59.725 61.111 0.00 0.00 0.00 4.00
5621 5869 2.120909 GTTGGTCGATGCCCCCATG 61.121 63.158 0.00 0.00 0.00 3.66
5624 5872 1.275421 TGGTCGATGCCCCCATGTTA 61.275 55.000 0.00 0.00 0.00 2.41
5625 5873 0.110486 GGTCGATGCCCCCATGTTAT 59.890 55.000 0.00 0.00 0.00 1.89
5626 5874 1.238439 GTCGATGCCCCCATGTTATG 58.762 55.000 0.00 0.00 0.00 1.90
5627 5875 0.843309 TCGATGCCCCCATGTTATGT 59.157 50.000 0.00 0.00 0.00 2.29
5628 5876 1.214175 TCGATGCCCCCATGTTATGTT 59.786 47.619 0.00 0.00 0.00 2.71
5631 5879 0.901124 TGCCCCCATGTTATGTTTGC 59.099 50.000 0.00 0.00 0.00 3.68
5633 5881 2.291865 TGCCCCCATGTTATGTTTGCTA 60.292 45.455 0.00 0.00 0.00 3.49
5701 5971 3.338249 AGTCAGTAATGTGATGTGTGGC 58.662 45.455 0.00 0.00 0.00 5.01
5703 5973 3.125829 GTCAGTAATGTGATGTGTGGCTG 59.874 47.826 0.00 0.00 0.00 4.85
5704 5974 3.007831 TCAGTAATGTGATGTGTGGCTGA 59.992 43.478 0.00 0.00 0.00 4.26
5707 5977 3.928727 AATGTGATGTGTGGCTGAAAG 57.071 42.857 0.00 0.00 0.00 2.62
5708 5978 2.636647 TGTGATGTGTGGCTGAAAGA 57.363 45.000 0.00 0.00 34.07 2.52
5931 6211 5.050295 GCTGGTAAGTAGACAAAGAACACAC 60.050 44.000 0.00 0.00 0.00 3.82
6034 6326 2.048597 ACATCGCGGCGTCAAAGA 60.049 55.556 22.90 1.36 0.00 2.52
6093 6385 0.387239 GCAACGTCCACATCAAAGGC 60.387 55.000 0.00 0.00 0.00 4.35
6152 6452 4.994852 AGTGCGATCAAGTTTGCTAACTAA 59.005 37.500 13.95 6.28 43.74 2.24
6153 6453 5.080068 GTGCGATCAAGTTTGCTAACTAAC 58.920 41.667 13.95 5.56 43.74 2.34
6154 6454 4.994852 TGCGATCAAGTTTGCTAACTAACT 59.005 37.500 13.95 1.89 43.74 2.24
6155 6455 6.090358 GTGCGATCAAGTTTGCTAACTAACTA 59.910 38.462 13.95 1.21 43.74 2.24
6160 6460 8.773404 ATCAAGTTTGCTAACTAACTATTCGT 57.227 30.769 13.95 0.00 43.74 3.85
6162 6462 6.963049 AGTTTGCTAACTAACTATTCGTGG 57.037 37.500 11.99 0.00 42.73 4.94
6169 6469 0.460635 TAACTATTCGTGGCCGGTGC 60.461 55.000 1.90 0.00 33.95 5.01
6257 6557 3.181463 GGTGTTCAGTAACCTGTACCACA 60.181 47.826 0.00 0.00 37.98 4.17
6450 6750 0.460987 GCCAGGTTCCTCGTCATGAG 60.461 60.000 0.00 0.00 44.83 2.90
6629 6935 3.136123 CGTCGTCCGGGGAGCTTA 61.136 66.667 0.00 0.00 0.00 3.09
6631 6937 1.751927 GTCGTCCGGGGAGCTTAGA 60.752 63.158 0.00 0.00 0.00 2.10
6641 6947 1.691195 GGAGCTTAGACAGGGGAGGC 61.691 65.000 0.00 0.00 0.00 4.70
6796 7120 6.256975 TCAAAACCATCATCGGTAAGTATTCG 59.743 38.462 0.00 0.00 38.76 3.34
6895 7221 3.003480 GAGGAATTAGCAGCTCAAACGT 58.997 45.455 0.00 0.00 0.00 3.99
6962 7288 0.835941 AGAAGGCGCTGATCCTGAAT 59.164 50.000 7.64 0.00 33.43 2.57
7047 7373 1.579698 CGAAGAGCACATGAGGATGG 58.420 55.000 0.00 0.00 33.39 3.51
7131 7457 9.612066 TTTCAGTAGCACATGTCATATAATTCA 57.388 29.630 0.00 0.00 0.00 2.57
7186 7512 4.467769 AGCCCTGAATAATCCAGTCATTG 58.532 43.478 0.00 0.00 29.35 2.82
7247 7574 1.543802 GTGATTTGCGATGTTTCCCCA 59.456 47.619 0.00 0.00 0.00 4.96
7351 7682 8.500773 TGGTGTAGTCATTTTATCGAAGAAAAC 58.499 33.333 9.91 2.09 43.58 2.43
7366 7697 5.347635 CGAAGAAAACGGATGATGTAGACAA 59.652 40.000 0.00 0.00 0.00 3.18
7370 7701 7.106239 AGAAAACGGATGATGTAGACAAGATT 58.894 34.615 0.00 0.00 0.00 2.40
7404 7735 1.911057 GCCTTAAGTTGGCTTCACCT 58.089 50.000 0.97 0.00 46.38 4.00
7423 7754 3.057033 ACCTGCTTGTTTTGATCATGAGC 60.057 43.478 3.40 3.40 0.00 4.26
7426 7757 2.162208 GCTTGTTTTGATCATGAGCCGA 59.838 45.455 8.78 0.00 0.00 5.54
7427 7758 3.751621 CTTGTTTTGATCATGAGCCGAC 58.248 45.455 8.78 5.12 0.00 4.79
7486 7817 4.034163 TGTGTTTTGCAATTGAGCATTGTG 59.966 37.500 10.34 0.00 45.19 3.33
7493 7824 3.182972 GCAATTGAGCATTGTGTGTTCAC 59.817 43.478 10.34 0.00 46.01 3.18
7516 7847 6.798959 CACACTTTAGAGCTTAAGCATTTCAC 59.201 38.462 28.39 12.12 45.16 3.18
7517 7848 6.017933 CACTTTAGAGCTTAAGCATTTCACG 58.982 40.000 28.39 13.21 45.16 4.35
7518 7849 4.600012 TTAGAGCTTAAGCATTTCACGC 57.400 40.909 28.39 7.65 45.16 5.34
7521 7852 2.154462 AGCTTAAGCATTTCACGCAGT 58.846 42.857 28.39 0.79 44.18 4.40
7534 7865 0.689745 ACGCAGTGCCCCTTAGGATA 60.690 55.000 10.11 0.00 42.51 2.59
7550 7887 8.001292 CCCTTAGGATAAAATTCACTGAGGAAT 58.999 37.037 0.00 0.00 37.17 3.01
7563 7900 5.063204 CACTGAGGAATTGTGGAACTTACA 58.937 41.667 0.00 0.00 38.04 2.41
7564 7901 5.707298 CACTGAGGAATTGTGGAACTTACAT 59.293 40.000 0.00 0.00 38.04 2.29
7593 7930 1.599797 CCAGCGTTTCCTTTCCCGT 60.600 57.895 0.00 0.00 0.00 5.28
