Multiple sequence alignment - TraesCS1B01G275700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G275700 chr1B 100.000 5079 0 0 1 5079 483366067 483371145 0.000000e+00 9380.0
1 TraesCS1B01G275700 chr1B 100.000 2399 0 0 5392 7790 483371458 483373856 0.000000e+00 4431.0
2 TraesCS1B01G275700 chr1D 94.052 2606 124 8 2487 5069 361111221 361113818 0.000000e+00 3925.0
3 TraesCS1B01G275700 chr1D 91.513 2439 121 34 5392 7790 361114168 361116560 0.000000e+00 3278.0
4 TraesCS1B01G275700 chr1D 91.322 1936 75 36 504 2378 361109310 361111213 0.000000e+00 2558.0
5 TraesCS1B01G275700 chr1D 87.594 266 31 2 1 264 290426613 290426878 2.730000e-79 307.0
6 TraesCS1B01G275700 chr1D 86.447 273 33 4 1 271 32780548 32780278 5.910000e-76 296.0
7 TraesCS1B01G275700 chr1A 95.114 2333 107 4 2740 5069 460671854 460674182 0.000000e+00 3670.0
8 TraesCS1B01G275700 chr1A 91.511 1708 73 26 5392 7078 460674532 460676188 0.000000e+00 2285.0
9 TraesCS1B01G275700 chr1A 91.679 1322 86 17 1432 2742 460670512 460671820 0.000000e+00 1810.0
10 TraesCS1B01G275700 chr1A 90.360 695 34 14 7078 7772 460676374 460677035 0.000000e+00 881.0
11 TraesCS1B01G275700 chr1A 88.099 689 38 21 497 1176 460669548 460670201 0.000000e+00 778.0
12 TraesCS1B01G275700 chr1A 94.595 37 2 0 1388 1424 460670411 460670447 3.040000e-04 58.4
13 TraesCS1B01G275700 chr3D 92.237 219 17 0 7228 7446 245534005 245533787 2.110000e-80 311.0
14 TraesCS1B01G275700 chr5A 87.594 266 31 2 1 264 422947594 422947859 2.730000e-79 307.0
15 TraesCS1B01G275700 chr2A 87.004 277 30 5 1 275 214477959 214478231 2.730000e-79 307.0
16 TraesCS1B01G275700 chr4A 86.957 276 29 5 1 273 468542191 468542462 3.530000e-78 303.0
17 TraesCS1B01G275700 chr2D 86.219 283 31 7 3 280 367924799 367924520 4.570000e-77 300.0
18 TraesCS1B01G275700 chr2D 85.614 285 35 5 3 284 603251018 603250737 2.130000e-75 294.0
19 TraesCS1B01G275700 chr7D 86.331 278 32 5 1 275 271712654 271712380 1.640000e-76 298.0
20 TraesCS1B01G275700 chr5B 86.765 272 30 5 3 271 42151528 42151796 1.640000e-76 298.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G275700 chr1B 483366067 483373856 7789 False 6905.500000 9380 100.000000 1 7790 2 chr1B.!!$F1 7789
1 TraesCS1B01G275700 chr1D 361109310 361116560 7250 False 3253.666667 3925 92.295667 504 7790 3 chr1D.!!$F2 7286
2 TraesCS1B01G275700 chr1A 460669548 460677035 7487 False 1580.400000 3670 91.893000 497 7772 6 chr1A.!!$F1 7275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
309 310 0.029567 GTCGTCAGTCGGGCATCTAG 59.970 60.000 0.00 0.00 40.32 2.43 F
311 312 0.029567 CGTCAGTCGGGCATCTAGTC 59.970 60.000 0.00 0.00 35.71 2.59 F
419 420 0.034337 GCCCGACTGTTAGTTGTCCA 59.966 55.000 0.00 0.00 0.00 4.02 F
489 490 0.176449 GGTATGCCCGTCCGTTTAGT 59.824 55.000 0.00 0.00 0.00 2.24 F
1112 1140 0.320421 TTCTCCCCGTTTCTTGCTCG 60.320 55.000 0.00 0.00 0.00 5.03 F
1730 1868 0.522180 CCTCTCGTGTACGTGCTTCT 59.478 55.000 4.97 0.00 40.80 2.85 F
2564 2705 0.033796 ACCTTATGCCAGCATGCAGT 60.034 50.000 21.98 6.43 45.93 4.40 F
3634 3812 0.038166 TCTAAAACTGCAGGCCAGGG 59.962 55.000 19.93 3.69 46.14 4.45 F
4228 4408 0.164647 GTCACGAACAGCAGATGCAC 59.835 55.000 7.68 0.00 45.16 4.57 F
4833 5013 1.003233 GTCCAGGGACAGTTGGAGC 60.003 63.158 13.49 0.00 43.80 4.70 F
6273 6493 0.837940 GGGGTAAGGTCCTCATCCAC 59.162 60.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1371 1437 0.179015 TTTTTGGCACGGCTCCTACA 60.179 50.000 0.00 0.00 0.00 2.74 R
1885 2023 0.321564 CCAGCGACACCCATTTCTCA 60.322 55.000 0.00 0.00 0.00 3.27 R
2413 2551 5.671493 TGAAGGCTTAAGCAGAGTTATACC 58.329 41.667 27.83 7.30 44.36 2.73 R
2498 2636 8.924511 ATGAACCATTATATCCAGTTAGGTTG 57.075 34.615 0.00 0.00 38.16 3.77 R
2544 2682 0.666913 CTGCATGCTGGCATAAGGTC 59.333 55.000 20.33 0.00 43.97 3.85 R
2925 3102 1.009829 CTCGCCGCTTCTGCTTTAAT 58.990 50.000 0.00 0.00 36.97 1.40 R
4105 4285 0.108585 TTGGAGCTTTCCGAAGTGCT 59.891 50.000 9.54 9.54 38.59 4.40 R
4773 4953 0.613777 GGGATCCCACAGAAGACGTT 59.386 55.000 26.95 0.00 35.81 3.99 R
5479 5691 1.147473 GGCAACCTTTCGGCAAAATG 58.853 50.000 0.00 0.00 0.00 2.32 R
6453 6692 0.706729 CGCGTCGGTGTACTTTCTTC 59.293 55.000 0.00 0.00 0.00 2.87 R
7673 8105 0.175302 CACATCTCTGCTTCTCGGCT 59.825 55.000 0.00 0.00 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.197306 ACTATTCATACTACACTTGTATCACCA 57.803 33.333 0.00 0.00 0.00 4.17
34 35 7.898014 TCATACTACACTTGTATCACCATCT 57.102 36.000 0.00 0.00 0.00 2.90
35 36 7.941919 TCATACTACACTTGTATCACCATCTC 58.058 38.462 0.00 0.00 0.00 2.75
36 37 7.780271 TCATACTACACTTGTATCACCATCTCT 59.220 37.037 0.00 0.00 0.00 3.10
37 38 6.859112 ACTACACTTGTATCACCATCTCTT 57.141 37.500 0.00 0.00 0.00 2.85
38 39 6.868622 ACTACACTTGTATCACCATCTCTTC 58.131 40.000 0.00 0.00 0.00 2.87
39 40 4.748892 ACACTTGTATCACCATCTCTTCG 58.251 43.478 0.00 0.00 0.00 3.79
40 41 3.553511 CACTTGTATCACCATCTCTTCGC 59.446 47.826 0.00 0.00 0.00 4.70
41 42 3.449018 ACTTGTATCACCATCTCTTCGCT 59.551 43.478 0.00 0.00 0.00 4.93
42 43 3.443099 TGTATCACCATCTCTTCGCTG 57.557 47.619 0.00 0.00 0.00 5.18
43 44 3.023832 TGTATCACCATCTCTTCGCTGA 58.976 45.455 0.00 0.00 0.00 4.26
44 45 3.447229 TGTATCACCATCTCTTCGCTGAA 59.553 43.478 0.00 0.00 0.00 3.02
45 46 2.370281 TCACCATCTCTTCGCTGAAC 57.630 50.000 0.00 0.00 0.00 3.18
46 47 1.895798 TCACCATCTCTTCGCTGAACT 59.104 47.619 0.00 0.00 0.00 3.01
47 48 3.089284 TCACCATCTCTTCGCTGAACTA 58.911 45.455 0.00 0.00 0.00 2.24
48 49 3.129462 TCACCATCTCTTCGCTGAACTAG 59.871 47.826 0.00 0.00 0.00 2.57
49 50 3.093057 ACCATCTCTTCGCTGAACTAGT 58.907 45.455 0.00 0.00 0.00 2.57
50 51 3.119316 ACCATCTCTTCGCTGAACTAGTG 60.119 47.826 0.00 0.00 38.28 2.74
51 52 2.638556 TCTCTTCGCTGAACTAGTGC 57.361 50.000 0.00 0.00 36.84 4.40
52 53 1.886542 TCTCTTCGCTGAACTAGTGCA 59.113 47.619 2.81 2.81 36.84 4.57
53 54 1.989165 CTCTTCGCTGAACTAGTGCAC 59.011 52.381 9.40 9.40 36.84 4.57
54 55 1.071605 CTTCGCTGAACTAGTGCACC 58.928 55.000 14.63 0.00 36.84 5.01
55 56 0.679505 TTCGCTGAACTAGTGCACCT 59.320 50.000 14.63 3.48 36.84 4.00
56 57 1.541379 TCGCTGAACTAGTGCACCTA 58.459 50.000 14.63 4.57 36.84 3.08
57 58 2.100197 TCGCTGAACTAGTGCACCTAT 58.900 47.619 14.63 0.00 36.84 2.57
58 59 3.284617 TCGCTGAACTAGTGCACCTATA 58.715 45.455 14.63 0.00 36.84 1.31
59 60 3.889538 TCGCTGAACTAGTGCACCTATAT 59.110 43.478 14.63 0.00 36.84 0.86
60 61 5.067954 TCGCTGAACTAGTGCACCTATATA 58.932 41.667 14.63 0.00 36.84 0.86
61 62 5.181433 TCGCTGAACTAGTGCACCTATATAG 59.819 44.000 14.63 10.76 36.84 1.31
62 63 5.048643 CGCTGAACTAGTGCACCTATATAGT 60.049 44.000 14.63 11.45 0.00 2.12
63 64 6.515200 CGCTGAACTAGTGCACCTATATAGTT 60.515 42.308 21.69 21.69 38.91 2.24
64 65 7.210873 GCTGAACTAGTGCACCTATATAGTTT 58.789 38.462 22.16 11.31 36.94 2.66
65 66 7.169982 GCTGAACTAGTGCACCTATATAGTTTG 59.830 40.741 22.16 18.96 36.94 2.93
66 67 8.074613 TGAACTAGTGCACCTATATAGTTTGT 57.925 34.615 22.16 7.45 36.94 2.83
67 68 8.195436 TGAACTAGTGCACCTATATAGTTTGTC 58.805 37.037 22.16 14.16 36.94 3.18
68 69 6.736123 ACTAGTGCACCTATATAGTTTGTCG 58.264 40.000 14.63 0.00 0.00 4.35
69 70 5.593679 AGTGCACCTATATAGTTTGTCGT 57.406 39.130 14.63 0.00 0.00 4.34
70 71 5.974108 AGTGCACCTATATAGTTTGTCGTT 58.026 37.500 14.63 0.00 0.00 3.85
71 72 5.810587 AGTGCACCTATATAGTTTGTCGTTG 59.189 40.000 14.63 0.00 0.00 4.10
72 73 5.579511 GTGCACCTATATAGTTTGTCGTTGT 59.420 40.000 5.22 0.00 0.00 3.32
73 74 6.091713 GTGCACCTATATAGTTTGTCGTTGTT 59.908 38.462 5.22 0.00 0.00 2.83
74 75 6.651643 TGCACCTATATAGTTTGTCGTTGTTT 59.348 34.615 8.92 0.00 0.00 2.83
75 76 7.173562 TGCACCTATATAGTTTGTCGTTGTTTT 59.826 33.333 8.92 0.00 0.00 2.43
76 77 7.480542 GCACCTATATAGTTTGTCGTTGTTTTG 59.519 37.037 8.92 0.00 0.00 2.44
77 78 7.960738 CACCTATATAGTTTGTCGTTGTTTTGG 59.039 37.037 8.92 0.00 0.00 3.28
78 79 7.879160 ACCTATATAGTTTGTCGTTGTTTTGGA 59.121 33.333 8.92 0.00 0.00 3.53
79 80 8.889717 CCTATATAGTTTGTCGTTGTTTTGGAT 58.110 33.333 8.92 0.00 0.00 3.41
80 81 9.702726 CTATATAGTTTGTCGTTGTTTTGGATG 57.297 33.333 1.21 0.00 0.00 3.51
81 82 4.712122 AGTTTGTCGTTGTTTTGGATGT 57.288 36.364 0.00 0.00 0.00 3.06
82 83 4.420168 AGTTTGTCGTTGTTTTGGATGTG 58.580 39.130 0.00 0.00 0.00 3.21
83 84 4.082463 AGTTTGTCGTTGTTTTGGATGTGT 60.082 37.500 0.00 0.00 0.00 3.72
84 85 4.442375 TTGTCGTTGTTTTGGATGTGTT 57.558 36.364 0.00 0.00 0.00 3.32
85 86 4.442375 TGTCGTTGTTTTGGATGTGTTT 57.558 36.364 0.00 0.00 0.00 2.83
86 87 4.169508 TGTCGTTGTTTTGGATGTGTTTG 58.830 39.130 0.00 0.00 0.00 2.93
87 88 3.549873 GTCGTTGTTTTGGATGTGTTTGG 59.450 43.478 0.00 0.00 0.00 3.28
88 89 2.863137 CGTTGTTTTGGATGTGTTTGGG 59.137 45.455 0.00 0.00 0.00 4.12
89 90 3.429547 CGTTGTTTTGGATGTGTTTGGGA 60.430 43.478 0.00 0.00 0.00 4.37
90 91 3.810310 TGTTTTGGATGTGTTTGGGAC 57.190 42.857 0.00 0.00 0.00 4.46
91 92 3.099905 TGTTTTGGATGTGTTTGGGACA 58.900 40.909 0.00 0.00 35.42 4.02
92 93 3.708631 TGTTTTGGATGTGTTTGGGACAT 59.291 39.130 0.00 0.00 41.10 3.06
93 94 4.895889 TGTTTTGGATGTGTTTGGGACATA 59.104 37.500 0.00 0.00 41.10 2.29
94 95 5.363868 TGTTTTGGATGTGTTTGGGACATAA 59.636 36.000 0.00 0.00 41.10 1.90
95 96 5.720371 TTTGGATGTGTTTGGGACATAAG 57.280 39.130 0.00 0.00 41.10 1.73
96 97 4.649267 TGGATGTGTTTGGGACATAAGA 57.351 40.909 0.00 0.00 41.10 2.10
97 98 4.991776 TGGATGTGTTTGGGACATAAGAA 58.008 39.130 0.00 0.00 41.10 2.52
98 99 5.389520 TGGATGTGTTTGGGACATAAGAAA 58.610 37.500 0.00 0.00 41.10 2.52
99 100 6.015918 TGGATGTGTTTGGGACATAAGAAAT 58.984 36.000 0.00 0.00 41.10 2.17
100 101 6.496565 TGGATGTGTTTGGGACATAAGAAATT 59.503 34.615 0.00 0.00 41.10 1.82
101 102 7.016072 TGGATGTGTTTGGGACATAAGAAATTT 59.984 33.333 0.00 0.00 41.10 1.82
102 103 7.545615 GGATGTGTTTGGGACATAAGAAATTTC 59.454 37.037 10.33 10.33 41.10 2.17
103 104 7.595819 TGTGTTTGGGACATAAGAAATTTCT 57.404 32.000 15.11 15.11 41.10 2.52
104 105 8.017418 TGTGTTTGGGACATAAGAAATTTCTT 57.983 30.769 30.61 30.61 40.92 2.52
105 106 7.925483 TGTGTTTGGGACATAAGAAATTTCTTG 59.075 33.333 33.75 24.63 42.11 3.02
106 107 6.928492 TGTTTGGGACATAAGAAATTTCTTGC 59.072 34.615 33.75 22.19 41.90 4.01
107 108 6.662865 TTGGGACATAAGAAATTTCTTGCA 57.337 33.333 33.75 20.77 46.34 4.08
108 109 6.855763 TGGGACATAAGAAATTTCTTGCAT 57.144 33.333 33.75 21.86 46.34 3.96
109 110 7.243604 TGGGACATAAGAAATTTCTTGCATT 57.756 32.000 33.75 19.64 46.34 3.56
110 111 7.678837 TGGGACATAAGAAATTTCTTGCATTT 58.321 30.769 33.75 18.70 46.34 2.32
111 112 7.603404 TGGGACATAAGAAATTTCTTGCATTTG 59.397 33.333 33.75 24.71 46.34 2.32
112 113 7.064966 GGGACATAAGAAATTTCTTGCATTTGG 59.935 37.037 33.75 19.95 46.34 3.28
113 114 7.603784 GGACATAAGAAATTTCTTGCATTTGGT 59.396 33.333 33.75 22.16 46.34 3.67
114 115 8.907222 ACATAAGAAATTTCTTGCATTTGGTT 57.093 26.923 33.75 13.53 46.34 3.67
