Multiple sequence alignment - TraesCS1B01G273700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G273700 chr1B 100.000 2546 0 0 1 2546 480827742 480825197 0.000000e+00 4702.0
1 TraesCS1B01G273700 chr1B 96.907 194 6 0 2353 2546 670231372 670231565 2.440000e-85 326.0
2 TraesCS1B01G273700 chr1B 95.588 68 3 0 1709 1776 480825966 480825899 2.680000e-20 110.0
3 TraesCS1B01G273700 chr1B 95.588 68 3 0 1777 1844 480826034 480825967 2.680000e-20 110.0
4 TraesCS1B01G273700 chr1A 89.948 1144 71 23 454 1577 458511568 458510449 0.000000e+00 1435.0
5 TraesCS1B01G273700 chr1A 94.330 194 11 0 2353 2546 344133964 344133771 5.330000e-77 298.0
6 TraesCS1B01G273700 chr1A 100.000 28 0 0 456 483 458512598 458512571 5.000000e-03 52.8
7 TraesCS1B01G273700 chr1D 88.983 1062 70 20 751 1776 357438704 357437654 0.000000e+00 1269.0
8 TraesCS1B01G273700 chr1D 90.444 586 47 2 1777 2353 357437721 357437136 0.000000e+00 763.0
9 TraesCS1B01G273700 chr1D 94.490 363 10 4 342 699 357439474 357439117 3.700000e-153 551.0
10 TraesCS1B01G273700 chr1D 90.530 264 25 0 1 264 44259107 44258844 1.450000e-92 350.0
11 TraesCS1B01G273700 chr7A 89.773 264 27 0 1 264 712433000 712432737 3.140000e-89 339.0
12 TraesCS1B01G273700 chr7A 96.907 194 6 0 2353 2546 712841322 712841515 2.440000e-85 326.0
13 TraesCS1B01G273700 chr7A 90.206 194 19 0 2353 2546 477398054 477397861 1.170000e-63 254.0
14 TraesCS1B01G273700 chr7B 97.938 194 4 0 2353 2546 113569252 113569445 1.130000e-88 337.0
15 TraesCS1B01G273700 chr4A 97.382 191 5 0 2356 2546 168926179 168925989 2.440000e-85 326.0
16 TraesCS1B01G273700 chr3A 96.907 194 6 0 2353 2546 738104138 738103945 2.440000e-85 326.0
17 TraesCS1B01G273700 chr3A 81.058 359 34 18 1007 1343 649541237 649540891 3.250000e-64 255.0
18 TraesCS1B01G273700 chr2A 95.876 194 8 0 2353 2546 19117471 19117664 5.290000e-82 315.0
19 TraesCS1B01G273700 chr2A 95.361 194 9 0 2353 2546 349737011 349736818 2.460000e-80 309.0
20 TraesCS1B01G273700 chr3B 83.828 303 28 12 1053 1343 676944476 676944183 4.180000e-68 268.0
21 TraesCS1B01G273700 chr3D 80.712 337 33 15 1048 1361 514651913 514651586 1.520000e-57 233.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G273700 chr1B 480825197 480827742 2545 True 1640.666667 4702 97.058667 1 2546 3 chr1B.!!$R1 2545
1 TraesCS1B01G273700 chr1A 458510449 458512598 2149 True 743.900000 1435 94.974000 454 1577 2 chr1A.!!$R2 1123
2 TraesCS1B01G273700 chr1D 357437136 357439474 2338 True 861.000000 1269 91.305667 342 2353 3 chr1D.!!$R2 2011

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
45 46 0.030235 GTTCAAACCACGCCCTGAAC 59.970 55.0 0.00 0.0 40.46 3.18 F
103 104 0.178950 AGGATGGAGGCGATCTGCTA 60.179 55.0 8.94 0.0 45.43 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1443 2421 0.322816 AGCTCCTCGTACCACCGTAA 60.323 55.000 0.0 0.0 0.00 3.18 R
1975 2964 1.393883 GTTTTCTCGAATCCGCTCACC 59.606 52.381 0.0 0.0 35.37 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.060038 CCGAGGCCCGTACACGTT 62.060 66.667 0.00 0.00 37.74 3.99
30 31 2.652530 GAGGCCCGTACACGTTCA 59.347 61.111 0.00 0.00 37.74 3.18
32 33 0.600782 GAGGCCCGTACACGTTCAAA 60.601 55.000 0.00 0.00 37.74 2.69
33 34 0.881600 AGGCCCGTACACGTTCAAAC 60.882 55.000 0.00 0.00 37.74 2.93
34 35 1.570967 GCCCGTACACGTTCAAACC 59.429 57.895 0.58 0.00 37.74 3.27
35 36 1.159098 GCCCGTACACGTTCAAACCA 61.159 55.000 0.58 0.00 37.74 3.67
37 38 0.230260 CCGTACACGTTCAAACCACG 59.770 55.000 0.58 0.00 43.52 4.94
39 40 0.041926 GTACACGTTCAAACCACGCC 60.042 55.000 0.00 0.00 41.53 5.68
40 41 1.159098 TACACGTTCAAACCACGCCC 61.159 55.000 0.00 0.00 41.53 6.13
42 43 2.184167 ACGTTCAAACCACGCCCTG 61.184 57.895 0.00 0.00 41.53 4.45
43 44 1.890041 CGTTCAAACCACGCCCTGA 60.890 57.895 0.00 0.00 0.00 3.86
44 45 1.440938 CGTTCAAACCACGCCCTGAA 61.441 55.000 0.00 0.00 0.00 3.02
45 46 0.030235 GTTCAAACCACGCCCTGAAC 59.970 55.000 0.00 0.00 40.46 3.18
46 47 1.104577 TTCAAACCACGCCCTGAACC 61.105 55.000 0.00 0.00 0.00 3.62
48 49 1.106944 CAAACCACGCCCTGAACCTT 61.107 55.000 0.00 0.00 0.00 3.50
49 50 1.106944 AAACCACGCCCTGAACCTTG 61.107 55.000 0.00 0.00 0.00 3.61
50 51 3.365265 CCACGCCCTGAACCTTGC 61.365 66.667 0.00 0.00 0.00 4.01
51 52 3.365265 CACGCCCTGAACCTTGCC 61.365 66.667 0.00 0.00 0.00 4.52
60 61 4.643387 AACCTTGCCGCCGCTCTT 62.643 61.111 0.00 0.00 35.36 2.85
62 63 2.435938 CCTTGCCGCCGCTCTTAA 60.436 61.111 0.00 0.00 35.36 1.85
63 64 2.038269 CCTTGCCGCCGCTCTTAAA 61.038 57.895 0.00 0.00 35.36 1.52
64 65 1.134694 CTTGCCGCCGCTCTTAAAC 59.865 57.895 0.00 0.00 35.36 2.01
65 66 2.563086 CTTGCCGCCGCTCTTAAACG 62.563 60.000 0.00 0.00 35.36 3.60
71 72 2.687436 CGCTCTTAAACGGACGCG 59.313 61.111 3.53 3.53 34.50 6.01
73 74 1.138047 CGCTCTTAAACGGACGCGAT 61.138 55.000 15.93 0.00 42.82 4.58
74 75 0.571197 GCTCTTAAACGGACGCGATC 59.429 55.000 15.93 6.63 0.00 3.69
75 76 1.197910 CTCTTAAACGGACGCGATCC 58.802 55.000 15.93 15.43 45.20 3.36
86 87 3.861569 GACGCGATCCAATCTTAAAGG 57.138 47.619 15.93 0.00 0.00 3.11
87 88 3.454375 GACGCGATCCAATCTTAAAGGA 58.546 45.455 15.93 0.00 35.59 3.36
88 89 4.058817 GACGCGATCCAATCTTAAAGGAT 58.941 43.478 15.93 0.00 44.53 3.24
89 90 3.809832 ACGCGATCCAATCTTAAAGGATG 59.190 43.478 15.93 0.00 42.03 3.51
92 93 4.453819 GCGATCCAATCTTAAAGGATGGAG 59.546 45.833 6.84 0.10 42.03 3.86
93 94 4.999950 CGATCCAATCTTAAAGGATGGAGG 59.000 45.833 9.00 4.27 42.03 4.30
94 95 4.170468 TCCAATCTTAAAGGATGGAGGC 57.830 45.455 0.53 0.00 0.00 4.70
95 96 2.880890 CCAATCTTAAAGGATGGAGGCG 59.119 50.000 0.00 0.00 0.00 5.52
96 97 3.433598 CCAATCTTAAAGGATGGAGGCGA 60.434 47.826 0.00 0.00 0.00 5.54
98 99 3.753294 TCTTAAAGGATGGAGGCGATC 57.247 47.619 0.00 0.00 0.00 3.69