7623 7960 6.959671 AAAAAGAACGCTTCATGTTTTGAA 57.040 29.167 0.00 0.00 42.09 2.69
7655 7992 6.866480 TCTGAAACAAGACAAAAGATTTGCT 58.134 32.000 2.88 0.00 0.00 3.91
7656 7993 7.995289 TCTGAAACAAGACAAAAGATTTGCTA 58.005 30.769 2.88 0.00 0.00 3.49
7745 8082 5.018539 AGCGGCATTACATTACTCAAGTA 57.981 39.130 1.45 0.00 0.00 2.24
7791 8128 2.043227 CGAGCCTCCTCCTTTATCCTT 58.957 52.381 0.00 0.00 34.49 3.36
7834 8171 1.134788 CGGCGGAGTTATGAAAGACCT 60.135 52.381 0.00 0.00 0.00 3.85
7844 8181 6.183347 AGTTATGAAAGACCTTAGCATTGCT 58.817 36.000 16.63 16.63 43.41 3.91
7866 8203 5.753716 CTCTCTTTCCAAATCTCCCAAGAT 58.246 41.667 0.00 0.00 44.37 2.40
7887 8224 2.875296 ACAAGCATAAACAAGGAGGCA 58.125 42.857 0.00 0.00 0.00 4.75
7918 8255 3.057596 TCTTTGGTTTGCACGATCAATCC 60.058 43.478 11.72 11.72 36.71 3.01
7929 8266 5.359292 TGCACGATCAATCCCATTTTAATCA 59.641 36.000 0.00 0.00 0.00 2.57
7935 8272 7.383029 CGATCAATCCCATTTTAATCACCAATG 59.617 37.037 0.00 0.00 0.00 2.82
7936 8273 6.347696 TCAATCCCATTTTAATCACCAATGC 58.652 36.000 0.00 0.00 0.00 3.56
7947 8284 2.114616 TCACCAATGCCAAACCAAAGT 58.885 42.857 0.00 0.00 0.00 2.66
7948 8285 2.158986 TCACCAATGCCAAACCAAAGTG 60.159 45.455 0.00 0.00 0.00 3.16
7954 8291 3.902881 TGCCAAACCAAAGTGTCAAAT 57.097 38.095 0.00 0.00 0.00 2.32
7956 8293 3.450457 TGCCAAACCAAAGTGTCAAATCT 59.550 39.130 0.00 0.00 0.00 2.40
7969 8306 5.248020 AGTGTCAAATCTTCAGATCCTCACT 59.752 40.000 0.00 9.24 32.75 3.41
8008 8345 1.445582 CCACGTAGCAACCTCGGTC 60.446 63.158 0.00 0.00 0.00 4.79
8013 8350 0.108756 GTAGCAACCTCGGTCCAGAC 60.109 60.000 0.00 0.00 0.00 3.51
8053 8391 5.674569 GCATTGAAATAGAATGTGTGTCGCT 60.675 40.000 0.00 0.00 33.96 4.93
8071 8409 1.276421 GCTGTCTCCTCCACTTGCTTA 59.724 52.381 0.00 0.00 0.00 3.09
8072 8410 2.289694 GCTGTCTCCTCCACTTGCTTAA 60.290 50.000 0.00 0.00 0.00 1.85
8074 8412 4.389374 CTGTCTCCTCCACTTGCTTAAAA 58.611 43.478 0.00 0.00 0.00 1.52
8075 8413 4.389374 TGTCTCCTCCACTTGCTTAAAAG 58.611 43.478 0.00 0.00 0.00 2.27
8086 8424 2.134201 GCTTAAAAGCGCACAAAGGT 57.866 45.000 11.47 0.00 42.88 3.50
8088 8426 2.218530 GCTTAAAAGCGCACAAAGGTTG 59.781 45.455 11.47 0.00 42.88 3.77
8089 8427 1.846541 TAAAAGCGCACAAAGGTTGC 58.153 45.000 11.47 0.00 0.00 4.17
8103 8442 2.203480 TTGCAGTTCTGGCACCCC 60.203 61.111 1.97 0.00 41.75 4.95
8106 8445 2.520458 CAGTTCTGGCACCCCCAA 59.480 61.111 0.00 0.00 44.81 4.12
8107 8446 1.903404 CAGTTCTGGCACCCCCAAC 60.903 63.158 0.00 0.00 44.81 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.797087 CGATGCGGTCCGTAATACTTGT 60.797 50.000 13.94 0.00 0.00 3.16
15 16 1.784856 CGATGCGGTCCGTAATACTTG 59.215 52.381 13.94 0.00 0.00 3.16
16 17 1.677576 TCGATGCGGTCCGTAATACTT 59.322 47.619 13.94 0.00 0.00 2.24
17 18 1.311859 TCGATGCGGTCCGTAATACT 58.688 50.000 13.94 0.00 0.00 2.12
18 19 2.124011 TTCGATGCGGTCCGTAATAC 57.876 50.000 13.94 4.02 0.00 1.89
51 52 3.194542 CGGCTGGGTTCAAAATTCCAATA 59.805 43.478 0.00 0.00 0.00 1.90
52 53 2.028203 CGGCTGGGTTCAAAATTCCAAT 60.028 45.455 0.00 0.00 0.00 3.16
56 57 1.886542 ACTCGGCTGGGTTCAAAATTC 59.113 47.619 0.00 0.00 0.00 2.17
68 69 3.764810 CTAGCGCTCCACTCGGCTG 62.765 68.421 16.34 0.00 36.97 4.85
88 89 4.500116 GGCCTGCTCGTCGAGTCC 62.500 72.222 22.61 14.58 31.39 3.85
90 91 1.248785 TTTAGGCCTGCTCGTCGAGT 61.249 55.000 22.61 5.15 31.39 4.18
91 92 0.802607 GTTTAGGCCTGCTCGTCGAG 60.803 60.000 17.99 18.08 0.00 4.04
92 93 1.214589 GTTTAGGCCTGCTCGTCGA 59.785 57.895 17.99 0.00 0.00 4.20
93 94 0.669318 TTGTTTAGGCCTGCTCGTCG 60.669 55.000 17.99 0.00 0.00 5.12
94 95 0.796927 GTTGTTTAGGCCTGCTCGTC 59.203 55.000 17.99 0.30 0.00 4.20
132 134 4.148079 TGCAATCCATGTAGTTTGGTTCA 58.852 39.130 0.00 0.00 35.64 3.18
148 150 6.532302 TGCTTGTTCAAATATGTCATGCAATC 59.468 34.615 0.00 0.00 38.34 2.67
206 208 7.790782 AATATTTTTCTAGTTTTGGGGCTGA 57.209 32.000 0.00 0.00 0.00 4.26
226 228 7.255242 CGCTGTTGGGAATTTCAGATGTAATAT 60.255 37.037 0.00 0.00 0.00 1.28
236 238 1.974265 TGACGCTGTTGGGAATTTCA 58.026 45.000 0.00 0.00 0.00 2.69
240 242 1.003580 ACAGATGACGCTGTTGGGAAT 59.996 47.619 0.00 0.00 46.42 3.01
242 244 2.057830 ACAGATGACGCTGTTGGGA 58.942 52.632 0.00 0.00 46.42 4.37