115 116 8.776470 ACATAAGAAATTTCTTGCATTTGGTTG 58.224 29.630 33.75 20.49 46.34 3.77
116 117 5.678132 AGAAATTTCTTGCATTTGGTTGC 57.322 34.783 15.11 0.00 43.07 4.17
124 125 2.514205 GCATTTGGTTGCAGAGTTGT 57.486 45.000 0.00 0.00 42.31 3.32
125 126 2.825205 GCATTTGGTTGCAGAGTTGTT 58.175 42.857 0.00 0.00 42.31 2.83
126 127 3.197265 GCATTTGGTTGCAGAGTTGTTT 58.803 40.909 0.00 0.00 42.31 2.83
127 128 3.001533 GCATTTGGTTGCAGAGTTGTTTG 59.998 43.478 0.00 0.00 42.31 2.93
128 129 4.431809 CATTTGGTTGCAGAGTTGTTTGA 58.568 39.130 0.00 0.00 0.00 2.69
129 130 3.781079 TTGGTTGCAGAGTTGTTTGAG 57.219 42.857 0.00 0.00 0.00 3.02
130 131 2.997980 TGGTTGCAGAGTTGTTTGAGA 58.002 42.857 0.00 0.00 0.00 3.27
131 132 2.945008 TGGTTGCAGAGTTGTTTGAGAG 59.055 45.455 0.00 0.00 0.00 3.20
132 133 3.206150 GGTTGCAGAGTTGTTTGAGAGA 58.794 45.455 0.00 0.00 0.00 3.10
133 134 3.249559 GGTTGCAGAGTTGTTTGAGAGAG 59.750 47.826 0.00 0.00 0.00 3.20
134 135 4.122776 GTTGCAGAGTTGTTTGAGAGAGA 58.877 43.478 0.00 0.00 0.00 3.10
135 136 3.722147 TGCAGAGTTGTTTGAGAGAGAC 58.278 45.455 0.00 0.00 0.00 3.36
136 137 3.063485 GCAGAGTTGTTTGAGAGAGACC 58.937 50.000 0.00 0.00 0.00 3.85
137 138 3.493350 GCAGAGTTGTTTGAGAGAGACCA 60.493 47.826 0.00 0.00 0.00 4.02
138 139 4.802248 GCAGAGTTGTTTGAGAGAGACCAT 60.802 45.833 0.00 0.00 0.00 3.55
139 140 4.928615 CAGAGTTGTTTGAGAGAGACCATC 59.071 45.833 0.00 0.00 0.00 3.51
140 141 4.837860 AGAGTTGTTTGAGAGAGACCATCT 59.162 41.667 0.00 0.00 42.61 2.90
141 142 5.306678 AGAGTTGTTTGAGAGAGACCATCTT 59.693 40.000 0.00 0.00 38.84 2.40
142 143 5.546526 AGTTGTTTGAGAGAGACCATCTTC 58.453 41.667 0.00 0.00 38.84 2.87
143 144 5.070981 AGTTGTTTGAGAGAGACCATCTTCA 59.929 40.000 0.00 0.00 38.84 3.02
144 145 5.752036 TGTTTGAGAGAGACCATCTTCAT 57.248 39.130 0.00 0.00 38.84 2.57
145 146 5.728471 TGTTTGAGAGAGACCATCTTCATC 58.272 41.667 0.00 0.00 38.84 2.92
146 147 5.115480 GTTTGAGAGAGACCATCTTCATCC 58.885 45.833 0.00 0.00 38.84 3.51
147 148 4.262891 TGAGAGAGACCATCTTCATCCT 57.737 45.455 0.00 0.00 38.84 3.24
148 149 5.394562 TGAGAGAGACCATCTTCATCCTA 57.605 43.478 0.00 0.00 38.84 2.94
149 150 5.136828 TGAGAGAGACCATCTTCATCCTAC 58.863 45.833 0.00 0.00 38.84 3.18
150 151 5.136068 AGAGAGACCATCTTCATCCTACA 57.864 43.478 0.00 0.00 38.84 2.74
151 152 5.523588 AGAGAGACCATCTTCATCCTACAA 58.476 41.667 0.00 0.00 38.84 2.41
152 153 5.362430 AGAGAGACCATCTTCATCCTACAAC 59.638 44.000 0.00 0.00 38.84 3.32
153 154 5.276440 AGAGACCATCTTCATCCTACAACT 58.724 41.667 0.00 0.00 32.99 3.16
154 155 5.362430 AGAGACCATCTTCATCCTACAACTC 59.638 44.000 0.00 0.00 32.99 3.01
155 156 5.276440 AGACCATCTTCATCCTACAACTCT 58.724 41.667 0.00 0.00 0.00 3.24
156 157 5.362430 AGACCATCTTCATCCTACAACTCTC 59.638 44.000 0.00 0.00 0.00 3.20
157 158 5.026121 ACCATCTTCATCCTACAACTCTCA 58.974 41.667 0.00 0.00 0.00 3.27
158 159 5.105146 ACCATCTTCATCCTACAACTCTCAC 60.105 44.000 0.00 0.00 0.00 3.51
159 160 4.703645 TCTTCATCCTACAACTCTCACG 57.296 45.455 0.00 0.00 0.00 4.35
160 161 4.332828 TCTTCATCCTACAACTCTCACGA 58.667 43.478 0.00 0.00 0.00 4.35
161 162 4.765339 TCTTCATCCTACAACTCTCACGAA 59.235 41.667 0.00 0.00 0.00 3.85
162 163 5.419155 TCTTCATCCTACAACTCTCACGAAT 59.581 40.000 0.00 0.00 0.00 3.34
163 164 5.661056 TCATCCTACAACTCTCACGAATT 57.339 39.130 0.00 0.00 0.00 2.17
164 165 5.410924 TCATCCTACAACTCTCACGAATTG 58.589 41.667 0.00 0.00 0.00 2.32
165 166 5.185056 TCATCCTACAACTCTCACGAATTGA 59.815 40.000 0.00 0.00 0.00 2.57
166 167 5.661056 TCCTACAACTCTCACGAATTGAT 57.339 39.130 0.00 0.00 32.17 2.57
167 168 6.769134 TCCTACAACTCTCACGAATTGATA 57.231 37.500 0.00 0.00 32.17 2.15
168 169 7.165460 TCCTACAACTCTCACGAATTGATAA 57.835 36.000 0.00 0.00 32.17 1.75
169 170 7.608153 TCCTACAACTCTCACGAATTGATAAA 58.392 34.615 0.00 0.00 32.17 1.40
170 171 8.258007 TCCTACAACTCTCACGAATTGATAAAT 58.742 33.333 0.00 0.00 32.17 1.40
171 172 8.883731 CCTACAACTCTCACGAATTGATAAATT 58.116 33.333 0.00 0.00 32.17 1.82
177 178 9.449719 ACTCTCACGAATTGATAAATTTTAGGT 57.550 29.630 0.00 0.00 32.17 3.08
178 179 9.922305 CTCTCACGAATTGATAAATTTTAGGTC 57.078 33.333 0.00 0.00 32.17 3.85
179 180 9.443323 TCTCACGAATTGATAAATTTTAGGTCA 57.557 29.630 0.00 0.00 32.17 4.02
182 183 9.450807 CACGAATTGATAAATTTTAGGTCATCC 57.549 33.333 0.00 0.00 0.00 3.51
183 184 9.184523 ACGAATTGATAAATTTTAGGTCATCCA 57.815 29.630 0.00 0.00 35.89 3.41
184 185 9.450807 CGAATTGATAAATTTTAGGTCATCCAC 57.549 33.333 0.00 0.00 35.89 4.02
218 219 7.596749 ATTGATACTGTTCTACAAAACTCCG 57.403 36.000 0.00 0.00 0.00 4.63
219 220 4.927425 TGATACTGTTCTACAAAACTCCGC 59.073 41.667 0.00 0.00 0.00 5.54
220 221 2.132762 ACTGTTCTACAAAACTCCGCG 58.867 47.619 0.00 0.00 0.00 6.46
221 222 2.223876 ACTGTTCTACAAAACTCCGCGA 60.224 45.455 8.23 0.00 0.00 5.87
222 223 2.993899 CTGTTCTACAAAACTCCGCGAT 59.006 45.455 8.23 0.00 0.00 4.58
223 224 3.395639 TGTTCTACAAAACTCCGCGATT 58.604 40.909 8.23 0.00 0.00 3.34
224 225 3.185594 TGTTCTACAAAACTCCGCGATTG 59.814 43.478 8.23 7.32 0.00 2.67
225 226 3.306917 TCTACAAAACTCCGCGATTGA 57.693 42.857 8.23 0.00 0.00 2.57
226 227 3.655486 TCTACAAAACTCCGCGATTGAA 58.345 40.909 8.23 0.00 0.00 2.69
227 228 2.969443 ACAAAACTCCGCGATTGAAG 57.031 45.000 8.23 0.00 0.00 3.02
228 229 1.535462 ACAAAACTCCGCGATTGAAGG 59.465 47.619 8.23 0.00 0.00 3.46
229 230 0.521735 AAAACTCCGCGATTGAAGGC 59.478 50.000 8.23 0.00 0.00 4.35
230 231 1.305930 AAACTCCGCGATTGAAGGCC 61.306 55.000 8.23 0.00 0.00 5.19
231 232 2.897350 CTCCGCGATTGAAGGCCC 60.897 66.667 8.23 0.00 0.00 5.80
232 233 3.680620 CTCCGCGATTGAAGGCCCA 62.681 63.158 8.23 0.00 0.00 5.36
233 234 2.749839 CCGCGATTGAAGGCCCAA 60.750 61.111 8.23 0.00 0.00 4.12
234 235 2.485122 CGCGATTGAAGGCCCAAC 59.515 61.111 0.00 0.00 0.00 3.77
235 236 2.331893 CGCGATTGAAGGCCCAACA 61.332 57.895 0.00 0.00 0.00 3.33
236 237 1.212751 GCGATTGAAGGCCCAACAC 59.787 57.895 0.00 0.00 0.00 3.32
237 238 1.501741 CGATTGAAGGCCCAACACG 59.498 57.895 0.00 4.07 0.00 4.49
238 239 0.953471 CGATTGAAGGCCCAACACGA 60.953 55.000 0.00 0.00 33.99 4.35
239 240 0.521735 GATTGAAGGCCCAACACGAC 59.478 55.000 0.00 0.00 0.00 4.34
240 241 0.110486 ATTGAAGGCCCAACACGACT 59.890 50.000 0.00 0.00 0.00 4.18
241 242 0.759959 TTGAAGGCCCAACACGACTA 59.240 50.000 0.00 0.00 0.00 2.59
242 243 0.981183 TGAAGGCCCAACACGACTAT 59.019 50.000 0.00 0.00 0.00 2.12
243 244 2.181125 TGAAGGCCCAACACGACTATA 58.819 47.619 0.00 0.00 0.00 1.31
244 245 2.568062 TGAAGGCCCAACACGACTATAA 59.432 45.455 0.00 0.00 0.00 0.98
245 246 3.008157 TGAAGGCCCAACACGACTATAAA 59.992 43.478 0.00 0.00 0.00 1.40
246 247 3.261981 AGGCCCAACACGACTATAAAG 57.738 47.619 0.00 0.00 0.00 1.85
247 248 2.835764 AGGCCCAACACGACTATAAAGA 59.164 45.455 0.00 0.00 0.00 2.52
248 249 3.262405 AGGCCCAACACGACTATAAAGAA 59.738 43.478 0.00 0.00 0.00 2.52
249 250 4.080526 AGGCCCAACACGACTATAAAGAAT 60.081 41.667 0.00 0.00 0.00 2.40
250 251 5.129815 AGGCCCAACACGACTATAAAGAATA 59.870 40.000 0.00 0.00 0.00 1.75
251 252 5.818857 GGCCCAACACGACTATAAAGAATAA 59.181 40.000 0.00 0.00 0.00 1.40
252 253 6.018180 GGCCCAACACGACTATAAAGAATAAG 60.018 42.308 0.00 0.00 0.00 1.73
253 254 6.537660 GCCCAACACGACTATAAAGAATAAGT 59.462 38.462 0.00 0.00 0.00 2.24
254 255 7.065443 GCCCAACACGACTATAAAGAATAAGTT 59.935 37.037 0.00 0.00 0.00 2.66
255 256 9.590451 CCCAACACGACTATAAAGAATAAGTTA 57.410 33.333 0.00 0.00 0.00 2.24
285 286 1.217882 GACATTAAGTCGCCATCCCG 58.782 55.000 0.00 0.00 37.53 5.14
286 287 0.814010 ACATTAAGTCGCCATCCCGC 60.814 55.000 0.00 0.00 0.00 6.13
287 288 1.227853 ATTAAGTCGCCATCCCGCC 60.228 57.895 0.00 0.00 0.00 6.13
288 289 1.978455 ATTAAGTCGCCATCCCGCCA 61.978 55.000 0.00 0.00 0.00 5.69
289 290 2.862674 TTAAGTCGCCATCCCGCCAC 62.863 60.000 0.00 0.00 0.00 5.01
296 297 4.429212 CATCCCGCCACGTCGTCA 62.429 66.667 0.00 0.00 0.00 4.35
297 298 4.129737 ATCCCGCCACGTCGTCAG 62.130 66.667 0.00 0.00 0.00 3.51
304 305 4.337060 CACGTCGTCAGTCGGGCA 62.337 66.667 0.00 0.00 40.32 5.36
305 306 3.371063 ACGTCGTCAGTCGGGCAT 61.371 61.111 0.00 0.00 40.32 4.40
306 307 2.579787 CGTCGTCAGTCGGGCATC 60.580 66.667 0.00 0.00 40.32 3.91
307 308 2.885861 GTCGTCAGTCGGGCATCT 59.114 61.111 0.00 0.00 40.32 2.90
308 309 1.712018 CGTCGTCAGTCGGGCATCTA 61.712 60.000 0.00 0.00 40.32 1.98
309 310 0.029567 GTCGTCAGTCGGGCATCTAG 59.970 60.000 0.00 0.00 40.32 2.43
310 311 0.393944 TCGTCAGTCGGGCATCTAGT 60.394 55.000 0.00 0.00 40.32 2.57
311 312 0.029567 CGTCAGTCGGGCATCTAGTC 59.970 60.000 0.00 0.00 35.71 2.59
312 313 1.394618 GTCAGTCGGGCATCTAGTCT 58.605 55.000 0.00 0.00 0.00 3.24
313 314 1.335496 GTCAGTCGGGCATCTAGTCTC 59.665 57.143 0.00 0.00 0.00 3.36
314 315 0.309302 CAGTCGGGCATCTAGTCTCG 59.691 60.000 0.00 0.00 0.00 4.04
315 316 1.008309 GTCGGGCATCTAGTCTCGC 60.008 63.158 0.00 0.00 0.00 5.03
316 317 2.194212 TCGGGCATCTAGTCTCGCC 61.194 63.158 0.00 0.00 44.10 5.54
318 319 2.336809 GGCATCTAGTCTCGCCCG 59.663 66.667 0.00 0.00 38.67 6.13
319 320 2.336809 GCATCTAGTCTCGCCCGG 59.663 66.667 0.00 0.00 0.00 5.73
320 321 2.491022 GCATCTAGTCTCGCCCGGT 61.491 63.158 0.00 0.00 0.00 5.28
321 322 1.655329 CATCTAGTCTCGCCCGGTC 59.345 63.158 0.00 0.00 0.00 4.79
322 323 1.528776 ATCTAGTCTCGCCCGGTCC 60.529 63.158 0.00 0.00 0.00 4.46
323 324 1.997256 ATCTAGTCTCGCCCGGTCCT 61.997 60.000 0.00 0.00 0.00 3.85
324 325 2.124403 TAGTCTCGCCCGGTCCTC 60.124 66.667 0.00 0.00 0.00 3.71
325 326 3.711059 TAGTCTCGCCCGGTCCTCC 62.711 68.421 0.00 0.00 0.00 4.30
335 336 4.035102 GGTCCTCCCCACTGCCAC 62.035 72.222 0.00 0.00 0.00 5.01
336 337 4.394712 GTCCTCCCCACTGCCACG 62.395 72.222 0.00 0.00 0.00 4.94
339 340 4.394712 CTCCCCACTGCCACGGTC 62.395 72.222 0.00 0.00 0.00 4.79
341 342 4.263572 CCCCACTGCCACGGTCAA 62.264 66.667 0.00 0.00 0.00 3.18
342 343 2.669569 CCCACTGCCACGGTCAAG 60.670 66.667 0.00 0.00 0.00 3.02
343 344 2.425592 CCACTGCCACGGTCAAGA 59.574 61.111 0.00 0.00 0.00 3.02
344 345 1.227823 CCACTGCCACGGTCAAGAA 60.228 57.895 0.00 0.00 0.00 2.52
345 346 1.230635 CCACTGCCACGGTCAAGAAG 61.231 60.000 0.00 0.00 0.00 2.85
346 347 1.071471 ACTGCCACGGTCAAGAAGG 59.929 57.895 0.00 0.00 0.00 3.46
347 348 1.371183 CTGCCACGGTCAAGAAGGA 59.629 57.895 0.00 0.00 0.00 3.36
348 349 0.671781 CTGCCACGGTCAAGAAGGAG 60.672 60.000 0.00 0.00 0.00 3.69
349 350 1.376037 GCCACGGTCAAGAAGGAGG 60.376 63.158 0.00 0.00 0.00 4.30
350 351 1.376037 CCACGGTCAAGAAGGAGGC 60.376 63.158 0.00 0.00 0.00 4.70
351 352 1.376037 CACGGTCAAGAAGGAGGCC 60.376 63.158 0.00 0.00 0.00 5.19
352 353 1.536662 ACGGTCAAGAAGGAGGCCT 60.537 57.895 3.86 3.86 33.87 5.19
353 354 0.252103 ACGGTCAAGAAGGAGGCCTA 60.252 55.000 4.42 0.00 31.13 3.93
354 355 0.175989 CGGTCAAGAAGGAGGCCTAC 59.824 60.000 6.98 6.98 31.13 3.18
355 356 1.276622 GGTCAAGAAGGAGGCCTACA 58.723 55.000 19.90 0.00 31.13 2.74