100 101 3.070159 TCTTAAAGGATGGAGGCGATCTG 59.930 47.826 0.00 0.00 0.00 2.90
101 102 0.179034 AAAGGATGGAGGCGATCTGC 60.179 55.000 0.00 1.55 45.38 4.26
102 103 1.053264 AAGGATGGAGGCGATCTGCT 61.053 55.000 8.94 0.00 45.43 4.24
103 104 0.178950 AGGATGGAGGCGATCTGCTA 60.179 55.000 8.94 0.00 45.43 3.49
104 105 0.901124 GGATGGAGGCGATCTGCTAT 59.099 55.000 8.94 0.18 45.43 2.97
106 107 2.615869 GATGGAGGCGATCTGCTATTC 58.384 52.381 8.94 5.56 45.43 1.75
107 108 0.681733 TGGAGGCGATCTGCTATTCC 59.318 55.000 8.94 12.30 45.43 3.01
108 109 0.972883 GGAGGCGATCTGCTATTCCT 59.027 55.000 8.94 0.00 45.43 3.36
110 111 1.892474 GAGGCGATCTGCTATTCCTCT 59.108 52.381 8.94 0.00 45.43 3.69
111 112 1.617850 AGGCGATCTGCTATTCCTCTG 59.382 52.381 8.94 0.00 45.43 3.35
112 113 1.615883 GGCGATCTGCTATTCCTCTGA 59.384 52.381 8.94 0.00 45.43 3.27
113 114 2.036475 GGCGATCTGCTATTCCTCTGAA 59.964 50.000 8.94 0.00 45.43 3.02
114 115 3.056304 GCGATCTGCTATTCCTCTGAAC 58.944 50.000 0.00 0.00 41.73 3.18
115 116 3.491619 GCGATCTGCTATTCCTCTGAACA 60.492 47.826 0.00 0.00 41.73 3.18
116 117 4.047822 CGATCTGCTATTCCTCTGAACAC 58.952 47.826 0.00 0.00 32.13 3.32
117 118 3.895232 TCTGCTATTCCTCTGAACACC 57.105 47.619 0.00 0.00 32.13 4.16
121 122 2.893637 CTATTCCTCTGAACACCCGTG 58.106 52.381 0.00 0.00 32.13 4.94
122 123 1.348064 ATTCCTCTGAACACCCGTGA 58.652 50.000 0.96 0.00 32.13 4.35
123 124 1.124780 TTCCTCTGAACACCCGTGAA 58.875 50.000 0.96 0.00 0.00 3.18
126 127 1.873591 CCTCTGAACACCCGTGAAAAG 59.126 52.381 0.96 0.00 0.00 2.27
127 128 2.484770 CCTCTGAACACCCGTGAAAAGA 60.485 50.000 0.96 0.78 0.00 2.52
128 129 3.202906 CTCTGAACACCCGTGAAAAGAA 58.797 45.455 0.96 0.00 0.00 2.52
129 130 3.815401 CTCTGAACACCCGTGAAAAGAAT 59.185 43.478 0.96 0.00 0.00 2.40
130 131 4.204012 TCTGAACACCCGTGAAAAGAATT 58.796 39.130 0.96 0.00 0.00 2.17
131 132 4.036262 TCTGAACACCCGTGAAAAGAATTG 59.964 41.667 0.96 0.00 0.00 2.32
132 133 2.793278 ACACCCGTGAAAAGAATTGC 57.207 45.000 0.96 0.00 0.00 3.56
133 134 2.028130 ACACCCGTGAAAAGAATTGCA 58.972 42.857 0.96 0.00 0.00 4.08
135 136 3.118956 ACACCCGTGAAAAGAATTGCAAA 60.119 39.130 1.71 0.00 0.00 3.68
136 137 3.868077 CACCCGTGAAAAGAATTGCAAAA 59.132 39.130 1.71 0.00 0.00 2.44
137 138 3.868661 ACCCGTGAAAAGAATTGCAAAAC 59.131 39.130 1.71 0.06 0.00 2.43
138 139 3.247411 CCCGTGAAAAGAATTGCAAAACC 59.753 43.478 1.71 0.00 0.00 3.27
139 140 3.060607 CCGTGAAAAGAATTGCAAAACCG 60.061 43.478 1.71 0.00 0.00 4.44
141 142 4.032331 CGTGAAAAGAATTGCAAAACCGTT 59.968 37.500 1.71 0.00 0.00 4.44
142 143 5.230306 CGTGAAAAGAATTGCAAAACCGTTA 59.770 36.000 1.71 0.00 0.00 3.18
143 144 6.074569 CGTGAAAAGAATTGCAAAACCGTTAT 60.075 34.615 1.71 0.00 0.00 1.89
144 145 7.280769 GTGAAAAGAATTGCAAAACCGTTATC 58.719 34.615 1.71 0.00 0.00 1.75
145 146 6.422400 TGAAAAGAATTGCAAAACCGTTATCC 59.578 34.615 1.71 0.00 0.00 2.59
146 147 4.450082 AGAATTGCAAAACCGTTATCCC 57.550 40.909 1.71 0.00 0.00 3.85
147 148 4.086457 AGAATTGCAAAACCGTTATCCCT 58.914 39.130 1.71 0.00 0.00 4.20
148 149 3.866883 ATTGCAAAACCGTTATCCCTG 57.133 42.857 1.71 0.00 0.00 4.45
149 150 2.279935 TGCAAAACCGTTATCCCTGT 57.720 45.000 0.00 0.00 0.00 4.00
151 152 2.959707 TGCAAAACCGTTATCCCTGTTT 59.040 40.909 0.00 0.00 32.62 2.83
152 153 3.385111 TGCAAAACCGTTATCCCTGTTTT 59.615 39.130 0.00 0.00 40.47 2.43
153 154 3.985279 GCAAAACCGTTATCCCTGTTTTC 59.015 43.478 0.00 0.00 38.47 2.29
154 155 4.223659 CAAAACCGTTATCCCTGTTTTCG 58.776 43.478 0.00 0.00 38.47 3.46
155 156 3.405823 AACCGTTATCCCTGTTTTCGA 57.594 42.857 0.00 0.00 0.00 3.71
157 158 4.741321 ACCGTTATCCCTGTTTTCGATA 57.259 40.909 0.00 0.00 0.00 2.92
158 159 5.286267 ACCGTTATCCCTGTTTTCGATAT 57.714 39.130 0.00 0.00 0.00 1.63
160 161 6.819284 ACCGTTATCCCTGTTTTCGATATTA 58.181 36.000 0.00 0.00 0.00 0.98
162 163 7.935210 ACCGTTATCCCTGTTTTCGATATTATT 59.065 33.333 0.00 0.00 0.00 1.40
163 164 8.227791 CCGTTATCCCTGTTTTCGATATTATTG 58.772 37.037 0.00 0.00 0.00 1.90
164 165 8.984764 CGTTATCCCTGTTTTCGATATTATTGA 58.015 33.333 0.00 0.00 0.00 2.57
166 167 7.986085 ATCCCTGTTTTCGATATTATTGAGG 57.014 36.000 0.00 0.00 0.00 3.86
167 168 7.131907 TCCCTGTTTTCGATATTATTGAGGA 57.868 36.000 0.00 0.00 0.00 3.71
168 169 7.570132 TCCCTGTTTTCGATATTATTGAGGAA 58.430 34.615 0.00 0.00 0.00 3.36
170 171 8.507249 CCCTGTTTTCGATATTATTGAGGAATC 58.493 37.037 0.00 0.00 0.00 2.52
174 175 7.582435 TTTCGATATTATTGAGGAATCTCGC 57.418 36.000 0.00 0.00 42.79 5.03
175 176 6.516739 TCGATATTATTGAGGAATCTCGCT 57.483 37.500 0.00 0.00 42.79 4.93
176 177 6.925211 TCGATATTATTGAGGAATCTCGCTT 58.075 36.000 0.00 0.00 42.79 4.68
177 178 7.378966 TCGATATTATTGAGGAATCTCGCTTT 58.621 34.615 0.00 0.00 42.79 3.51
178 179 7.542477 TCGATATTATTGAGGAATCTCGCTTTC 59.458 37.037 0.00 0.00 42.79 2.62
179 180 7.543868 CGATATTATTGAGGAATCTCGCTTTCT 59.456 37.037 0.00 0.00 42.79 2.52
182 183 8.770438 ATTATTGAGGAATCTCGCTTTCTATC 57.230 34.615 0.00 0.00 42.79 2.08
183 184 4.230314 TGAGGAATCTCGCTTTCTATCG 57.770 45.455 0.00 0.00 42.79 2.92
185 186 2.062519 GGAATCTCGCTTTCTATCGCC 58.937 52.381 0.00 0.00 0.00 5.54
187 188 0.318762 ATCTCGCTTTCTATCGCCCC 59.681 55.000 0.00 0.00 0.00 5.80
190 191 1.661821 CGCTTTCTATCGCCCCTCG 60.662 63.158 0.00 0.00 40.15 4.63
198 199 4.388499 TCGCCCCTCGAACTTGCC 62.388 66.667 0.00 0.00 45.36 4.52
201 202 2.757077 CCCCTCGAACTTGCCCTT 59.243 61.111 0.00 0.00 0.00 3.95
202 203 1.377333 CCCCTCGAACTTGCCCTTC 60.377 63.158 0.00 0.00 0.00 3.46
203 204 1.741770 CCCTCGAACTTGCCCTTCG 60.742 63.158 2.06 2.06 41.55 3.79
204 205 2.391389 CCTCGAACTTGCCCTTCGC 61.391 63.158 3.34 0.00 40.29 4.70
205 206 2.358247 TCGAACTTGCCCTTCGCC 60.358 61.111 3.34 0.00 40.29 5.54
206 207 3.788766 CGAACTTGCCCTTCGCCG 61.789 66.667 0.00 0.00 34.59 6.46
