Multiple sequence alignment - TraesCS1B01G278500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G278500 chr1B 100.000 4715 0 0 1 4715 486850109 486845395 0.000000e+00 8708.0
1 TraesCS1B01G278500 chr1B 91.734 617 25 4 1 592 436209490 436208875 0.000000e+00 833.0
2 TraesCS1B01G278500 chr1B 85.830 247 26 3 1033 1270 665293512 665293758 2.180000e-63 254.0
3 TraesCS1B01G278500 chr1B 90.991 111 9 1 3414 3524 635834951 635835060 1.060000e-31 148.0
4 TraesCS1B01G278500 chr1D 91.895 2048 96 31 607 2612 363622223 363620204 0.000000e+00 2798.0
5 TraesCS1B01G278500 chr1D 89.390 1263 65 40 2632 3859 363620218 363618990 0.000000e+00 1526.0
6 TraesCS1B01G278500 chr1D 86.846 669 47 20 4073 4713 363618692 363618037 0.000000e+00 710.0
7 TraesCS1B01G278500 chr1D 95.946 74 3 0 621 694 363624227 363624154 2.300000e-23 121.0
8 TraesCS1B01G278500 chr1A 91.107 1608 92 21 617 2195 462779035 462777450 0.000000e+00 2130.0
9 TraesCS1B01G278500 chr1A 86.254 1455 86 44 2406 3830 462777249 462775879 0.000000e+00 1474.0
10 TraesCS1B01G278500 chr1A 88.859 377 23 8 4121 4482 462775538 462775166 3.350000e-121 446.0
11 TraesCS1B01G278500 chr1A 91.549 71 3 2 4519 4587 462775163 462775094 1.400000e-15 95.3
12 TraesCS1B01G278500 chr3B 92.382 617 22 10 1 592 719428413 719427797 0.000000e+00 856.0
13 TraesCS1B01G278500 chr3B 89.352 216 20 2 1264 1479 655027848 655028060 7.780000e-68 268.0
14 TraesCS1B01G278500 chr3B 88.961 154 17 0 3367 3520 655030150 655030303 1.730000e-44 191.0
15 TraesCS1B01G278500 chr3B 86.755 151 16 4 2419 2565 655029149 655029299 1.050000e-36 165.0
16 TraesCS1B01G278500 chr6B 92.233 618 23 11 1 593 659252875 659253492 0.000000e+00 852.0
17 TraesCS1B01G278500 chr6B 92.084 619 22 12 1 593 487543361 487542744 0.000000e+00 846.0
18 TraesCS1B01G278500 chr6B 91.748 618 26 6 1 593 274216450 274217067 0.000000e+00 835.0
19 TraesCS1B01G278500 chr6B 90.997 622 30 4 1 596 116138701 116138080 0.000000e+00 815.0
20 TraesCS1B01G278500 chr6B 91.086 617 30 9 1 592 523761149 523760533 0.000000e+00 811.0
21 TraesCS1B01G278500 chr6B 92.079 101 8 0 3420 3520 606377055 606376955 4.920000e-30 143.0
22 TraesCS1B01G278500 chr5B 91.883 616 25 11 1 592 654764978 654765592 0.000000e+00 837.0
23 TraesCS1B01G278500 chr5B 90.206 194 17 1 402 593 270434584 270434777 7.830000e-63 252.0
24 TraesCS1B01G278500 chr4B 91.734 617 26 3 1 592 600240011 600240627 0.000000e+00 833.0
25 TraesCS1B01G278500 chr4B 90.645 620 29 6 1 593 82303216 82302599 0.000000e+00 797.0
26 TraesCS1B01G278500 chr4B 93.814 194 10 1 402 593 615310502 615310309 1.660000e-74 291.0
27 TraesCS1B01G278500 chr4B 93.069 101 7 0 3420 3520 147476481 147476581 1.060000e-31 148.0
28 TraesCS1B01G278500 chr7B 91.262 618 28 10 1 592 254118222 254118839 0.000000e+00 819.0
29 TraesCS1B01G278500 chr7B 90.777 618 31 4 1 593 686001376 686001992 0.000000e+00 802.0
30 TraesCS1B01G278500 chr7B 87.788 434 27 10 186 593 501164499 501164932 7.090000e-133 484.0
31 TraesCS1B01G278500 chr2B 91.086 617 29 4 1 592 585191919 585191304 0.000000e+00 811.0
32 TraesCS1B01G278500 chr2B 90.909 616 31 10 1 591 523867308 523867923 0.000000e+00 804.0
33 TraesCS1B01G278500 chr3A 86.816 402 23 14 219 593 32101659 32101261 5.640000e-114 422.0
34 TraesCS1B01G278500 chr3A 89.623 212 19 2 1268 1479 635325594 635325802 2.800000e-67 267.0
35 TraesCS1B01G278500 chr3A 89.610 154 16 0 3367 3520 635327861 635328014 3.720000e-46 196.0
36 TraesCS1B01G278500 chr3A 86.395 147 17 3 2422 2565 635326866 635327012 1.760000e-34 158.0
37 TraesCS1B01G278500 chr3D 89.623 212 19 2 1268 1479 496071019 496071227 2.800000e-67 267.0
38 TraesCS1B01G278500 chr3D 90.260 154 15 0 3367 3520 496073326 496073479 8.000000e-48 202.0
39 TraesCS1B01G278500 chr3D 86.000 150 15 6 2419 2563 496072306 496072454 6.320000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G278500 chr1B 486845395 486850109 4714 True 8708.000000 8708 100.000000 1 4715 1 chr1B.!!$R2 4714
1 TraesCS1B01G278500 chr1B 436208875 436209490 615 True 833.000000 833 91.734000 1 592 1 chr1B.!!$R1 591
2 TraesCS1B01G278500 chr1D 363618037 363624227 6190 True 1288.750000 2798 91.019250 607 4713 4 chr1D.!!$R1 4106
3 TraesCS1B01G278500 chr1A 462775094 462779035 3941 True 1036.325000 2130 89.442250 617 4587 4 chr1A.!!$R1 3970
4 TraesCS1B01G278500 chr3B 719427797 719428413 616 True 856.000000 856 92.382000 1 592 1 chr3B.!!$R1 591
5 TraesCS1B01G278500 chr3B 655027848 655030303 2455 False 208.000000 268 88.356000 1264 3520 3 chr3B.!!$F1 2256
6 TraesCS1B01G278500 chr6B 659252875 659253492 617 False 852.000000 852 92.233000 1 593 1 chr6B.!!$F2 592
7 TraesCS1B01G278500 chr6B 487542744 487543361 617 True 846.000000 846 92.084000 1 593 1 chr6B.!!$R2 592
8 TraesCS1B01G278500 chr6B 274216450 274217067 617 False 835.000000 835 91.748000 1 593 1 chr6B.!!$F1 592
9 TraesCS1B01G278500 chr6B 116138080 116138701 621 True 815.000000 815 90.997000 1 596 1 chr6B.!!$R1 595
10 TraesCS1B01G278500 chr6B 523760533 523761149 616 True 811.000000 811 91.086000 1 592 1 chr6B.!!$R3 591
11 TraesCS1B01G278500 chr5B 654764978 654765592 614 False 837.000000 837 91.883000 1 592 1 chr5B.!!$F2 591
12 TraesCS1B01G278500 chr4B 600240011 600240627 616 False 833.000000 833 91.734000 1 592 1 chr4B.!!$F2 591
13 TraesCS1B01G278500 chr4B 82302599 82303216 617 True 797.000000 797 90.645000 1 593 1 chr4B.!!$R1 592
14 TraesCS1B01G278500 chr7B 254118222 254118839 617 False 819.000000 819 91.262000 1 592 1 chr7B.!!$F1 591