356 357 1.840635 GGTCAAGAAGGAGGCCTACAT 59.159 52.381 19.90 4.48 31.13 2.29
357 358 2.158885 GGTCAAGAAGGAGGCCTACATC 60.159 54.545 19.90 16.07 31.13 3.06
358 359 2.119495 TCAAGAAGGAGGCCTACATCC 58.881 52.381 19.90 9.51 31.13 3.51
359 360 1.141858 CAAGAAGGAGGCCTACATCCC 59.858 57.143 19.90 8.78 36.14 3.85
360 361 0.400670 AGAAGGAGGCCTACATCCCC 60.401 60.000 19.90 7.92 36.14 4.81
361 362 1.759459 GAAGGAGGCCTACATCCCCG 61.759 65.000 19.90 0.00 36.14 5.73
362 363 3.942439 GGAGGCCTACATCCCCGC 61.942 72.222 11.24 0.00 0.00 6.13
363 364 3.942439 GAGGCCTACATCCCCGCC 61.942 72.222 4.42 0.00 41.96 6.13
367 368 2.854032 CCTACATCCCCGCCCCAT 60.854 66.667 0.00 0.00 0.00 4.00
368 369 2.750350 CTACATCCCCGCCCCATC 59.250 66.667 0.00 0.00 0.00 3.51
369 370 3.238497 TACATCCCCGCCCCATCG 61.238 66.667 0.00 0.00 0.00 3.84
371 372 4.935495 CATCCCCGCCCCATCGTG 62.935 72.222 0.00 0.00 0.00 4.35
381 382 4.415150 CCATCGTGGGCAGCACCT 62.415 66.667 0.00 0.00 39.10 4.00
382 383 2.821366 CATCGTGGGCAGCACCTC 60.821 66.667 0.00 0.00 39.10 3.85
383 384 4.101448 ATCGTGGGCAGCACCTCC 62.101 66.667 0.00 0.00 39.10 4.30
386 387 3.958860 GTGGGCAGCACCTCCACT 61.959 66.667 10.47 0.00 45.36 4.00
387 388 2.203922 TGGGCAGCACCTCCACTA 60.204 61.111 0.00 0.00 39.10 2.74
388 389 2.269241 GGGCAGCACCTCCACTAC 59.731 66.667 0.00 0.00 39.10 2.73
389 390 2.294078 GGGCAGCACCTCCACTACT 61.294 63.158 0.00 0.00 39.10 2.57
390 391 1.078848 GGCAGCACCTCCACTACTG 60.079 63.158 0.00 0.00 34.51 2.74
391 392 1.743252 GCAGCACCTCCACTACTGC 60.743 63.158 0.00 0.00 45.95 4.40
392 393 1.078848 CAGCACCTCCACTACTGCC 60.079 63.158 0.00 0.00 0.00 4.85
393 394 1.229336 AGCACCTCCACTACTGCCT 60.229 57.895 0.00 0.00 0.00 4.75
394 395 1.219393 GCACCTCCACTACTGCCTC 59.781 63.158 0.00 0.00 0.00 4.70
395 396 1.544825 GCACCTCCACTACTGCCTCA 61.545 60.000 0.00 0.00 0.00 3.86
396 397 0.976641 CACCTCCACTACTGCCTCAA 59.023 55.000 0.00 0.00 0.00 3.02
397 398 1.347707 CACCTCCACTACTGCCTCAAA 59.652 52.381 0.00 0.00 0.00 2.69
398 399 1.625818 ACCTCCACTACTGCCTCAAAG 59.374 52.381 0.00 0.00 0.00 2.77
399 400 1.065854 CCTCCACTACTGCCTCAAAGG 60.066 57.143 0.00 0.00 38.80 3.11
400 401 0.984230 TCCACTACTGCCTCAAAGGG 59.016 55.000 0.00 0.00 35.37 3.95
407 408 4.035102 GCCTCAAAGGGCCCGACT 62.035 66.667 18.44 1.30 45.92 4.18
408 409 2.045926 CCTCAAAGGGCCCGACTG 60.046 66.667 18.44 15.23 0.00 3.51
409 410 2.750350 CTCAAAGGGCCCGACTGT 59.250 61.111 18.44 0.00 0.00 3.55
410 411 1.073199 CTCAAAGGGCCCGACTGTT 59.927 57.895 18.44 0.59 0.00 3.16
411 412 0.323629 CTCAAAGGGCCCGACTGTTA 59.676 55.000 18.44 0.00 0.00 2.41
412 413 0.323629 TCAAAGGGCCCGACTGTTAG 59.676 55.000 18.44 1.74 0.00 2.34
413 414 0.036306 CAAAGGGCCCGACTGTTAGT 59.964 55.000 18.44 0.00 0.00 2.24
414 415 0.769247 AAAGGGCCCGACTGTTAGTT 59.231 50.000 18.44 0.00 0.00 2.24
415 416 0.036306 AAGGGCCCGACTGTTAGTTG 59.964 55.000 18.44 0.00 0.00 3.16
416 417 1.125711 AGGGCCCGACTGTTAGTTGT 61.126 55.000 18.44 0.00 0.00 3.32
417 418 0.672711 GGGCCCGACTGTTAGTTGTC 60.673 60.000 5.69 0.00 0.00 3.18
418 419 0.672711 GGCCCGACTGTTAGTTGTCC 60.673 60.000 0.00 0.00 0.00 4.02
419 420 0.034337 GCCCGACTGTTAGTTGTCCA 59.966 55.000 0.00 0.00 0.00 4.02
420 421 1.939838 GCCCGACTGTTAGTTGTCCAG 60.940 57.143 0.00 0.00 0.00 3.86
421 422 1.337823 CCCGACTGTTAGTTGTCCAGG 60.338 57.143 0.00 0.00 0.00 4.45
422 423 1.616865 CCGACTGTTAGTTGTCCAGGA 59.383 52.381 0.00 0.00 0.00 3.86
423 424 2.352814 CCGACTGTTAGTTGTCCAGGAG 60.353 54.545 0.00 0.00 0.00 3.69
424 425 2.689646 GACTGTTAGTTGTCCAGGAGC 58.310 52.381 0.00 0.00 0.00 4.70
425 426 2.037251 GACTGTTAGTTGTCCAGGAGCA 59.963 50.000 0.00 0.00 0.00 4.26
426 427 2.438021 ACTGTTAGTTGTCCAGGAGCAA 59.562 45.455 0.00 0.00 0.00 3.91
427 428 3.118038 ACTGTTAGTTGTCCAGGAGCAAA 60.118 43.478 6.16 0.00 0.00 3.68
428 429 3.476552 TGTTAGTTGTCCAGGAGCAAAG 58.523 45.455 6.16 0.00 0.00 2.77
429 430 2.185004 TAGTTGTCCAGGAGCAAAGC 57.815 50.000 6.16 0.00 0.00 3.51
430 431 0.538287 AGTTGTCCAGGAGCAAAGCC 60.538 55.000 6.16 0.00 0.00 4.35
431 432 1.600636 TTGTCCAGGAGCAAAGCCG 60.601 57.895 0.00 0.00 0.00 5.52
432 433 2.050836 TTGTCCAGGAGCAAAGCCGA 62.051 55.000 0.00 0.00 0.00 5.54
433 434 1.743252 GTCCAGGAGCAAAGCCGAG 60.743 63.158 0.00 0.00 0.00 4.63
434 435 2.437359 CCAGGAGCAAAGCCGAGG 60.437 66.667 0.00 0.00 0.00 4.63
435 436 2.348998 CAGGAGCAAAGCCGAGGT 59.651 61.111 0.00 0.00 0.00 3.85
436 437 2.037136 CAGGAGCAAAGCCGAGGTG 61.037 63.158 0.00 0.00 0.00 4.00
437 438 2.747855 GGAGCAAAGCCGAGGTGG 60.748 66.667 0.00 0.00 42.50 4.61
438 439 2.347490 GAGCAAAGCCGAGGTGGA 59.653 61.111 0.00 0.00 42.00 4.02
439 440 1.743252 GAGCAAAGCCGAGGTGGAG 60.743 63.158 0.00 0.00 42.00 3.86
440 441 2.747855 GCAAAGCCGAGGTGGAGG 60.748 66.667 0.00 0.00 42.00 4.30
446 447 2.838225 CCGAGGTGGAGGCGGTAT 60.838 66.667 0.00 0.00 42.00 2.73
447 448 2.417516 CGAGGTGGAGGCGGTATG 59.582 66.667 0.00 0.00 0.00 2.39
448 449 2.109181 GAGGTGGAGGCGGTATGC 59.891 66.667 0.00 0.00 45.38 3.14
464 465 2.813908 GCCCGTAGCGTTGAGGTG 60.814 66.667 0.00 0.00 0.00 4.00
465 466 2.125673 CCCGTAGCGTTGAGGTGG 60.126 66.667 0.00 0.00 0.00 4.61
466 467 2.642254 CCCGTAGCGTTGAGGTGGA 61.642 63.158 0.00 0.00 0.00 4.02
467 468 1.153823 CCGTAGCGTTGAGGTGGAG 60.154 63.158 0.00 0.00 0.00 3.86
468 469 1.153823 CGTAGCGTTGAGGTGGAGG 60.154 63.158 0.00 0.00 0.00 4.30
469 470 1.448013 GTAGCGTTGAGGTGGAGGC 60.448 63.158 0.00 0.00 0.00 4.70
470 471 3.001902 TAGCGTTGAGGTGGAGGCG 62.002 63.158 0.00 0.00 0.00 5.52
472 473 4.003788 CGTTGAGGTGGAGGCGGT 62.004 66.667 0.00 0.00 0.00 5.68
473 474 2.642254 CGTTGAGGTGGAGGCGGTA 61.642 63.158 0.00 0.00 0.00 4.02
474 475 1.905512 GTTGAGGTGGAGGCGGTAT 59.094 57.895 0.00 0.00 0.00 2.73
475 476 0.462047 GTTGAGGTGGAGGCGGTATG 60.462 60.000 0.00 0.00 0.00 2.39
476 477 2.109181 GAGGTGGAGGCGGTATGC 59.891 66.667 0.00 0.00 45.38 3.14
488 489 2.981997 GGTATGCCCGTCCGTTTAG 58.018 57.895 0.00 0.00 0.00 1.85
489 490 0.176449 GGTATGCCCGTCCGTTTAGT 59.824 55.000 0.00 0.00 0.00 2.24
490 491 1.283736 GTATGCCCGTCCGTTTAGTG 58.716 55.000 0.00 0.00 0.00 2.74
491 492 0.460635 TATGCCCGTCCGTTTAGTGC 60.461 55.000 0.00 0.00 0.00 4.40
492 493 3.122971 GCCCGTCCGTTTAGTGCC 61.123 66.667 0.00 0.00 0.00 5.01
493 494 2.344500 CCCGTCCGTTTAGTGCCA 59.656 61.111 0.00 0.00 0.00 4.92
494 495 1.078708 CCCGTCCGTTTAGTGCCAT 60.079 57.895 0.00 0.00 0.00 4.40
495 496 0.675522 CCCGTCCGTTTAGTGCCATT 60.676 55.000 0.00 0.00 0.00 3.16
504 505 5.184864 TCCGTTTAGTGCCATTCATTCATTT 59.815 36.000 0.00 0.00 0.00 2.32
525 526 2.280628 GATGATCCGTGTTGAGGTTCC 58.719 52.381 0.00 0.00 0.00 3.62
570 571 4.282496 AGATTTCTCCATGTCTACCGACT 58.718 43.478 0.00 0.00 40.86 4.18
595 597 5.878116 TCCTGTGTATTTTACTCCCAAATCG 59.122 40.000 0.00 0.00 0.00 3.34
706 712 2.872245 CGTCTCTCTCTCTCCACTGATC 59.128 54.545 0.00 0.00 0.00 2.92
707 713 3.681313 CGTCTCTCTCTCTCCACTGATCA 60.681 52.174 0.00 0.00 0.00 2.92
708 714 3.627577 GTCTCTCTCTCTCCACTGATCAC 59.372 52.174 0.00 0.00 0.00 3.06
709 715 2.951642 CTCTCTCTCTCCACTGATCACC 59.048 54.545 0.00 0.00 0.00 4.02
721 727 1.257750 TGATCACCCACCTCACTCCG 61.258 60.000 0.00 0.00 0.00 4.63
723 729 4.742201 CACCCACCTCACTCCGCG 62.742 72.222 0.00 0.00 0.00 6.46
740 752 0.525882 GCGCCCTCTACTTTCGTCTC 60.526 60.000 0.00 0.00 0.00 3.36
748 760 2.030371 CTACTTTCGTCTCCCCTACCC 58.970 57.143 0.00 0.00 0.00 3.69
766 778 4.377760 TTCGCCCCCGTCCTCTCT 62.378 66.667 0.00 0.00 35.54 3.10
767 779 4.816984 TCGCCCCCGTCCTCTCTC 62.817 72.222 0.00 0.00 35.54 3.20
768 780 4.824515 CGCCCCCGTCCTCTCTCT 62.825 72.222 0.00 0.00 0.00 3.10
769 781 3.151022 GCCCCCGTCCTCTCTCTG 61.151 72.222 0.00 0.00 0.00 3.35
906 933 4.125695 GAGCCGGCCGTTCGTACT 62.126 66.667 26.15 10.98 0.00 2.73
907 934 4.125695 AGCCGGCCGTTCGTACTC 62.126 66.667 26.15 2.24 0.00 2.59
909 936 3.751246 CCGGCCGTTCGTACTCCA 61.751 66.667 26.12 0.00 0.00 3.86
939 966 4.729856 GCGGGCGGTTACACGAGT 62.730 66.667 0.00 0.00 35.47 4.18
940 967 2.807895 CGGGCGGTTACACGAGTG 60.808 66.667 1.13 1.13 35.47 3.51
1112 1140 0.320421 TTCTCCCCGTTTCTTGCTCG 60.320 55.000 0.00 0.00 0.00 5.03
1113 1141 2.358247 TCCCCGTTTCTTGCTCGC 60.358 61.111 0.00 0.00 0.00 5.03
1114 1142 3.788766 CCCCGTTTCTTGCTCGCG 61.789 66.667 0.00 0.00 0.00 5.87
1115 1143 4.445545 CCCGTTTCTTGCTCGCGC 62.446 66.667 0.00 0.00 0.00 6.86
1116 1144 4.776953 CCGTTTCTTGCTCGCGCG 62.777 66.667 26.76 26.76 39.65 6.86
1246 1274 2.566724 GGGATTGGGCTGAATTGAACAA 59.433 45.455 0.00 0.00 0.00 2.83
1249 1277 0.958091 TGGGCTGAATTGAACAACCG 59.042 50.000 0.00 0.00 0.00 4.44
1251 1279 1.611491 GGGCTGAATTGAACAACCGAA 59.389 47.619 0.00 0.00 0.00 4.30
1254 1282 3.489416 GGCTGAATTGAACAACCGAAAAC 59.511 43.478 0.00 0.00 0.00 2.43
1255 1283 3.489416 GCTGAATTGAACAACCGAAAACC 59.511 43.478 0.00 0.00 0.00 3.27
1262 1290 0.825410 ACAACCGAAAACCCCCAAAC 59.175 50.000 0.00 0.00 0.00 2.93
1296 1344 0.962489 CGTAGGCCCTGATCGAATCT 59.038 55.000 0.00 0.00 0.00 2.40
1297 1345 2.160205 CGTAGGCCCTGATCGAATCTA 58.840 52.381 0.00 0.00 0.00 1.98
1298 1346 2.162608 CGTAGGCCCTGATCGAATCTAG 59.837 54.545 0.00 0.00 0.00 2.43
1305 1353 3.574396 CCCTGATCGAATCTAGTAGGCAA 59.426 47.826 0.00 0.00 0.00 4.52
1307 1355 4.985409 CCTGATCGAATCTAGTAGGCAAAC 59.015 45.833 0.00 0.00 0.00 2.93
1356 1406 1.254026 TTAGTCTGGGTCGGTCTGTG 58.746 55.000 0.00 0.00 0.00 3.66
1357 1407 1.248785 TAGTCTGGGTCGGTCTGTGC 61.249 60.000 0.00 0.00 0.00 4.57
1358 1408 2.523168 TCTGGGTCGGTCTGTGCA 60.523 61.111 0.00 0.00 0.00 4.57
1371 1437 2.939103 GTCTGTGCAGAGTTGAACTTGT 59.061 45.455 11.09 0.00 38.27 3.16
1386 1452 2.449031 CTTGTGTAGGAGCCGTGCCA 62.449 60.000 0.00 0.00 0.00 4.92
1430 1553 1.941325 ACATCGGGAGAGCGAAAATC 58.059 50.000 0.00 0.00 45.48 2.17
1485 1608 4.235360 ACACTCTTGCACGATTGTACTAC 58.765 43.478 13.51 0.00 0.00 2.73
1493 1616 4.446385 TGCACGATTGTACTACTTGTCAAC 59.554 41.667 0.00 0.00 0.00 3.18
1526 1649 5.339990 CGCATTACCTGGTTCATTTTTAGG 58.660 41.667 3.84 0.00 34.70 2.69
1553 1676 2.797156 CCGATCTGGTTTATGCTTCTCG 59.203 50.000 0.00 0.00 0.00 4.04
1585 1708 9.181805 CTTTCTTTATTGCAATGCTATCATCAG 57.818 33.333 22.27 3.51 31.27 2.90
1592 1722 4.701171 TGCAATGCTATCATCAGTCACAAA 59.299 37.500 6.82 0.00 31.27 2.83
1593 1723 5.032863 GCAATGCTATCATCAGTCACAAAC 58.967 41.667 0.00 0.00 31.27 2.93
1594 1724 5.260900 CAATGCTATCATCAGTCACAAACG 58.739 41.667 0.00 0.00 31.27 3.60
1610 1740 1.808411 AACGTGCTGGTGAACTATGG 58.192 50.000 0.00 0.00 0.00 2.74
1623 1753 5.163652 GGTGAACTATGGTACCAAAATGCTC 60.164 44.000 20.76 11.30 33.42 4.26
1624 1754 4.634004 TGAACTATGGTACCAAAATGCTCG 59.366 41.667 20.76 0.00 0.00 5.03
1730 1868 0.522180 CCTCTCGTGTACGTGCTTCT 59.478 55.000 4.97 0.00 40.80 2.85
1731 1869 1.736126 CCTCTCGTGTACGTGCTTCTA 59.264 52.381 4.97 0.00 40.80 2.10