207 208 3.431725 GAACTTGCCCTTCGCCGG 61.432 66.667 0.00 0.00 36.24 6.13
211 212 3.615509 CTTGCCCTTCGCCGGGTTA 62.616 63.158 2.18 0.00 46.47 2.85
213 214 2.590859 GCCCTTCGCCGGGTTATC 60.591 66.667 2.18 0.00 46.47 1.75
214 215 2.904905 CCCTTCGCCGGGTTATCA 59.095 61.111 2.18 0.00 39.51 2.15
215 216 1.450211 CCCTTCGCCGGGTTATCAT 59.550 57.895 2.18 0.00 39.51 2.45
216 217 0.179029 CCCTTCGCCGGGTTATCATT 60.179 55.000 2.18 0.00 39.51 2.57
218 219 2.485835 CCCTTCGCCGGGTTATCATTAA 60.486 50.000 2.18 0.00 39.51 1.40
219 220 3.207778 CCTTCGCCGGGTTATCATTAAA 58.792 45.455 2.18 0.00 0.00 1.52
220 221 3.250040 CCTTCGCCGGGTTATCATTAAAG 59.750 47.826 2.18 0.00 0.00 1.85
221 222 3.547054 TCGCCGGGTTATCATTAAAGT 57.453 42.857 2.18 0.00 0.00 2.66
222 223 3.876341 TCGCCGGGTTATCATTAAAGTT 58.124 40.909 2.18 0.00 0.00 2.66
223 224 4.263435 TCGCCGGGTTATCATTAAAGTTT 58.737 39.130 2.18 0.00 0.00 2.66
224 225 4.701171 TCGCCGGGTTATCATTAAAGTTTT 59.299 37.500 2.18 0.00 0.00 2.43
226 227 5.967088 CGCCGGGTTATCATTAAAGTTTTAC 59.033 40.000 2.18 0.00 0.00 2.01
227 228 6.403418 CGCCGGGTTATCATTAAAGTTTTACA 60.403 38.462 2.18 0.00 0.00 2.41
228 229 7.314393 GCCGGGTTATCATTAAAGTTTTACAA 58.686 34.615 2.18 0.00 0.00 2.41
229 230 7.274033 GCCGGGTTATCATTAAAGTTTTACAAC 59.726 37.037 2.18 0.00 0.00 3.32
230 231 7.482428 CCGGGTTATCATTAAAGTTTTACAACG 59.518 37.037 0.00 0.00 38.03 4.10
231 232 7.007636 CGGGTTATCATTAAAGTTTTACAACGC 59.992 37.037 0.00 0.00 38.03 4.84
232 233 7.808856 GGGTTATCATTAAAGTTTTACAACGCA 59.191 33.333 0.00 0.00 38.03 5.24
234 235 9.389570 GTTATCATTAAAGTTTTACAACGCACT 57.610 29.630 0.00 0.00 38.03 4.40
235 236 9.601971 TTATCATTAAAGTTTTACAACGCACTC 57.398 29.630 0.00 0.00 38.03 3.51
237 238 7.699566 TCATTAAAGTTTTACAACGCACTCTT 58.300 30.769 0.00 0.00 38.03 2.85
238 239 7.853929 TCATTAAAGTTTTACAACGCACTCTTC 59.146 33.333 0.00 0.00 38.03 2.87
240 241 3.192466 AGTTTTACAACGCACTCTTCGT 58.808 40.909 0.00 0.00 42.54 3.85
241 242 3.000925 AGTTTTACAACGCACTCTTCGTG 59.999 43.478 0.00 0.00 46.58 4.35
244 245 0.384309 ACAACGCACTCTTCGTGAGA 59.616 50.000 13.35 3.68 46.81 3.27
257 258 1.060713 CGTGAGAAGGCGTTGTACTG 58.939 55.000 0.00 0.00 0.00 2.74
258 259 1.429463 GTGAGAAGGCGTTGTACTGG 58.571 55.000 0.00 0.00 0.00 4.00
259 260 1.000506 GTGAGAAGGCGTTGTACTGGA 59.999 52.381 0.00 0.00 0.00 3.86
260 261 1.899814 TGAGAAGGCGTTGTACTGGAT 59.100 47.619 0.00 0.00 0.00 3.41
261 262 2.094182 TGAGAAGGCGTTGTACTGGATC 60.094 50.000 0.00 0.00 0.00 3.36
262 263 1.207329 AGAAGGCGTTGTACTGGATCC 59.793 52.381 4.20 4.20 0.00 3.36
263 264 0.981183 AAGGCGTTGTACTGGATCCA 59.019 50.000 15.27 15.27 0.00 3.41
267 268 1.810412 GCGTTGTACTGGATCCATCCC 60.810 57.143 16.63 6.32 46.59 3.85
270 271 3.433598 CGTTGTACTGGATCCATCCCATT 60.434 47.826 16.63 0.00 46.59 3.16
271 272 4.202315 CGTTGTACTGGATCCATCCCATTA 60.202 45.833 16.63 0.00 46.59 1.90
273 274 5.762179 TGTACTGGATCCATCCCATTATC 57.238 43.478 16.63 0.00 46.59 1.75
274 275 5.415065 TGTACTGGATCCATCCCATTATCT 58.585 41.667 16.63 0.00 46.59 1.98
275 276 4.923516 ACTGGATCCATCCCATTATCTG 57.076 45.455 16.63 0.92 46.59 2.90
276 277 4.506354 ACTGGATCCATCCCATTATCTGA 58.494 43.478 16.63 0.00 46.59 3.27
279 280 4.287845 TGGATCCATCCCATTATCTGACTG 59.712 45.833 11.44 0.00 46.59 3.51
281 282 5.013495 GGATCCATCCCATTATCTGACTGAA 59.987 44.000 6.95 0.00 41.20 3.02
283 284 7.092712 GGATCCATCCCATTATCTGACTGAATA 60.093 40.741 6.95 0.00 41.20 1.75
284 285 7.631510 TCCATCCCATTATCTGACTGAATAA 57.368 36.000 0.00 0.00 0.00 1.40
285 286 7.453393 TCCATCCCATTATCTGACTGAATAAC 58.547 38.462 0.00 0.00 0.00 1.89
287 288 7.720957 CCATCCCATTATCTGACTGAATAACAA 59.279 37.037 0.00 0.00 0.00 2.83
288 289 9.293404 CATCCCATTATCTGACTGAATAACAAT 57.707 33.333 0.00 0.00 0.00 2.71
314 315 8.815565 TTTATTTAGACCCATATGTTCAGCAA 57.184 30.769 1.24 0.00 0.00 3.91
315 316 8.815565 TTATTTAGACCCATATGTTCAGCAAA 57.184 30.769 1.24 1.58 0.00 3.68
318 319 3.088532 GACCCATATGTTCAGCAAACCA 58.911 45.455 1.24 0.00 37.03 3.67
319 320 3.701040 GACCCATATGTTCAGCAAACCAT 59.299 43.478 1.24 0.00 37.03 3.55
320 321 4.865905 ACCCATATGTTCAGCAAACCATA 58.134 39.130 1.24 0.00 37.03 2.74
323 324 6.042143 CCCATATGTTCAGCAAACCATAAAC 58.958 40.000 1.24 0.00 37.03 2.01
324 325 6.042143 CCATATGTTCAGCAAACCATAAACC 58.958 40.000 1.24 0.00 37.03 3.27
325 326 6.350864 CCATATGTTCAGCAAACCATAAACCA 60.351 38.462 1.24 0.00 37.03 3.67
327 328 5.132897 TGTTCAGCAAACCATAAACCATC 57.867 39.130 0.20 0.00 37.03 3.51
328 329 4.832266 TGTTCAGCAAACCATAAACCATCT 59.168 37.500 0.20 0.00 37.03 2.90
329 330 5.048083 TGTTCAGCAAACCATAAACCATCTC 60.048 40.000 0.20 0.00 37.03 2.75
331 332 3.763360 CAGCAAACCATAAACCATCTCCA 59.237 43.478 0.00 0.00 0.00 3.86
332 333 4.403432 CAGCAAACCATAAACCATCTCCAT 59.597 41.667 0.00 0.00 0.00 3.41
333 334 4.646492 AGCAAACCATAAACCATCTCCATC 59.354 41.667 0.00 0.00 0.00 3.51
334 335 4.646492 GCAAACCATAAACCATCTCCATCT 59.354 41.667 0.00 0.00 0.00 2.90
335 336 5.221126 GCAAACCATAAACCATCTCCATCTC 60.221 44.000 0.00 0.00 0.00 2.75
336 337 5.983333 AACCATAAACCATCTCCATCTCT 57.017 39.130 0.00 0.00 0.00 3.10
338 339 6.678568 ACCATAAACCATCTCCATCTCTAG 57.321 41.667 0.00 0.00 0.00 2.43
339 340 6.146760 ACCATAAACCATCTCCATCTCTAGT 58.853 40.000 0.00 0.00 0.00 2.57
340 341 6.617371 ACCATAAACCATCTCCATCTCTAGTT 59.383 38.462 0.00 0.00 0.00 2.24
414 415 0.891373 CCGACATCACAGTCAGGTCT 59.109 55.000 0.00 0.00 38.43 3.85
442 445 3.483869 ATCTCCCTTGGCCCTCGC 61.484 66.667 0.00 0.00 0.00 5.03
526 1104 0.944386 CAAGACGAAACCCACCACTG 59.056 55.000 0.00 0.00 0.00 3.66
711 1298 2.436646 CCGAGCTGGCGTGGAATT 60.437 61.111 0.00 0.00 0.00 2.17