15 TraesCS1B01G278500 chr7B 686001376 686001992 616 False 802.000000 802 90.777000 1 593 1 chr7B.!!$F3 592
16 TraesCS1B01G278500 chr2B 585191304 585191919 615 True 811.000000 811 91.086000 1 592 1 chr2B.!!$R1 591
17 TraesCS1B01G278500 chr2B 523867308 523867923 615 False 804.000000 804 90.909000 1 591 1 chr2B.!!$F1 590
18 TraesCS1B01G278500 chr3A 635325594 635328014 2420 False 207.000000 267 88.542667 1268 3520 3 chr3A.!!$F1 2252
19 TraesCS1B01G278500 chr3D 496071019 496073479 2460 False 208.333333 267 88.627667 1268 3520 3 chr3D.!!$F1 2252

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
614 644 0.031414 AAGGTACGGAGCCTACCCAT 60.031 55.0 0.0 1.14 35.13 4.00 F
904 2979 0.321653 CCTTTTCTGAGTCCACCCCG 60.322 60.0 0.0 0.00 0.00 5.73 F
2619 5239 0.179045 ACAAGATGCATAGACCCCGC 60.179 55.0 0.0 0.00 0.00 6.13 F
3141 6009 0.032416 GGAGGAGTACTGTGGGGCTA 60.032 60.0 0.0 0.00 0.00 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2336 4937 0.254747 CCTCCCATTTCACGGGCTAA 59.745 55.0 0.00 0.0 44.11 3.09 R
2851 5712 0.899019 TTATCACACACGGGCAGCTA 59.101 50.0 0.00 0.0 0.00 3.32 R
3650 6651 0.101040 ACAAGCATGCACACACACAC 59.899 50.0 21.98 0.0 0.00 3.82 R
3957 7021 0.250858 TGCAGGTGTGTTCATCCTGG 60.251 55.0 19.58 0.0 46.03 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
462 490 1.948104 CAGGACAGTGTTTCCGACAA 58.052 50.000 0.00 0.00 40.65 3.18
561 591 1.982073 GACTAATTTGCAGCGCGGCT 61.982 55.000 31.56 15.21 40.77 5.52
593 623 1.093159 GGCTGTTGGAGATGCTCTTG 58.907 55.000 0.00 0.00 0.00 3.02
594 624 1.339438 GGCTGTTGGAGATGCTCTTGA 60.339 52.381 0.00 0.00 0.00 3.02
597 627 3.119919 GCTGTTGGAGATGCTCTTGAAAG 60.120 47.826 0.00 0.00 0.00 2.62
598 628 3.415212 TGTTGGAGATGCTCTTGAAAGG 58.585 45.455 0.00 0.00 0.00 3.11
599 629 3.181440 TGTTGGAGATGCTCTTGAAAGGT 60.181 43.478 0.00 0.00 0.00 3.50
600 630 4.041567 TGTTGGAGATGCTCTTGAAAGGTA 59.958 41.667 0.00 0.00 0.00 3.08
601 631 4.207891 TGGAGATGCTCTTGAAAGGTAC 57.792 45.455 0.00 0.00 0.00 3.34
602 632 3.190874 GGAGATGCTCTTGAAAGGTACG 58.809 50.000 0.00 0.00 0.00 3.67
603 633 3.190874 GAGATGCTCTTGAAAGGTACGG 58.809 50.000 0.00 0.00 0.00 4.02
604 634 2.832129 AGATGCTCTTGAAAGGTACGGA 59.168 45.455 0.00 0.00 0.00 4.69
605 635 2.743636 TGCTCTTGAAAGGTACGGAG 57.256 50.000 0.00 0.00 0.00 4.63
606 636 1.337823 TGCTCTTGAAAGGTACGGAGC 60.338 52.381 0.00 0.00 44.16 4.70
607 637 2.007547 GCTCTTGAAAGGTACGGAGCC 61.008 57.143 0.00 0.00 39.86 4.70
608 638 1.550976 CTCTTGAAAGGTACGGAGCCT 59.449 52.381 0.00 0.00 38.11 4.58
609 639 2.758979 CTCTTGAAAGGTACGGAGCCTA 59.241 50.000 0.00 0.00 34.81 3.93
610 640 2.494870 TCTTGAAAGGTACGGAGCCTAC 59.505 50.000 0.00 0.00 34.81 3.18
611 641 1.188863 TGAAAGGTACGGAGCCTACC 58.811 55.000 0.00 0.00 34.81 3.18
612 642 0.463204 GAAAGGTACGGAGCCTACCC 59.537 60.000 0.00 0.00 35.13 3.69
613 643 0.252375 AAAGGTACGGAGCCTACCCA 60.252 55.000 0.00 0.00 35.13 4.51
614 644 0.031414 AAGGTACGGAGCCTACCCAT 60.031 55.000 0.00 1.14 35.13 4.00
615 645 0.855598 AGGTACGGAGCCTACCCATA 59.144 55.000 0.00 0.00 35.13 2.74
630 660 1.416401 CCCATACGGACCAGCATTAGT 59.584 52.381 0.00 0.00 0.00 2.24
641 671 5.340439 ACCAGCATTAGTGTCCTAACTAC 57.660 43.478 0.00 0.00 36.03 2.73
675 2724 1.300620 CTGAACAAGTGTCGCCCGA 60.301 57.895 0.00 0.00 0.00 5.14
778 2848 3.760684 CCTTCTTTGGACTTGCTAATGCT 59.239 43.478 0.00 0.00 40.48 3.79
780 2850 5.415701 CCTTCTTTGGACTTGCTAATGCTAA 59.584 40.000 0.00 0.00 40.48 3.09
781 2851 6.096001 CCTTCTTTGGACTTGCTAATGCTAAT 59.904 38.462 0.00 0.00 40.48 1.73
782 2852 6.441093 TCTTTGGACTTGCTAATGCTAATG 57.559 37.500 0.00 0.00 40.48 1.90
783 2853 4.637483 TTGGACTTGCTAATGCTAATGC 57.363 40.909 0.00 0.00 40.48 3.56
784 2854 3.889815 TGGACTTGCTAATGCTAATGCT 58.110 40.909 0.00 0.00 40.48 3.79
785 2855 3.628942 TGGACTTGCTAATGCTAATGCTG 59.371 43.478 0.00 0.00 40.48 4.41
820 2890 1.467342 CAACGGCTAGGGCTTTGTAAC 59.533 52.381 0.00 0.00 38.73 2.50
873 2948 2.623878 TTGTGTATTCACCCGTGTGT 57.376 45.000 0.00 0.00 43.26 3.72
892 2967 0.468226 TGCGACCTGTGTCCTTTTCT 59.532 50.000 0.00 0.00 38.32 2.52
903 2978 1.064825 TCCTTTTCTGAGTCCACCCC 58.935 55.000 0.00 0.00 0.00 4.95
904 2979 0.321653 CCTTTTCTGAGTCCACCCCG 60.322 60.000 0.00 0.00 0.00 5.73
905 2980 0.396811 CTTTTCTGAGTCCACCCCGT 59.603 55.000 0.00 0.00 0.00 5.28
1605 3999 7.036996 TGTTTTGCATCTCATTACACTTGAA 57.963 32.000 0.00 0.00 0.00 2.69
1606 4000 7.487484 TGTTTTGCATCTCATTACACTTGAAA 58.513 30.769 0.00 0.00 0.00 2.69
1733 4130 4.546829 AAACGACCTTAAGCACTGGATA 57.453 40.909 0.00 0.00 0.00 2.59
1739 4136 5.542779 GACCTTAAGCACTGGATATAGTGG 58.457 45.833 7.57 0.00 46.32 4.00
1766 4163 3.539604 AGAATGCTGCCTGCTTAACTAG 58.460 45.455 0.00 0.00 43.37 2.57
1863 4260 0.758734 AAGGACACTGCACTGCACTA 59.241 50.000 0.00 0.00 33.79 2.74
1903 4372 2.108168 CCTGTGCTAGCCTAGTTGGTA 58.892 52.381 13.29 0.00 38.35 3.25
1905 4374 2.761208 CTGTGCTAGCCTAGTTGGTACT 59.239 50.000 13.29 0.00 38.35 2.73
1993 4472 6.484288 AGGTAGAGATGTAGATCAGATCAGG 58.516 44.000 13.14 0.00 29.15 3.86
2012 4494 6.579666 TCAGGACATTCATGAAAAGGAAAG 57.420 37.500 13.09 0.84 33.94 2.62
2113 4602 0.323451 AATCGAGGTTGGAAAGGGGC 60.323 55.000 0.00 0.00 0.00 5.80
2144 4634 3.546543 TTCCCGCCTAGATGCCCG 61.547 66.667 0.00 0.00 0.00 6.13
2199 4689 6.058553 TGTAGCCTAGTCTTGTACTGTAGA 57.941 41.667 0.00 0.00 39.39 2.59
2202 4692 5.817784 AGCCTAGTCTTGTACTGTAGAAGA 58.182 41.667 19.83 19.83 39.39 2.87
2203 4693 6.246919 AGCCTAGTCTTGTACTGTAGAAGAA 58.753 40.000 23.81 12.17 39.41 2.52