1803 1941 2.457366 ACCTGAAGACCACAATCGTC 57.543 50.000 0.00 0.00 0.00 4.20
1812 1950 4.398319 AGACCACAATCGTCTGGATTTTT 58.602 39.130 0.00 0.00 42.77 1.94
1885 2023 3.947196 TCTCAACAACAGCACAGTCATTT 59.053 39.130 0.00 0.00 0.00 2.32
2132 2270 6.588756 TGTTGGATAAAGCTACTGTAGAAACG 59.411 38.462 18.64 0.00 0.00 3.60
2224 2362 3.189606 TGAATACTCACCTGGGGAACAT 58.810 45.455 0.00 0.00 0.00 2.71
2455 2593 3.849911 TCAGAGTCATCTTAGTTTGCCG 58.150 45.455 0.00 0.00 31.64 5.69
2463 2601 5.992217 GTCATCTTAGTTTGCCGGATTCTAT 59.008 40.000 5.05 0.00 0.00 1.98
2563 2704 0.666913 GACCTTATGCCAGCATGCAG 59.333 55.000 21.98 12.49 45.93 4.41
2564 2705 0.033796 ACCTTATGCCAGCATGCAGT 60.034 50.000 21.98 6.43 45.93 4.40
2565 2706 1.212688 ACCTTATGCCAGCATGCAGTA 59.787 47.619 21.98 10.83 45.93 2.74
2566 2707 1.605710 CCTTATGCCAGCATGCAGTAC 59.394 52.381 21.98 6.94 45.93 2.73
2567 2708 2.291365 CTTATGCCAGCATGCAGTACA 58.709 47.619 21.98 12.72 45.93 2.90
2568 2709 2.643995 TATGCCAGCATGCAGTACAT 57.356 45.000 21.98 18.56 45.93 2.29
2593 2734 3.861276 ACCATGTGTTGATCTGCATTG 57.139 42.857 0.00 0.00 0.00 2.82
2925 3102 3.052869 TGCTCACTATAGGGAGGAAGTGA 60.053 47.826 29.08 11.56 44.47 3.41
3180 3357 6.869206 TTGTATTCTTCCTAGGTTGCTAGT 57.131 37.500 9.08 0.00 0.00 2.57
3195 3372 7.875971 AGGTTGCTAGTGAGAAAAATAAGTTG 58.124 34.615 0.00 0.00 0.00 3.16
3220 3397 8.999431 TGAGTTTATACACTCTTTTTCACATCC 58.001 33.333 17.64 0.00 43.32 3.51
3244 3421 4.210331 AGATCAACTTTCAAGGCAGTTGT 58.790 39.130 12.60 3.20 46.76 3.32
3245 3422 4.646492 AGATCAACTTTCAAGGCAGTTGTT 59.354 37.500 12.60 6.32 46.76 2.83
3249 3426 1.069049 CTTTCAAGGCAGTTGTTGGGG 59.931 52.381 0.00 0.00 37.43 4.96
3278 3455 9.874205 CCAACATGGATTAACATTTTGTAGATT 57.126 29.630 0.00 0.00 40.96 2.40
3390 3568 0.813610 TGAACTCTGGTGGCGTTGTG 60.814 55.000 0.00 0.00 0.00 3.33
3411 3589 5.997746 TGTGTTCTTTGCTCTATTTAGTGCT 59.002 36.000 11.60 0.00 41.83 4.40
3412 3590 6.486657 TGTGTTCTTTGCTCTATTTAGTGCTT 59.513 34.615 11.60 0.00 41.83 3.91
3413 3591 7.013274 TGTGTTCTTTGCTCTATTTAGTGCTTT 59.987 33.333 11.60 0.00 41.83 3.51
3414 3592 8.504005 GTGTTCTTTGCTCTATTTAGTGCTTTA 58.496 33.333 11.60 0.00 41.83 1.85
3477 3655 0.171679 TTGCAGCATCAAAGATGGCG 59.828 50.000 8.87 0.00 0.00 5.69
3541 3719 2.367567 GGAGTCCAGACACCACAAGTAA 59.632 50.000 3.60 0.00 41.01 2.24
3544 3722 5.048846 AGTCCAGACACCACAAGTAAATT 57.951 39.130 0.00 0.00 0.00 1.82
3545 3723 5.445964 AGTCCAGACACCACAAGTAAATTT 58.554 37.500 0.00 0.00 0.00 1.82
3603 3781 8.253113 GTGTCAACCATTATCATTGGATTTCTT 58.747 33.333 0.00 0.00 37.69 2.52
3630 3808 2.159324 GCTTCATCTAAAACTGCAGGCC 60.159 50.000 19.93 0.00 0.00 5.19
3634 3812 0.038166 TCTAAAACTGCAGGCCAGGG 59.962 55.000 19.93 3.69 46.14 4.45
3651 3829 4.319177 CCAGGGTAGTGCATAATTCTAGC 58.681 47.826 0.00 0.00 0.00 3.42
3678 3856 3.019564 GTGGCAGGAGATAAAACATGCT 58.980 45.455 0.00 0.00 42.23 3.79
3685 3863 4.639310 AGGAGATAAAACATGCTGCAGAAG 59.361 41.667 20.43 8.48 0.00 2.85
3721 3899 4.925068 AGCGGTTTCAAATAATGATGAGC 58.075 39.130 0.00 0.00 38.03 4.26
3805 3985 3.383698 TGAGGTACTGCTAGCCTTAGT 57.616 47.619 13.29 11.76 41.55 2.24
3817 3997 9.277783 ACTGCTAGCCTTAGTAAAAATATGATG 57.722 33.333 13.29 0.00 0.00 3.07
3883 4063 4.720046 TGTCACCTTGTTTGCCAGTTATA 58.280 39.130 0.00 0.00 0.00 0.98
3981 4161 2.501723 TGGAAGGGTCTTGATGCTAGAC 59.498 50.000 0.00 0.00 41.00 2.59
4059 4239 3.153130 TCCGGCAAACTTGATGATTTCA 58.847 40.909 0.00 0.00 0.00 2.69
4101 4281 3.533606 ATGGACAGATTTGAGGACTCG 57.466 47.619 0.00 0.00 0.00 4.18
4105 4285 3.193691 GGACAGATTTGAGGACTCGAAGA 59.806 47.826 7.93 0.00 36.51 2.87
4125 4305 1.168714 GCACTTCGGAAAGCTCCAAT 58.831 50.000 7.38 0.00 42.58 3.16
4132 4312 0.813821 GGAAAGCTCCAATCCACTGC 59.186 55.000 0.00 0.00 41.96 4.40
4176 4356 2.851263 TACGGTTCCACTCTGCAAAT 57.149 45.000 0.00 0.00 0.00 2.32
4192 4372 7.833183 ACTCTGCAAATGGAAGATTAGATTCTT 59.167 33.333 0.00 0.00 38.65 2.52
4193 4373 8.585471 TCTGCAAATGGAAGATTAGATTCTTT 57.415 30.769 0.00 0.00 36.10 2.52
4217 4397 2.028385 AGGTGGACCTAATGTCACGAAC 60.028 50.000 0.00 0.00 46.48 3.95
4228 4408 0.164647 GTCACGAACAGCAGATGCAC 59.835 55.000 7.68 0.00 45.16 4.57
4362 4542 4.467198 ACGGTATCCCAAAGTTGTAGAG 57.533 45.455 0.00 0.00 0.00 2.43
4383 4563 5.814705 AGAGCTCATTTTGAATAACTCGGAG 59.185 40.000 17.77 2.83 0.00 4.63
4440 4620 1.076705 GCTTGGGATTCCTGGACCC 60.077 63.158 14.13 14.13 43.51 4.46
4470 4650 4.217118 GCAATCACTTCCACTGATTCTTGT 59.783 41.667 0.00 0.00 36.42 3.16
4701 4881 1.038130 CGGGAGCCAGCTACAGTACT 61.038 60.000 3.88 0.00 0.00 2.73
4711 4891 3.449018 CAGCTACAGTACTCCTTGTCCAT 59.551 47.826 0.00 0.00 0.00 3.41
4730 4910 5.523916 GTCCATCTAATAAGCACGTGAACAT 59.476 40.000 22.23 4.99 0.00 2.71
4731 4911 5.753438 TCCATCTAATAAGCACGTGAACATC 59.247 40.000 22.23 0.00 0.00 3.06
4735 4915 2.717580 TAAGCACGTGAACATCGAGT 57.282 45.000 22.23 0.00 0.00 4.18
4746 4926 5.270083 GTGAACATCGAGTCTCATAGTGAG 58.730 45.833 0.00 0.55 45.59 3.51
4784 4964 2.088423 TGGCACAAAAACGTCTTCTGT 58.912 42.857 0.00 0.00 31.92 3.41
4833 5013 1.003233 GTCCAGGGACAGTTGGAGC 60.003 63.158 13.49 0.00 43.80 4.70
4902 5082 7.572759 TGACAATGAGACTTCGTGATTTTTAC 58.427 34.615 0.00 0.00 0.00 2.01
4944 5124 7.015289 GCGCTTCTTTTGATTTAAAATTTCCC 58.985 34.615 0.00 0.00 37.61 3.97
4969 5149 4.339247 AGGATTCCTTTGCATTACATTCCG 59.661 41.667 0.00 0.00 0.00 4.30
4971 5151 5.394115 GGATTCCTTTGCATTACATTCCGTT 60.394 40.000 0.00 0.00 0.00 4.44
4976 5156 4.855715 TTGCATTACATTCCGTTGGAAA 57.144 36.364 1.86 0.00 45.41 3.13
4983 5163 6.994868 TTACATTCCGTTGGAAATTTTTCG 57.005 33.333 1.86 0.00 45.41 3.46
5006 5186 5.293569 CGTCCACTCAAAACTCTTGTAAAGT 59.706 40.000 0.00 0.00 46.34 2.66
5062 5242 4.320690 CGTCGTTGCAAATAAAATCCTGTG 59.679 41.667 0.00 0.00 0.00 3.66
5479 5691 7.066284 ACAAGTAGCATTGATATTCAACCTCAC 59.934 37.037 3.67 0.00 39.45 3.51
5518 5730 6.478512 TGCCCTTCAACTGAAAATTAAAGT 57.521 33.333 0.00 0.00 33.07 2.66
5519 5731 6.883744 TGCCCTTCAACTGAAAATTAAAGTT 58.116 32.000 0.00 0.00 34.52 2.66
5520 5732 8.012957 TGCCCTTCAACTGAAAATTAAAGTTA 57.987 30.769 0.00 0.00 32.96 2.24
5521 5733 7.923878 TGCCCTTCAACTGAAAATTAAAGTTAC 59.076 33.333 0.00 0.00 32.96 2.50
5522 5734 8.141909 GCCCTTCAACTGAAAATTAAAGTTACT 58.858 33.333 0.00 0.00 32.96 2.24
5573 5785 6.375736 TGTTTATGAGGTTGACTTGTGTTTGA 59.624 34.615 0.00 0.00 0.00 2.69
5578 5790 4.997565 AGGTTGACTTGTGTTTGACAATG 58.002 39.130 0.00 0.00 43.78 2.82
5583 5795 7.411804 GGTTGACTTGTGTTTGACAATGAAAAG 60.412 37.037 0.00 0.00 43.78 2.27
5591 5803 5.754406 TGTTTGACAATGAAAAGAATGCTGG 59.246 36.000 0.00 0.00 0.00 4.85
5610 5822 5.642063 TGCTGGACTTAAGTTAGGAATTTCG 59.358 40.000 10.02 0.00 0.00 3.46
5614 5826 6.999871 TGGACTTAAGTTAGGAATTTCGGTTT 59.000 34.615 10.02 0.00 0.00 3.27
5619 5831 9.556030 CTTAAGTTAGGAATTTCGGTTTTGATC 57.444 33.333 0.00 0.00 0.00 2.92
5636 5848 4.071961 TGATCCAATAGGTTGATGTCGG 57.928 45.455 0.00 0.00 37.53 4.79
5675 5887 7.205515 AGGAGATAGAACAATGGAATGAAGT 57.794 36.000 0.00 0.00 0.00 3.01
5694 5906 3.986277 AGTGTTTAAGACCGACGTGATT 58.014 40.909 0.00 0.00 0.00 2.57
5742 5954 5.653769 TCATTCTGGATTCTTTGATGGAACC 59.346 40.000 0.00 0.00 0.00 3.62
5785 5997 2.289882 GCCTACGAGTTAAAGGTGGGTT 60.290 50.000 0.00 0.00 35.04 4.11
5799 6011 3.334881 AGGTGGGTTCCAAAAGATCTGAT 59.665 43.478 0.00 0.00 34.18 2.90
6045 6258 4.271696 TGTGTTCGAATGAGATTGGTCT 57.728 40.909 0.00 0.00 37.42 3.85
6049 6262 5.463724 GTGTTCGAATGAGATTGGTCTATCC 59.536 44.000 0.00 0.00 33.97 2.59
6058 6271 4.489737 AGATTGGTCTATCCGATACCCAA 58.510 43.478 13.50 13.50 40.23 4.12
6108 6321 3.299340 TTCAGTAAGAGCGTCAACCTC 57.701 47.619 0.00 0.00 0.00 3.85
6119 6333 3.322828 AGCGTCAACCTCTGGTTTAGTAA 59.677 43.478 0.00 0.00 44.33 2.24
6161 6381 7.026631 TCATATTGATGGAAAACCAATCGTC 57.973 36.000 0.00 0.00 33.21 4.20
6273 6493 0.837940 GGGGTAAGGTCCTCATCCAC 59.162 60.000 0.00 0.00 0.00 4.02
6393 6632 6.116126 CCTTATACTTTCCCACTTCCAAGAG 58.884 44.000 0.00 0.00 0.00 2.85
6468 6707 5.779529 ACTTACTGAAGAAAGTACACCGA 57.220 39.130 0.00 0.00 34.23 4.69
6474 6713 2.017783 GAAAGTACACCGACGCGCA 61.018 57.895 5.73 0.00 0.00 6.09
6477 6716 3.467119 GTACACCGACGCGCACAG 61.467 66.667 5.73 0.00 0.00 3.66
6507 6746 4.284550 TTCGCCAAGGCCCTGCTT 62.285 61.111 5.34 0.00 37.98 3.91
6518 6757 1.376942 CCCTGCTTGCTCTGGACAG 60.377 63.158 0.00 0.00 0.00 3.51
6522 6761 0.035881 TGCTTGCTCTGGACAGGAAG 59.964 55.000 0.00 0.00 43.02 3.46
6746 6985 2.764128 CGGGAGCCTCAGCCCTTA 60.764 66.667 0.00 0.00 42.40 2.69
6814 7053 9.599322 GATCTGTTGTTCTTTTGTTGTATGTAG 57.401 33.333 0.00 0.00 0.00 2.74
6851 7090 6.036083 CACTTGTACTGTAGTGAATACATGCC 59.964 42.308 14.32 0.00 43.44 4.40
6868 7107 2.081585 GCCCCAAGAGGAACCCAACT 62.082 60.000 0.00 0.00 38.24 3.16
6869 7108 0.482887 CCCCAAGAGGAACCCAACTT 59.517 55.000 0.00 0.00 38.24 2.66
6888 7127 3.978672 ACTTTTTAGGGTACAGGGAGTGT 59.021 43.478 0.00 0.00 43.86 3.55
6905 7149 5.452077 GGGAGTGTGACTCAGGTGTAATATC 60.452 48.000 6.10 0.00 46.79 1.63
6906 7150 5.127194 GGAGTGTGACTCAGGTGTAATATCA 59.873 44.000 6.10 0.00 46.79 2.15
6907 7151 6.351033 GGAGTGTGACTCAGGTGTAATATCAA 60.351 42.308 6.10 0.00 46.79 2.57
6909 7153 6.874134 AGTGTGACTCAGGTGTAATATCAAAC 59.126 38.462 0.00 0.00 0.00 2.93
6911 7155 7.172532 GTGTGACTCAGGTGTAATATCAAACAA 59.827 37.037 0.00 0.00 0.00 2.83
6912 7156 7.387673 TGTGACTCAGGTGTAATATCAAACAAG 59.612 37.037 0.00 0.00 0.00 3.16
6939 7184 1.761449 TCAGGTTTCAAGTGCAAGCA 58.239 45.000 0.00 0.00 0.00 3.91
6982 7227 5.768317 GCTCAAAGCCTACAAACAAATACA 58.232 37.500 0.00 0.00 34.48 2.29
6983 7228 5.858581 GCTCAAAGCCTACAAACAAATACAG 59.141 40.000 0.00 0.00 34.48 2.74
6985 7230 7.575414 TCAAAGCCTACAAACAAATACAGAA 57.425 32.000 0.00 0.00 0.00 3.02
7068 7314 1.128692 CGAATCAAAGACCACGAAGCC 59.871 52.381 0.00 0.00 0.00 4.35
7152 7584 1.153349 GGACTTGACCATCCGGCTC 60.153 63.158 0.00 0.00 34.57 4.70
7525 7957 1.003355 AAGTGGAGGTGCGTCATGG 60.003 57.895 0.00 0.00 0.00 3.66
7563 7995 1.077716 GTACCCACCACCATCTGCC 60.078 63.158 0.00 0.00 0.00 4.85
7587 8019 3.216292 GTTGCCGTGGTGGTTGCT 61.216 61.111 0.00 0.00 41.21 3.91
7633 8065 2.202878 GCGCGAGGAATGGTAGCA 60.203 61.111 12.10 0.00 0.00 3.49
7659 8091 2.268920 GGGCTTGCACGATGAGGA 59.731 61.111 0.00 0.00 0.00 3.71
7673 8105 3.687321 GAGGAGCCGCCATGAGCAA 62.687 63.158 0.00 0.00 44.04 3.91
7679 8111 3.570638 CGCCATGAGCAAGCCGAG 61.571 66.667 0.00 0.00 44.04 4.63
7680 8112 2.124983 GCCATGAGCAAGCCGAGA 60.125 61.111 0.00 0.00 42.97 4.04
7681 8113 1.746615 GCCATGAGCAAGCCGAGAA 60.747 57.895 0.00 0.00 42.97 2.87
7682 8114 1.712977 GCCATGAGCAAGCCGAGAAG 61.713 60.000 0.00 0.00 42.97 2.85
7683 8115 1.712977 CCATGAGCAAGCCGAGAAGC 61.713 60.000 0.00 0.00 0.00 3.86