747 1334 6.085555 TGCCTCTCGTCTCGATATTTTATT 57.914 37.500 0.00 0.00 34.61 1.40
847 1802 1.651240 ATGTGCACGAGCCATTCAGC 61.651 55.000 13.13 0.00 41.13 4.26
864 1819 3.121030 CAACTCCAAGCGCCTCCG 61.121 66.667 2.29 0.00 37.57 4.63
869 1824 3.458163 CCAAGCGCCTCCGTCCTA 61.458 66.667 2.29 0.00 36.67 2.94
871 1826 3.823330 AAGCGCCTCCGTCCTACG 61.823 66.667 2.29 0.00 42.11 3.51
873 1828 3.204827 GCGCCTCCGTCCTACGTA 61.205 66.667 0.00 0.00 40.58 3.57
876 1831 2.484928 GCCTCCGTCCTACGTACCC 61.485 68.421 0.00 0.00 40.58 3.69
910 1875 3.848391 CTCGCGAGATCGACGGAGC 62.848 68.421 32.06 0.00 43.02 4.70
917 1882 3.781770 GATCGACGGAGCCCAGCTG 62.782 68.421 6.78 6.78 39.88 4.24
920 1885 4.828925 GACGGAGCCCAGCTGAGC 62.829 72.222 17.39 15.16 39.88 4.26
922 1887 3.150335 CGGAGCCCAGCTGAGCTA 61.150 66.667 23.87 0.00 39.88 3.32
923 1888 2.725312 CGGAGCCCAGCTGAGCTAA 61.725 63.158 23.87 0.00 39.88 3.09
924 1889 1.145819 GGAGCCCAGCTGAGCTAAG 59.854 63.158 23.87 2.07 39.88 2.18
925 1890 1.145819 GAGCCCAGCTGAGCTAAGG 59.854 63.158 23.87 12.65 39.88 2.69
926 1891 2.515757 GCCCAGCTGAGCTAAGGC 60.516 66.667 25.82 25.82 45.41 4.35
927 1892 2.202987 CCCAGCTGAGCTAAGGCG 60.203 66.667 17.39 0.00 44.37 5.52
928 1893 2.894387 CCAGCTGAGCTAAGGCGC 60.894 66.667 17.39 0.00 44.37 6.53
999 1968 1.348538 CGCACGCTTCGACCATTGTA 61.349 55.000 0.00 0.00 0.00 2.41
1263 2235 4.778143 GGCCACGTCCTTCGCCAT 62.778 66.667 0.00 0.00 44.19 4.40
1287 2265 4.748679 CAGCAGCTTTCGCCACGC 62.749 66.667 0.00 0.00 36.60 5.34
1390 2368 4.148825 GCCAGGAGACGACGCCAT 62.149 66.667 10.46 0.00 38.45 4.40
1391 2369 2.105128 CCAGGAGACGACGCCATC 59.895 66.667 10.46 0.00 38.45 3.51
1442 2420 4.379243 CGCCGGAGAGCAGGTGTT 62.379 66.667 5.05 0.00 35.49 3.32
1443 2421 2.032681 GCCGGAGAGCAGGTGTTT 59.967 61.111 5.05 0.00 0.00 2.83
1577 2561 5.240623 TCGTCAAATTTTGCAGACCAATAGT 59.759 36.000 4.19 0.00 32.49 2.12
1689 2678 3.252458 GGCACTTTACACGTTTTCATCCT 59.748 43.478 0.00 0.00 0.00 3.24
1720 2709 5.175126 CGTCGACTTTACAAAATCTGACTGT 59.825 40.000 14.70 0.00 0.00 3.55
1721 2710 6.355638 GTCGACTTTACAAAATCTGACTGTG 58.644 40.000 8.70 0.00 0.00 3.66
1722 2711 6.200286 GTCGACTTTACAAAATCTGACTGTGA 59.800 38.462 8.70 0.00 0.00 3.58
1723 2712 6.200286 TCGACTTTACAAAATCTGACTGTGAC 59.800 38.462 0.00 0.00 0.00 3.67
1724 2713 6.564125 CGACTTTACAAAATCTGACTGTGACC 60.564 42.308 0.00 0.00 0.00 4.02
1725 2714 6.119536 ACTTTACAAAATCTGACTGTGACCA 58.880 36.000 0.00 0.00 0.00 4.02
1726 2715 6.260936 ACTTTACAAAATCTGACTGTGACCAG 59.739 38.462 0.00 0.00 44.68 4.00
1727 2716 4.422073 ACAAAATCTGACTGTGACCAGA 57.578 40.909 0.00 0.00 41.50 3.86
1728 2717 4.384056 ACAAAATCTGACTGTGACCAGAG 58.616 43.478 0.00 0.00 42.00 3.35
1729 2718 4.101585 ACAAAATCTGACTGTGACCAGAGA 59.898 41.667 0.95 0.00 42.00 3.10
1730 2719 4.963318 AAATCTGACTGTGACCAGAGAA 57.037 40.909 0.95 0.00 42.00 2.87
1731 2720 5.495926 AAATCTGACTGTGACCAGAGAAT 57.504 39.130 0.95 0.00 42.00 2.40
1732 2721 3.949842 TCTGACTGTGACCAGAGAATG 57.050 47.619 0.95 0.00 41.50 2.67
1733 2722 2.028658 TCTGACTGTGACCAGAGAATGC 60.029 50.000 0.95 0.00 41.50 3.56
1734 2723 1.693606 TGACTGTGACCAGAGAATGCA 59.306 47.619 0.95 0.00 41.50 3.96
1735 2724 2.303890 TGACTGTGACCAGAGAATGCAT 59.696 45.455 0.00 0.00 41.50 3.96
1736 2725 3.515104 TGACTGTGACCAGAGAATGCATA 59.485 43.478 0.00 0.00 41.50 3.14
1737 2726 4.162888 TGACTGTGACCAGAGAATGCATAT 59.837 41.667 0.00 0.00 41.50 1.78
1738 2727 5.363580 TGACTGTGACCAGAGAATGCATATA 59.636 40.000 0.00 0.00 41.50 0.86
1739 2728 6.127083 TGACTGTGACCAGAGAATGCATATAA 60.127 38.462 0.00 0.00 41.50 0.98
1740 2729 6.051717 ACTGTGACCAGAGAATGCATATAAC 58.948 40.000 0.00 0.00 41.50 1.89
1741 2730 5.988287 TGTGACCAGAGAATGCATATAACA 58.012 37.500 0.00 0.00 0.00 2.41
1742 2731 6.413892 TGTGACCAGAGAATGCATATAACAA 58.586 36.000 0.00 0.00 0.00 2.83
1743 2732 6.883756 TGTGACCAGAGAATGCATATAACAAA 59.116 34.615 0.00 0.00 0.00 2.83
1744 2733 7.392953 TGTGACCAGAGAATGCATATAACAAAA 59.607 33.333 0.00 0.00 0.00 2.44
1745 2734 8.408601 GTGACCAGAGAATGCATATAACAAAAT 58.591 33.333 0.00 0.00 0.00 1.82
1746 2735 8.970020 TGACCAGAGAATGCATATAACAAAATT 58.030 29.630 0.00 0.00 0.00 1.82
1807 2796 8.186709 TGACTGAGATCAGAGAATGCATATAA 57.813 34.615 16.52 0.00 46.59 0.98
1869 2858 1.956477 TCCGCTATAAACCTCGGTACC 59.044 52.381 0.16 0.16 42.28 3.34
1900 2889 0.313672 TTCAACTTCATTGCCGGTGC 59.686 50.000 1.90 0.00 38.29 5.01
1907 2896 0.611618 TCATTGCCGGTGCCTTTGAT 60.612 50.000 1.90 0.00 36.33 2.57
1921 2910 4.157656 TGCCTTTGATAAAACCTGGAATCG 59.842 41.667 0.00 0.00 0.00 3.34
1924 2913 3.358111 TGATAAAACCTGGAATCGCCA 57.642 42.857 0.00 0.00 46.96 5.69
1965 2954 6.820152 CACATCCAAGAAGAGAATGACACATA 59.180 38.462 0.00 0.00 0.00 2.29
1967 2956 8.708378 ACATCCAAGAAGAGAATGACACATATA 58.292 33.333 0.00 0.00 0.00 0.86
1988 2977 2.885644 CCACGGTGAGCGGATTCG 60.886 66.667 10.28 0.00 39.81 3.34
1995 2984 1.393883 GGTGAGCGGATTCGAGAAAAC 59.606 52.381 0.00 0.00 39.00 2.43
2002 2991 3.058501 GCGGATTCGAGAAAACTCCAAAA 60.059 43.478 0.00 0.00 39.00 2.44
2003 2992 4.712763 CGGATTCGAGAAAACTCCAAAAG 58.287 43.478 0.00 0.00 39.00 2.27
2008 2997 3.800506 TCGAGAAAACTCCAAAAGTCGTC 59.199 43.478 0.00 0.00 37.17 4.20
2030 3019 5.403466 GTCTTCACCAAGAAAACAATGCATC 59.597 40.000 0.00 0.00 40.49 3.91
2056 3045 0.189080 TGCCTCCTACGCCCCTAATA 59.811 55.000 0.00 0.00 0.00 0.98
2069 3058 5.105917 ACGCCCCTAATAAAACTCATGTTTG 60.106 40.000 0.00 0.00 44.70 2.93
2073 3062 6.663523 CCCCTAATAAAACTCATGTTTGTCCT 59.336 38.462 0.00 0.00 44.70 3.85
2082 3071 0.902531 ATGTTTGTCCTCGTCCCGAT 59.097 50.000 0.00 0.00 34.61 4.18
2117 3106 0.617820 TGGTTCCTCTACCCCAGCTC 60.618 60.000 0.00 0.00 37.39 4.09
2122 3111 3.075005 TCTACCCCAGCTCGTGCC 61.075 66.667 5.73 0.00 40.80 5.01