2205 4695 6.807720 GCCTAGTCTTGTACTGTAGAAGAAAC 59.192 42.308 23.81 15.46 39.41 2.78
2206 4696 7.314393 CCTAGTCTTGTACTGTAGAAGAAACC 58.686 42.308 23.81 14.45 39.41 3.27
2208 4698 7.362802 AGTCTTGTACTGTAGAAGAAACCTT 57.637 36.000 23.81 9.04 39.41 3.50
2209 4699 7.793036 AGTCTTGTACTGTAGAAGAAACCTTT 58.207 34.615 23.81 7.68 39.41 3.11
2210 4700 8.921205 AGTCTTGTACTGTAGAAGAAACCTTTA 58.079 33.333 23.81 2.55 39.41 1.85
2303 4904 4.055360 TCGGAGTGTACTTGTGATTGTTG 58.945 43.478 0.00 0.00 0.00 3.33
2336 4937 2.129823 ATTCACTGTTCGTCGTCGTT 57.870 45.000 1.33 0.00 38.33 3.85
2358 4959 2.677228 CCGTGAAATGGGAGGGCT 59.323 61.111 0.00 0.00 40.17 5.19
2359 4960 1.452108 CCGTGAAATGGGAGGGCTC 60.452 63.158 0.00 0.00 40.17 4.70
2360 4961 1.815421 CGTGAAATGGGAGGGCTCG 60.815 63.158 0.00 0.00 0.00 5.03
2372 4975 2.126031 GGCTCGTCGTCCCTTCAC 60.126 66.667 0.00 0.00 0.00 3.18
2391 4994 1.683365 ATTCACAGTGCCCCATGCC 60.683 57.895 0.00 0.00 40.16 4.40
2410 5013 2.684881 GCCGGCTACTACTACAGTGTTA 59.315 50.000 22.15 0.00 38.24 2.41
2454 5057 1.615424 TTAGGTGGAGGTGGAGGCC 60.615 63.158 0.00 0.00 0.00 5.19
2618 5238 1.586422 CACAAGATGCATAGACCCCG 58.414 55.000 0.00 0.00 0.00 5.73
2619 5239 0.179045 ACAAGATGCATAGACCCCGC 60.179 55.000 0.00 0.00 0.00 6.13
2620 5240 0.179048 CAAGATGCATAGACCCCGCA 60.179 55.000 0.00 0.00 40.50 5.69
2621 5241 0.546122 AAGATGCATAGACCCCGCAA 59.454 50.000 0.00 0.00 39.48 4.85
2622 5242 0.546122 AGATGCATAGACCCCGCAAA 59.454 50.000 0.00 0.00 39.48 3.68
2623 5243 1.064758 AGATGCATAGACCCCGCAAAA 60.065 47.619 0.00 0.00 39.48 2.44
2624 5244 1.748493 GATGCATAGACCCCGCAAAAA 59.252 47.619 0.00 0.00 39.48 1.94
2807 5668 5.582665 AGCCTTTCACGATACAAAGATCTTC 59.417 40.000 8.78 0.00 32.20 2.87
2851 5712 3.941483 CCATACAAGCGGAGAAAGTTGAT 59.059 43.478 0.00 0.00 0.00 2.57
2902 5763 4.950475 AGGGATTTTTAGGCTCAGCTTAAC 59.050 41.667 0.00 0.00 30.16 2.01
3015 5882 7.196331 GGCTCTGCCTTTTTACTGTATTATTG 58.804 38.462 0.73 0.00 46.69 1.90
3141 6009 0.032416 GGAGGAGTACTGTGGGGCTA 60.032 60.000 0.00 0.00 0.00 3.93
3142 6010 1.112950 GAGGAGTACTGTGGGGCTAC 58.887 60.000 0.00 0.00 0.00 3.58
3184 6052 1.895707 GCTGACTTGCTGCTGGTGT 60.896 57.895 0.00 0.00 38.32 4.16
3216 6087 2.016961 CATGTAGTCATGTGGCGGC 58.983 57.895 0.00 0.00 44.37 6.53
3219 6090 0.899019 TGTAGTCATGTGGCGGCTTA 59.101 50.000 11.43 0.00 0.00 3.09
3222 6093 1.165270 AGTCATGTGGCGGCTTAAAC 58.835 50.000 11.43 0.00 0.00 2.01
3263 6136 5.071250 TGACAGCCTCTGAAAAGTTACCTTA 59.929 40.000 0.29 0.00 35.18 2.69
3306 6213 0.941542 TGTTGAGCGGCAAGTGTTAC 59.058 50.000 1.45 0.00 37.12 2.50
3327 6234 7.881232 TGTTACCCTAATCACCTTGTTAAAGAG 59.119 37.037 0.00 0.00 35.19 2.85
3330 6237 5.880887 CCCTAATCACCTTGTTAAAGAGGTC 59.119 44.000 7.82 0.00 44.28 3.85
3333 6240 6.884280 AATCACCTTGTTAAAGAGGTCTTG 57.116 37.500 7.82 0.00 44.28 3.02
3334 6241 5.623956 TCACCTTGTTAAAGAGGTCTTGA 57.376 39.130 7.82 1.97 44.28 3.02
3339 6246 5.278022 CCTTGTTAAAGAGGTCTTGAGTTGC 60.278 44.000 0.00 0.00 36.12 4.17
3340 6247 5.036117 TGTTAAAGAGGTCTTGAGTTGCT 57.964 39.130 0.00 0.00 36.12 3.91
3341 6248 4.816385 TGTTAAAGAGGTCTTGAGTTGCTG 59.184 41.667 0.00 0.00 36.12 4.41
3342 6249 3.845781 AAAGAGGTCTTGAGTTGCTGA 57.154 42.857 0.00 0.00 36.12 4.26
3343 6250 2.829741 AGAGGTCTTGAGTTGCTGAC 57.170 50.000 0.00 0.00 0.00 3.51
3344 6251 2.042464 AGAGGTCTTGAGTTGCTGACA 58.958 47.619 0.00 0.00 0.00 3.58
3345 6252 2.435805 AGAGGTCTTGAGTTGCTGACAA 59.564 45.455 0.00 0.00 0.00 3.18
3346 6253 2.805099 GAGGTCTTGAGTTGCTGACAAG 59.195 50.000 0.00 0.00 41.27 3.16
3348 6255 2.945668 GGTCTTGAGTTGCTGACAAGTT 59.054 45.455 0.00 0.00 39.60 2.66
3356 6266 3.258123 AGTTGCTGACAAGTTTTGTGGTT 59.742 39.130 0.00 0.00 45.52 3.67
3357 6267 4.461081 AGTTGCTGACAAGTTTTGTGGTTA 59.539 37.500 0.00 0.00 45.52 2.85
3359 6269 3.181505 TGCTGACAAGTTTTGTGGTTACG 60.182 43.478 0.00 0.00 45.52 3.18
3521 6517 3.241530 TGGCTCCTGGCTTGACGT 61.242 61.111 0.00 0.00 41.46 4.34
3535 6531 2.281140 TGACGTTCGTTCACTCACAA 57.719 45.000 0.00 0.00 0.00 3.33
3561 6557 3.126453 AGCCTCCCTGGATGATTTTACT 58.874 45.455 0.00 0.00 38.35 2.24
3608 6605 1.421268 TCACTGCAACAATGACCCTCT 59.579 47.619 0.00 0.00 0.00 3.69
3650 6651 1.933181 TCTGTGCGTGTGTTTTCTCTG 59.067 47.619 0.00 0.00 0.00 3.35
3652 6653 1.396648 TGTGCGTGTGTTTTCTCTGTG 59.603 47.619 0.00 0.00 0.00 3.66
3654 6655 1.396648 TGCGTGTGTTTTCTCTGTGTG 59.603 47.619 0.00 0.00 0.00 3.82
3656 6657 2.787723 GCGTGTGTTTTCTCTGTGTGTG 60.788 50.000 0.00 0.00 0.00 3.82
3658 6659 3.724716 CGTGTGTTTTCTCTGTGTGTGTG 60.725 47.826 0.00 0.00 0.00 3.82
3661 6662 2.161410 TGTTTTCTCTGTGTGTGTGTGC 59.839 45.455 0.00 0.00 0.00 4.57
3662 6663 2.106477 TTTCTCTGTGTGTGTGTGCA 57.894 45.000 0.00 0.00 0.00 4.57
3663 6664 2.330440 TTCTCTGTGTGTGTGTGCAT 57.670 45.000 0.00 0.00 0.00 3.96
3664 6665 1.585297 TCTCTGTGTGTGTGTGCATG 58.415 50.000 0.00 0.00 0.00 4.06
3665 6666 0.040692 CTCTGTGTGTGTGTGCATGC 60.041 55.000 11.82 11.82 0.00 4.06
3666 6667 0.464193 TCTGTGTGTGTGTGCATGCT 60.464 50.000 20.33 0.00 0.00 3.79
3671 6672 0.101040 GTGTGTGTGCATGCTTGTGT 59.899 50.000 20.33 0.00 0.00 3.72
3673 6687 1.066093 TGTGTGCATGCTTGTGTGC 59.934 52.632 20.33 2.94 41.61 4.57
3698 6712 6.149633 GTGTGTTGTCATTCCTTGGTTAATC 58.850 40.000 0.00 0.00 0.00 1.75
3817 6837 0.321387 AGCAGGACACAGTGCATGAG 60.321 55.000 12.05 0.00 42.47 2.90
3820 6840 0.036577 AGGACACAGTGCATGAGCTC 60.037 55.000 6.82 6.82 42.74 4.09
3821 6841 0.036577 GGACACAGTGCATGAGCTCT 60.037 55.000 16.19 0.00 44.82 4.09
3824 6844 1.066573 ACACAGTGCATGAGCTCTACC 60.067 52.381 16.19 3.27 42.28 3.18