7684 8116 1.022982 CATGAGCAAGCCGAGAAGCA 61.023 55.000 0.00 0.00 34.23 3.91
7685 8117 0.743701 ATGAGCAAGCCGAGAAGCAG 60.744 55.000 0.00 0.00 34.23 4.24
7700 8132 5.423015 GAGAAGCAGAGATGTGGTGATAAA 58.577 41.667 0.00 0.00 0.00 1.40
7705 8137 3.875727 CAGAGATGTGGTGATAAAGCTGG 59.124 47.826 0.00 0.00 0.00 4.85
7751 8190 7.012044 GTGTGTGTTCTTGTAGTTGTAGGAATT 59.988 37.037 0.00 0.00 0.00 2.17
7757 8196 7.962964 TCTTGTAGTTGTAGGAATTGAACAG 57.037 36.000 0.00 0.00 0.00 3.16
7779 8218 3.691118 GCAGCTTGGATGATTGTCTGTTA 59.309 43.478 0.00 0.00 0.00 2.41
7780 8219 4.201891 GCAGCTTGGATGATTGTCTGTTAG 60.202 45.833 0.00 0.00 0.00 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.197306 TGGTGATACAAGTGTAGTATGAATAGT 57.803 33.333 0.00 0.00 32.60 2.12
8 9 8.928448 AGATGGTGATACAAGTGTAGTATGAAT 58.072 33.333 0.00 0.00 32.60 2.57
9 10 8.306313 AGATGGTGATACAAGTGTAGTATGAA 57.694 34.615 0.00 0.00 32.60 2.57
10 11 7.780271 AGAGATGGTGATACAAGTGTAGTATGA 59.220 37.037 0.00 0.00 32.60 2.15
11 12 7.946207 AGAGATGGTGATACAAGTGTAGTATG 58.054 38.462 0.00 0.00 32.60 2.39
12 13 8.540507 AAGAGATGGTGATACAAGTGTAGTAT 57.459 34.615 0.00 0.00 35.01 2.12
13 14 7.201705 CGAAGAGATGGTGATACAAGTGTAGTA 60.202 40.741 0.00 0.00 33.52 1.82
14 15 6.404844 CGAAGAGATGGTGATACAAGTGTAGT 60.405 42.308 0.00 0.00 33.52 2.73
15 16 5.974158 CGAAGAGATGGTGATACAAGTGTAG 59.026 44.000 0.00 0.00 33.52 2.74
16 17 5.678871 GCGAAGAGATGGTGATACAAGTGTA 60.679 44.000 0.00 0.00 34.67 2.90
17 18 4.748892 CGAAGAGATGGTGATACAAGTGT 58.251 43.478 0.00 0.00 0.00 3.55
18 19 3.553511 GCGAAGAGATGGTGATACAAGTG 59.446 47.826 0.00 0.00 0.00 3.16
19 20 3.449018 AGCGAAGAGATGGTGATACAAGT 59.551 43.478 0.00 0.00 0.00 3.16
20 21 3.801050 CAGCGAAGAGATGGTGATACAAG 59.199 47.826 0.00 0.00 35.69 3.16
21 22 3.447229 TCAGCGAAGAGATGGTGATACAA 59.553 43.478 0.00 0.00 37.66 2.41
22 23 3.023832 TCAGCGAAGAGATGGTGATACA 58.976 45.455 0.00 0.00 37.66 2.29
23 24 3.717400 TCAGCGAAGAGATGGTGATAC 57.283 47.619 0.00 0.00 37.66 2.24
24 25 3.701542 AGTTCAGCGAAGAGATGGTGATA 59.298 43.478 0.00 0.00 41.67 2.15
25 26 2.499289 AGTTCAGCGAAGAGATGGTGAT 59.501 45.455 0.00 0.00 41.67 3.06
26 27 1.895798 AGTTCAGCGAAGAGATGGTGA 59.104 47.619 0.00 0.00 40.52 4.02
27 28 2.376808 AGTTCAGCGAAGAGATGGTG 57.623 50.000 0.00 0.00 36.78 4.17
28 29 3.093057 ACTAGTTCAGCGAAGAGATGGT 58.907 45.455 0.00 0.00 36.78 3.55
29 30 3.443037 CACTAGTTCAGCGAAGAGATGG 58.557 50.000 0.00 0.00 36.78 3.51
30 31 2.857152 GCACTAGTTCAGCGAAGAGATG 59.143 50.000 0.00 0.00 37.65 2.90
31 32 2.493675 TGCACTAGTTCAGCGAAGAGAT 59.506 45.455 0.00 0.00 0.00 2.75
32 33 1.886542 TGCACTAGTTCAGCGAAGAGA 59.113 47.619 0.00 0.00 0.00 3.10
33 34 1.989165 GTGCACTAGTTCAGCGAAGAG 59.011 52.381 10.32 0.00 0.00 2.85
34 35 1.336887 GGTGCACTAGTTCAGCGAAGA 60.337 52.381 17.98 0.00 0.00 2.87
35 36 1.071605 GGTGCACTAGTTCAGCGAAG 58.928 55.000 17.98 0.00 0.00 3.79
36 37 0.679505 AGGTGCACTAGTTCAGCGAA 59.320 50.000 17.98 0.00 35.99 4.70
37 38 1.541379 TAGGTGCACTAGTTCAGCGA 58.459 50.000 17.98 10.70 35.99 4.93
38 39 2.586258 ATAGGTGCACTAGTTCAGCG 57.414 50.000 17.98 0.00 34.56 5.18
39 40 6.334102 ACTATATAGGTGCACTAGTTCAGC 57.666 41.667 17.98 15.65 34.56 4.26
40 41 8.198109 ACAAACTATATAGGTGCACTAGTTCAG 58.802 37.037 21.74 19.32 32.87 3.02
41 42 8.074613 ACAAACTATATAGGTGCACTAGTTCA 57.925 34.615 21.74 0.00 32.87 3.18
42 43 7.378995 CGACAAACTATATAGGTGCACTAGTTC 59.621 40.741 21.74 12.90 32.87 3.01
43 44 7.147949 ACGACAAACTATATAGGTGCACTAGTT 60.148 37.037 17.98 17.95 34.89 2.24
44 45 6.320672 ACGACAAACTATATAGGTGCACTAGT 59.679 38.462 17.98 12.97 34.56 2.57
45 46 6.736123 ACGACAAACTATATAGGTGCACTAG 58.264 40.000 17.98 12.31 34.56 2.57
46 47 6.704289 ACGACAAACTATATAGGTGCACTA 57.296 37.500 17.98 7.61 35.80 2.74
47 48 5.593679 ACGACAAACTATATAGGTGCACT 57.406 39.130 17.98 5.41 0.00 4.40
48 49 5.579511 ACAACGACAAACTATATAGGTGCAC 59.420 40.000 8.80 8.80 0.00 4.57
49 50 5.726397 ACAACGACAAACTATATAGGTGCA 58.274 37.500 14.25 0.00 0.00 4.57
50 51 6.657836 AACAACGACAAACTATATAGGTGC 57.342 37.500 14.25 7.17 0.00 5.01
51 52 7.960738 CCAAAACAACGACAAACTATATAGGTG 59.039 37.037 14.25 12.98 0.00 4.00
52 53 7.879160 TCCAAAACAACGACAAACTATATAGGT 59.121 33.333 14.25 4.38 0.00 3.08
53 54 8.259049 TCCAAAACAACGACAAACTATATAGG 57.741 34.615 14.25 0.00 0.00 2.57
54 55 9.702726 CATCCAAAACAACGACAAACTATATAG 57.297 33.333 8.27 8.27 0.00 1.31
55 56 9.221933 ACATCCAAAACAACGACAAACTATATA 57.778 29.630 0.00 0.00 0.00 0.86
56 57 8.020819 CACATCCAAAACAACGACAAACTATAT 58.979 33.333 0.00 0.00 0.00 0.86
57 58 7.012515 ACACATCCAAAACAACGACAAACTATA 59.987 33.333 0.00 0.00 0.00 1.31
58 59 6.183360 ACACATCCAAAACAACGACAAACTAT 60.183 34.615 0.00 0.00 0.00 2.12
59 60 5.124138 ACACATCCAAAACAACGACAAACTA 59.876 36.000 0.00 0.00 0.00 2.24
60 61 4.082463 ACACATCCAAAACAACGACAAACT 60.082 37.500 0.00 0.00 0.00 2.66
61 62 4.170256 ACACATCCAAAACAACGACAAAC 58.830 39.130 0.00 0.00 0.00 2.93
62 63 4.442375 ACACATCCAAAACAACGACAAA 57.558 36.364 0.00 0.00 0.00 2.83
63 64 4.442375 AACACATCCAAAACAACGACAA 57.558 36.364 0.00 0.00 0.00 3.18
64 65 4.169508 CAAACACATCCAAAACAACGACA 58.830 39.130 0.00 0.00 0.00 4.35
65 66 3.549873 CCAAACACATCCAAAACAACGAC 59.450 43.478 0.00 0.00 0.00 4.34
66 67 3.429547 CCCAAACACATCCAAAACAACGA 60.430 43.478 0.00 0.00 0.00 3.85
67 68 2.863137 CCCAAACACATCCAAAACAACG 59.137 45.455 0.00 0.00 0.00 4.10
68 69 3.868661 GTCCCAAACACATCCAAAACAAC 59.131 43.478 0.00 0.00 0.00 3.32
69 70 3.515502 TGTCCCAAACACATCCAAAACAA 59.484 39.130 0.00 0.00 31.20 2.83
70 71 3.099905 TGTCCCAAACACATCCAAAACA 58.900 40.909 0.00 0.00 31.20 2.83
71 72 3.810310 TGTCCCAAACACATCCAAAAC 57.190 42.857 0.00 0.00 31.20 2.43
72 73 5.835819 TCTTATGTCCCAAACACATCCAAAA 59.164 36.000 0.00 0.00 41.75 2.44
73 74 5.389520 TCTTATGTCCCAAACACATCCAAA 58.610 37.500 0.00 0.00 41.75 3.28
74 75 4.991776 TCTTATGTCCCAAACACATCCAA 58.008 39.130 0.00 0.00 41.75 3.53
75 76 4.649267 TCTTATGTCCCAAACACATCCA 57.351 40.909 0.00 0.00 41.75 3.41
76 77 5.975693 TTTCTTATGTCCCAAACACATCC 57.024 39.130 0.00 0.00 41.75 3.51
77 78 8.306761 AGAAATTTCTTATGTCCCAAACACATC 58.693 33.333 15.11 0.00 35.70 3.06
78 79 8.193953 AGAAATTTCTTATGTCCCAAACACAT 57.806 30.769 15.11 0.00 35.70 3.21
79 80 7.595819 AGAAATTTCTTATGTCCCAAACACA 57.404 32.000 15.11 0.00 35.70 3.72
80 81 7.095649 GCAAGAAATTTCTTATGTCCCAAACAC 60.096 37.037 28.40 3.65 45.23 3.32
81 82 6.928492 GCAAGAAATTTCTTATGTCCCAAACA 59.072 34.615 28.40 0.00 45.23 2.83
82 83 6.928492 TGCAAGAAATTTCTTATGTCCCAAAC 59.072 34.615 28.40 8.26 45.23 2.93
83 84 7.060383 TGCAAGAAATTTCTTATGTCCCAAA 57.940 32.000 28.40 7.89 45.23 3.28
84 85 6.662865 TGCAAGAAATTTCTTATGTCCCAA 57.337 33.333 28.40 9.17 45.23 4.12
85 86 6.855763 ATGCAAGAAATTTCTTATGTCCCA 57.144 33.333 28.40 18.76 45.23 4.37
86 87 7.064966 CCAAATGCAAGAAATTTCTTATGTCCC 59.935 37.037 28.40 14.91 45.23 4.46
87 88 7.603784 ACCAAATGCAAGAAATTTCTTATGTCC 59.396 33.333 28.40 16.29 45.23 4.02
88 89 8.538409 ACCAAATGCAAGAAATTTCTTATGTC 57.462 30.769 28.40 18.70 45.23 3.06
89 90 8.776470 CAACCAAATGCAAGAAATTTCTTATGT 58.224 29.630 28.40 14.82 45.23 2.29
90 91 7.747357 GCAACCAAATGCAAGAAATTTCTTATG 59.253 33.333 28.40 20.59 45.23 1.90
91 92 7.809665 GCAACCAAATGCAAGAAATTTCTTAT 58.190 30.769 28.40 18.58 45.23 1.73
92 93 7.188468 GCAACCAAATGCAAGAAATTTCTTA 57.812 32.000 28.40 17.27 45.23 2.10
94 95 5.678132 GCAACCAAATGCAAGAAATTTCT 57.322 34.783 15.11 15.11 45.70 2.52
105 106 2.514205 ACAACTCTGCAACCAAATGC 57.486 45.000 0.00 0.00 46.58 3.56
106 107 4.431809 TCAAACAACTCTGCAACCAAATG 58.568 39.130 0.00 0.00 0.00 2.32
107 108 4.402155 TCTCAAACAACTCTGCAACCAAAT 59.598 37.500 0.00 0.00 0.00 2.32
108 109 3.761218 TCTCAAACAACTCTGCAACCAAA 59.239 39.130 0.00 0.00 0.00 3.28
109 110 3.351740 TCTCAAACAACTCTGCAACCAA 58.648 40.909 0.00 0.00 0.00 3.67
110 111 2.945008 CTCTCAAACAACTCTGCAACCA 59.055 45.455 0.00 0.00 0.00 3.67
111 112 3.206150 TCTCTCAAACAACTCTGCAACC 58.794 45.455 0.00 0.00 0.00 3.77
112 113 4.025313 GTCTCTCTCAAACAACTCTGCAAC 60.025 45.833 0.00 0.00 0.00 4.17
113 114 4.122776 GTCTCTCTCAAACAACTCTGCAA 58.877 43.478 0.00 0.00 0.00 4.08
114 115 3.493350 GGTCTCTCTCAAACAACTCTGCA 60.493 47.826 0.00 0.00 0.00 4.41
115 116 3.063485 GGTCTCTCTCAAACAACTCTGC 58.937 50.000 0.00 0.00 0.00 4.26
116 117 4.327982 TGGTCTCTCTCAAACAACTCTG 57.672 45.455 0.00 0.00 0.00 3.35
117 118 4.837860 AGATGGTCTCTCTCAAACAACTCT 59.162 41.667 0.00 0.00 0.00 3.24
118 119 5.146010 AGATGGTCTCTCTCAAACAACTC 57.854 43.478 0.00 0.00 0.00 3.01
119 120 5.070981 TGAAGATGGTCTCTCTCAAACAACT 59.929 40.000 0.00 0.00 31.03 3.16
120 121 5.300752 TGAAGATGGTCTCTCTCAAACAAC 58.699 41.667 0.00 0.00 31.03 3.32
121 122 5.551305 TGAAGATGGTCTCTCTCAAACAA 57.449 39.130 0.00 0.00 31.03 2.83
122 123 5.337894 GGATGAAGATGGTCTCTCTCAAACA 60.338 44.000 0.00 0.00 31.03 2.83
123 124 5.104982 AGGATGAAGATGGTCTCTCTCAAAC 60.105 44.000 0.00 0.00 31.03 2.93
124 125 5.028802 AGGATGAAGATGGTCTCTCTCAAA 58.971 41.667 0.00 0.00 31.03 2.69
125 126 4.618635 AGGATGAAGATGGTCTCTCTCAA 58.381 43.478 0.00 0.00 31.03 3.02
126 127 4.262891 AGGATGAAGATGGTCTCTCTCA 57.737 45.455 0.00 0.00 31.03 3.27
127 128 5.136828 TGTAGGATGAAGATGGTCTCTCTC 58.863 45.833 0.00 0.00 31.03 3.20
128 129 5.136068 TGTAGGATGAAGATGGTCTCTCT 57.864 43.478 0.00 0.00 31.03 3.10
129 130 5.362430 AGTTGTAGGATGAAGATGGTCTCTC 59.638 44.000 0.00 0.00 31.03 3.20
130 131 5.276440 AGTTGTAGGATGAAGATGGTCTCT 58.724 41.667 0.00 0.00 34.96 3.10
131 132 5.362430 AGAGTTGTAGGATGAAGATGGTCTC 59.638 44.000 0.00 0.00 0.00 3.36
132 133 5.276440 AGAGTTGTAGGATGAAGATGGTCT 58.724 41.667 0.00 0.00 0.00 3.85
133 134 5.127845 TGAGAGTTGTAGGATGAAGATGGTC 59.872 44.000 0.00 0.00 0.00 4.02
134 135 5.026121 TGAGAGTTGTAGGATGAAGATGGT 58.974 41.667 0.00 0.00 0.00 3.55
135 136 5.355596 GTGAGAGTTGTAGGATGAAGATGG 58.644 45.833 0.00 0.00 0.00 3.51
136 137 5.039984 CGTGAGAGTTGTAGGATGAAGATG 58.960 45.833 0.00 0.00 0.00 2.90
137 138 4.950475 TCGTGAGAGTTGTAGGATGAAGAT 59.050 41.667 0.00 0.00 34.84 2.40
138 139 4.332828 TCGTGAGAGTTGTAGGATGAAGA 58.667 43.478 0.00 0.00 34.84 2.87
139 140 4.703645 TCGTGAGAGTTGTAGGATGAAG 57.296 45.455 0.00 0.00 34.84 3.02
140 141 5.661056 ATTCGTGAGAGTTGTAGGATGAA 57.339 39.130 0.00 0.00 43.69 2.57
141 142 5.661056 AATTCGTGAGAGTTGTAGGATGA 57.339 39.130 0.00 0.00 43.69 2.92
151 152 9.449719 ACCTAAAATTTATCAATTCGTGAGAGT 57.550 29.630 0.00 0.00 43.69 3.24
152 153 9.922305 GACCTAAAATTTATCAATTCGTGAGAG 57.078 33.333 0.00 0.00 43.69 3.20
153 154 9.443323 TGACCTAAAATTTATCAATTCGTGAGA 57.557 29.630 0.00 0.00 40.43 3.27
156 157 9.450807 GGATGACCTAAAATTTATCAATTCGTG 57.549 33.333 0.00 0.00 30.80 4.35