258 260 3.932710 GCTTCTCCATGTTTATCACGACA 59.067 43.478 0.00 0.00 0.00 4.35
455 460 2.693762 CGGGTCCATGCAGTGCAAG 61.694 63.158 23.90 18.29 43.62 4.01
484 500 1.464608 CATGGAATGCTCGTTGACGTT 59.535 47.619 3.25 0.00 37.62 3.99
540 580 2.614987 GCTGTGGCTGAGAGAATTCACT 60.615 50.000 8.44 6.67 35.22 3.41
553 593 2.591715 GTTGTCGTGGCTGTGGCT 60.592 61.111 0.00 0.00 38.73 4.75
616 657 1.380785 TACGGCTCTACCCCTGGTG 60.381 63.158 0.00 0.00 36.19 4.17
630 671 0.867086 GTAGCTCTACGCCTCTACGG 59.133 60.000 0.00 0.00 40.39 4.02
744 789 3.695825 AGGGGTCCTGTCCGGGAT 61.696 66.667 0.00 0.00 37.73 3.85
794 839 3.882326 CTGGCGGGGCATCCATCT 61.882 66.667 0.00 0.00 34.36 2.90
807 852 2.983725 AATAATGGAGGCGGGCTGGC 62.984 60.000 12.72 12.72 45.27 4.85
808 853 0.468029 AAATAATGGAGGCGGGCTGG 60.468 55.000 9.52 0.00 0.00 4.85
809 854 0.954452 GAAATAATGGAGGCGGGCTG 59.046 55.000 9.52 0.00 0.00 4.85
810 855 0.535102 CGAAATAATGGAGGCGGGCT 60.535 55.000 2.69 2.69 0.00 5.19
811 856 0.534203 TCGAAATAATGGAGGCGGGC 60.534 55.000 0.00 0.00 0.00 6.13
873 918 6.294508 GGAGGATCGAAGGAAGAGAATTAGAG 60.295 46.154 0.00 0.00 34.37 2.43
877 922 3.389656 GGGAGGATCGAAGGAAGAGAATT 59.610 47.826 0.00 0.00 34.37 2.17
878 923 2.969262 GGGAGGATCGAAGGAAGAGAAT 59.031 50.000 0.00 0.00 34.37 2.40
879 924 2.389715 GGGAGGATCGAAGGAAGAGAA 58.610 52.381 0.00 0.00 34.37 2.87
881 926 1.044611 GGGGAGGATCGAAGGAAGAG 58.955 60.000 0.00 0.00 34.37 2.85
882 927 0.755698 CGGGGAGGATCGAAGGAAGA 60.756 60.000 0.00 0.00 34.37 2.87
883 928 1.742768 CGGGGAGGATCGAAGGAAG 59.257 63.158 0.00 0.00 34.37 3.46
884 929 1.760875 CCGGGGAGGATCGAAGGAA 60.761 63.158 0.00 0.00 45.00 3.36
887 932 1.122019 AATCCCGGGGAGGATCGAAG 61.122 60.000 23.50 0.00 46.31 3.79
888 933 0.189080 TAATCCCGGGGAGGATCGAA 59.811 55.000 23.50 0.00 46.31 3.71
889 934 0.412244 ATAATCCCGGGGAGGATCGA 59.588 55.000 23.50 0.00 46.31 3.59
891 936 2.255770 AGATAATCCCGGGGAGGATC 57.744 55.000 23.50 23.03 46.31 3.36
893 938 3.866515 ATAAGATAATCCCGGGGAGGA 57.133 47.619 23.50 11.98 45.00 3.71
894 939 4.141688 GCTAATAAGATAATCCCGGGGAGG 60.142 50.000 23.50 0.00 34.05 4.30
895 940 4.717280 AGCTAATAAGATAATCCCGGGGAG 59.283 45.833 23.50 4.06 34.05 4.30
896 941 4.695606 AGCTAATAAGATAATCCCGGGGA 58.304 43.478 23.50 20.15 35.55 4.81
897 942 5.453480 GCTAGCTAATAAGATAATCCCGGGG 60.453 48.000 23.50 6.77 0.00 5.73
898 943 5.128827 TGCTAGCTAATAAGATAATCCCGGG 59.871 44.000 16.85 16.85 0.00 5.73
899 944 6.043411 GTGCTAGCTAATAAGATAATCCCGG 58.957 44.000 17.23 0.00 0.00 5.73
900 945 5.744345 CGTGCTAGCTAATAAGATAATCCCG 59.256 44.000 17.23 0.00 0.00 5.14
901 946 6.864342 TCGTGCTAGCTAATAAGATAATCCC 58.136 40.000 17.23 0.00 0.00 3.85
902 947 7.486551 CACTCGTGCTAGCTAATAAGATAATCC 59.513 40.741 17.23 0.00 0.00 3.01
904 949 7.039644 ACCACTCGTGCTAGCTAATAAGATAAT 60.040 37.037 17.23 0.00 0.00 1.28
905 950 6.264744 ACCACTCGTGCTAGCTAATAAGATAA 59.735 38.462 17.23 0.00 0.00 1.75
906 951 5.768662 ACCACTCGTGCTAGCTAATAAGATA 59.231 40.000 17.23 0.00 0.00 1.98
907 952 4.585162 ACCACTCGTGCTAGCTAATAAGAT 59.415 41.667 17.23 0.00 0.00 2.40
908 953 3.952323 ACCACTCGTGCTAGCTAATAAGA 59.048 43.478 17.23 2.25 0.00 2.10
909 954 4.045104 CACCACTCGTGCTAGCTAATAAG 58.955 47.826 17.23 8.68 35.18 1.73
910 955 4.041740 CACCACTCGTGCTAGCTAATAA 57.958 45.455 17.23 0.00 35.18 1.40
911 956 3.710326 CACCACTCGTGCTAGCTAATA 57.290 47.619 17.23 0.00 35.18 0.98
912 957 2.586258 CACCACTCGTGCTAGCTAAT 57.414 50.000 17.23 0.00 35.18 1.73
932 977 3.125146 CGTAGGTACGTACACTGCTTACA 59.875 47.826 26.02 3.59 44.13 2.41
954 999 1.092345 GCCTCAATCTCTCCGGCAAC 61.092 60.000 0.00 0.00 40.41 4.17
955 1000 1.221840 GCCTCAATCTCTCCGGCAA 59.778 57.895 0.00 0.00 40.41 4.52
956 1001 2.903357 GCCTCAATCTCTCCGGCA 59.097 61.111 0.00 0.00 40.41 5.69
958 1003 1.227497 GCTGCCTCAATCTCTCCGG 60.227 63.158 0.00 0.00 0.00 5.14
960 1005 1.122227 AGAGCTGCCTCAATCTCTCC 58.878 55.000 0.00 0.00 40.68 3.71
961 1006 2.093553 ACAAGAGCTGCCTCAATCTCTC 60.094 50.000 0.00 0.00 40.68 3.20
962 1007 1.907936 ACAAGAGCTGCCTCAATCTCT 59.092 47.619 0.00 0.00 40.68 3.10
963 1008 2.399916 ACAAGAGCTGCCTCAATCTC 57.600 50.000 0.00 0.00 40.68 2.75
964 1009 2.709213 GAACAAGAGCTGCCTCAATCT 58.291 47.619 0.00 0.00 40.68 2.40