3825 6845 1.066645 CACAGTGCATGAGCTCTACCA 60.067 52.381 16.19 5.99 42.28 3.25
3826 6846 1.836166 ACAGTGCATGAGCTCTACCAT 59.164 47.619 16.19 0.00 42.28 3.55
3828 6848 3.276857 CAGTGCATGAGCTCTACCATTT 58.723 45.455 16.19 0.00 42.28 2.32
3829 6849 3.064958 CAGTGCATGAGCTCTACCATTTG 59.935 47.826 16.19 7.85 42.28 2.32
3830 6850 3.012518 GTGCATGAGCTCTACCATTTGT 58.987 45.455 16.19 0.00 42.74 2.83
3831 6851 3.011818 TGCATGAGCTCTACCATTTGTG 58.988 45.455 16.19 1.56 42.74 3.33
3832 6852 3.273434 GCATGAGCTCTACCATTTGTGA 58.727 45.455 16.19 0.00 37.91 3.58
3833 6853 3.881688 GCATGAGCTCTACCATTTGTGAT 59.118 43.478 16.19 0.00 37.91 3.06
3834 6854 5.059161 GCATGAGCTCTACCATTTGTGATA 58.941 41.667 16.19 0.00 37.91 2.15
3835 6855 5.528690 GCATGAGCTCTACCATTTGTGATAA 59.471 40.000 16.19 0.00 37.91 1.75
3836 6856 6.206243 GCATGAGCTCTACCATTTGTGATAAT 59.794 38.462 16.19 0.00 37.91 1.28
3837 6857 7.388776 GCATGAGCTCTACCATTTGTGATAATA 59.611 37.037 16.19 0.00 37.91 0.98
3842 6862 9.424319 AGCTCTACCATTTGTGATAATATTACG 57.576 33.333 0.00 0.00 0.00 3.18
3847 6867 6.077197 CCATTTGTGATAATATTACGCCACG 58.923 40.000 14.50 0.00 0.00 4.94
3853 6873 5.899696 GTGATAATATTACGCCACGTGTTTG 59.100 40.000 15.65 6.09 41.39 2.93
3869 6894 7.044576 CCACGTGTTTGTTTGTATTTGAAGTAC 60.045 37.037 15.65 0.00 0.00 2.73
3873 6898 8.751335 GTGTTTGTTTGTATTTGAAGTACCATG 58.249 33.333 0.00 0.00 0.00 3.66
3877 6902 8.402798 TGTTTGTATTTGAAGTACCATGTGAT 57.597 30.769 0.00 0.00 0.00 3.06
3881 6906 4.764679 TTTGAAGTACCATGTGATGTGC 57.235 40.909 0.00 0.00 0.00 4.57
3883 6908 3.599343 TGAAGTACCATGTGATGTGCTC 58.401 45.455 0.00 0.00 0.00 4.26
3888 6913 0.458370 CCATGTGATGTGCTCGACGA 60.458 55.000 0.00 0.00 0.00 4.20
3890 6915 0.458543 ATGTGATGTGCTCGACGACC 60.459 55.000 0.00 0.00 0.00 4.79
3896 6921 1.299926 GTGCTCGACGACCAACTGT 60.300 57.895 0.00 0.00 0.00 3.55
3902 6927 0.109689 CGACGACCAACTGTCTCCTC 60.110 60.000 0.00 0.00 42.13 3.71
3903 6928 0.109689 GACGACCAACTGTCTCCTCG 60.110 60.000 0.00 0.00 42.13 4.63
3904 6929 1.213013 CGACCAACTGTCTCCTCGG 59.787 63.158 0.00 0.00 42.13 4.63
3905 6930 1.524863 CGACCAACTGTCTCCTCGGT 61.525 60.000 0.00 0.00 42.13 4.69
3906 6931 0.244178 GACCAACTGTCTCCTCGGTC 59.756 60.000 0.00 0.00 41.03 4.79
3907 6932 1.213013 CCAACTGTCTCCTCGGTCG 59.787 63.158 0.00 0.00 0.00 4.79
3908 6933 1.213013 CAACTGTCTCCTCGGTCGG 59.787 63.158 0.00 0.00 0.00 4.79
3909 6934 2.637383 AACTGTCTCCTCGGTCGGC 61.637 63.158 0.00 0.00 0.00 5.54
3910 6935 3.827898 CTGTCTCCTCGGTCGGCC 61.828 72.222 0.00 0.00 0.00 6.13
3927 6952 4.462417 CGCTCGCTCGTTCGTCCT 62.462 66.667 0.00 0.00 0.00 3.85
3929 6954 1.136147 GCTCGCTCGTTCGTCCTTA 59.864 57.895 0.00 0.00 0.00 2.69
3930 6955 0.455633 GCTCGCTCGTTCGTCCTTAA 60.456 55.000 0.00 0.00 0.00 1.85
3939 6967 5.290158 GCTCGTTCGTCCTTAATTAACATGA 59.710 40.000 0.00 0.00 0.00 3.07
3940 6968 6.018994 GCTCGTTCGTCCTTAATTAACATGAT 60.019 38.462 0.00 0.00 0.00 2.45
3941 6969 7.459394 TCGTTCGTCCTTAATTAACATGATC 57.541 36.000 0.00 0.00 0.00 2.92
3942 6970 6.197655 TCGTTCGTCCTTAATTAACATGATCG 59.802 38.462 0.00 13.27 0.00 3.69
3943 6971 6.020121 CGTTCGTCCTTAATTAACATGATCGT 60.020 38.462 0.00 0.00 0.00 3.73
3945 6973 7.459394 TCGTCCTTAATTAACATGATCGTTC 57.541 36.000 0.00 0.00 0.00 3.95
3946 6974 7.262772 TCGTCCTTAATTAACATGATCGTTCT 58.737 34.615 0.00 0.00 0.00 3.01
3947 6975 7.762615 TCGTCCTTAATTAACATGATCGTTCTT 59.237 33.333 0.00 0.00 0.00 2.52
3948 6976 9.027129 CGTCCTTAATTAACATGATCGTTCTTA 57.973 33.333 0.00 0.00 0.00 2.10
3957 7021 7.527084 AACATGATCGTTCTTAGTTAAGCTC 57.473 36.000 0.00 0.00 33.40 4.09
3958 7022 6.043411 ACATGATCGTTCTTAGTTAAGCTCC 58.957 40.000 0.00 0.00 33.40 4.70
3967 7031 5.978814 TCTTAGTTAAGCTCCAGGATGAAC 58.021 41.667 0.00 0.00 33.35 3.18
3970 7034 3.327757 AGTTAAGCTCCAGGATGAACACA 59.672 43.478 0.00 0.00 39.69 3.72
3980 7044 1.537202 GGATGAACACACCTGCAAGAC 59.463 52.381 0.00 0.00 34.07 3.01
3981 7045 2.221169 GATGAACACACCTGCAAGACA 58.779 47.619 0.00 0.00 34.07 3.41
3982 7046 1.378531 TGAACACACCTGCAAGACAC 58.621 50.000 0.00 0.00 34.07 3.67
3983 7047 1.339535 TGAACACACCTGCAAGACACA 60.340 47.619 0.00 0.00 34.07 3.72
3985 7049 0.541392 ACACACCTGCAAGACACAGA 59.459 50.000 0.00 0.00 37.32 3.41
3992 7074 2.287427 CCTGCAAGACACAGAAAGCTTG 60.287 50.000 0.00 0.00 40.40 4.01
3995 7077 2.874701 GCAAGACACAGAAAGCTTGAGA 59.125 45.455 0.00 0.00 39.97 3.27
3997 7079 4.201950 GCAAGACACAGAAAGCTTGAGAAA 60.202 41.667 0.00 0.00 39.97 2.52
3999 7081 5.491635 AGACACAGAAAGCTTGAGAAAAC 57.508 39.130 0.00 0.00 0.00 2.43
4001 7083 5.415701 AGACACAGAAAGCTTGAGAAAACAA 59.584 36.000 0.00 0.00 0.00 2.83
4003 7085 6.095377 ACACAGAAAGCTTGAGAAAACAAAG 58.905 36.000 0.00 0.00 0.00 2.77
4005 7087 6.471519 CACAGAAAGCTTGAGAAAACAAAGAG 59.528 38.462 0.00 0.00 0.00 2.85
4007 7089 6.911511 CAGAAAGCTTGAGAAAACAAAGAGAG 59.088 38.462 0.00 0.00 0.00 3.20
4011 7093 5.882557 AGCTTGAGAAAACAAAGAGAGACAA 59.117 36.000 0.00 0.00 0.00 3.18
4016 7098 6.655003 TGAGAAAACAAAGAGAGACAAACACT 59.345 34.615 0.00 0.00 0.00 3.55
4017 7099 6.846350 AGAAAACAAAGAGAGACAAACACTG 58.154 36.000 0.00 0.00 0.00 3.66
4019 7101 6.817765 AAACAAAGAGAGACAAACACTGAA 57.182 33.333 0.00 0.00 0.00 3.02
4020 7102 6.428385 AACAAAGAGAGACAAACACTGAAG 57.572 37.500 0.00 0.00 0.00 3.02
4021 7103 5.491982 ACAAAGAGAGACAAACACTGAAGT 58.508 37.500 0.00 0.00 0.00 3.01
4023 7105 7.275920 ACAAAGAGAGACAAACACTGAAGTAT 58.724 34.615 0.00 0.00 0.00 2.12
4024 7106 7.225538 ACAAAGAGAGACAAACACTGAAGTATG 59.774 37.037 0.00 0.00 0.00 2.39