157 158 9.184523 TGGATGACCTAAAATTTATCAATTCGT 57.815 29.630 0.00 0.00 37.04 3.85
158 159 9.450807 GTGGATGACCTAAAATTTATCAATTCG 57.549 33.333 0.00 0.00 37.04 3.34
192 193 8.504005 CGGAGTTTTGTAGAACAGTATCAATTT 58.496 33.333 0.00 0.00 31.94 1.82
193 194 7.360946 GCGGAGTTTTGTAGAACAGTATCAATT 60.361 37.037 0.00 0.00 31.94 2.32
194 195 6.092259 GCGGAGTTTTGTAGAACAGTATCAAT 59.908 38.462 0.00 0.00 31.94 2.57
195 196 5.407387 GCGGAGTTTTGTAGAACAGTATCAA 59.593 40.000 0.00 0.00 31.94 2.57
196 197 4.927425 GCGGAGTTTTGTAGAACAGTATCA 59.073 41.667 0.00 0.00 31.94 2.15
197 198 4.031426 CGCGGAGTTTTGTAGAACAGTATC 59.969 45.833 0.00 0.00 31.94 2.24
198 199 3.924686 CGCGGAGTTTTGTAGAACAGTAT 59.075 43.478 0.00 0.00 31.94 2.12
199 200 3.004629 TCGCGGAGTTTTGTAGAACAGTA 59.995 43.478 6.13 0.00 31.94 2.74
200 201 2.132762 CGCGGAGTTTTGTAGAACAGT 58.867 47.619 0.00 0.00 31.94 3.55
201 202 2.400399 TCGCGGAGTTTTGTAGAACAG 58.600 47.619 6.13 0.00 31.94 3.16
202 203 2.512485 TCGCGGAGTTTTGTAGAACA 57.488 45.000 6.13 0.00 31.94 3.18
203 204 3.430895 TCAATCGCGGAGTTTTGTAGAAC 59.569 43.478 6.13 0.00 0.00 3.01
204 205 3.655486 TCAATCGCGGAGTTTTGTAGAA 58.345 40.909 6.13 0.00 0.00 2.10
205 206 3.306917 TCAATCGCGGAGTTTTGTAGA 57.693 42.857 6.13 0.00 0.00 2.59
206 207 3.181520 CCTTCAATCGCGGAGTTTTGTAG 60.182 47.826 6.13 6.34 0.00 2.74
207 208 2.739913 CCTTCAATCGCGGAGTTTTGTA 59.260 45.455 6.13 0.00 0.00 2.41
208 209 1.535462 CCTTCAATCGCGGAGTTTTGT 59.465 47.619 6.13 0.00 0.00 2.83
209 210 1.729149 GCCTTCAATCGCGGAGTTTTG 60.729 52.381 6.13 3.39 0.00 2.44
210 211 0.521735 GCCTTCAATCGCGGAGTTTT 59.478 50.000 6.13 0.00 0.00 2.43
211 212 1.305930 GGCCTTCAATCGCGGAGTTT 61.306 55.000 6.13 0.00 0.00 2.66
212 213 1.745489 GGCCTTCAATCGCGGAGTT 60.745 57.895 6.13 0.00 0.00 3.01
213 214 2.125106 GGCCTTCAATCGCGGAGT 60.125 61.111 6.13 0.00 0.00 3.85
214 215 2.897350 GGGCCTTCAATCGCGGAG 60.897 66.667 6.13 0.00 0.00 4.63
215 216 3.261039 TTGGGCCTTCAATCGCGGA 62.261 57.895 6.13 0.00 0.00 5.54
216 217 2.749839 TTGGGCCTTCAATCGCGG 60.750 61.111 6.13 0.00 0.00 6.46
217 218 2.331893 TGTTGGGCCTTCAATCGCG 61.332 57.895 4.53 0.00 0.00 5.87
218 219 1.212751 GTGTTGGGCCTTCAATCGC 59.787 57.895 4.53 0.00 0.00 4.58
219 220 0.953471 TCGTGTTGGGCCTTCAATCG 60.953 55.000 4.53 8.97 0.00 3.34
220 221 0.521735 GTCGTGTTGGGCCTTCAATC 59.478 55.000 4.53 0.00 0.00 2.67
221 222 0.110486 AGTCGTGTTGGGCCTTCAAT 59.890 50.000 4.53 0.00 0.00 2.57
222 223 0.759959 TAGTCGTGTTGGGCCTTCAA 59.240 50.000 4.53 0.00 0.00 2.69
223 224 0.981183 ATAGTCGTGTTGGGCCTTCA 59.019 50.000 4.53 0.45 0.00 3.02
224 225 2.973694 TATAGTCGTGTTGGGCCTTC 57.026 50.000 4.53 0.00 0.00 3.46
225 226 3.262405 TCTTTATAGTCGTGTTGGGCCTT 59.738 43.478 4.53 0.00 0.00 4.35
226 227 2.835764 TCTTTATAGTCGTGTTGGGCCT 59.164 45.455 4.53 0.00 0.00 5.19
227 228 3.255969 TCTTTATAGTCGTGTTGGGCC 57.744 47.619 0.00 0.00 0.00 5.80
228 229 6.537660 ACTTATTCTTTATAGTCGTGTTGGGC 59.462 38.462 0.00 0.00 0.00 5.36
229 230 8.488651 AACTTATTCTTTATAGTCGTGTTGGG 57.511 34.615 0.00 0.00 0.00 4.12
252 253 9.379811 GCGACTTAATGTCTACTACTACATAAC 57.620 37.037 0.00 0.00 43.25 1.89
253 254 8.562892 GGCGACTTAATGTCTACTACTACATAA 58.437 37.037 0.00 0.00 43.25 1.90
254 255 7.716560 TGGCGACTTAATGTCTACTACTACATA 59.283 37.037 0.00 0.00 43.25 2.29
255 256 6.544931 TGGCGACTTAATGTCTACTACTACAT 59.455 38.462 0.00 0.00 43.25 2.29
256 257 5.882000 TGGCGACTTAATGTCTACTACTACA 59.118 40.000 0.00 0.00 43.25 2.74
257 258 6.369059 TGGCGACTTAATGTCTACTACTAC 57.631 41.667 0.00 0.00 43.25 2.73
258 259 6.206243 GGATGGCGACTTAATGTCTACTACTA 59.794 42.308 0.00 0.00 43.25 1.82
259 260 5.009811 GGATGGCGACTTAATGTCTACTACT 59.990 44.000 0.00 0.00 43.25 2.57
260 261 5.221130 GGATGGCGACTTAATGTCTACTAC 58.779 45.833 0.00 0.00 43.25 2.73
261 262 4.280174 GGGATGGCGACTTAATGTCTACTA 59.720 45.833 0.00 0.00 43.25 1.82
262 263 3.069729 GGGATGGCGACTTAATGTCTACT 59.930 47.826 0.00 0.00 43.25 2.57
263 264 3.391049 GGGATGGCGACTTAATGTCTAC 58.609 50.000 0.00 0.00 43.25 2.59
264 265 2.035449 CGGGATGGCGACTTAATGTCTA 59.965 50.000 0.00 0.00 43.25 2.59
265 266 1.202533 CGGGATGGCGACTTAATGTCT 60.203 52.381 0.00 0.00 43.25 3.41
266 267 1.217882 CGGGATGGCGACTTAATGTC 58.782 55.000 0.00 0.00 42.06 3.06
267 268 0.814010 GCGGGATGGCGACTTAATGT 60.814 55.000 0.00 0.00 0.00 2.71
268 269 1.507141 GGCGGGATGGCGACTTAATG 61.507 60.000 0.00 0.00 0.00 1.90
269 270 1.227853 GGCGGGATGGCGACTTAAT 60.228 57.895 0.00 0.00 0.00 1.40
270 271 2.188469 GGCGGGATGGCGACTTAA 59.812 61.111 0.00 0.00 0.00 1.85
279 280 4.429212 TGACGACGTGGCGGGATG 62.429 66.667 4.58 0.00 35.12 3.51
280 281 4.129737 CTGACGACGTGGCGGGAT 62.130 66.667 4.58 0.00 35.12 3.85
287 288 3.626680 ATGCCCGACTGACGACGTG 62.627 63.158 4.58 0.00 45.77 4.49
288 289 3.338126 GATGCCCGACTGACGACGT 62.338 63.158 0.00 0.00 45.77 4.34
289 290 1.712018 TAGATGCCCGACTGACGACG 61.712 60.000 0.22 0.00 45.77 5.12
290 291 0.029567 CTAGATGCCCGACTGACGAC 59.970 60.000 0.22 0.00 45.77 4.34
291 292 0.393944 ACTAGATGCCCGACTGACGA 60.394 55.000 0.00 0.00 45.77 4.20
292 293 0.029567 GACTAGATGCCCGACTGACG 59.970 60.000 0.00 0.00 42.18 4.35
293 294 1.335496 GAGACTAGATGCCCGACTGAC 59.665 57.143 0.00 0.00 0.00 3.51
294 295 1.681538 GAGACTAGATGCCCGACTGA 58.318 55.000 0.00 0.00 0.00 3.41
295 296 0.309302 CGAGACTAGATGCCCGACTG 59.691 60.000 0.00 0.00 0.00 3.51
296 297 1.448922 GCGAGACTAGATGCCCGACT 61.449 60.000 0.00 0.00 0.00 4.18
297 298 1.008309 GCGAGACTAGATGCCCGAC 60.008 63.158 0.00 0.00 0.00 4.79
298 299 2.194212 GGCGAGACTAGATGCCCGA 61.194 63.158 0.00 0.00 41.70 5.14
299 300 2.336809 GGCGAGACTAGATGCCCG 59.663 66.667 0.00 0.00 41.70 6.13
301 302 2.336809 CGGGCGAGACTAGATGCC 59.663 66.667 0.00 3.71 46.82 4.40
302 303 2.336809 CCGGGCGAGACTAGATGC 59.663 66.667 0.00 0.00 0.00 3.91
303 304 1.655329 GACCGGGCGAGACTAGATG 59.345 63.158 6.32 0.00 0.00 2.90
304 305 1.528776 GGACCGGGCGAGACTAGAT 60.529 63.158 6.32 0.00 0.00 1.98
305 306 2.124403 GGACCGGGCGAGACTAGA 60.124 66.667 6.32 0.00 0.00 2.43
306 307 2.124236 AGGACCGGGCGAGACTAG 60.124 66.667 6.32 0.00 0.00 2.57
307 308 2.124403 GAGGACCGGGCGAGACTA 60.124 66.667 6.32 0.00 0.00 2.59
318 319 4.035102 GTGGCAGTGGGGAGGACC 62.035 72.222 0.00 0.00 39.11 4.46
319 320 4.394712 CGTGGCAGTGGGGAGGAC 62.395 72.222 0.00 0.00 0.00 3.85
322 323 4.394712 GACCGTGGCAGTGGGGAG 62.395 72.222 10.22 0.00 0.00 4.30
324 325 4.263572 TTGACCGTGGCAGTGGGG 62.264 66.667 10.22 1.91 0.00 4.96
325 326 2.669569 CTTGACCGTGGCAGTGGG 60.670 66.667 10.22 4.33 0.00 4.61
326 327 1.227823 TTCTTGACCGTGGCAGTGG 60.228 57.895 4.22 4.22 0.00 4.00
327 328 1.230635 CCTTCTTGACCGTGGCAGTG 61.231 60.000 0.00 0.00 0.00 3.66
328 329 1.071471 CCTTCTTGACCGTGGCAGT 59.929 57.895 0.00 0.00 0.00 4.40
329 330 0.671781 CTCCTTCTTGACCGTGGCAG 60.672 60.000 0.00 0.00 0.00 4.85
330 331 1.371183 CTCCTTCTTGACCGTGGCA 59.629 57.895 0.00 0.00 0.00 4.92
331 332 1.376037 CCTCCTTCTTGACCGTGGC 60.376 63.158 0.00 0.00 0.00 5.01
332 333 1.376037 GCCTCCTTCTTGACCGTGG 60.376 63.158 0.00 0.00 0.00 4.94
333 334 1.376037 GGCCTCCTTCTTGACCGTG 60.376 63.158 0.00 0.00 0.00 4.94
334 335 0.252103 TAGGCCTCCTTCTTGACCGT 60.252 55.000 9.68 0.00 34.61 4.83
335 336 0.175989 GTAGGCCTCCTTCTTGACCG 59.824 60.000 9.68 0.00 34.61 4.79
336 337 1.276622 TGTAGGCCTCCTTCTTGACC 58.723 55.000 9.68 0.00 34.61 4.02
337 338 2.158885 GGATGTAGGCCTCCTTCTTGAC 60.159 54.545 9.68 0.00 34.61 3.18
338 339 2.119495 GGATGTAGGCCTCCTTCTTGA 58.881 52.381 9.68 0.00 34.61 3.02
339 340 1.141858 GGGATGTAGGCCTCCTTCTTG 59.858 57.143 9.68 0.00 34.61 3.02
340 341 1.512735 GGGATGTAGGCCTCCTTCTT 58.487 55.000 9.68 0.00 34.61 2.52
341 342 0.400670 GGGGATGTAGGCCTCCTTCT 60.401 60.000 9.68 0.00 34.61 2.85
342 343 1.759459 CGGGGATGTAGGCCTCCTTC 61.759 65.000 9.68 5.41 34.61 3.46
343 344 1.766461 CGGGGATGTAGGCCTCCTT 60.766 63.158 9.68 0.00 34.61 3.36
344 345 2.122813 CGGGGATGTAGGCCTCCT 60.123 66.667 9.68 0.00 37.71 3.69
345 346 3.942439 GCGGGGATGTAGGCCTCC 61.942 72.222 9.68 3.78 0.00 4.30
346 347 3.942439 GGCGGGGATGTAGGCCTC 61.942 72.222 9.68 1.02 42.29 4.70
350 351 2.854032 ATGGGGCGGGGATGTAGG 60.854 66.667 0.00 0.00 0.00 3.18
351 352 2.750350 GATGGGGCGGGGATGTAG 59.250 66.667 0.00 0.00 0.00 2.74
352 353 3.238497 CGATGGGGCGGGGATGTA 61.238 66.667 0.00 0.00 0.00 2.29
354 355 4.935495 CACGATGGGGCGGGGATG 62.935 72.222 0.00 0.00 35.12 3.51
364 365 4.415150 AGGTGCTGCCCACGATGG 62.415 66.667 9.36 0.00 45.62 3.51
365 366 2.821366 GAGGTGCTGCCCACGATG 60.821 66.667 9.36 0.00 45.62 3.84
366 367 4.101448 GGAGGTGCTGCCCACGAT 62.101 66.667 9.36 0.00 45.62 3.73
370 371 2.203922 TAGTGGAGGTGCTGCCCA 60.204 61.111 9.36 0.99 38.26 5.36
371 372 2.269241 GTAGTGGAGGTGCTGCCC 59.731 66.667 0.00 0.00 38.26 5.36
372 373 1.078848 CAGTAGTGGAGGTGCTGCC 60.079 63.158 0.00 0.00 37.58 4.85
373 374 1.743252 GCAGTAGTGGAGGTGCTGC 60.743 63.158 0.00 0.00 44.69 5.25
374 375 1.078848 GGCAGTAGTGGAGGTGCTG 60.079 63.158 0.00 0.00 36.15 4.41
375 376 1.229336 AGGCAGTAGTGGAGGTGCT 60.229 57.895 0.00 0.00 36.15 4.40
376 377 1.219393 GAGGCAGTAGTGGAGGTGC 59.781 63.158 0.00 0.00 35.07 5.01
377 378 0.976641 TTGAGGCAGTAGTGGAGGTG 59.023 55.000 0.00 0.00 0.00 4.00
378 379 1.625818 CTTTGAGGCAGTAGTGGAGGT 59.374 52.381 0.00 0.00 0.00 3.85
379 380 1.065854 CCTTTGAGGCAGTAGTGGAGG 60.066 57.143 0.00 0.00 0.00 4.30
380 381 1.065854 CCCTTTGAGGCAGTAGTGGAG 60.066 57.143 0.00 0.00 32.73 3.86
381 382 0.984230 CCCTTTGAGGCAGTAGTGGA 59.016 55.000 0.00 0.00 32.73 4.02
382 383 3.558674 CCCTTTGAGGCAGTAGTGG 57.441 57.895 0.00 0.00 32.73 4.00
391 392 2.045926 CAGTCGGGCCCTTTGAGG 60.046 66.667 22.43 2.32 34.30 3.86
392 393 0.323629 TAACAGTCGGGCCCTTTGAG 59.676 55.000 22.43 8.42 0.00 3.02
393 394 0.323629 CTAACAGTCGGGCCCTTTGA 59.676 55.000 22.43 7.05 0.00 2.69
394 395 0.036306 ACTAACAGTCGGGCCCTTTG 59.964 55.000 22.43 17.21 0.00 2.77
395 396 0.769247 AACTAACAGTCGGGCCCTTT 59.231 50.000 22.43 7.43 0.00 3.11
396 397 0.036306 CAACTAACAGTCGGGCCCTT 59.964 55.000 22.43 9.58 0.00 3.95
397 398 1.125711 ACAACTAACAGTCGGGCCCT 61.126 55.000 22.43 1.26 0.00 5.19
398 399 0.672711 GACAACTAACAGTCGGGCCC 60.673 60.000 13.57 13.57 0.00 5.80
399 400 0.672711 GGACAACTAACAGTCGGGCC 60.673 60.000 0.00 0.00 35.63 5.80
400 401 0.034337 TGGACAACTAACAGTCGGGC 59.966 55.000 0.00 0.00 35.63 6.13
401 402 1.337823 CCTGGACAACTAACAGTCGGG 60.338 57.143 0.00 0.00 35.63 5.14
402 403 1.616865 TCCTGGACAACTAACAGTCGG 59.383 52.381 0.00 0.00 35.63 4.79
403 404 2.927014 GCTCCTGGACAACTAACAGTCG 60.927 54.545 0.00 0.00 35.63 4.18
404 405 2.037251 TGCTCCTGGACAACTAACAGTC 59.963 50.000 0.00 0.00 0.00 3.51
405 406 2.047061 TGCTCCTGGACAACTAACAGT 58.953 47.619 0.00 0.00 0.00 3.55