2173 3162 5.625150 CGTACCTAGGTTATACTACCAGGT 58.375 45.833 22.11 15.89 44.56 4.00
2178 3167 5.307196 CCTAGGTTATACTACCAGGTTGCAT 59.693 44.000 0.00 0.00 40.82 3.96
2188 3177 2.086869 CCAGGTTGCATAGAACACCAG 58.913 52.381 5.81 0.00 0.00 4.00
2193 3182 3.146066 GTTGCATAGAACACCAGGTCAA 58.854 45.455 0.00 0.00 0.00 3.18
2198 3187 5.048083 TGCATAGAACACCAGGTCAAAAATC 60.048 40.000 0.00 0.00 0.00 2.17
2199 3188 5.622233 GCATAGAACACCAGGTCAAAAATCC 60.622 44.000 0.00 0.00 0.00 3.01
2214 3207 7.814587 GGTCAAAAATCCTTTTCCTTCATACAG 59.185 37.037 0.00 0.00 32.24 2.74
2244 3237 6.855941 CATACATTGGTGTGTGACACTCTCG 61.856 48.000 17.47 6.11 46.72 4.04
2251 3244 2.548480 TGTGTGACACTCTCGACTGTAG 59.452 50.000 17.47 0.00 35.11 2.74
2259 3252 4.230657 CACTCTCGACTGTAGGTGAAAAG 58.769 47.826 0.00 0.00 0.00 2.27
2269 3262 4.242475 TGTAGGTGAAAAGCATACGTCAG 58.758 43.478 0.00 0.00 0.00 3.51
2277 3270 6.090898 GTGAAAAGCATACGTCAGTTGTAGAT 59.909 38.462 0.00 0.00 0.00 1.98
2311 3309 1.652947 TTTCACTCTAGGTCCACCCC 58.347 55.000 0.00 0.00 36.42 4.95
2318 3316 2.537714 CTAGGTCCACCCCTGGCTCT 62.538 65.000 0.00 0.00 37.49 4.09
2323 3321 2.046892 CACCCCTGGCTCTGAACG 60.047 66.667 0.00 0.00 0.00 3.95
2339 3337 3.541713 CGCCTCCACCCTAGCTCC 61.542 72.222 0.00 0.00 0.00 4.70
2341 3339 1.995626 GCCTCCACCCTAGCTCCAA 60.996 63.158 0.00 0.00 0.00 3.53
2344 3342 0.618968 CTCCACCCTAGCTCCAACCT 60.619 60.000 0.00 0.00 0.00 3.50
2353 3351 3.132289 CCTAGCTCCAACCTTGTTATCGA 59.868 47.826 0.00 0.00 0.00 3.59
2354 3352 2.973945 AGCTCCAACCTTGTTATCGAC 58.026 47.619 0.00 0.00 0.00 4.20
2355 3353 2.301870 AGCTCCAACCTTGTTATCGACA 59.698 45.455 0.00 0.00 36.19 4.35
2356 3354 3.071479 GCTCCAACCTTGTTATCGACAA 58.929 45.455 0.00 0.00 45.70 3.18
2364 3362 2.561733 TGTTATCGACAAGAGCGAGG 57.438 50.000 0.00 0.00 41.49 4.63
2365 3363 1.816835 TGTTATCGACAAGAGCGAGGT 59.183 47.619 0.00 0.00 41.49 3.85
2366 3364 2.159421 TGTTATCGACAAGAGCGAGGTC 60.159 50.000 0.00 0.00 41.49 3.85
2367 3365 1.746470 TATCGACAAGAGCGAGGTCA 58.254 50.000 5.06 0.00 41.49 4.02
2368 3366 1.107114 ATCGACAAGAGCGAGGTCAT 58.893 50.000 5.06 0.00 41.49 3.06
2369 3367 0.452184 TCGACAAGAGCGAGGTCATC 59.548 55.000 5.06 0.00 33.33 2.92
2381 3379 3.950078 CGAGGTCATCGTTCTAGGTTAC 58.050 50.000 0.00 0.00 46.62 2.50
2382 3380 3.243002 CGAGGTCATCGTTCTAGGTTACC 60.243 52.174 0.00 0.00 46.62 2.85
2383 3381 3.029570 AGGTCATCGTTCTAGGTTACCC 58.970 50.000 0.00 0.00 0.00 3.69
2384 3382 3.029570 GGTCATCGTTCTAGGTTACCCT 58.970 50.000 0.00 0.00 45.51 4.34
2385 3383 3.181478 GGTCATCGTTCTAGGTTACCCTG 60.181 52.174 0.00 0.00 42.67 4.45
2386 3384 2.429610 TCATCGTTCTAGGTTACCCTGC 59.570 50.000 0.00 0.00 42.67 4.85
2387 3385 2.226962 TCGTTCTAGGTTACCCTGCT 57.773 50.000 0.00 0.00 42.67 4.24
2388 3386 1.822990 TCGTTCTAGGTTACCCTGCTG 59.177 52.381 0.00 0.00 42.67 4.41
2389 3387 1.822990 CGTTCTAGGTTACCCTGCTGA 59.177 52.381 0.00 0.00 42.67 4.26
2390 3388 2.159226 CGTTCTAGGTTACCCTGCTGAG 60.159 54.545 0.00 0.00 42.67 3.35
2391 3389 2.160721 TCTAGGTTACCCTGCTGAGG 57.839 55.000 0.00 0.00 42.67 3.86
2392 3390 1.644337 TCTAGGTTACCCTGCTGAGGA 59.356 52.381 0.00 0.00 42.93 3.71
2393 3391 1.757699 CTAGGTTACCCTGCTGAGGAC 59.242 57.143 0.00 0.00 42.93 3.85
2394 3392 0.910088 AGGTTACCCTGCTGAGGACC 60.910 60.000 0.00 0.00 42.93 4.46
2395 3393 1.198759 GGTTACCCTGCTGAGGACCA 61.199 60.000 0.00 0.00 42.93 4.02
2396 3394 0.690762 GTTACCCTGCTGAGGACCAA 59.309 55.000 0.00 0.00 42.93 3.67
2397 3395 0.690762 TTACCCTGCTGAGGACCAAC 59.309 55.000 0.00 0.00 42.93 3.77
2398 3396 0.472925 TACCCTGCTGAGGACCAACA 60.473 55.000 0.00 0.00 42.93 3.33
2399 3397 1.002868 CCCTGCTGAGGACCAACAG 60.003 63.158 12.47 12.47 42.93 3.16
2400 3398 1.483595 CCCTGCTGAGGACCAACAGA 61.484 60.000 18.64 6.73 42.93 3.41
2401 3399 0.036577 CCTGCTGAGGACCAACAGAG 60.037 60.000 18.64 13.23 42.93 3.35
2402 3400 0.036577 CTGCTGAGGACCAACAGAGG 60.037 60.000 18.64 8.89 40.51 3.69
2403 3401 0.471780 TGCTGAGGACCAACAGAGGA 60.472 55.000 18.64 3.35 36.38 3.71
2404 3402 0.908198 GCTGAGGACCAACAGAGGAT 59.092 55.000 18.64 0.00 36.38 3.24
2405 3403 1.280421 GCTGAGGACCAACAGAGGATT 59.720 52.381 18.64 0.00 36.38 3.01
2406 3404 2.938756 GCTGAGGACCAACAGAGGATTG 60.939 54.545 18.64 0.00 36.38 2.67
2407 3405 1.003580 TGAGGACCAACAGAGGATTGC 59.996 52.381 0.00 0.00 0.00 3.56
2408 3406 0.036010 AGGACCAACAGAGGATTGCG 60.036 55.000 0.00 0.00 0.00 4.85
2409 3407 1.026718 GGACCAACAGAGGATTGCGG 61.027 60.000 0.00 0.00 0.00 5.69
2410 3408 0.036388 GACCAACAGAGGATTGCGGA 60.036 55.000 0.00 0.00 0.00 5.54
2411 3409 0.620556 ACCAACAGAGGATTGCGGAT 59.379 50.000 0.00 0.00 0.00 4.18
2412 3410 1.837439 ACCAACAGAGGATTGCGGATA 59.163 47.619 0.00 0.00 0.00 2.59
2413 3411 2.238646 ACCAACAGAGGATTGCGGATAA 59.761 45.455 0.00 0.00 0.00 1.75
2414 3412 3.117888 ACCAACAGAGGATTGCGGATAAT 60.118 43.478 0.00 0.00 0.00 1.28
2415 3413 3.499918 CCAACAGAGGATTGCGGATAATC 59.500 47.826 0.00 0.00 36.55 1.75
2416 3414 4.384056 CAACAGAGGATTGCGGATAATCT 58.616 43.478 0.00 0.00 37.26 2.40
2417 3415 4.264460 ACAGAGGATTGCGGATAATCTC 57.736 45.455 0.00 0.00 37.26 2.75
2418 3416 3.643320 ACAGAGGATTGCGGATAATCTCA 59.357 43.478 0.00 0.00 37.26 3.27
2419 3417 4.101585 ACAGAGGATTGCGGATAATCTCAA 59.898 41.667 0.00 0.00 37.26 3.02
2420 3418 5.221803 ACAGAGGATTGCGGATAATCTCAAT 60.222 40.000 0.00 0.00 37.26 2.57
2421 3419 5.704515 CAGAGGATTGCGGATAATCTCAATT 59.295 40.000 0.00 0.00 37.26 2.32
2422 3420 5.704515 AGAGGATTGCGGATAATCTCAATTG 59.295 40.000 0.00 0.00 37.26 2.32
2423 3421 4.217118 AGGATTGCGGATAATCTCAATTGC 59.783 41.667 0.00 0.00 37.26 3.56
2424 3422 4.022935 GGATTGCGGATAATCTCAATTGCA 60.023 41.667 0.00 0.00 37.26 4.08