965 1010 1.396301 CGAACAAGAGCTGCCTCAATC 59.604 52.381 0.00 0.00 40.68 2.67
966 1011 1.002430 TCGAACAAGAGCTGCCTCAAT 59.998 47.619 0.00 0.00 40.68 2.57
981 1043 4.790861 GCTCCCGTCCCGTCGAAC 62.791 72.222 0.00 0.00 0.00 3.95
986 1048 2.521958 CTTCATTGCTCCCGTCCCGT 62.522 60.000 0.00 0.00 0.00 5.28
987 1049 1.815421 CTTCATTGCTCCCGTCCCG 60.815 63.158 0.00 0.00 0.00 5.14
988 1050 0.181350 ATCTTCATTGCTCCCGTCCC 59.819 55.000 0.00 0.00 0.00 4.46
989 1051 1.139853 AGATCTTCATTGCTCCCGTCC 59.860 52.381 0.00 0.00 0.00 4.79
990 1052 2.478831 GAGATCTTCATTGCTCCCGTC 58.521 52.381 0.00 0.00 0.00 4.79
991 1053 1.139853 GGAGATCTTCATTGCTCCCGT 59.860 52.381 0.00 0.00 40.79 5.28
1015 1077 1.808799 CGCTGCTCGTGCTCTTGAT 60.809 57.895 11.19 0.00 40.48 2.57
1226 1288 0.323629 CAGGTACCGATGGTGGTGTT 59.676 55.000 6.18 0.00 43.68 3.32
1262 1330 5.126061 AGCACCTAAACCATTAGCATTCTTG 59.874 40.000 0.00 0.00 37.74 3.02
1551 1632 4.526650 GGAAGAAGAAGAAGAGAGGACTGT 59.473 45.833 0.00 0.00 0.00 3.55
1590 1674 1.855978 TGCACAACTAACTGACGTTCG 59.144 47.619 0.00 0.00 34.59 3.95
1620 1704 5.187967 TGGGTAGAAAATGAGAGGAGAGAAC 59.812 44.000 0.00 0.00 0.00 3.01
1640 1725 3.373830 CCCATACCATGTTCATTTGGGT 58.626 45.455 0.00 0.00 37.99 4.51
1659 1754 6.088016 TGAAAACATGCATATATCTTGCCC 57.912 37.500 0.00 0.00 39.39 5.36
1660 1755 6.145048 GCTTGAAAACATGCATATATCTTGCC 59.855 38.462 0.00 0.00 39.39 4.52
1661 1756 6.698329 TGCTTGAAAACATGCATATATCTTGC 59.302 34.615 0.00 5.59 40.55 4.01
1662 1757 8.637281 TTGCTTGAAAACATGCATATATCTTG 57.363 30.769 0.00 0.00 35.61 3.02
1663 1758 8.472413 ACTTGCTTGAAAACATGCATATATCTT 58.528 29.630 0.00 0.00 35.61 2.40
1664 1759 8.004087 ACTTGCTTGAAAACATGCATATATCT 57.996 30.769 0.00 0.00 35.61 1.98
1665 1760 9.734620 TTACTTGCTTGAAAACATGCATATATC 57.265 29.630 0.00 0.00 35.61 1.63
1667 1762 9.571810 CTTTACTTGCTTGAAAACATGCATATA 57.428 29.630 0.00 5.26 35.61 0.86
1668 1763 7.063780 GCTTTACTTGCTTGAAAACATGCATAT 59.936 33.333 0.00 0.00 35.61 1.78
1669 1764 6.365789 GCTTTACTTGCTTGAAAACATGCATA 59.634 34.615 0.00 1.21 35.61 3.14
1720 1815 7.643569 TTATGTGGACTTTGCATGATAACAT 57.356 32.000 0.00 0.00 37.19 2.71
1721 1816 7.122501 ACATTATGTGGACTTTGCATGATAACA 59.877 33.333 0.00 0.00 0.00 2.41
1722 1817 7.483307 ACATTATGTGGACTTTGCATGATAAC 58.517 34.615 0.00 0.00 0.00 1.89
1723 1818 7.643569 ACATTATGTGGACTTTGCATGATAA 57.356 32.000 0.00 0.00 0.00 1.75
1724 1819 7.643569 AACATTATGTGGACTTTGCATGATA 57.356 32.000 0.00 0.00 0.00 2.15
1725 1820 6.534475 AACATTATGTGGACTTTGCATGAT 57.466 33.333 0.00 0.00 0.00 2.45
1726 1821 5.981088 AACATTATGTGGACTTTGCATGA 57.019 34.783 0.00 0.00 0.00 3.07
1727 1822 7.482474 TGATAACATTATGTGGACTTTGCATG 58.518 34.615 0.00 0.00 0.00 4.06
1728 1823 7.643569 TGATAACATTATGTGGACTTTGCAT 57.356 32.000 0.00 0.00 0.00 3.96
1729 1824 7.482474 CATGATAACATTATGTGGACTTTGCA 58.518 34.615 0.00 0.00 34.15 4.08
1730 1825 6.418819 GCATGATAACATTATGTGGACTTTGC 59.581 38.462 0.00 1.61 34.15 3.68
1731 1826 7.482474 TGCATGATAACATTATGTGGACTTTG 58.518 34.615 0.00 0.00 34.15 2.77
1732 1827 7.643569 TGCATGATAACATTATGTGGACTTT 57.356 32.000 0.00 0.00 34.15 2.66
1733 1828 7.643569 TTGCATGATAACATTATGTGGACTT 57.356 32.000 0.00 0.00 34.15 3.01
1734 1829 7.340232 ACTTTGCATGATAACATTATGTGGACT 59.660 33.333 0.00 0.00 34.15 3.85
1735 1830 7.483307 ACTTTGCATGATAACATTATGTGGAC 58.517 34.615 0.00 0.00 34.15 4.02
1736 1831 7.201812 GGACTTTGCATGATAACATTATGTGGA 60.202 37.037 0.00 0.00 34.15 4.02
1737 1832 6.919662 GGACTTTGCATGATAACATTATGTGG 59.080 38.462 0.00 0.00 34.15 4.17
1738 1833 7.482474 TGGACTTTGCATGATAACATTATGTG 58.518 34.615 0.00 0.00 34.15 3.21
1788 1888 0.464452 CGGGGGTCAAGTCTGGATAC 59.536 60.000 0.00 0.00 0.00 2.24
1789 1889 0.042131 ACGGGGGTCAAGTCTGGATA 59.958 55.000 0.00 0.00 0.00 2.59
1790 1890 1.229529 ACGGGGGTCAAGTCTGGAT 60.230 57.895 0.00 0.00 0.00 3.41
1791 1891 1.911766 GACGGGGGTCAAGTCTGGA 60.912 63.158 0.00 0.00 32.58 3.86
1792 1892 2.214216 TGACGGGGGTCAAGTCTGG 61.214 63.158 0.00 0.00 36.01 3.86
1795 1895 2.048503 CGTGACGGGGGTCAAGTC 60.049 66.667 0.00 0.00 34.88 3.01
1852 1952 2.439135 TGCATACTAGCCATCACCACAT 59.561 45.455 0.00 0.00 0.00 3.21