4025 7107 5.233988 AGAGAGACAAACACTGAAGTATGC 58.766 41.667 0.00 0.00 0.00 3.14
4026 7108 4.960938 AGAGACAAACACTGAAGTATGCA 58.039 39.130 0.00 0.00 0.00 3.96
4027 7109 5.555017 AGAGACAAACACTGAAGTATGCAT 58.445 37.500 3.79 3.79 0.00 3.96
4028 7110 5.641209 AGAGACAAACACTGAAGTATGCATC 59.359 40.000 0.19 0.00 0.00 3.91
4029 7111 5.308014 AGACAAACACTGAAGTATGCATCA 58.692 37.500 0.19 0.00 0.00 3.07
4039 7196 6.915544 TGAAGTATGCATCAGTTCAGATTC 57.084 37.500 0.19 0.00 31.88 2.52
4060 7217 2.394136 CGCACGCGTGATGGTTAC 59.606 61.111 41.19 20.75 34.35 2.50
4061 7218 2.782615 GCACGCGTGATGGTTACC 59.217 61.111 41.19 17.94 0.00 2.85
4062 7219 3.077705 CACGCGTGATGGTTACCG 58.922 61.111 34.93 1.79 0.00 4.02
4063 7220 1.444724 CACGCGTGATGGTTACCGA 60.445 57.895 34.93 0.00 0.00 4.69
4064 7221 1.444895 ACGCGTGATGGTTACCGAC 60.445 57.895 12.93 0.00 0.00 4.79
4065 7222 1.153901 CGCGTGATGGTTACCGACT 60.154 57.895 0.00 0.00 0.00 4.18
4066 7223 0.099259 CGCGTGATGGTTACCGACTA 59.901 55.000 0.00 0.00 0.00 2.59
4067 7224 1.553308 GCGTGATGGTTACCGACTAC 58.447 55.000 0.00 0.00 0.00 2.73
4068 7225 1.800286 GCGTGATGGTTACCGACTACC 60.800 57.143 0.00 0.00 34.93 3.18
4070 7227 2.479049 CGTGATGGTTACCGACTACCAG 60.479 54.545 0.00 0.00 46.82 4.00
4071 7228 2.494870 GTGATGGTTACCGACTACCAGT 59.505 50.000 0.00 0.00 46.82 4.00
4072 7229 3.696051 GTGATGGTTACCGACTACCAGTA 59.304 47.826 0.00 0.00 46.82 2.74
4073 7230 3.696051 TGATGGTTACCGACTACCAGTAC 59.304 47.826 0.00 0.00 46.82 2.73
4074 7231 2.083774 TGGTTACCGACTACCAGTACG 58.916 52.381 0.00 0.00 39.44 3.67
4075 7232 1.401905 GGTTACCGACTACCAGTACGG 59.598 57.143 0.00 0.00 41.41 4.02
4092 7249 2.522367 GGTGTCCCCCGTTCAAGGA 61.522 63.158 0.00 0.00 0.00 3.36
4097 7254 4.404098 CCCCGTTCAAGGACCCCG 62.404 72.222 0.00 0.00 0.00 5.73
4102 7259 1.823169 CGTTCAAGGACCCCGAGGAA 61.823 60.000 0.00 0.00 36.73 3.36
4104 7261 0.473117 TTCAAGGACCCCGAGGAAGT 60.473 55.000 0.00 0.00 36.73 3.01
4109 7266 1.757340 GACCCCGAGGAAGTCCGAT 60.757 63.158 0.00 0.00 42.08 4.18
4110 7267 1.736365 GACCCCGAGGAAGTCCGATC 61.736 65.000 0.00 0.00 42.08 3.69
4133 7297 1.669760 GTGCCACGAACGGGAATCA 60.670 57.895 0.00 0.00 0.00 2.57
4277 7448 2.666190 CCGCCCGGTGCTATCATG 60.666 66.667 12.26 0.00 38.05 3.07
4299 7470 1.930503 TGACGTGTAACACTGTGCTTG 59.069 47.619 7.90 0.00 35.74 4.01
4306 7477 1.039233 AACACTGTGCTTGCCTGCTT 61.039 50.000 7.90 0.00 0.00 3.91
4339 7514 7.462972 GCTATCCTATCCTATCCTATCCTCCTA 59.537 44.444 0.00 0.00 0.00 2.94
4343 7518 7.795659 TCCTATCCTATCCTATCCTCCTACTAC 59.204 44.444 0.00 0.00 0.00 2.73
4449 7632 3.450817 TCATGATTCGTCTTCAAGGGCTA 59.549 43.478 0.00 0.00 0.00 3.93
4493 7676 1.637553 ACTGTGGAGCCATTCAATCCT 59.362 47.619 0.00 0.00 34.04 3.24
4523 7706 0.034896 CGGCAGTCTGGTTGGTACTT 59.965 55.000 1.14 0.00 0.00 2.24
4524 7707 1.523758 GGCAGTCTGGTTGGTACTTG 58.476 55.000 1.14 0.00 0.00 3.16
4525 7708 1.523758 GCAGTCTGGTTGGTACTTGG 58.476 55.000 1.14 0.00 0.00 3.61
4526 7709 1.202770 GCAGTCTGGTTGGTACTTGGT 60.203 52.381 1.14 0.00 0.00 3.67
4527 7710 2.038033 GCAGTCTGGTTGGTACTTGGTA 59.962 50.000 1.14 0.00 0.00 3.25
4528 7711 3.660865 CAGTCTGGTTGGTACTTGGTAC 58.339 50.000 0.00 0.00 38.19 3.34
4529 7712 3.323979 CAGTCTGGTTGGTACTTGGTACT 59.676 47.826 7.60 0.00 38.85 2.73
4536 7733 2.532843 TGGTACTTGGTACTGTCCTCC 58.467 52.381 7.60 0.00 38.85 4.30
4571 7768 2.545526 GCACGAATATGGTGGATGAGTG 59.454 50.000 8.70 0.00 35.94 3.51
4588 7785 3.118629 TGAGTGAGAGAGAGAGAGAGAGC 60.119 52.174 0.00 0.00 0.00 4.09
4589 7786 2.159043 AGTGAGAGAGAGAGAGAGAGCG 60.159 54.545 0.00 0.00 0.00 5.03
4591 7788 0.530650 AGAGAGAGAGAGAGAGCGCG 60.531 60.000 0.00 0.00 0.00 6.86
4592 7789 2.105960 GAGAGAGAGAGAGAGCGCGC 62.106 65.000 26.66 26.66 0.00 6.86
4593 7790 3.506312 GAGAGAGAGAGAGCGCGCG 62.506 68.421 28.44 28.44 0.00 6.86
4620 7817 2.657296 CGTTCCTCACGTGCGTGT 60.657 61.111 21.63 0.00 44.49 4.49
4636 7833 1.196581 CGTGTTTCATCATGTTCCGCA 59.803 47.619 0.00 0.00 0.00 5.69
4644 7841 3.055458 TCATCATGTTCCGCAAAGGTCTA 60.055 43.478 0.00 0.00 41.99 2.59
4645 7842 2.972625 TCATGTTCCGCAAAGGTCTAG 58.027 47.619 0.00 0.00 41.99 2.43
4649 7846 1.725164 GTTCCGCAAAGGTCTAGTTCG 59.275 52.381 0.00 0.00 41.99 3.95
4650 7847 1.250328 TCCGCAAAGGTCTAGTTCGA 58.750 50.000 0.00 0.00 41.99 3.71
4655 7852 3.508762 GCAAAGGTCTAGTTCGATTCGA 58.491 45.455 4.29 4.29 0.00 3.71
4666 7863 1.583967 CGATTCGAACTCGCTCGCT 60.584 57.895 0.00 0.00 38.73 4.93
4687 7884 0.389817 CTGATTCGGTGAGCGGAACA 60.390 55.000 3.57 0.00 36.89 3.18
4713 7910 2.027192 GGGAGTACCTGTTGATTCAGCA 60.027 50.000 3.08 3.08 35.85 4.41
4714 7911 3.265791 GGAGTACCTGTTGATTCAGCAG 58.734 50.000 20.11 20.11 41.29 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
381 387 2.856988 TCCCACTTCCACCCCCAC 60.857 66.667 0.00 0.00 0.00 4.61
431 459 0.179121 CTGTCCTGCGCGGTGTATTA 60.179 55.000 16.49 0.00 0.00 0.98
561 591 1.001706 CAACAGCCGCGCTATACTAGA 60.002 52.381 5.56 0.00 36.40 2.43
593 623 0.463204 GGGTAGGCTCCGTACCTTTC 59.537 60.000 12.26 0.00 40.05 2.62
594 624 0.252375 TGGGTAGGCTCCGTACCTTT 60.252 55.000 12.26 0.00 40.05 3.11
597 627 0.964700 GTATGGGTAGGCTCCGTACC 59.035 60.000 11.72 4.73 39.60 3.34
598 628 0.595095 CGTATGGGTAGGCTCCGTAC 59.405 60.000 12.46 12.46 41.18 3.67
599 629 0.538057 CCGTATGGGTAGGCTCCGTA 60.538 60.000 0.00 0.00 0.00 4.02
600 630 1.831286 CCGTATGGGTAGGCTCCGT 60.831 63.158 0.00 0.00 0.00 4.69
601 631 1.529948 TCCGTATGGGTAGGCTCCG 60.530 63.158 0.00 0.00 37.00 4.63
602 632 1.470165 GGTCCGTATGGGTAGGCTCC 61.470 65.000 0.00 0.00 37.00 4.70