2425 3423 4.556942 TTGCGGATAATCTCAATTGCAG 57.443 40.909 0.00 0.00 32.12 4.41
2426 3424 2.880268 TGCGGATAATCTCAATTGCAGG 59.120 45.455 0.00 0.00 0.00 4.85
2427 3425 2.351157 GCGGATAATCTCAATTGCAGGC 60.351 50.000 0.00 0.00 0.00 4.85
2428 3426 3.144506 CGGATAATCTCAATTGCAGGCT 58.855 45.455 0.00 0.00 0.00 4.58
2429 3427 4.318332 CGGATAATCTCAATTGCAGGCTA 58.682 43.478 0.00 0.00 0.00 3.93
2430 3428 4.756642 CGGATAATCTCAATTGCAGGCTAA 59.243 41.667 0.00 0.00 0.00 3.09
2431 3429 5.334414 CGGATAATCTCAATTGCAGGCTAAC 60.334 44.000 0.00 0.00 0.00 2.34
2432 3430 5.532406 GGATAATCTCAATTGCAGGCTAACA 59.468 40.000 0.00 0.00 0.00 2.41
2433 3431 6.208204 GGATAATCTCAATTGCAGGCTAACAT 59.792 38.462 0.00 0.00 0.00 2.71
2434 3432 5.511234 AATCTCAATTGCAGGCTAACATC 57.489 39.130 0.00 0.00 0.00 3.06
2435 3433 3.282021 TCTCAATTGCAGGCTAACATCC 58.718 45.455 0.00 0.00 0.00 3.51
2436 3434 3.054139 TCTCAATTGCAGGCTAACATCCT 60.054 43.478 0.00 0.00 0.00 3.24
2437 3435 3.698040 CTCAATTGCAGGCTAACATCCTT 59.302 43.478 0.00 0.00 0.00 3.36
2438 3436 3.696051 TCAATTGCAGGCTAACATCCTTC 59.304 43.478 0.00 0.00 0.00 3.46
2439 3437 2.128771 TTGCAGGCTAACATCCTTCC 57.871 50.000 0.00 0.00 0.00 3.46
2440 3438 0.255890 TGCAGGCTAACATCCTTCCC 59.744 55.000 0.00 0.00 0.00 3.97
2441 3439 0.466372 GCAGGCTAACATCCTTCCCC 60.466 60.000 0.00 0.00 0.00 4.81
2442 3440 0.918983 CAGGCTAACATCCTTCCCCA 59.081 55.000 0.00 0.00 0.00 4.96
2443 3441 1.496429 CAGGCTAACATCCTTCCCCAT 59.504 52.381 0.00 0.00 0.00 4.00
2444 3442 2.091665 CAGGCTAACATCCTTCCCCATT 60.092 50.000 0.00 0.00 0.00 3.16
2445 3443 3.138283 CAGGCTAACATCCTTCCCCATTA 59.862 47.826 0.00 0.00 0.00 1.90
2446 3444 3.138468 AGGCTAACATCCTTCCCCATTAC 59.862 47.826 0.00 0.00 0.00 1.89
2447 3445 3.117663 GGCTAACATCCTTCCCCATTACA 60.118 47.826 0.00 0.00 0.00 2.41
2448 3446 4.447762 GGCTAACATCCTTCCCCATTACAT 60.448 45.833 0.00 0.00 0.00 2.29
2449 3447 5.222048 GGCTAACATCCTTCCCCATTACATA 60.222 44.000 0.00 0.00 0.00 2.29
2450 3448 5.705905 GCTAACATCCTTCCCCATTACATAC 59.294 44.000 0.00 0.00 0.00 2.39
2451 3449 5.994416 AACATCCTTCCCCATTACATACT 57.006 39.130 0.00 0.00 0.00 2.12
2452 3450 5.994416 ACATCCTTCCCCATTACATACTT 57.006 39.130 0.00 0.00 0.00 2.24
2453 3451 5.694995 ACATCCTTCCCCATTACATACTTG 58.305 41.667 0.00 0.00 0.00 3.16
2454 3452 4.788925 TCCTTCCCCATTACATACTTGG 57.211 45.455 0.00 0.00 0.00 3.61
2460 3458 3.157087 CCCATTACATACTTGGGGATGC 58.843 50.000 0.00 0.00 45.37 3.91
2461 3459 3.157087 CCATTACATACTTGGGGATGCC 58.843 50.000 0.00 0.00 0.00 4.40
2462 3460 2.631160 TTACATACTTGGGGATGCCG 57.369 50.000 0.00 0.00 0.00 5.69
2463 3461 1.502690 TACATACTTGGGGATGCCGT 58.497 50.000 0.00 0.00 0.00 5.68
2464 3462 0.623723 ACATACTTGGGGATGCCGTT 59.376 50.000 0.00 0.00 0.00 4.44
2465 3463 1.024271 CATACTTGGGGATGCCGTTG 58.976 55.000 0.00 0.00 0.00 4.10
2466 3464 0.106719 ATACTTGGGGATGCCGTTGG 60.107 55.000 0.00 0.00 0.00 3.77
2478 3476 3.305709 CCGTTGGCAGACTCAAAGA 57.694 52.632 0.00 0.00 0.00 2.52
2479 3477 1.813513 CCGTTGGCAGACTCAAAGAT 58.186 50.000 0.00 0.00 0.00 2.40
2480 3478 1.734465 CCGTTGGCAGACTCAAAGATC 59.266 52.381 0.00 0.00 0.00 2.75
2481 3479 1.734465 CGTTGGCAGACTCAAAGATCC 59.266 52.381 0.00 0.00 0.00 3.36
2482 3480 2.613977 CGTTGGCAGACTCAAAGATCCT 60.614 50.000 0.00 0.00 0.00 3.24
2483 3481 2.746362 GTTGGCAGACTCAAAGATCCTG 59.254 50.000 0.00 0.00 0.00 3.86
2484 3482 2.259917 TGGCAGACTCAAAGATCCTGA 58.740 47.619 0.00 0.00 0.00 3.86
2485 3483 2.027745 TGGCAGACTCAAAGATCCTGAC 60.028 50.000 0.00 0.00 33.66 3.51
2486 3484 2.027745 GGCAGACTCAAAGATCCTGACA 60.028 50.000 0.00 0.00 33.29 3.58
2487 3485 3.557898 GGCAGACTCAAAGATCCTGACAA 60.558 47.826 0.00 0.00 33.29 3.18
2488 3486 3.683822 GCAGACTCAAAGATCCTGACAAG 59.316 47.826 0.00 0.00 0.00 3.16
2489 3487 4.802248 GCAGACTCAAAGATCCTGACAAGT 60.802 45.833 0.00 0.00 0.00 3.16
2490 3488 4.689812 CAGACTCAAAGATCCTGACAAGTG 59.310 45.833 0.00 0.00 0.00 3.16
2491 3489 3.406764 ACTCAAAGATCCTGACAAGTGC 58.593 45.455 0.00 0.00 0.00 4.40
2492 3490 3.181451 ACTCAAAGATCCTGACAAGTGCA 60.181 43.478 0.00 0.00 0.00 4.57
2493 3491 4.008330 CTCAAAGATCCTGACAAGTGCAT 58.992 43.478 0.00 0.00 0.00 3.96
2494 3492 4.401022 TCAAAGATCCTGACAAGTGCATT 58.599 39.130 0.00 0.00 0.00 3.56
2495 3493 4.456911 TCAAAGATCCTGACAAGTGCATTC 59.543 41.667 0.00 0.00 0.00 2.67
2496 3494 2.625737 AGATCCTGACAAGTGCATTCG 58.374 47.619 0.00 0.00 0.00 3.34
2497 3495 2.234661 AGATCCTGACAAGTGCATTCGA 59.765 45.455 0.00 0.00 0.00 3.71
2498 3496 1.795768 TCCTGACAAGTGCATTCGAC 58.204 50.000 0.00 0.00 0.00 4.20
2499 3497 0.798776 CCTGACAAGTGCATTCGACC 59.201 55.000 0.00 0.00 0.00 4.79
2500 3498 0.798776 CTGACAAGTGCATTCGACCC 59.201 55.000 0.00 0.00 0.00 4.46
2501 3499 0.948623 TGACAAGTGCATTCGACCCG 60.949 55.000 0.00 0.00 0.00 5.28
2502 3500 2.240612 GACAAGTGCATTCGACCCGC 62.241 60.000 0.00 0.00 0.00 6.13
2503 3501 2.034879 CAAGTGCATTCGACCCGCT 61.035 57.895 0.00 0.00 0.00 5.52
2504 3502 0.739462 CAAGTGCATTCGACCCGCTA 60.739 55.000 0.00 0.00 0.00 4.26
2505 3503 0.460284 AAGTGCATTCGACCCGCTAG 60.460 55.000 0.00 0.00 0.00 3.42
2506 3504 1.153628 GTGCATTCGACCCGCTAGT 60.154 57.895 0.00 0.00 0.00 2.57
2507 3505 1.153647 TGCATTCGACCCGCTAGTG 60.154 57.895 0.00 0.00 0.00 2.74
2508 3506 1.883084 GCATTCGACCCGCTAGTGG 60.883 63.158 15.87 15.87 0.00 4.00
2516 3514 4.143333 CCGCTAGTGGGACGGGTG 62.143 72.222 15.00 0.00 43.23 4.61
2517 3515 4.143333 CGCTAGTGGGACGGGTGG 62.143 72.222 0.00 0.00 0.00 4.61
2518 3516 4.468689 GCTAGTGGGACGGGTGGC 62.469 72.222 0.00 0.00 0.00 5.01
2519 3517 3.782443 CTAGTGGGACGGGTGGCC 61.782 72.222 0.00 0.00 0.00 5.36
2520 3518 4.326227 TAGTGGGACGGGTGGCCT 62.326 66.667 3.32 0.00 0.00 5.19