1853 1953 1.836802 TGCATACTAGCCATCACCACA 59.163 47.619 0.00 0.00 0.00 4.17
1862 1962 4.629200 GCACAATATCTCTGCATACTAGCC 59.371 45.833 0.00 0.00 0.00 3.93
1913 2013 8.798975 TCTAGGAGACAACTTATATCCCAAAT 57.201 34.615 0.00 0.00 0.00 2.32
1917 2017 6.954684 TGGATCTAGGAGACAACTTATATCCC 59.045 42.308 0.00 0.00 0.00 3.85
1923 2023 7.841729 AGAGAAATGGATCTAGGAGACAACTTA 59.158 37.037 0.00 0.00 0.00 2.24
1973 2073 2.418060 GGCATTTGGTTTTATCCACCCG 60.418 50.000 0.00 0.00 37.20 5.28
2011 2111 9.923143 AAATGTGCATCAATTAATATGGATCAG 57.077 29.630 0.00 0.00 0.00 2.90
2068 2170 2.352651 CGTCATCACGCAATTCTGGATT 59.647 45.455 0.00 0.00 39.69 3.01
2073 2177 1.935873 CCATCGTCATCACGCAATTCT 59.064 47.619 0.00 0.00 46.28 2.40
2081 2185 5.111989 CACATATATCCCCATCGTCATCAC 58.888 45.833 0.00 0.00 0.00 3.06
2118 2222 5.290386 CGGATTCTTACTACCTTGTCCATC 58.710 45.833 0.00 0.00 0.00 3.51
2123 2227 5.915175 GAATCCGGATTCTTACTACCTTGT 58.085 41.667 38.55 12.11 42.85 3.16
2150 2254 3.384789 TCATAGAGGTCCTTTGTGATCCG 59.615 47.826 4.90 0.00 0.00 4.18
2191 2295 4.273969 GCCCGATTTTCGTTTGGATACATA 59.726 41.667 0.00 0.00 42.72 2.29
2192 2296 3.066203 GCCCGATTTTCGTTTGGATACAT 59.934 43.478 0.00 0.00 42.72 2.29
2201 2305 3.692101 TCATGTTATGCCCGATTTTCGTT 59.308 39.130 0.00 0.00 38.40 3.85
2204 2308 6.507023 AGAATTCATGTTATGCCCGATTTTC 58.493 36.000 8.44 0.00 0.00 2.29
2205 2309 6.469782 AGAATTCATGTTATGCCCGATTTT 57.530 33.333 8.44 0.00 0.00 1.82
2206 2310 6.469782 AAGAATTCATGTTATGCCCGATTT 57.530 33.333 8.44 0.00 0.00 2.17
2208 2312 6.469782 AAAAGAATTCATGTTATGCCCGAT 57.530 33.333 8.44 0.00 0.00 4.18
2209 2313 5.913137 AAAAGAATTCATGTTATGCCCGA 57.087 34.783 8.44 0.00 0.00 5.14
2221 2325 9.624697 CGATTCCTCACAAATAAAAAGAATTCA 57.375 29.630 8.44 0.00 0.00 2.57
2222 2326 9.076596 CCGATTCCTCACAAATAAAAAGAATTC 57.923 33.333 0.00 0.00 0.00 2.17
2226 2332 5.417580 CCCCGATTCCTCACAAATAAAAAGA 59.582 40.000 0.00 0.00 0.00 2.52
2227 2333 5.417580 TCCCCGATTCCTCACAAATAAAAAG 59.582 40.000 0.00 0.00 0.00 2.27
2238 2344 5.596772 GGAATAAAAATTCCCCGATTCCTCA 59.403 40.000 5.95 0.00 43.26 3.86
2277 2383 5.183713 TCAAAGTCTTGTAATGGCTGATTGG 59.816 40.000 0.00 0.00 33.94 3.16
2302 2408 2.234143 GCATAGGGCTCCAGATTTTCC 58.766 52.381 0.00 0.00 40.25 3.13
2311 2417 0.323360 TGTTGGTTGCATAGGGCTCC 60.323 55.000 0.00 0.00 45.15 4.70
2331 2437 2.029844 GACTGTTCGGAGCACAGCC 61.030 63.158 9.24 0.00 44.85 4.85
2356 2462 1.066143 AGCCCATAGTCTTGTGAACGG 60.066 52.381 0.00 0.00 0.00 4.44
2357 2463 2.386661 AGCCCATAGTCTTGTGAACG 57.613 50.000 0.00 0.00 0.00 3.95
2362 2468 5.639898 AGAATAGGGTAGCCCATAGTCTTGT 60.640 44.000 7.51 0.00 46.85 3.16
2463 2569 2.030805 TGTCTCGCTCATCATATCACCG 60.031 50.000 0.00 0.00 0.00 4.94
2470 2576 1.069823 GGTGGATGTCTCGCTCATCAT 59.930 52.381 13.23 0.00 42.16 2.45
2482 2588 3.415212 CACTGTCTTTGATGGTGGATGT 58.585 45.455 0.00 0.00 0.00 3.06
2494 2600 1.629043 TCGCTAGGACCACTGTCTTT 58.371 50.000 0.00 0.00 41.47 2.52
2598 2704 0.335019 TCTGCCTAGCTCCACCACTA 59.665 55.000 0.00 0.00 0.00 2.74
3076 3182 4.359706 GACAACTTGCGAAGGAAAACATT 58.640 39.130 0.00 0.00 37.43 2.71
3077 3183 3.243401 GGACAACTTGCGAAGGAAAACAT 60.243 43.478 0.00 0.00 37.43 2.71
3078 3184 2.098443 GGACAACTTGCGAAGGAAAACA 59.902 45.455 0.00 0.00 37.43 2.83
3079 3185 2.098443 TGGACAACTTGCGAAGGAAAAC 59.902 45.455 0.00 0.00 37.43 2.43
3080 3186 2.370349 TGGACAACTTGCGAAGGAAAA 58.630 42.857 0.00 0.00 37.43 2.29
3081 3187 2.045561 TGGACAACTTGCGAAGGAAA 57.954 45.000 0.00 0.00 37.43 3.13
3082 3188 1.879380 CATGGACAACTTGCGAAGGAA 59.121 47.619 0.00 0.00 35.74 3.36
3083 3189 1.202758 ACATGGACAACTTGCGAAGGA 60.203 47.619 0.00 0.00 0.00 3.36
3084 3190 1.238439 ACATGGACAACTTGCGAAGG 58.762 50.000 0.00 0.00 0.00 3.46
3089 3195 1.818674 CCCCTAACATGGACAACTTGC 59.181 52.381 0.00 0.00 0.00 4.01
3098 3204 1.073923 GGCTATGGTCCCCTAACATGG 59.926 57.143 0.00 0.00 0.00 3.66
3131 3237 1.339097 CTATGTAGGTTCCCCGAGGG 58.661 60.000 0.00 0.00 46.11 4.30
3132 3238 0.680061 GCTATGTAGGTTCCCCGAGG 59.320 60.000 0.00 0.00 35.12 4.63
3133 3239 1.614413 GAGCTATGTAGGTTCCCCGAG 59.386 57.143 0.00 0.00 33.58 4.63
3134 3240 1.700955 GAGCTATGTAGGTTCCCCGA 58.299 55.000 0.00 0.00 33.58 5.14