603 633 0.757935 TGGTCCGTATGGGTAGGCTC 60.758 60.000 0.00 0.00 37.00 4.70
604 634 0.759436 CTGGTCCGTATGGGTAGGCT 60.759 60.000 0.00 0.00 37.00 4.58
605 635 1.746517 CTGGTCCGTATGGGTAGGC 59.253 63.158 0.00 0.00 37.00 3.93
606 636 1.046472 TGCTGGTCCGTATGGGTAGG 61.046 60.000 0.00 0.00 37.00 3.18
607 637 1.048601 ATGCTGGTCCGTATGGGTAG 58.951 55.000 0.00 0.00 37.00 3.18
608 638 1.502690 AATGCTGGTCCGTATGGGTA 58.497 50.000 0.00 0.00 37.00 3.69
609 639 1.416401 CTAATGCTGGTCCGTATGGGT 59.584 52.381 0.00 0.00 37.00 4.51
610 640 1.416401 ACTAATGCTGGTCCGTATGGG 59.584 52.381 0.00 0.00 35.24 4.00
611 641 2.158957 ACACTAATGCTGGTCCGTATGG 60.159 50.000 0.00 0.00 0.00 2.74
612 642 3.123804 GACACTAATGCTGGTCCGTATG 58.876 50.000 0.00 0.00 0.00 2.39
613 643 2.102588 GGACACTAATGCTGGTCCGTAT 59.897 50.000 0.00 0.00 40.29 3.06
614 644 1.479323 GGACACTAATGCTGGTCCGTA 59.521 52.381 0.00 0.00 40.29 4.02
615 645 0.249398 GGACACTAATGCTGGTCCGT 59.751 55.000 0.00 0.00 40.29 4.69
630 660 5.481105 CGGTTACATTTGGTAGTTAGGACA 58.519 41.667 0.00 0.00 32.49 4.02
641 671 1.164411 TCAGCTGCGGTTACATTTGG 58.836 50.000 9.47 0.00 0.00 3.28
675 2724 4.037089 GGTCTGGTAATTCGGTTGTTTTGT 59.963 41.667 0.00 0.00 0.00 2.83
678 2727 3.566742 GTGGTCTGGTAATTCGGTTGTTT 59.433 43.478 0.00 0.00 0.00 2.83
778 2848 4.643795 GCCACTCTGCCAGCATTA 57.356 55.556 0.00 0.00 0.00 1.90
820 2890 5.447624 AAACATTGGTAACTTTTCGAGGG 57.552 39.130 0.00 0.00 37.61 4.30
873 2948 0.468226 AGAAAAGGACACAGGTCGCA 59.532 50.000 0.00 0.00 45.28 5.10
892 2967 0.042131 ATAAGGACGGGGTGGACTCA 59.958 55.000 0.00 0.00 0.00 3.41
903 2978 0.748450 TGGCGGGAGTAATAAGGACG 59.252 55.000 0.00 0.00 0.00 4.79
904 2979 1.540580 GCTGGCGGGAGTAATAAGGAC 60.541 57.143 0.00 0.00 0.00 3.85
905 2980 0.756903 GCTGGCGGGAGTAATAAGGA 59.243 55.000 0.00 0.00 0.00 3.36
1034 3132 2.851102 CCATCGATCCCCTGCCCT 60.851 66.667 0.00 0.00 0.00 5.19
1035 3133 3.958860 CCCATCGATCCCCTGCCC 61.959 72.222 0.00 0.00 0.00 5.36
1038 3136 2.888447 GCTCCCCATCGATCCCCTG 61.888 68.421 0.00 0.00 0.00 4.45
1535 3653 4.481072 ACTACTACCAAGTGACCAGTTCT 58.519 43.478 0.00 0.00 36.36 3.01
1560 3954 4.022762 ACATCCTAGCTAATGTACTGCGAG 60.023 45.833 8.94 0.00 34.42 5.03
1599 3993 6.888632 AGAGTAATGAGATGCCATTTTCAAGT 59.111 34.615 0.00 0.00 37.81 3.16
1605 3999 6.101734 TCCCTAAGAGTAATGAGATGCCATTT 59.898 38.462 0.00 0.00 37.81 2.32
1606 4000 5.608437 TCCCTAAGAGTAATGAGATGCCATT 59.392 40.000 0.00 0.00 39.76 3.16
1715 4112 5.223382 CACTATATCCAGTGCTTAAGGTCG 58.777 45.833 4.29 0.00 39.54 4.79
1733 4130 3.947834 GGCAGCATTCTTTGTACCACTAT 59.052 43.478 0.00 0.00 0.00 2.12
1738 4135 1.135286 GCAGGCAGCATTCTTTGTACC 60.135 52.381 0.00 0.00 44.79 3.34
1739 4136 2.268730 GCAGGCAGCATTCTTTGTAC 57.731 50.000 0.00 0.00 44.79 2.90
1903 4372 5.757320 CACTTGATCTGAGAAAAGTCACAGT 59.243 40.000 10.02 3.21 41.65 3.55
1905 4374 5.674525 ACACTTGATCTGAGAAAAGTCACA 58.325 37.500 10.02 0.00 30.59 3.58
1993 4472 5.138125 TGCCTTTCCTTTTCATGAATGTC 57.862 39.130 9.40 0.00 0.00 3.06
2012 4494 2.165998 GGCTATGATGATTCCCTTGCC 58.834 52.381 0.00 0.00 0.00 4.52
2144 4634 5.541484 AGAGATTTTTGGGCATATGATTCCC 59.459 40.000 6.97 8.42 40.47 3.97
2317 4918 2.129823 AACGACGACGAACAGTGAAT 57.870 45.000 15.32 0.00 42.66 2.57
2318 4919 1.912001 AAACGACGACGAACAGTGAA 58.088 45.000 15.32 0.00 42.66 3.18
2322 4923 0.706729 GGCTAAACGACGACGAACAG 59.293 55.000 15.32 8.16 42.66 3.16
2324 4925 1.668253 CGGGCTAAACGACGACGAAC 61.668 60.000 15.32 0.00 42.66 3.95
2336 4937 0.254747 CCTCCCATTTCACGGGCTAA 59.745 55.000 0.00 0.00 44.11 3.09
2357 4958 1.067846 TGAATGTGAAGGGACGACGAG 60.068 52.381 0.00 0.00 0.00 4.18
2358 4959 0.963225 TGAATGTGAAGGGACGACGA 59.037 50.000 0.00 0.00 0.00 4.20
2359 4960 1.068474 GTGAATGTGAAGGGACGACG 58.932 55.000 0.00 0.00 0.00 5.12
2360 4961 2.069273 CTGTGAATGTGAAGGGACGAC 58.931 52.381 0.00 0.00 0.00 4.34
2372 4975 1.514087 GCATGGGGCACTGTGAATG 59.486 57.895 12.86 9.85 43.97 2.67
2410 5013 7.181845 ACCACATTCACCCAAACCAAATATTAT 59.818 33.333 0.00 0.00 0.00 1.28
2644 5430 2.487086 GGGATACAGGTGTGCATGCATA 60.487 50.000 25.64 19.63 39.74 3.14
2807 5668 4.142513 GGTGAAAGCCTCAAAGCTCTTATG 60.143 45.833 0.00 0.00 44.11 1.90
2851 5712 0.899019 TTATCACACACGGGCAGCTA 59.101 50.000 0.00 0.00 0.00 3.32
2902 5763 6.015940 AGCTTATTCCCTGACAAAAAGTTCAG 60.016 38.462 0.00 0.00 0.00 3.02
2953 5820 4.479158 ACTCTCTGAACTCTGAAGACCTT 58.521 43.478 0.00 0.00 0.00 3.50
2954 5821 4.112634 ACTCTCTGAACTCTGAAGACCT 57.887 45.455 0.00 0.00 0.00 3.85
2999 5866 8.792633 AGCTCTTGTGCAATAATACAGTAAAAA 58.207 29.630 0.00 0.00 34.99 1.94
3184 6052 4.758165 TGACTACATGAGTGAGTCGTACAA 59.242 41.667 0.00 0.00 42.10 2.41
3216 6087 4.922471 TTCTTTTTCGTGGGGGTTTAAG 57.078 40.909 0.00 0.00 0.00 1.85
3219 6090 3.707102 TCATTTCTTTTTCGTGGGGGTTT 59.293 39.130 0.00 0.00 0.00 3.27
3222 6093 2.625790 TGTCATTTCTTTTTCGTGGGGG 59.374 45.455 0.00 0.00 0.00 5.40
3263 6136 3.382546 GGCAGTTGAATTAGCATGGTGAT 59.617 43.478 7.89 1.18 0.00 3.06
3306 6213 5.816682 ACCTCTTTAACAAGGTGATTAGGG 58.183 41.667 7.08 0.00 44.26 3.53
3327 6234 2.565841 ACTTGTCAGCAACTCAAGACC 58.434 47.619 14.45 0.00 40.35 3.85
3330 6237 4.560035 CACAAAACTTGTCAGCAACTCAAG 59.440 41.667 0.00 0.00 43.23 3.02
3333 6240 3.119495 ACCACAAAACTTGTCAGCAACTC 60.119 43.478 0.00 0.00 43.23 3.01
3334 6241 2.825532 ACCACAAAACTTGTCAGCAACT 59.174 40.909 0.00 0.00 43.23 3.16
3339 6246 4.868450 TCGTAACCACAAAACTTGTCAG 57.132 40.909 0.00 0.00 43.23 3.51
3340 6247 5.624344 TTTCGTAACCACAAAACTTGTCA 57.376 34.783 0.00 0.00 43.23 3.58