2529 3527 4.410400 GGGTGGCCTCTCGGGTTG 62.410 72.222 3.32 0.00 37.43 3.77
2530 3528 3.319198 GGTGGCCTCTCGGGTTGA 61.319 66.667 3.32 0.00 37.43 3.18
2531 3529 2.266055 GTGGCCTCTCGGGTTGAG 59.734 66.667 3.32 0.00 46.72 3.02
2540 3538 3.691342 CGGGTTGAGACCTGGCGA 61.691 66.667 0.00 0.00 46.76 5.54
2541 3539 2.266055 GGGTTGAGACCTGGCGAG 59.734 66.667 0.00 0.00 45.75 5.03
2542 3540 2.266055 GGTTGAGACCTGGCGAGG 59.734 66.667 14.03 14.03 46.21 4.63
2543 3541 2.283529 GGTTGAGACCTGGCGAGGA 61.284 63.158 23.01 0.00 42.93 3.71
2544 3542 1.079750 GTTGAGACCTGGCGAGGAC 60.080 63.158 23.01 15.78 42.93 3.85
2545 3543 2.636412 TTGAGACCTGGCGAGGACG 61.636 63.158 23.01 0.00 42.93 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 0.881600 GTTTGAACGTGTACGGGCCT 60.882 55.000 0.84 0.00 44.95 5.19
15 16 1.570967 GTTTGAACGTGTACGGGCC 59.429 57.895 9.40 0.00 44.95 5.80
16 17 1.159098 TGGTTTGAACGTGTACGGGC 61.159 55.000 9.40 1.02 44.95 6.13
17 18 0.582960 GTGGTTTGAACGTGTACGGG 59.417 55.000 9.40 0.00 44.95 5.28
18 19 0.230260 CGTGGTTTGAACGTGTACGG 59.770 55.000 9.40 0.00 44.95 4.02
19 20 0.382151 GCGTGGTTTGAACGTGTACG 60.382 55.000 2.43 2.43 42.93 3.67
21 22 1.159098 GGGCGTGGTTTGAACGTGTA 61.159 55.000 0.00 0.00 42.93 2.90
22 23 2.474612 GGGCGTGGTTTGAACGTGT 61.475 57.895 0.00 0.00 42.93 4.49
24 25 2.184167 CAGGGCGTGGTTTGAACGT 61.184 57.895 0.00 0.00 42.93 3.99
25 26 1.440938 TTCAGGGCGTGGTTTGAACG 61.441 55.000 7.42 0.00 43.81 3.95
26 27 0.030235 GTTCAGGGCGTGGTTTGAAC 59.970 55.000 7.42 0.37 41.56 3.18
27 28 1.104577 GGTTCAGGGCGTGGTTTGAA 61.105 55.000 7.42 0.00 0.00 2.69
28 29 1.527380 GGTTCAGGGCGTGGTTTGA 60.527 57.895 7.42 0.00 0.00 2.69
30 31 1.106944 CAAGGTTCAGGGCGTGGTTT 61.107 55.000 7.42 0.00 0.00 3.27
32 33 2.113139 CAAGGTTCAGGGCGTGGT 59.887 61.111 7.42 0.00 0.00 4.16
33 34 3.365265 GCAAGGTTCAGGGCGTGG 61.365 66.667 7.42 0.00 0.00 4.94
34 35 3.365265 GGCAAGGTTCAGGGCGTG 61.365 66.667 0.00 0.00 0.00 5.34
43 44 2.741486 TTAAGAGCGGCGGCAAGGTT 62.741 55.000 19.21 8.11 43.41 3.50
44 45 2.741486 TTTAAGAGCGGCGGCAAGGT 62.741 55.000 19.21 0.00 43.41 3.50
45 46 2.038269 TTTAAGAGCGGCGGCAAGG 61.038 57.895 19.21 0.00 43.41 3.61
46 47 1.134694 GTTTAAGAGCGGCGGCAAG 59.865 57.895 19.21 0.00 43.41 4.01
48 49 3.115892 CGTTTAAGAGCGGCGGCA 61.116 61.111 19.21 0.00 43.41 5.69
49 50 3.861263 CCGTTTAAGAGCGGCGGC 61.861 66.667 9.78 8.43 42.73 6.53
54 55 2.687436 CGCGTCCGTTTAAGAGCG 59.313 61.111 0.00 0.00 41.56 5.03
55 56 0.571197 GATCGCGTCCGTTTAAGAGC 59.429 55.000 5.77 0.00 35.54 4.09
56 57 1.197910 GGATCGCGTCCGTTTAAGAG 58.802 55.000 5.77 0.00 37.23 2.85
66 67 3.454375 TCCTTTAAGATTGGATCGCGTC 58.546 45.455 5.77 2.75 0.00 5.19
68 69 3.187227 CCATCCTTTAAGATTGGATCGCG 59.813 47.826 0.00 0.00 38.41 5.87
69 70 4.389374 TCCATCCTTTAAGATTGGATCGC 58.611 43.478 10.40 0.00 38.41 4.58
70 71 4.999950 CCTCCATCCTTTAAGATTGGATCG 59.000 45.833 13.50 6.10 38.41 3.69
71 72 4.764308 GCCTCCATCCTTTAAGATTGGATC 59.236 45.833 13.50 7.54 38.41 3.36
73 74 3.433598 CGCCTCCATCCTTTAAGATTGGA 60.434 47.826 12.80 12.80 0.00 3.53
74 75 2.880890 CGCCTCCATCCTTTAAGATTGG 59.119 50.000 6.76 6.76 0.00 3.16
75 76 3.808728 TCGCCTCCATCCTTTAAGATTG 58.191 45.455 0.00 0.00 0.00 2.67
77 78 3.906846 AGATCGCCTCCATCCTTTAAGAT 59.093 43.478 0.00 0.00 0.00 2.40
78 79 3.070159 CAGATCGCCTCCATCCTTTAAGA 59.930 47.826 0.00 0.00 0.00 2.10
79 80 3.397482 CAGATCGCCTCCATCCTTTAAG 58.603 50.000 0.00 0.00 0.00 1.85
80 81 2.485479 GCAGATCGCCTCCATCCTTTAA 60.485 50.000 0.00 0.00 32.94 1.52
81 82 1.070758 GCAGATCGCCTCCATCCTTTA 59.929 52.381 0.00 0.00 32.94 1.85
83 84 1.053264 AGCAGATCGCCTCCATCCTT 61.053 55.000 6.02 0.00 44.04 3.36
84 85 0.178950 TAGCAGATCGCCTCCATCCT 60.179 55.000 6.02 0.00 44.04 3.24
85 86 0.901124 ATAGCAGATCGCCTCCATCC 59.099 55.000 6.02 0.00 44.04 3.51
86 87 2.615869 GAATAGCAGATCGCCTCCATC 58.384 52.381 6.02 0.00 44.04 3.51
87 88 1.277557 GGAATAGCAGATCGCCTCCAT 59.722 52.381 13.22 0.00 44.04 3.41
88 89 0.681733 GGAATAGCAGATCGCCTCCA 59.318 55.000 13.22 0.00 44.04 3.86
89 90 0.972883 AGGAATAGCAGATCGCCTCC 59.027 55.000 6.02 9.26 44.04 4.30
92 93 1.615883 TCAGAGGAATAGCAGATCGCC 59.384 52.381 6.02 0.00 44.04 5.54
93 94 3.056304 GTTCAGAGGAATAGCAGATCGC 58.944 50.000 1.92 1.92 36.67 4.58
94 95 4.047822 GTGTTCAGAGGAATAGCAGATCG 58.952 47.826 0.00 0.00 35.05 3.69
95 96 4.376146 GGTGTTCAGAGGAATAGCAGATC 58.624 47.826 0.00 0.00 40.86 2.75
96 97 3.135530 GGGTGTTCAGAGGAATAGCAGAT 59.864 47.826 5.90 0.00 42.33 2.90
98 99 2.739932 CGGGTGTTCAGAGGAATAGCAG 60.740 54.545 5.90 0.00 42.33 4.24
100 101 1.207329 ACGGGTGTTCAGAGGAATAGC 59.793 52.381 0.00 0.00 40.57 2.97
101 102 2.496070 TCACGGGTGTTCAGAGGAATAG 59.504 50.000 0.00 0.00 35.05 1.73
102 103 2.531771 TCACGGGTGTTCAGAGGAATA 58.468 47.619 0.00 0.00 35.05 1.75
103 104 1.348064 TCACGGGTGTTCAGAGGAAT 58.652 50.000 0.00 0.00 35.05 3.01
104 105 1.124780 TTCACGGGTGTTCAGAGGAA 58.875 50.000 0.00 0.00 0.00 3.36
106 107 1.873591 CTTTTCACGGGTGTTCAGAGG 59.126 52.381 0.00 0.00 0.00 3.69
107 108 2.833794 TCTTTTCACGGGTGTTCAGAG 58.166 47.619 0.00 0.00 0.00 3.35
108 109 2.992124 TCTTTTCACGGGTGTTCAGA 57.008 45.000 0.00 0.00 0.00 3.27
110 111 3.490078 GCAATTCTTTTCACGGGTGTTCA 60.490 43.478 0.00 0.00 0.00 3.18
111 112 3.049912 GCAATTCTTTTCACGGGTGTTC 58.950 45.455 0.00 0.00 0.00 3.18
112 113 2.428890 TGCAATTCTTTTCACGGGTGTT 59.571 40.909 0.00 0.00 0.00 3.32
113 114 2.028130 TGCAATTCTTTTCACGGGTGT 58.972 42.857 0.00 0.00 0.00 4.16
114 115 2.791383 TGCAATTCTTTTCACGGGTG 57.209 45.000 0.00 0.00 0.00 4.61
115 116 3.810310 TTTGCAATTCTTTTCACGGGT 57.190 38.095 0.00 0.00 0.00 5.28
116 117 3.247411 GGTTTTGCAATTCTTTTCACGGG 59.753 43.478 0.00 0.00 0.00 5.28