3135 3241 0.680061 GGAGCTATGTAGGTTCCCCG 59.320 60.000 0.00 0.00 33.58 5.73
3136 3242 0.680061 CGGAGCTATGTAGGTTCCCC 59.320 60.000 0.00 0.00 33.58 4.81
3152 3258 2.089887 TAACAGAGTGCAACGGCGGA 62.090 55.000 13.24 0.00 45.86 5.54
3180 3286 5.535406 CCGTCCTATAACACCTAAGAGACAT 59.465 44.000 0.00 0.00 0.00 3.06
3236 3342 5.102953 TGACTCATCTATTTGGACTTGGG 57.897 43.478 0.00 0.00 0.00 4.12
3256 3362 3.737559 AGTTTGGATGGTAGGCAATGA 57.262 42.857 0.00 0.00 0.00 2.57
3268 3374 7.608376 GCTTCTTAAGAAAGGACTAGTTTGGAT 59.392 37.037 18.25 0.00 33.07 3.41
3273 3379 8.653036 TCTAGCTTCTTAAGAAAGGACTAGTT 57.347 34.615 25.14 13.86 34.70 2.24
3281 3388 7.327214 ACATGGACTCTAGCTTCTTAAGAAAG 58.673 38.462 18.25 14.18 33.07 2.62
3294 3401 3.713764 AGGGGATTGAACATGGACTCTAG 59.286 47.826 0.00 0.00 0.00 2.43
3296 3403 2.566746 AGGGGATTGAACATGGACTCT 58.433 47.619 0.00 0.00 0.00 3.24
3297 3404 3.282885 GAAGGGGATTGAACATGGACTC 58.717 50.000 0.00 0.00 0.00 3.36
3329 3436 8.621532 TGATATGGTATTTACAGGCAATTCTC 57.378 34.615 0.00 0.00 0.00 2.87
3386 3493 3.275999 AGTTTGTGTGTTCGCCTACTTT 58.724 40.909 0.00 0.00 0.00 2.66
3397 3504 5.650266 TGGACAAGACATAAAGTTTGTGTGT 59.350 36.000 21.03 14.99 35.00 3.72
3410 3517 1.338769 GGCGGTTACTGGACAAGACAT 60.339 52.381 0.00 0.00 0.00 3.06
3433 3540 1.667722 CCCTCTTGCCCAAACAAGC 59.332 57.895 0.00 0.00 45.43 4.01
3474 3581 1.130777 ACAAATGGCTTGGGTTGCTT 58.869 45.000 0.00 0.00 39.56 3.91
3475 3582 1.130777 AACAAATGGCTTGGGTTGCT 58.869 45.000 0.00 0.00 39.56 3.91
3476 3583 1.965935 AAACAAATGGCTTGGGTTGC 58.034 45.000 0.00 0.00 39.56 4.17
3477 3584 4.274705 GGTTTAAACAAATGGCTTGGGTTG 59.725 41.667 19.57 0.00 39.56 3.77
3480 3587 3.181450 TGGGTTTAAACAAATGGCTTGGG 60.181 43.478 19.57 0.00 39.56 4.12
3483 3590 5.454613 CCTCTTGGGTTTAAACAAATGGCTT 60.455 40.000 19.57 0.00 0.00 4.35
3485 3592 4.314961 CCTCTTGGGTTTAAACAAATGGC 58.685 43.478 19.57 1.42 0.00 4.40
3487 3594 4.040339 AGGCCTCTTGGGTTTAAACAAATG 59.960 41.667 19.57 9.22 37.43 2.32
3488 3595 4.231273 AGGCCTCTTGGGTTTAAACAAAT 58.769 39.130 19.57 0.00 37.43 2.32
3489 3596 3.639561 GAGGCCTCTTGGGTTTAAACAAA 59.360 43.478 26.25 11.98 37.43 2.83
3490 3597 3.227614 GAGGCCTCTTGGGTTTAAACAA 58.772 45.455 26.25 5.94 37.43 2.83
3491 3598 2.490168 GGAGGCCTCTTGGGTTTAAACA 60.490 50.000 31.36 0.00 37.43 2.83
3492 3599 2.168496 GGAGGCCTCTTGGGTTTAAAC 58.832 52.381 31.36 9.98 37.43 2.01
3493 3600 1.076513 GGGAGGCCTCTTGGGTTTAAA 59.923 52.381 31.36 0.00 37.43 1.52
3494 3601 0.702316 GGGAGGCCTCTTGGGTTTAA 59.298 55.000 31.36 0.00 37.43 1.52
3495 3602 0.178843 AGGGAGGCCTCTTGGGTTTA 60.179 55.000 31.36 0.00 37.43 2.01
3496 3603 1.074296 AAGGGAGGCCTCTTGGGTTT 61.074 55.000 31.36 13.87 37.43 3.27
3497 3604 1.074296 AAAGGGAGGCCTCTTGGGTT 61.074 55.000 31.36 15.62 37.43 4.11
3498 3605 1.074296 AAAAGGGAGGCCTCTTGGGT 61.074 55.000 31.36 12.37 37.43 4.51
3499 3606 0.613012 CAAAAGGGAGGCCTCTTGGG 60.613 60.000 31.36 13.08 38.36 4.12
3500 3607 0.113190 ACAAAAGGGAGGCCTCTTGG 59.887 55.000 31.36 18.11 0.00 3.61
3501 3608 2.001076 AACAAAAGGGAGGCCTCTTG 57.999 50.000 31.36 27.10 0.00 3.02
3502 3609 2.598565 GAAACAAAAGGGAGGCCTCTT 58.401 47.619 31.36 16.81 0.00 2.85
3503 3610 1.545651 CGAAACAAAAGGGAGGCCTCT 60.546 52.381 31.36 11.02 0.00 3.69
3504 3611 0.881796 CGAAACAAAAGGGAGGCCTC 59.118 55.000 25.59 25.59 0.00 4.70
3505 3612 0.539669 CCGAAACAAAAGGGAGGCCT 60.540 55.000 3.86 3.86 0.00 5.19
3506 3613 0.826256 ACCGAAACAAAAGGGAGGCC 60.826 55.000 0.00 0.00 0.00 5.19
3507 3614 1.810755 CTACCGAAACAAAAGGGAGGC 59.189 52.381 0.00 0.00 32.35 4.70
3535 3642 1.809567 GCTTGGGTTGCTTGGGACAG 61.810 60.000 0.00 0.00 42.39 3.51
3575 3682 4.519213 CGTCAATATTGGTGGGGAGTTAA 58.481 43.478 15.36 0.00 0.00 2.01
3576 3683 3.683281 GCGTCAATATTGGTGGGGAGTTA 60.683 47.826 15.36 0.00 0.00 2.24
3617 3724 8.349245 TGTGTTTAAACTTTCATATCAGTGTGG 58.651 33.333 18.72 0.00 0.00 4.17
3657 3764 0.247736 GATAGCTCAGGCCATACCCG 59.752 60.000 5.01 0.00 40.58 5.28
3686 3793 6.180472 TGTCATCTTCTTGTAAGGAAATCCC 58.820 40.000 0.00 0.00 36.42 3.85
3699 3806 4.631813 GCGAAAGGTACATGTCATCTTCTT 59.368 41.667 0.00 0.00 0.00 2.52
3840 3947 8.741841 TCATCAAGATTTCATGTTATGCAAGAA 58.258 29.630 0.00 0.00 33.58 2.52