406 407 2.839486 TGCTCCTGGACAACTAACAG 57.161 50.000 0.00 0.00 0.00 3.16
407 408 3.476552 CTTTGCTCCTGGACAACTAACA 58.523 45.455 10.06 0.00 0.00 2.41
408 409 2.226674 GCTTTGCTCCTGGACAACTAAC 59.773 50.000 10.06 0.46 0.00 2.34
409 410 2.504367 GCTTTGCTCCTGGACAACTAA 58.496 47.619 10.06 0.00 0.00 2.24
410 411 1.271379 GGCTTTGCTCCTGGACAACTA 60.271 52.381 10.06 0.00 0.00 2.24
411 412 0.538287 GGCTTTGCTCCTGGACAACT 60.538 55.000 10.06 0.00 0.00 3.16
412 413 1.856265 CGGCTTTGCTCCTGGACAAC 61.856 60.000 10.06 2.75 0.00 3.32
413 414 1.600636 CGGCTTTGCTCCTGGACAA 60.601 57.895 0.00 0.00 0.00 3.18
414 415 2.032528 CGGCTTTGCTCCTGGACA 59.967 61.111 0.00 0.00 0.00 4.02
415 416 1.743252 CTCGGCTTTGCTCCTGGAC 60.743 63.158 0.00 0.00 0.00 4.02
416 417 2.665000 CTCGGCTTTGCTCCTGGA 59.335 61.111 0.00 0.00 0.00 3.86
417 418 2.437359 CCTCGGCTTTGCTCCTGG 60.437 66.667 0.00 0.00 0.00 4.45
418 419 2.037136 CACCTCGGCTTTGCTCCTG 61.037 63.158 0.00 0.00 0.00 3.86
419 420 2.348998 CACCTCGGCTTTGCTCCT 59.651 61.111 0.00 0.00 0.00 3.69
420 421 2.747855 CCACCTCGGCTTTGCTCC 60.748 66.667 0.00 0.00 0.00 4.70
421 422 1.743252 CTCCACCTCGGCTTTGCTC 60.743 63.158 0.00 0.00 33.14 4.26
422 423 2.348998 CTCCACCTCGGCTTTGCT 59.651 61.111 0.00 0.00 33.14 3.91
423 424 2.747855 CCTCCACCTCGGCTTTGC 60.748 66.667 0.00 0.00 33.14 3.68
424 425 2.747855 GCCTCCACCTCGGCTTTG 60.748 66.667 0.00 0.00 42.98 2.77
425 426 4.394712 CGCCTCCACCTCGGCTTT 62.395 66.667 0.00 0.00 44.11 3.51
430 431 2.417516 CATACCGCCTCCACCTCG 59.582 66.667 0.00 0.00 0.00 4.63
431 432 2.109181 GCATACCGCCTCCACCTC 59.891 66.667 0.00 0.00 32.94 3.85
442 443 0.874607 CTCAACGCTACGGGCATACC 60.875 60.000 3.75 0.00 41.91 2.73
443 444 0.874607 CCTCAACGCTACGGGCATAC 60.875 60.000 3.75 0.00 41.91 2.39
444 445 1.324740 ACCTCAACGCTACGGGCATA 61.325 55.000 3.75 0.00 41.91 3.14
445 446 2.186903 CCTCAACGCTACGGGCAT 59.813 61.111 3.75 0.00 41.91 4.40
446 447 3.307906 ACCTCAACGCTACGGGCA 61.308 61.111 3.75 0.00 41.91 5.36
447 448 2.813908 CACCTCAACGCTACGGGC 60.814 66.667 0.00 0.00 37.64 6.13
448 449 2.125673 CCACCTCAACGCTACGGG 60.126 66.667 0.00 0.00 0.00 5.28
449 450 1.153823 CTCCACCTCAACGCTACGG 60.154 63.158 0.00 0.00 0.00 4.02
450 451 1.153823 CCTCCACCTCAACGCTACG 60.154 63.158 0.00 0.00 0.00 3.51
451 452 1.448013 GCCTCCACCTCAACGCTAC 60.448 63.158 0.00 0.00 0.00 3.58
452 453 2.978824 GCCTCCACCTCAACGCTA 59.021 61.111 0.00 0.00 0.00 4.26
453 454 4.379243 CGCCTCCACCTCAACGCT 62.379 66.667 0.00 0.00 0.00 5.07
455 456 1.956629 ATACCGCCTCCACCTCAACG 61.957 60.000 0.00 0.00 0.00 4.10
456 457 0.462047 CATACCGCCTCCACCTCAAC 60.462 60.000 0.00 0.00 0.00 3.18
457 458 1.904771 CATACCGCCTCCACCTCAA 59.095 57.895 0.00 0.00 0.00 3.02
458 459 2.731571 GCATACCGCCTCCACCTCA 61.732 63.158 0.00 0.00 32.94 3.86
459 460 2.109181 GCATACCGCCTCCACCTC 59.891 66.667 0.00 0.00 32.94 3.85
470 471 0.176449 ACTAAACGGACGGGCATACC 59.824 55.000 0.00 0.00 0.00 2.73
471 472 1.283736 CACTAAACGGACGGGCATAC 58.716 55.000 0.00 0.00 0.00 2.39
472 473 0.460635 GCACTAAACGGACGGGCATA 60.461 55.000 0.00 0.00 0.00 3.14
473 474 1.743995 GCACTAAACGGACGGGCAT 60.744 57.895 0.00 0.00 0.00 4.40
474 475 2.357760 GCACTAAACGGACGGGCA 60.358 61.111 0.00 0.00 0.00 5.36
475 476 3.122971 GGCACTAAACGGACGGGC 61.123 66.667 0.00 0.00 0.00 6.13
476 477 0.675522 AATGGCACTAAACGGACGGG 60.676 55.000 0.00 0.00 0.00 5.28
477 478 0.725117 GAATGGCACTAAACGGACGG 59.275 55.000 0.00 0.00 0.00 4.79
478 479 1.434555 TGAATGGCACTAAACGGACG 58.565 50.000 0.00 0.00 0.00 4.79
479 480 3.438781 TGAATGAATGGCACTAAACGGAC 59.561 43.478 0.00 0.00 0.00 4.79
480 481 3.680490 TGAATGAATGGCACTAAACGGA 58.320 40.909 0.00 0.00 0.00 4.69
481 482 4.637483 ATGAATGAATGGCACTAAACGG 57.363 40.909 0.00 0.00 0.00 4.44
482 483 6.092092 TCAAATGAATGAATGGCACTAAACG 58.908 36.000 0.00 0.00 0.00 3.60
483 484 7.760794 TCATCAAATGAATGAATGGCACTAAAC 59.239 33.333 0.00 0.00 36.11 2.01
484 485 7.838884 TCATCAAATGAATGAATGGCACTAAA 58.161 30.769 0.00 0.00 36.11 1.85
485 486 7.407393 TCATCAAATGAATGAATGGCACTAA 57.593 32.000 0.00 0.00 36.11 2.24
486 487 7.255695 GGATCATCAAATGAATGAATGGCACTA 60.256 37.037 0.00 0.00 43.50 2.74
487 488 5.925506 TCATCAAATGAATGAATGGCACT 57.074 34.783 0.00 0.00 36.11 4.40
488 489 5.694910 GGATCATCAAATGAATGAATGGCAC 59.305 40.000 0.00 0.00 43.50 5.01
489 490 5.508320 CGGATCATCAAATGAATGAATGGCA 60.508 40.000 0.00 0.00 43.50 4.92
490 491 4.921515 CGGATCATCAAATGAATGAATGGC 59.078 41.667 0.00 0.00 43.50 4.40
491 492 5.918576 CACGGATCATCAAATGAATGAATGG 59.081 40.000 0.00 0.00 43.50 3.16
492 493 6.500910 ACACGGATCATCAAATGAATGAATG 58.499 36.000 0.00 0.00 43.50 2.67
493 494 6.704289 ACACGGATCATCAAATGAATGAAT 57.296 33.333 0.00 0.00 43.50 2.57
494 495 6.150809 TCAACACGGATCATCAAATGAATGAA 59.849 34.615 0.00 0.00 43.50 2.57
495 496 5.647225 TCAACACGGATCATCAAATGAATGA 59.353 36.000 0.00 0.00 43.50 2.57
504 505 2.354704 GGAACCTCAACACGGATCATCA 60.355 50.000 0.00 0.00 0.00 3.07
525 526 8.263940 TCTAATTTGGTCACTCGATTTAAAGG 57.736 34.615 0.00 0.00 0.00 3.11
570 571 6.373216 CGATTTGGGAGTAAAATACACAGGAA 59.627 38.462 0.00 0.00 0.00 3.36
595 597 4.035102 ACGGGGGCTCTTTCCTGC 62.035 66.667 0.00 0.00 32.80 4.85
660 662 2.079020 GACGTGGAGTGTTCACCGGA 62.079 60.000 9.46 0.00 0.00 5.14
661 663 1.663702 GACGTGGAGTGTTCACCGG 60.664 63.158 0.00 0.00 0.00 5.28
662 664 0.939577 CAGACGTGGAGTGTTCACCG 60.940 60.000 0.00 0.00 0.00 4.94
663 665 0.387929 TCAGACGTGGAGTGTTCACC 59.612 55.000 0.00 0.00 0.00 4.02
706 712 4.742201 CGCGGAGTGAGGTGGGTG 62.742 72.222 0.00 0.00 43.07 4.61
748 760 3.839432 GAGAGGACGGGGGCGAAG 61.839 72.222 0.00 0.00 0.00 3.79
757 769 1.110442 AATGGAGCAGAGAGAGGACG 58.890 55.000 0.00 0.00 0.00 4.79
758 770 2.034053 CGTAATGGAGCAGAGAGAGGAC 59.966 54.545 0.00 0.00 0.00 3.85
762 774 1.063942 TCCCGTAATGGAGCAGAGAGA 60.064 52.381 0.00 0.00 42.00 3.10
764 776 1.860641 TTCCCGTAATGGAGCAGAGA 58.139 50.000 0.00 0.00 42.00 3.10
766 778 3.426787 TTTTTCCCGTAATGGAGCAGA 57.573 42.857 0.00 0.00 42.00 4.26
940 967 1.605712 GGAGCCTGGCGTGATATACAC 60.606 57.143 13.96 0.00 45.11 2.90
998 1026 2.765969 CTGCCCCCTGTTCCATGT 59.234 61.111 0.00 0.00 0.00 3.21
1186 1214 2.045242 GAACGGAGGCCCCTTTCC 60.045 66.667 14.78 8.16 37.25 3.13
1187 1215 1.377333 CTGAACGGAGGCCCCTTTC 60.377 63.158 17.41 17.41 41.96 2.62
1188 1216 2.757077 CTGAACGGAGGCCCCTTT 59.243 61.111 0.00 0.00 0.00 3.11
1189 1217 3.330720 CCTGAACGGAGGCCCCTT 61.331 66.667 0.00 0.00 33.16 3.95
1192 1220 2.680370 ATTCCCTGAACGGAGGCCC 61.680 63.158 0.00 0.00 32.13 5.80
1193 1221 1.452108 CATTCCCTGAACGGAGGCC 60.452 63.158 0.00 0.00 32.13 5.19
1194 1222 2.115291 GCATTCCCTGAACGGAGGC 61.115 63.158 0.00 0.00 32.13 4.70
1204 1232 1.312815 GAAGCGCATTAGCATTCCCT 58.687 50.000 11.47 0.00 42.27 4.20
1246 1274 2.491897 GCGTTTGGGGGTTTTCGGT 61.492 57.895 0.00 0.00 0.00 4.69
1249 1277 2.355363 GCGCGTTTGGGGGTTTTC 60.355 61.111 8.43 0.00 0.00 2.29
1251 1279 4.906537 AGGCGCGTTTGGGGGTTT 62.907 61.111 8.43 0.00 0.00 3.27
1255 1283 1.238625 TAAAGAAGGCGCGTTTGGGG 61.239 55.000 17.42 0.00 0.00 4.96
1262 1290 1.521423 CCTACGATTAAAGAAGGCGCG 59.479 52.381 0.00 0.00 0.00 6.86
1344 1394 2.100879 AACTCTGCACAGACCGACCC 62.101 60.000 0.00 0.00 33.22 4.46
1356 1406 3.728845 TCCTACACAAGTTCAACTCTGC 58.271 45.455 0.00 0.00 0.00 4.26
1357 1407 3.743396 GCTCCTACACAAGTTCAACTCTG 59.257 47.826 0.00 0.00 0.00 3.35
1358 1408 3.244249 GGCTCCTACACAAGTTCAACTCT 60.244 47.826 0.00 0.00 0.00 3.24
1371 1437 0.179015 TTTTTGGCACGGCTCCTACA 60.179 50.000 0.00 0.00 0.00 2.74
1386 1452 7.401955 TGCATTGAAAGTTTCCCAAATTTTT 57.598 28.000 13.01 0.00 31.55 1.94
1430 1553 4.923871 ACTAACATGACTAGAACAGTTGCG 59.076 41.667 0.00 0.00 37.72 4.85
1485 1608 1.458827 GCGCTTCTCTGAGTTGACAAG 59.541 52.381 0.00 1.91 0.00 3.16
1493 1616 2.200067 CAGGTAATGCGCTTCTCTGAG 58.800 52.381 9.73 0.00 0.00 3.35
1544 1667 3.951775 AGAAAGACAGACGAGAAGCAT 57.048 42.857 0.00 0.00 0.00 3.79
1547 1670 6.146184 TGCAATAAAGAAAGACAGACGAGAAG 59.854 38.462 0.00 0.00 0.00 2.85
1553 1676 6.385033 AGCATTGCAATAAAGAAAGACAGAC 58.615 36.000 12.53 0.00 0.00 3.51
1592 1722 0.685097 ACCATAGTTCACCAGCACGT 59.315 50.000 0.00 0.00 0.00 4.49
1593 1723 2.268298 GTACCATAGTTCACCAGCACG 58.732 52.381 0.00 0.00 0.00 5.34
1594 1724 2.027561 TGGTACCATAGTTCACCAGCAC 60.028 50.000 11.60 0.00 36.15 4.40
1610 1740 8.460831 AATAAACATTTCGAGCATTTTGGTAC 57.539 30.769 0.00 0.00 0.00 3.34
1623 1753 5.059221 GTCCGCAGTGAAAATAAACATTTCG 59.941 40.000 0.00 0.00 39.17 3.46
1624 1754 5.918011 TGTCCGCAGTGAAAATAAACATTTC 59.082 36.000 0.00 0.00 37.31 2.17
1730 1868 8.243426 GGAAATCACAACTGAATACTGCAAATA 58.757 33.333 0.00 0.00 0.00 1.40
1731 1869 7.092716 GGAAATCACAACTGAATACTGCAAAT 58.907 34.615 0.00 0.00 0.00 2.32
1775 1913 2.550180 GTGGTCTTCAGGTTTTCTCAGC 59.450 50.000 0.00 0.00 0.00 4.26
1827 1965 7.745620 AAGAACAAAGAAACCACCTATACAG 57.254 36.000 0.00 0.00 0.00 2.74
1885 2023 0.321564 CCAGCGACACCCATTTCTCA 60.322 55.000 0.00 0.00 0.00 3.27
2132 2270 8.000780 AGGTTCTTTGGATAAATCAGCATAAC 57.999 34.615 0.00 0.00 0.00 1.89
2224 2362 7.941238 AGAGAAACTGAAAAGAGGATTCAATCA 59.059 33.333 0.00 0.00 36.43 2.57
2413 2551 5.671493 TGAAGGCTTAAGCAGAGTTATACC 58.329 41.667 27.83 7.30 44.36 2.73
2498 2636 8.924511 ATGAACCATTATATCCAGTTAGGTTG 57.075 34.615 0.00 0.00 38.16 3.77
2544 2682 0.666913 CTGCATGCTGGCATAAGGTC 59.333 55.000 20.33 0.00 43.97 3.85
2567 2708 5.683681 TGCAGATCAACACATGGTATACAT 58.316 37.500 5.01 0.00 41.57 2.29
2568 2709 5.096443 TGCAGATCAACACATGGTATACA 57.904 39.130 5.01 0.00 0.00 2.29
2569 2710 6.038603 ACAATGCAGATCAACACATGGTATAC 59.961 38.462 0.00 0.00 0.00 1.47
2570 2711 6.121590 ACAATGCAGATCAACACATGGTATA 58.878 36.000 0.00 0.00 0.00 1.47
2571 2712 4.951715 ACAATGCAGATCAACACATGGTAT 59.048 37.500 0.00 0.00 0.00 2.73
2573 2714 3.159472 ACAATGCAGATCAACACATGGT 58.841 40.909 0.00 0.00 0.00 3.55
2574 2715 3.861276 ACAATGCAGATCAACACATGG 57.139 42.857 0.00 0.00 0.00 3.66
2575 2716 6.557110 TCAATACAATGCAGATCAACACATG 58.443 36.000 0.00 0.00 0.00 3.21
2593 2734 9.178758 AGTTTCTTGGTTGGAGAATATCAATAC 57.821 33.333 0.00 0.00 33.48 1.89
2642 2783 2.310779 TGGAGTCTTGCCTCTACTGT 57.689 50.000 0.00 0.00 0.00 3.55
2648 2789 5.599999 TTCTACTAATGGAGTCTTGCCTC 57.400 43.478 0.00 0.00 39.81 4.70
2925 3102 1.009829 CTCGCCGCTTCTGCTTTAAT 58.990 50.000 0.00 0.00 36.97 1.40
3195 3372 8.169268 CGGATGTGAAAAAGAGTGTATAAACTC 58.831 37.037 14.39 14.39 45.82 3.01
3205 3382 5.152623 TGATCTCGGATGTGAAAAAGAGT 57.847 39.130 0.00 0.00 0.00 3.24
3213 3390 4.535526 TGAAAGTTGATCTCGGATGTGA 57.464 40.909 0.00 0.00 0.00 3.58
3220 3397 3.070018 ACTGCCTTGAAAGTTGATCTCG 58.930 45.455 0.00 0.00 0.00 4.04
3265 3442 9.646522 ATGATTTAGGCCTAATCTACAAAATGT 57.353 29.630 25.70 4.43 0.00 2.71