3341 6248 6.259638 TCATTTCGTAACCACAAAACTTGTC 58.740 36.000 0.00 0.00 43.23 3.18
3342 6249 6.197364 TCATTTCGTAACCACAAAACTTGT 57.803 33.333 0.00 0.00 46.75 3.16
3343 6250 6.345723 GCATCATTTCGTAACCACAAAACTTG 60.346 38.462 0.00 0.00 0.00 3.16
3344 6251 5.689961 GCATCATTTCGTAACCACAAAACTT 59.310 36.000 0.00 0.00 0.00 2.66
3345 6252 5.219633 GCATCATTTCGTAACCACAAAACT 58.780 37.500 0.00 0.00 0.00 2.66
3346 6253 4.979197 TGCATCATTTCGTAACCACAAAAC 59.021 37.500 0.00 0.00 0.00 2.43
3348 6255 4.793071 CTGCATCATTTCGTAACCACAAA 58.207 39.130 0.00 0.00 0.00 2.83
3356 6266 3.242837 GCATGAAGCTGCATCATTTCGTA 60.243 43.478 16.86 0.00 41.87 3.43
3357 6267 2.479049 GCATGAAGCTGCATCATTTCGT 60.479 45.455 16.86 2.82 41.87 3.85
3359 6269 2.117137 CGCATGAAGCTGCATCATTTC 58.883 47.619 16.86 11.05 42.40 2.17
3521 6517 2.607635 GCTCTTGTTGTGAGTGAACGAA 59.392 45.455 0.00 0.00 34.30 3.85
3535 6531 0.252881 TCATCCAGGGAGGCTCTTGT 60.253 55.000 15.23 0.00 37.29 3.16
3608 6605 6.485313 CAGAAACAAACATACAAGGAGTACCA 59.515 38.462 0.00 0.00 38.94 3.25
3650 6651 0.101040 ACAAGCATGCACACACACAC 59.899 50.000 21.98 0.00 0.00 3.82
3652 6653 0.101040 ACACAAGCATGCACACACAC 59.899 50.000 21.98 0.00 0.00 3.82
3654 6655 1.210545 GCACACAAGCATGCACACAC 61.211 55.000 21.98 0.00 41.65 3.82
3656 6657 2.012414 CGCACACAAGCATGCACAC 61.012 57.895 21.98 0.64 42.17 3.82
3658 6659 2.012414 CACGCACACAAGCATGCAC 61.012 57.895 21.98 0.00 42.17 4.57
3661 6662 0.248580 AACACACGCACACAAGCATG 60.249 50.000 0.00 0.00 33.25 4.06
3662 6663 0.248580 CAACACACGCACACAAGCAT 60.249 50.000 0.00 0.00 0.00 3.79
3663 6664 1.136356 CAACACACGCACACAAGCA 59.864 52.632 0.00 0.00 0.00 3.91
3664 6665 0.861450 GACAACACACGCACACAAGC 60.861 55.000 0.00 0.00 0.00 4.01
3665 6666 0.445829 TGACAACACACGCACACAAG 59.554 50.000 0.00 0.00 0.00 3.16
3666 6667 1.090728 ATGACAACACACGCACACAA 58.909 45.000 0.00 0.00 0.00 3.33
3671 6672 1.333308 CAAGGAATGACAACACACGCA 59.667 47.619 0.00 0.00 0.00 5.24
3673 6687 1.946768 ACCAAGGAATGACAACACACG 59.053 47.619 0.00 0.00 0.00 4.49
3698 6712 6.488006 AGCATAGTGAGGGTTATTGCTAATTG 59.512 38.462 0.00 0.00 0.00 2.32
3747 6761 6.202379 CAGAGCACAGATATGTTACATGAAGG 59.798 42.308 8.26 0.00 0.00 3.46
3817 6837 8.169268 GCGTAATATTATCACAAATGGTAGAGC 58.831 37.037 0.00 0.00 0.00 4.09
3820 6840 8.227791 GTGGCGTAATATTATCACAAATGGTAG 58.772 37.037 15.50 0.00 0.00 3.18
3821 6841 7.095565 CGTGGCGTAATATTATCACAAATGGTA 60.096 37.037 18.16 0.00 0.00 3.25
3824 6844 6.573357 CACGTGGCGTAATATTATCACAAATG 59.427 38.462 7.95 12.53 38.32 2.32
3825 6845 6.259167 ACACGTGGCGTAATATTATCACAAAT 59.741 34.615 21.57 0.00 38.32 2.32
3826 6846 5.581479 ACACGTGGCGTAATATTATCACAAA 59.419 36.000 21.57 0.00 38.32 2.83
3828 6848 4.684877 ACACGTGGCGTAATATTATCACA 58.315 39.130 21.57 8.57 38.32 3.58
3829 6849 5.646467 AACACGTGGCGTAATATTATCAC 57.354 39.130 21.57 7.30 38.32 3.06
3830 6850 5.581479 ACAAACACGTGGCGTAATATTATCA 59.419 36.000 21.57 0.00 38.32 2.15
3831 6851 6.039781 ACAAACACGTGGCGTAATATTATC 57.960 37.500 21.57 0.00 38.32 1.75
3832 6852 6.425577 AACAAACACGTGGCGTAATATTAT 57.574 33.333 21.57 0.00 38.32 1.28
3833 6853 5.859521 AACAAACACGTGGCGTAATATTA 57.140 34.783 21.57 0.00 38.32 0.98
3834 6854 4.752661 AACAAACACGTGGCGTAATATT 57.247 36.364 21.57 0.00 38.32 1.28
3835 6855 4.023878 ACAAACAAACACGTGGCGTAATAT 60.024 37.500 21.57 0.00 38.32 1.28
3836 6856 3.311871 ACAAACAAACACGTGGCGTAATA 59.688 39.130 21.57 0.00 38.32 0.98
3837 6857 2.097791 ACAAACAAACACGTGGCGTAAT 59.902 40.909 21.57 3.91 38.32 1.89
3839 6859 1.085091 ACAAACAAACACGTGGCGTA 58.915 45.000 21.57 0.00 38.32 4.42
3840 6860 1.085091 TACAAACAAACACGTGGCGT 58.915 45.000 21.57 10.68 42.36 5.68
3841 6861 2.392933 ATACAAACAAACACGTGGCG 57.607 45.000 21.57 9.99 0.00 5.69
3842 6862 4.106197 TCAAATACAAACAAACACGTGGC 58.894 39.130 21.57 0.00 0.00 5.01
3847 6867 8.751335 CATGGTACTTCAAATACAAACAAACAC 58.249 33.333 0.00 0.00 0.00 3.32
3853 6873 8.296713 ACATCACATGGTACTTCAAATACAAAC 58.703 33.333 0.00 0.00 33.60 2.93
3869 6894 0.458370 TCGTCGAGCACATCACATGG 60.458 55.000 0.00 0.00 33.60 3.66
3873 6898 0.666274 TTGGTCGTCGAGCACATCAC 60.666 55.000 25.58 0.00 39.84 3.06
3877 6902 1.299850 CAGTTGGTCGTCGAGCACA 60.300 57.895 25.58 14.37 39.84 4.57
3888 6913 1.524863 CGACCGAGGAGACAGTTGGT 61.525 60.000 0.00 0.00 0.00 3.67
3890 6915 1.213013 CCGACCGAGGAGACAGTTG 59.787 63.158 0.00 0.00 0.00 3.16
3910 6935 2.573341 TAAGGACGAACGAGCGAGCG 62.573 60.000 8.50 2.38 34.83 5.03
3911 6936 0.455633 TTAAGGACGAACGAGCGAGC 60.456 55.000 8.50 0.00 34.83 5.03
3920 6945 7.762615 AGAACGATCATGTTAATTAAGGACGAA 59.237 33.333 0.00 0.00 30.75 3.85
3921 6946 7.262772 AGAACGATCATGTTAATTAAGGACGA 58.737 34.615 0.00 0.00 30.75 4.20
3930 6955 9.601217 AGCTTAACTAAGAACGATCATGTTAAT 57.399 29.630 13.60 3.77 35.33 1.40
3939 6967 4.710375 TCCTGGAGCTTAACTAAGAACGAT 59.290 41.667 0.00 0.00 35.33 3.73
3940 6968 4.084287 TCCTGGAGCTTAACTAAGAACGA 58.916 43.478 0.00 0.00 35.33 3.85
3941 6969 4.451629 TCCTGGAGCTTAACTAAGAACG 57.548 45.455 0.00 0.00 35.33 3.95
3942 6970 5.978814 TCATCCTGGAGCTTAACTAAGAAC 58.021 41.667 1.52 0.00 35.33 3.01
3943 6971 6.013725 TGTTCATCCTGGAGCTTAACTAAGAA 60.014 38.462 1.52 0.00 35.33 2.52
3945 6973 5.582665 GTGTTCATCCTGGAGCTTAACTAAG 59.417 44.000 1.52 0.00 36.40 2.18
3946 6974 5.012664 TGTGTTCATCCTGGAGCTTAACTAA 59.987 40.000 1.52 0.00 0.00 2.24
3947 6975 4.530553 TGTGTTCATCCTGGAGCTTAACTA 59.469 41.667 1.52 0.00 0.00 2.24
3948 6976 3.327757 TGTGTTCATCCTGGAGCTTAACT 59.672 43.478 1.52 0.00 0.00 2.24