3879 3986 4.946160 AGGTATTTGGTGAAATCTCCCA 57.054 40.909 0.00 0.00 33.63 4.37
3968 4075 5.890334 TCAACTTTCTTTTCGACAATTGCT 58.110 33.333 5.05 0.00 0.00 3.91
3976 4083 7.713750 TCTCTAGTTCTCAACTTTCTTTTCGA 58.286 34.615 0.00 0.00 42.81 3.71
4022 4129 3.377439 GCGGTTTAGTTTGGGTCTTTTG 58.623 45.455 0.00 0.00 0.00 2.44
4026 4133 0.107268 ACGCGGTTTAGTTTGGGTCT 59.893 50.000 12.47 0.00 0.00 3.85
4036 4143 6.275335 ACTAGCTTCATAATAACGCGGTTTA 58.725 36.000 12.47 6.15 0.00 2.01
4088 4195 2.049063 GTCGCGGTTCAGAGTGCT 60.049 61.111 6.13 0.00 0.00 4.40
4097 4204 1.969589 GTCCATTTGGGTCGCGGTT 60.970 57.895 6.13 0.00 38.11 4.44
4133 4240 2.841442 ACAGGAGCTACCACTGTTTC 57.159 50.000 0.00 0.00 42.38 2.78
4179 4286 4.901849 TCTGTAAAGCTAGTGGCCATATCT 59.098 41.667 9.72 3.65 43.05 1.98
4228 4335 2.276732 TCTGAAAGCTTGGACTTGGG 57.723 50.000 0.00 0.00 0.00 4.12
4229 4336 4.522022 AGAATTCTGAAAGCTTGGACTTGG 59.478 41.667 7.30 0.00 0.00 3.61
4232 4339 3.505293 GCAGAATTCTGAAAGCTTGGACT 59.495 43.478 34.43 0.00 46.59 3.85
4233 4340 3.505293 AGCAGAATTCTGAAAGCTTGGAC 59.495 43.478 34.43 15.13 46.59 4.02
4561 4684 1.342174 CAAACCAGCTCAGCCATTGTT 59.658 47.619 0.00 0.00 0.00 2.83
4577 4706 0.951040 CTCCAGCCTGACGGTCAAAC 60.951 60.000 12.54 7.09 0.00 2.93
4580 4709 1.533033 TTCTCCAGCCTGACGGTCA 60.533 57.895 10.88 10.88 0.00 4.02
4583 4717 1.984570 TCCTTCTCCAGCCTGACGG 60.985 63.158 0.00 0.00 0.00 4.79
4767 4986 2.175202 GAGGAGATGTAGCGGATCCAT 58.825 52.381 13.41 1.69 32.21 3.41
4863 5082 6.936335 TGAAGAGCATGTAGAAGATGTTGAAA 59.064 34.615 0.00 0.00 0.00 2.69
4908 5127 0.612744 TGGTCATGTTGCCGATGAGA 59.387 50.000 0.00 0.00 30.39 3.27
5012 5260 9.657419 ACAAATGAAAAGAAAATCAACTCAACT 57.343 25.926 0.00 0.00 0.00 3.16
5542 5790 0.325577 TGCTCTGCATGACCTCCCTA 60.326 55.000 0.00 0.00 31.71 3.53
5599 5847 1.605453 GGGGCATCGACCAACCTTA 59.395 57.895 0.00 0.00 27.52 2.69
5615 5863 5.437060 AGTAGTAGCAAACATAACATGGGG 58.563 41.667 0.00 0.00 33.60 4.96
5616 5864 7.045416 TGTAGTAGTAGCAAACATAACATGGG 58.955 38.462 0.00 0.00 33.60 4.00
5648 5914 2.410939 CACATCTGACACACACAGAGG 58.589 52.381 0.00 0.00 46.82 3.69
5649 5915 2.410939 CCACATCTGACACACACAGAG 58.589 52.381 0.00 0.00 45.49 3.35
5650 5916 1.541015 GCCACATCTGACACACACAGA 60.541 52.381 0.00 0.00 46.17 3.41
5651 5917 0.870393 GCCACATCTGACACACACAG 59.130 55.000 0.00 0.00 36.80 3.66
5701 5971 4.431809 TGCAACACAACCATTTCTTTCAG 58.568 39.130 0.00 0.00 0.00 3.02
5703 5973 3.245990 GCTGCAACACAACCATTTCTTTC 59.754 43.478 0.00 0.00 0.00 2.62
5704 5974 3.197265 GCTGCAACACAACCATTTCTTT 58.803 40.909 0.00 0.00 0.00 2.52
5707 5977 2.222007 TGCTGCAACACAACCATTTC 57.778 45.000 0.00 0.00 0.00 2.17
5708 5978 2.102757 TGATGCTGCAACACAACCATTT 59.897 40.909 6.36 0.00 0.00 2.32
5931 6211 7.651027 AAATGAGGGAAAATGTGAGGAATAG 57.349 36.000 0.00 0.00 0.00 1.73
5997 6289 1.915614 GCTGTGAGTGGCATCGTTGG 61.916 60.000 0.00 0.00 0.00 3.77
6034 6326 3.760035 CACGCAGCCCTCGTACCT 61.760 66.667 0.00 0.00 38.19 3.08
6082 6374 3.743911 TGTTACTACGTGCCTTTGATGTG 59.256 43.478 0.00 0.00 0.00 3.21
6093 6385 5.505446 GTGTTGTGTTTGTTGTTACTACGTG 59.495 40.000 0.00 0.00 0.00 4.49
6152 6452 2.125269 GCACCGGCCACGAATAGT 60.125 61.111 0.00 0.00 44.60 2.12
6153 6453 1.523711 ATGCACCGGCCACGAATAG 60.524 57.895 0.00 0.00 44.60 1.73
6154 6454 1.817520 CATGCACCGGCCACGAATA 60.818 57.895 0.00 0.00 44.60 1.75
6155 6455 3.133464 CATGCACCGGCCACGAAT 61.133 61.111 0.00 0.00 44.60 3.34
6244 6544 0.458889 GCGCGATGTGGTACAGGTTA 60.459 55.000 12.10 0.00 41.80 2.85
6629 6935 2.040278 CTGGAGCCTCCCCTGTCT 59.960 66.667 8.62 0.00 35.03 3.41
6631 6937 4.748798 CCCTGGAGCCTCCCCTGT 62.749 72.222 8.62 0.00 35.03 4.00
6796 7120 2.590007 CATCCGCAGCTACTGGCC 60.590 66.667 0.00 0.00 43.05 5.36
6895 7221 6.015010 TCCTGAAAGAAAAACCAAACACAGAA 60.015 34.615 0.00 0.00 34.07 3.02
7131 7457 8.930846 AAAATAATTCCAGCTAGCACATATCT 57.069 30.769 18.83 0.00 0.00 1.98
7159 7485 4.561752 ACTGGATTATTCAGGGCTAGAGT 58.438 43.478 5.40 0.00 36.62 3.24
7247 7574 7.508687 TGCAATCTACTGTTGTCCATGTATAT 58.491 34.615 0.00 0.00 0.00 0.86
7327 7654 7.686938 CCGTTTTCTTCGATAAAATGACTACAC 59.313 37.037 19.57 4.17 35.69 2.90