3278 3455 8.938883 ACAGAAGAAGAATATGATTTAGGCCTA 58.061 33.333 8.91 8.91 0.00 3.93
3333 3510 3.494332 AGGAAGAAGAAAGCAGCATGTT 58.506 40.909 0.00 0.00 39.31 2.71
3390 3568 8.178313 CCTAAAGCACTAAATAGAGCAAAGAAC 58.822 37.037 11.52 0.00 41.47 3.01
3411 3589 9.198475 TCTTTTGGTAAACCATTGTTACCTAAA 57.802 29.630 16.97 16.97 46.97 1.85
3412 3590 8.763984 TCTTTTGGTAAACCATTGTTACCTAA 57.236 30.769 14.10 11.09 46.97 2.69
3413 3591 8.763984 TTCTTTTGGTAAACCATTGTTACCTA 57.236 30.769 14.10 6.89 46.97 3.08
3414 3592 7.562088 TCTTCTTTTGGTAAACCATTGTTACCT 59.438 33.333 14.10 0.00 46.97 3.08
3465 3643 1.742761 CCTGTGTCGCCATCTTTGAT 58.257 50.000 0.00 0.00 0.00 2.57
3477 3655 1.338020 CCCAAAAGTTCTGCCTGTGTC 59.662 52.381 0.00 0.00 0.00 3.67
3541 3719 6.976934 AAGTATTCACTGGGTGTTCAAATT 57.023 33.333 0.00 0.00 34.36 1.82
3544 3722 7.558444 AGTTTAAAGTATTCACTGGGTGTTCAA 59.442 33.333 0.00 0.00 34.36 2.69
3545 3723 7.057894 AGTTTAAAGTATTCACTGGGTGTTCA 58.942 34.615 0.00 0.00 34.36 3.18
3577 3755 7.775120 AGAAATCCAATGATAATGGTTGACAC 58.225 34.615 0.00 0.00 39.09 3.67
3581 3759 9.918630 GGATAAGAAATCCAATGATAATGGTTG 57.081 33.333 0.00 0.00 39.09 3.77
3585 3763 9.021807 AGCTGGATAAGAAATCCAATGATAATG 57.978 33.333 8.03 0.00 46.50 1.90
3603 3781 5.744171 TGCAGTTTTAGATGAAGCTGGATA 58.256 37.500 0.00 0.00 38.03 2.59
3606 3784 3.128242 CCTGCAGTTTTAGATGAAGCTGG 59.872 47.826 13.81 0.00 38.03 4.85
3610 3788 3.084039 TGGCCTGCAGTTTTAGATGAAG 58.916 45.455 13.81 0.00 0.00 3.02
3614 3792 1.341383 CCCTGGCCTGCAGTTTTAGAT 60.341 52.381 13.81 0.00 0.00 1.98
3630 3808 4.040952 AGGCTAGAATTATGCACTACCCTG 59.959 45.833 0.00 0.00 0.00 4.45
3634 3812 5.215252 TCCAGGCTAGAATTATGCACTAC 57.785 43.478 0.00 0.00 0.00 2.73
3665 3843 5.392811 GCTTCTTCTGCAGCATGTTTTATCT 60.393 40.000 9.47 0.00 39.31 1.98
3678 3856 1.971481 TTGCTCTTGCTTCTTCTGCA 58.029 45.000 0.00 0.00 40.48 4.41
3685 3863 1.373570 ACCGCTATTGCTCTTGCTTC 58.626 50.000 0.00 0.00 40.48 3.86
3691 3869 6.318648 TCATTATTTGAAACCGCTATTGCTCT 59.681 34.615 0.00 0.00 36.97 4.09
3721 3899 3.001414 CTGAGCAAGTCATCTCACCAAG 58.999 50.000 0.00 0.00 35.66 3.61
3817 3997 4.095932 TCAGAGTGAGAAAATGCATGCATC 59.904 41.667 32.25 21.32 35.31 3.91
3821 4001 5.391449 CAGTTCAGAGTGAGAAAATGCATG 58.609 41.667 0.00 0.00 0.00 4.06
3862 4042 5.897377 ATATAACTGGCAAACAAGGTGAC 57.103 39.130 0.00 0.00 0.00 3.67
3883 4063 1.076485 GCAGGGGTGAGCCATGAAT 60.076 57.895 20.37 0.00 36.17 2.57
3939 4119 5.014123 TCCAAGGGATGAAGAAGTAACACAT 59.986 40.000 0.00 0.00 0.00 3.21
4017 4197 2.594303 CCACGCCAACCAAGCTGA 60.594 61.111 0.00 0.00 0.00 4.26
4059 4239 3.596101 ACTGGGCAAGGATGATCTATCT 58.404 45.455 0.00 0.00 36.03 1.98
4101 4281 1.729517 GAGCTTTCCGAAGTGCTCTTC 59.270 52.381 21.24 16.77 45.78 2.87
4105 4285 0.108585 TTGGAGCTTTCCGAAGTGCT 59.891 50.000 9.54 9.54 38.59 4.40
4112 4292 1.089920 CAGTGGATTGGAGCTTTCCG 58.910 55.000 0.00 0.00 31.90 4.30
4118 4298 1.831580 AGAAAGCAGTGGATTGGAGC 58.168 50.000 0.00 0.00 0.00 4.70
4125 4305 8.415950 TTTGGAAAATATTAGAAAGCAGTGGA 57.584 30.769 0.00 0.00 0.00 4.02
4157 4337 2.422597 CATTTGCAGAGTGGAACCGTA 58.577 47.619 0.00 0.00 37.80 4.02
4160 4340 1.909700 TCCATTTGCAGAGTGGAACC 58.090 50.000 12.66 0.00 38.99 3.62
4176 4356 6.418101 CACCTCCAAAGAATCTAATCTTCCA 58.582 40.000 0.00 0.00 38.69 3.53
4192 4372 2.304761 GTGACATTAGGTCCACCTCCAA 59.695 50.000 0.09 0.00 44.77 3.53
4193 4373 1.906574 GTGACATTAGGTCCACCTCCA 59.093 52.381 0.09 0.00 44.77 3.86
4206 4386 1.466167 GCATCTGCTGTTCGTGACATT 59.534 47.619 0.00 0.00 37.69 2.71
4213 4393 1.150827 TTCAGTGCATCTGCTGTTCG 58.849 50.000 10.36 0.00 43.32 3.95
4217 4397 2.929960 CACTTTTCAGTGCATCTGCTG 58.070 47.619 10.36 3.93 44.16 4.41
4228 4408 7.195646 TCAGCATTTTCTTGTACACTTTTCAG 58.804 34.615 0.00 0.00 0.00 3.02
4362 4542 4.094887 TGCTCCGAGTTATTCAAAATGAGC 59.905 41.667 0.00 0.00 42.19 4.26
4440 4620 1.667724 GTGGAAGTGATTGCCTCATCG 59.332 52.381 0.00 0.00 35.97 3.84
4470 4650 5.219343 TGTCTTCATCAGAAAGAGAGCAA 57.781 39.130 0.00 0.00 31.28 3.91
4596 4776 3.909137 CGAGAAAACTCGCAGAACG 57.091 52.632 6.70 0.00 45.62 3.95
4701 4881 4.161565 ACGTGCTTATTAGATGGACAAGGA 59.838 41.667 0.00 0.00 0.00 3.36
4711 4891 4.989044 TCGATGTTCACGTGCTTATTAGA 58.011 39.130 11.67 2.03 0.00 2.10
4766 4946 2.450160 CCACAGAAGACGTTTTTGTGC 58.550 47.619 19.33 0.00 38.19 4.57
4773 4953 0.613777 GGGATCCCACAGAAGACGTT 59.386 55.000 26.95 0.00 35.81 3.99
4776 4956 1.153349 GCGGGATCCCACAGAAGAC 60.153 63.158 30.42 5.08 35.37 3.01
4803 4983 3.309296 GTCCCTGGACATAGGAGAATCA 58.691 50.000 11.45 0.00 44.02 2.57
4833 5013 2.224450 ACTCCCCTTCAAGTGTTTACCG 60.224 50.000 0.00 0.00 0.00 4.02
4902 5082 1.630148 CGCTTACCTTCGGAGTCTTG 58.370 55.000 0.00 0.00 0.00 3.02
4944 5124 6.044682 GGAATGTAATGCAAAGGAATCCTTG 58.955 40.000 16.25 10.72 43.92 3.61
4969 5149 4.927422 TGAGTGGACGAAAAATTTCCAAC 58.073 39.130 0.00 0.00 41.15 3.77
4971 5151 5.584253 TTTGAGTGGACGAAAAATTTCCA 57.416 34.783 0.00 0.00 37.07 3.53
4976 5156 6.127730 ACAAGAGTTTTGAGTGGACGAAAAAT 60.128 34.615 0.00 0.00 0.00 1.82
4983 5163 6.679327 ACTTTACAAGAGTTTTGAGTGGAC 57.321 37.500 0.00 0.00 0.00 4.02
5006 5186 4.464951 TCGCTACCACAGGAAAAGAAGATA 59.535 41.667 0.00 0.00 0.00 1.98
5414 5624 5.316987 ACAGCCCCAAAGTATAATATGCTC 58.683 41.667 0.00 0.00 0.00 4.26
5426 5636 3.703001 TTAGAGAAGACAGCCCCAAAG 57.297 47.619 0.00 0.00 0.00 2.77
5479 5691 1.147473 GGCAACCTTTCGGCAAAATG 58.853 50.000 0.00 0.00 0.00 2.32
5537 5749 4.253685 ACCTCATAAACATGAACCAGACG 58.746 43.478 0.00 0.00 0.00 4.18
5539 5751 5.705441 GTCAACCTCATAAACATGAACCAGA 59.295 40.000 0.00 0.00 0.00 3.86
5551 5763 5.883115 TGTCAAACACAAGTCAACCTCATAA 59.117 36.000 0.00 0.00 29.30 1.90
5573 5785 5.796424 AAGTCCAGCATTCTTTTCATTGT 57.204 34.783 0.00 0.00 0.00 2.71
5578 5790 7.390718 TCCTAACTTAAGTCCAGCATTCTTTTC 59.609 37.037 8.95 0.00 0.00 2.29
5583 5795 7.631717 AATTCCTAACTTAAGTCCAGCATTC 57.368 36.000 8.95 0.00 0.00 2.67
5591 5803 8.562052 TCAAAACCGAAATTCCTAACTTAAGTC 58.438 33.333 8.95 0.00 0.00 3.01
5610 5822 6.530019 ACATCAACCTATTGGATCAAAACC 57.470 37.500 0.00 0.00 36.39 3.27
5614 5826 4.080582 ACCGACATCAACCTATTGGATCAA 60.081 41.667 0.00 0.00 36.39 2.57
5619 5831 2.170607 AGGACCGACATCAACCTATTGG 59.829 50.000 0.00 0.00 36.39 3.16
5636 5848 3.340814 TCTCCTTGAGCAATTCAGGAC 57.659 47.619 0.00 0.00 37.07 3.85
5675 5887 5.375417 TCTAATCACGTCGGTCTTAAACA 57.625 39.130 0.00 0.00 0.00 2.83
5694 5906 9.130661 TGAAAATTGTTCTCCTGACAAAATCTA 57.869 29.630 0.00 0.00 0.00 1.98
5742 5954 2.244436 CTGCCGCCATGTTGTTCTCG 62.244 60.000 0.00 0.00 0.00 4.04
5812 6024 4.215185 AGCTGCTTGAGAAAAAGAGCTTAC 59.785 41.667 0.00 0.00 37.36 2.34
5813 6025 4.392940 AGCTGCTTGAGAAAAAGAGCTTA 58.607 39.130 0.00 0.00 37.36 3.09
6045 6258 5.785423 AGATCAGGAAATTGGGTATCGGATA 59.215 40.000 0.00 0.00 0.00 2.59
6049 6262 6.699575 AAAAGATCAGGAAATTGGGTATCG 57.300 37.500 0.00 0.00 0.00 2.92
6157 6377 1.968704 ATCTGCACGAGATAGGACGA 58.031 50.000 0.00 0.00 39.88 4.20
6161 6381 4.837896 TCACTAATCTGCACGAGATAGG 57.162 45.455 0.00 0.00 40.89 2.57
6453 6692 0.706729 CGCGTCGGTGTACTTTCTTC 59.293 55.000 0.00 0.00 0.00 2.87
6507 6746 1.675801 CAGCTTCCTGTCCAGAGCA 59.324 57.895 9.74 0.00 37.59 4.26
6518 6757 3.741476 CCTTGCCGTGCAGCTTCC 61.741 66.667 0.00 0.00 40.61 3.46
6814 7053 1.602377 GTACAAGTGTGCCAACCTGTC 59.398 52.381 0.00 0.00 0.00 3.51
6851 7090 2.381752 AAAGTTGGGTTCCTCTTGGG 57.618 50.000 0.00 0.00 0.00 4.12
6868 7107 3.975312 TCACACTCCCTGTACCCTAAAAA 59.025 43.478 0.00 0.00 0.00 1.94
6869 7108 3.325716 GTCACACTCCCTGTACCCTAAAA 59.674 47.826 0.00 0.00 0.00 1.52
6877 7116 1.147191 ACCTGAGTCACACTCCCTGTA 59.853 52.381 1.23 0.00 44.44 2.74
6888 7127 7.676004 TCTTGTTTGATATTACACCTGAGTCA 58.324 34.615 0.00 0.00 0.00 3.41
6905 7149 7.593875 TGAAACCTGAACATTTTCTTGTTTG 57.406 32.000 13.24 0.00 39.85 2.93
6906 7150 7.877612 ACTTGAAACCTGAACATTTTCTTGTTT 59.122 29.630 10.03 10.03 39.85 2.83
6907 7151 7.331687 CACTTGAAACCTGAACATTTTCTTGTT 59.668 33.333 0.00 0.00 42.37 2.83
6909 7153 6.237915 GCACTTGAAACCTGAACATTTTCTTG 60.238 38.462 0.00 0.00 32.36 3.02
6911 7155 5.105392 TGCACTTGAAACCTGAACATTTTCT 60.105 36.000 0.00 0.00 32.36 2.52
6912 7156 5.108517 TGCACTTGAAACCTGAACATTTTC 58.891 37.500 0.00 0.00 0.00 2.29
6923 7168 1.135141 TGTGTGCTTGCACTTGAAACC 60.135 47.619 23.53 6.40 39.89 3.27
6939 7184 1.810151 CCGAATCCCGAACATTTGTGT 59.190 47.619 0.00 0.00 41.76 3.72
6975 7220 8.461222 TCCAATGCTTTCTGTATTCTGTATTTG 58.539 33.333 0.00 0.00 0.00 2.32
6980 7225 6.899393 TTTCCAATGCTTTCTGTATTCTGT 57.101 33.333 0.00 0.00 0.00 3.41
6981 7226 7.652909 TGTTTTTCCAATGCTTTCTGTATTCTG 59.347 33.333 0.00 0.00 0.00 3.02
6982 7227 7.725251 TGTTTTTCCAATGCTTTCTGTATTCT 58.275 30.769 0.00 0.00 0.00 2.40
6983 7228 7.945033 TGTTTTTCCAATGCTTTCTGTATTC 57.055 32.000 0.00 0.00 0.00 1.75
6985 7230 7.444299 ACATGTTTTTCCAATGCTTTCTGTAT 58.556 30.769 0.00 0.00 0.00 2.29
7068 7314 4.636206 GTCCTCCACTAGCAACCTTAATTG 59.364 45.833 0.00 0.00 0.00 2.32
7194 7626 4.286320 ATGGAGCGGCCGATCGTC 62.286 66.667 34.48 23.15 40.66 4.20
7404 7836 1.515736 CTTCGGGTTCGGCTACGTC 60.516 63.158 0.00 0.00 41.85 4.34
7482 7914 0.589708 TCCACGAGATATACACCGCG 59.410 55.000 0.00 0.00 0.00 6.46
7546 7978 2.665089 CGGCAGATGGTGGTGGGTA 61.665 63.158 0.00 0.00 0.00 3.69
7547 7979 4.033776 CGGCAGATGGTGGTGGGT 62.034 66.667 0.00 0.00 0.00 4.51
7587 8019 1.511305 CTTACTCTTCCTCGCGGCA 59.489 57.895 6.13 0.00 0.00 5.69
7643 8075 2.467826 GCTCCTCATCGTGCAAGCC 61.468 63.158 0.00 0.00 0.00 4.35
7673 8105 0.175302 CACATCTCTGCTTCTCGGCT 59.825 55.000 0.00 0.00 0.00 5.52
7676 8108 1.203287 TCACCACATCTCTGCTTCTCG 59.797 52.381 0.00 0.00 0.00 4.04
7677 8109 3.540314 ATCACCACATCTCTGCTTCTC 57.460 47.619 0.00 0.00 0.00 2.87
7678 8110 5.426504 CTTTATCACCACATCTCTGCTTCT 58.573 41.667 0.00 0.00 0.00 2.85
7679 8111 4.034975 GCTTTATCACCACATCTCTGCTTC 59.965 45.833 0.00 0.00 0.00 3.86
7680 8112 3.944015 GCTTTATCACCACATCTCTGCTT 59.056 43.478 0.00 0.00 0.00 3.91
7681 8113 3.199508 AGCTTTATCACCACATCTCTGCT 59.800 43.478 0.00 0.00 0.00 4.24
7682 8114 3.311871 CAGCTTTATCACCACATCTCTGC 59.688 47.826 0.00 0.00 0.00 4.26
7683 8115 3.875727 CCAGCTTTATCACCACATCTCTG 59.124 47.826 0.00 0.00 0.00 3.35
7684 8116 3.118112 CCCAGCTTTATCACCACATCTCT 60.118 47.826 0.00 0.00 0.00 3.10
7685 8117 3.209410 CCCAGCTTTATCACCACATCTC 58.791 50.000 0.00 0.00 0.00 2.75
7721 8160 5.676552 ACAACTACAAGAACACACACCATA 58.323 37.500 0.00 0.00 0.00 2.74
7751 8190 2.490509 CAATCATCCAAGCTGCTGTTCA 59.509 45.455 1.35 0.00 0.00 3.18
7757 8196 2.089980 ACAGACAATCATCCAAGCTGC 58.910 47.619 0.00 0.00 0.00 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.