3949 6977 3.437049 GTGTGTTCATCCTGGAGCTTAAC 59.563 47.826 1.52 4.65 0.00 2.01
3950 6978 3.559171 GGTGTGTTCATCCTGGAGCTTAA 60.559 47.826 1.52 0.00 0.00 1.85
3951 6979 2.027192 GGTGTGTTCATCCTGGAGCTTA 60.027 50.000 1.52 0.00 0.00 3.09
3954 7018 0.326264 AGGTGTGTTCATCCTGGAGC 59.674 55.000 1.52 0.00 0.00 4.70
3957 7021 0.250858 TGCAGGTGTGTTCATCCTGG 60.251 55.000 19.58 0.00 46.03 4.45
3967 7031 1.667236 TTCTGTGTCTTGCAGGTGTG 58.333 50.000 0.00 0.00 34.89 3.82
3970 7034 1.133976 AGCTTTCTGTGTCTTGCAGGT 60.134 47.619 0.00 0.00 34.89 4.00
3980 7044 6.324819 TCTTTGTTTTCTCAAGCTTTCTGTG 58.675 36.000 0.00 0.00 0.00 3.66
3981 7045 6.375455 TCTCTTTGTTTTCTCAAGCTTTCTGT 59.625 34.615 0.00 0.00 0.00 3.41
3982 7046 6.789262 TCTCTTTGTTTTCTCAAGCTTTCTG 58.211 36.000 0.00 0.00 0.00 3.02
3983 7047 6.825721 TCTCTCTTTGTTTTCTCAAGCTTTCT 59.174 34.615 0.00 0.00 0.00 2.52
3985 7049 6.375455 TGTCTCTCTTTGTTTTCTCAAGCTTT 59.625 34.615 0.00 0.00 0.00 3.51
3992 7074 6.963805 CAGTGTTTGTCTCTCTTTGTTTTCTC 59.036 38.462 0.00 0.00 0.00 2.87
3995 7077 6.817765 TCAGTGTTTGTCTCTCTTTGTTTT 57.182 33.333 0.00 0.00 0.00 2.43
3997 7079 5.940470 ACTTCAGTGTTTGTCTCTCTTTGTT 59.060 36.000 0.00 0.00 0.00 2.83
3999 7081 7.571026 CATACTTCAGTGTTTGTCTCTCTTTG 58.429 38.462 0.00 0.00 0.00 2.77
4001 7083 5.698545 GCATACTTCAGTGTTTGTCTCTCTT 59.301 40.000 0.00 0.00 0.00 2.85
4003 7085 4.991056 TGCATACTTCAGTGTTTGTCTCTC 59.009 41.667 0.00 0.00 0.00 3.20
4005 7087 5.409520 TGATGCATACTTCAGTGTTTGTCTC 59.590 40.000 0.00 0.00 0.00 3.36
4007 7089 5.611796 TGATGCATACTTCAGTGTTTGTC 57.388 39.130 0.00 0.00 0.00 3.18
4016 7098 5.819379 GGAATCTGAACTGATGCATACTTCA 59.181 40.000 0.00 6.11 0.00 3.02
4017 7099 6.054295 AGGAATCTGAACTGATGCATACTTC 58.946 40.000 0.00 1.28 0.00 3.01
4019 7101 5.627182 AGGAATCTGAACTGATGCATACT 57.373 39.130 0.00 0.00 0.00 2.12
4020 7102 5.403766 CGTAGGAATCTGAACTGATGCATAC 59.596 44.000 0.00 11.67 36.46 2.39
4021 7103 5.532557 CGTAGGAATCTGAACTGATGCATA 58.467 41.667 0.00 0.00 0.00 3.14
4023 7105 3.785486 CGTAGGAATCTGAACTGATGCA 58.215 45.455 0.00 0.00 0.00 3.96
4024 7106 2.541762 GCGTAGGAATCTGAACTGATGC 59.458 50.000 0.00 0.00 0.00 3.91
4025 7107 3.553511 GTGCGTAGGAATCTGAACTGATG 59.446 47.826 0.00 0.00 0.00 3.07
4026 7108 3.735208 CGTGCGTAGGAATCTGAACTGAT 60.735 47.826 0.00 0.00 0.00 2.90
4027 7109 2.415491 CGTGCGTAGGAATCTGAACTGA 60.415 50.000 0.00 0.00 0.00 3.41
4028 7110 1.920574 CGTGCGTAGGAATCTGAACTG 59.079 52.381 0.00 0.00 0.00 3.16
4029 7111 1.736032 GCGTGCGTAGGAATCTGAACT 60.736 52.381 0.00 0.00 0.00 3.01
4051 7208 2.811410 ACTGGTAGTCGGTAACCATCA 58.189 47.619 4.49 0.00 44.56 3.07
4052 7209 3.242870 CGTACTGGTAGTCGGTAACCATC 60.243 52.174 4.49 0.12 44.56 3.51
4054 7211 2.083774 CGTACTGGTAGTCGGTAACCA 58.916 52.381 4.08 4.08 43.47 3.67
4074 7231 2.033602 CCTTGAACGGGGGACACC 59.966 66.667 0.00 0.00 39.11 4.16
4075 7232 1.302271 GTCCTTGAACGGGGGACAC 60.302 63.158 6.49 0.00 46.14 3.67
4076 7233 3.153825 GTCCTTGAACGGGGGACA 58.846 61.111 6.49 0.00 46.14 4.02
4088 7245 1.612739 GGACTTCCTCGGGGTCCTT 60.613 63.158 0.00 0.00 44.21 3.36
4092 7249 1.757340 GATCGGACTTCCTCGGGGT 60.757 63.158 0.00 0.00 0.00 4.95
4097 7254 3.757623 CGATCGATCGGACTTCCTC 57.242 57.895 34.54 2.55 45.93 3.71
4117 7274 1.079405 TCTGATTCCCGTTCGTGGC 60.079 57.895 0.00 0.00 0.00 5.01
4119 7276 1.068474 GTGTCTGATTCCCGTTCGTG 58.932 55.000 0.00 0.00 0.00 4.35
4133 7297 1.005630 GAGCTGTCGCCTTGTGTCT 60.006 57.895 0.00 0.00 36.60 3.41
4267 7437 4.803613 TGTTACACGTCATCATGATAGCAC 59.196 41.667 8.15 4.84 0.00 4.40
4268 7438 4.803613 GTGTTACACGTCATCATGATAGCA 59.196 41.667 8.15 0.00 0.00 3.49
4269 7439 5.043903 AGTGTTACACGTCATCATGATAGC 58.956 41.667 8.15 3.34 39.64 2.97
4270 7440 6.020360 CACAGTGTTACACGTCATCATGATAG 60.020 42.308 8.15 5.72 39.64 2.08
4271 7441 5.804979 CACAGTGTTACACGTCATCATGATA 59.195 40.000 8.15 0.00 39.64 2.15
4272 7442 4.627035 CACAGTGTTACACGTCATCATGAT 59.373 41.667 10.00 1.18 39.64 2.45
4273 7443 3.987220 CACAGTGTTACACGTCATCATGA 59.013 43.478 10.00 0.00 39.64 3.07
4277 7448 2.404215 AGCACAGTGTTACACGTCATC 58.596 47.619 10.00 0.44 39.64 2.92
4339 7514 4.698583 GAGTTATGACTCGTGTGGTAGT 57.301 45.455 1.38 0.00 42.60 2.73
4449 7632 0.475906 AGGTTGTTGAGCTTGAGCCT 59.524 50.000 0.00 0.00 43.38 4.58
4508 7691 3.323979 CAGTACCAAGTACCAACCAGACT 59.676 47.826 1.36 0.00 39.58 3.24
4523 7706 4.332683 ACAGAATAGGAGGACAGTACCA 57.667 45.455 0.00 0.00 0.00 3.25
4524 7707 5.662456 GAAACAGAATAGGAGGACAGTACC 58.338 45.833 0.00 0.00 0.00 3.34
4525 7708 5.125097 TCGAAACAGAATAGGAGGACAGTAC 59.875 44.000 0.00 0.00 0.00 2.73
4526 7709 5.258841 TCGAAACAGAATAGGAGGACAGTA 58.741 41.667 0.00 0.00 0.00 2.74
4527 7710 4.087182 TCGAAACAGAATAGGAGGACAGT 58.913 43.478 0.00 0.00 0.00 3.55
4528 7711 4.677584 CTCGAAACAGAATAGGAGGACAG 58.322 47.826 0.00 0.00 0.00 3.51
4529 7712 3.119101 GCTCGAAACAGAATAGGAGGACA 60.119 47.826 0.00 0.00 0.00 4.02
4571 7768 1.221414 GCGCTCTCTCTCTCTCTCTC 58.779 60.000 0.00 0.00 0.00 3.20
4620 7817 2.890311 ACCTTTGCGGAACATGATGAAA 59.110 40.909 0.00 0.00 36.31 2.69
4649 7846 1.913685 CAGCGAGCGAGTTCGAATC 59.086 57.895 13.23 0.00 43.03 2.52
4650 7847 2.161486 GCAGCGAGCGAGTTCGAAT 61.161 57.895 13.23 0.00 43.03 3.34
4666 7863 2.125552 CCGCTCACCGAATCAGCA 60.126 61.111 0.00 0.00 40.02 4.41
4687 7884 2.122056 AACAGGTACTCCCCGGCT 59.878 61.111 0.00 0.00 34.60 5.52
4692 7889 2.027192 TGCTGAATCAACAGGTACTCCC 60.027 50.000 0.00 0.00 34.60 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.