7351 7682 4.747108 GTCCAATCTTGTCTACATCATCCG 59.253 45.833 0.00 0.00 0.00 4.18
7366 7697 2.369394 GCCGATTTCCAAGTCCAATCT 58.631 47.619 0.00 0.00 0.00 2.40
7370 7701 0.404040 AAGGCCGATTTCCAAGTCCA 59.596 50.000 0.00 0.00 0.00 4.02
7404 7735 2.095110 CGGCTCATGATCAAAACAAGCA 60.095 45.455 0.00 0.00 0.00 3.91
7423 7754 0.592637 TTGCAGCTGAAATGTGTCGG 59.407 50.000 20.43 0.00 0.00 4.79
7426 7757 6.028146 TCATAATTTGCAGCTGAAATGTGT 57.972 33.333 20.43 8.34 0.00 3.72
7427 7758 6.366604 TGTTCATAATTTGCAGCTGAAATGTG 59.633 34.615 20.43 19.01 0.00 3.21
7486 7817 5.236478 TGCTTAAGCTCTAAAGTGTGAACAC 59.764 40.000 26.90 5.42 43.52 3.32
7493 7824 6.017933 CGTGAAATGCTTAAGCTCTAAAGTG 58.982 40.000 26.90 8.34 42.66 3.16
7516 7847 0.468226 TTATCCTAAGGGGCACTGCG 59.532 55.000 0.00 0.00 34.39 5.18
7517 7848 2.729028 TTTATCCTAAGGGGCACTGC 57.271 50.000 0.00 0.00 34.39 4.40
7518 7849 5.067805 GTGAATTTTATCCTAAGGGGCACTG 59.932 44.000 0.00 0.00 34.39 3.66
7521 7852 5.044476 TCAGTGAATTTTATCCTAAGGGGCA 60.044 40.000 0.00 0.00 34.39 5.36
7534 7865 6.324770 AGTTCCACAATTCCTCAGTGAATTTT 59.675 34.615 0.00 0.00 41.74 1.82
7550 7887 6.707440 ATGTTCAACATGTAAGTTCCACAA 57.293 33.333 0.98 0.00 37.45 3.33
7563 7900 3.305335 GGAAACGCTGGAATGTTCAACAT 60.305 43.478 0.00 0.00 41.31 2.71
7564 7901 2.034053 GGAAACGCTGGAATGTTCAACA 59.966 45.455 0.00 0.00 0.00 3.33
7632 7969 8.807667 ATAGCAAATCTTTTGTCTTGTTTCAG 57.192 30.769 2.32 0.00 0.00 3.02
7633 7970 9.598517 AAATAGCAAATCTTTTGTCTTGTTTCA 57.401 25.926 2.32 0.00 0.00 2.69
7719 8056 5.270893 TGAGTAATGTAATGCCGCTAGAA 57.729 39.130 0.00 0.00 0.00 2.10
7745 8082 2.115910 CCCATGCCGGTGCCATAT 59.884 61.111 1.90 0.00 36.33 1.78
7806 8143 1.884075 ATAACTCCGCCGCTGTGACA 61.884 55.000 0.00 0.00 0.00 3.58
7807 8144 1.153628 ATAACTCCGCCGCTGTGAC 60.154 57.895 0.00 0.00 0.00 3.67
7811 8148 0.652592 CTTTCATAACTCCGCCGCTG 59.347 55.000 0.00 0.00 0.00 5.18
7834 8171 5.948162 AGATTTGGAAAGAGAGCAATGCTAA 59.052 36.000 8.12 0.00 39.88 3.09
7844 8181 5.786121 ATCTTGGGAGATTTGGAAAGAGA 57.214 39.130 0.00 0.00 39.63 3.10
7866 8203 4.027674 TGCCTCCTTGTTTATGCTTGTA 57.972 40.909 0.00 0.00 0.00 2.41
7887 8224 2.765699 TGCAAACCAAAGAAAGGCTCTT 59.234 40.909 0.00 0.00 46.92 2.85
7918 8255 5.123661 GGTTTGGCATTGGTGATTAAAATGG 59.876 40.000 0.00 0.00 32.96 3.16
7929 8266 1.836802 ACACTTTGGTTTGGCATTGGT 59.163 42.857 0.00 0.00 0.00 3.67
7935 8272 4.058721 AGATTTGACACTTTGGTTTGGC 57.941 40.909 0.00 0.00 0.00 4.52
7936 8273 5.659463 TGAAGATTTGACACTTTGGTTTGG 58.341 37.500 0.00 0.00 0.00 3.28
7947 8284 5.752036 AGTGAGGATCTGAAGATTTGACA 57.248 39.130 0.00 0.00 34.37 3.58
7948 8285 6.634805 TGTAGTGAGGATCTGAAGATTTGAC 58.365 40.000 0.00 0.00 34.37 3.18
7954 8291 5.893824 TGCTAATGTAGTGAGGATCTGAAGA 59.106 40.000 0.00 0.00 34.92 2.87
7956 8293 6.098838 ACATGCTAATGTAGTGAGGATCTGAA 59.901 38.462 0.00 0.00 45.41 3.02
7969 8306 4.103943 TGGATTGGCCTACATGCTAATGTA 59.896 41.667 3.32 0.00 41.74 2.29
8008 8345 3.003173 TTCTCCTGGCGGGTCTGG 61.003 66.667 13.14 1.88 36.25 3.86
8053 8391 4.389374 CTTTTAAGCAAGTGGAGGAGACA 58.611 43.478 0.00 0.00 0.00 3.41
8071 8409 0.108424 TGCAACCTTTGTGCGCTTTT 60.108 45.000 9.73 0.00 0.00 2.27
8072 8410 0.528249 CTGCAACCTTTGTGCGCTTT 60.528 50.000 9.73 0.00 0.00 3.51
8074 8412 1.666209 AACTGCAACCTTTGTGCGCT 61.666 50.000 9.73 0.00 0.00 5.92
8075 8413 1.208642 GAACTGCAACCTTTGTGCGC 61.209 55.000 0.00 0.00 0.00 6.09
8076 8414 0.381801 AGAACTGCAACCTTTGTGCG 59.618 50.000 0.00 0.00 0.00 5.34
8077 8415 1.536709 CCAGAACTGCAACCTTTGTGC 60.537 52.381 0.00 0.00 0.00 4.57
8078 8416 1.536709 GCCAGAACTGCAACCTTTGTG 60.537 52.381 0.00 0.00 0.00 3.33
8079 8417 0.746659 GCCAGAACTGCAACCTTTGT 59.253 50.000 0.00 0.00 0.00 2.83
8080 8418 0.746063 TGCCAGAACTGCAACCTTTG 59.254 50.000 0.00 0.00 35.40 2.77
8081 8419 0.746659 GTGCCAGAACTGCAACCTTT 59.253 50.000 0.00 0.00 41.06 3.11
8084 8422 3.042560 GGTGCCAGAACTGCAACC 58.957 61.111 7.87 7.87 40.58 3.77
8086 8424 2.203480 GGGGTGCCAGAACTGCAA 60.203 61.111 0.00 0.00 41.06 4.08
8088 8426 3.808218 TTGGGGGTGCCAGAACTGC 62.808 63.158 0.00 0.00 0.00 4.40
8089 8427 1.903404 GTTGGGGGTGCCAGAACTG 60.903 63.158 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.