117 118 3.060607 CGGTTTTGCAATTCTTTTCACGG 60.061 43.478 0.00 0.00 0.00 4.94
121 122 6.128661 GGGATAACGGTTTTGCAATTCTTTTC 60.129 38.462 0.00 0.00 0.00 2.29
122 123 5.699001 GGGATAACGGTTTTGCAATTCTTTT 59.301 36.000 0.00 0.00 0.00 2.27
123 124 5.011635 AGGGATAACGGTTTTGCAATTCTTT 59.988 36.000 0.00 0.00 0.00 2.52
126 127 4.173256 CAGGGATAACGGTTTTGCAATTC 58.827 43.478 0.00 0.00 0.00 2.17
127 128 3.576550 ACAGGGATAACGGTTTTGCAATT 59.423 39.130 0.00 0.00 0.00 2.32
128 129 3.161866 ACAGGGATAACGGTTTTGCAAT 58.838 40.909 0.00 0.00 0.00 3.56
129 130 2.588620 ACAGGGATAACGGTTTTGCAA 58.411 42.857 0.00 0.00 0.00 4.08
130 131 2.279935 ACAGGGATAACGGTTTTGCA 57.720 45.000 0.00 0.00 0.00 4.08
131 132 3.653539 AAACAGGGATAACGGTTTTGC 57.346 42.857 0.00 0.00 29.77 3.68
132 133 4.023878 TCGAAAACAGGGATAACGGTTTTG 60.024 41.667 10.87 5.40 41.85 2.44
133 134 4.136051 TCGAAAACAGGGATAACGGTTTT 58.864 39.130 0.00 6.85 43.76 2.43
135 136 3.405823 TCGAAAACAGGGATAACGGTT 57.594 42.857 0.00 0.00 0.00 4.44
136 137 3.622166 ATCGAAAACAGGGATAACGGT 57.378 42.857 0.00 0.00 0.00 4.83
137 138 7.900782 ATAATATCGAAAACAGGGATAACGG 57.099 36.000 0.00 0.00 0.00 4.44
138 139 8.984764 TCAATAATATCGAAAACAGGGATAACG 58.015 33.333 0.00 0.00 0.00 3.18
141 142 8.876181 TCCTCAATAATATCGAAAACAGGGATA 58.124 33.333 0.00 0.00 0.00 2.59
142 143 7.745717 TCCTCAATAATATCGAAAACAGGGAT 58.254 34.615 0.00 0.00 0.00 3.85
143 144 7.131907 TCCTCAATAATATCGAAAACAGGGA 57.868 36.000 0.00 0.00 0.00 4.20
144 145 7.801716 TTCCTCAATAATATCGAAAACAGGG 57.198 36.000 0.00 0.00 0.00 4.45
145 146 9.277783 AGATTCCTCAATAATATCGAAAACAGG 57.722 33.333 0.00 0.00 0.00 4.00
147 148 8.978539 CGAGATTCCTCAATAATATCGAAAACA 58.021 33.333 6.94 0.00 45.91 2.83
148 149 7.952637 GCGAGATTCCTCAATAATATCGAAAAC 59.047 37.037 14.74 0.00 45.91 2.43
149 150 7.872993 AGCGAGATTCCTCAATAATATCGAAAA 59.127 33.333 14.74 0.00 45.91 2.29
151 152 6.925211 AGCGAGATTCCTCAATAATATCGAA 58.075 36.000 14.74 0.00 45.91 3.71
152 153 6.516739 AGCGAGATTCCTCAATAATATCGA 57.483 37.500 14.74 0.00 45.91 3.59
153 154 7.543868 AGAAAGCGAGATTCCTCAATAATATCG 59.456 37.037 8.11 8.11 45.83 2.92
154 155 8.770438 AGAAAGCGAGATTCCTCAATAATATC 57.230 34.615 0.00 0.00 39.39 1.63
157 158 7.543868 CGATAGAAAGCGAGATTCCTCAATAAT 59.456 37.037 0.00 0.00 36.35 1.28
158 159 6.863645 CGATAGAAAGCGAGATTCCTCAATAA 59.136 38.462 0.00 0.00 36.35 1.40
160 161 5.226396 CGATAGAAAGCGAGATTCCTCAAT 58.774 41.667 0.00 0.00 36.35 2.57
162 163 3.551046 GCGATAGAAAGCGAGATTCCTCA 60.551 47.826 0.00 0.00 36.35 3.86
163 164 2.983803 GCGATAGAAAGCGAGATTCCTC 59.016 50.000 0.00 0.00 36.35 3.71
164 165 2.288518 GGCGATAGAAAGCGAGATTCCT 60.289 50.000 0.00 0.00 36.35 3.36
166 167 2.062519 GGGCGATAGAAAGCGAGATTC 58.937 52.381 0.00 0.00 36.35 2.52
167 168 1.270358 GGGGCGATAGAAAGCGAGATT 60.270 52.381 0.00 0.00 36.35 2.40
168 169 0.318762 GGGGCGATAGAAAGCGAGAT 59.681 55.000 0.00 0.00 36.35 2.75
170 171 0.319125 GAGGGGCGATAGAAAGCGAG 60.319 60.000 0.00 0.00 36.35 5.03
172 173 1.661821 CGAGGGGCGATAGAAAGCG 60.662 63.158 0.00 0.00 44.57 4.68
183 184 3.569200 AAGGGCAAGTTCGAGGGGC 62.569 63.158 0.00 0.00 0.00 5.80
185 186 4.303257 GAAGGGCAAGTTCGAGGG 57.697 61.111 0.00 0.00 0.00 4.30
190 191 3.431725 CCGGCGAAGGGCAAGTTC 61.432 66.667 9.30 0.00 46.16 3.01
198 199 2.536761 TAATGATAACCCGGCGAAGG 57.463 50.000 9.30 4.11 0.00 3.46
201 202 3.547054 ACTTTAATGATAACCCGGCGA 57.453 42.857 9.30 0.00 0.00 5.54
202 203 4.625972 AAACTTTAATGATAACCCGGCG 57.374 40.909 0.00 0.00 0.00 6.46
203 204 6.854778 TGTAAAACTTTAATGATAACCCGGC 58.145 36.000 0.00 0.00 0.00 6.13
204 205 7.482428 CGTTGTAAAACTTTAATGATAACCCGG 59.518 37.037 0.00 0.00 0.00 5.73
205 206 7.007636 GCGTTGTAAAACTTTAATGATAACCCG 59.992 37.037 0.00 0.00 0.00 5.28
206 207 7.808856 TGCGTTGTAAAACTTTAATGATAACCC 59.191 33.333 0.00 0.00 0.00 4.11
207 208 8.632551 GTGCGTTGTAAAACTTTAATGATAACC 58.367 33.333 0.00 0.00 0.00 2.85
208 209 9.389570 AGTGCGTTGTAAAACTTTAATGATAAC 57.610 29.630 0.00 0.00 0.00 1.89
209 210 9.601971 GAGTGCGTTGTAAAACTTTAATGATAA 57.398 29.630 0.00 0.00 0.00 1.75
210 211 8.995220 AGAGTGCGTTGTAAAACTTTAATGATA 58.005 29.630 0.00 0.00 0.00 2.15
211 212 7.871853 AGAGTGCGTTGTAAAACTTTAATGAT 58.128 30.769 0.00 0.00 0.00 2.45
213 214 7.149351 CGAAGAGTGCGTTGTAAAACTTTAATG 60.149 37.037 0.00 0.00 0.00 1.90
214 215 6.849305 CGAAGAGTGCGTTGTAAAACTTTAAT 59.151 34.615 0.00 0.00 0.00 1.40
215 216 6.183360 ACGAAGAGTGCGTTGTAAAACTTTAA 60.183 34.615 0.00 0.00 39.18 1.52
216 217 5.291614 ACGAAGAGTGCGTTGTAAAACTTTA 59.708 36.000 0.00 0.00 39.18 1.85
218 219 3.619929 ACGAAGAGTGCGTTGTAAAACTT 59.380 39.130 0.00 0.00 39.18 2.66
219 220 3.000925 CACGAAGAGTGCGTTGTAAAACT 59.999 43.478 0.00 0.00 44.72 2.66
220 221 3.277481 CACGAAGAGTGCGTTGTAAAAC 58.723 45.455 0.00 0.00 44.72 2.43
221 222 3.579147 CACGAAGAGTGCGTTGTAAAA 57.421 42.857 0.00 0.00 44.72 1.52
235 236 1.719780 GTACAACGCCTTCTCACGAAG 59.280 52.381 0.00 0.00 45.00 3.79
237 238 0.956633 AGTACAACGCCTTCTCACGA 59.043 50.000 0.00 0.00 0.00 4.35
238 239 1.060713 CAGTACAACGCCTTCTCACG 58.939 55.000 0.00 0.00 0.00 4.35
240 241 1.334160 TCCAGTACAACGCCTTCTCA 58.666 50.000 0.00 0.00 0.00 3.27
241 242 2.541556 GATCCAGTACAACGCCTTCTC 58.458 52.381 0.00 0.00 0.00 2.87
244 245 0.981183 TGGATCCAGTACAACGCCTT 59.019 50.000 11.44 0.00 0.00 4.35
246 247 1.583054 GATGGATCCAGTACAACGCC 58.417 55.000 21.33 0.00 0.00 5.68
257 258 4.533707 TCAGTCAGATAATGGGATGGATCC 59.466 45.833 4.20 4.20 46.41 3.36
258 259 5.752036 TCAGTCAGATAATGGGATGGATC 57.248 43.478 0.00 0.00 0.00 3.36
259 260 6.715350 ATTCAGTCAGATAATGGGATGGAT 57.285 37.500 0.00 0.00 0.00 3.41
260 261 7.072328 TGTTATTCAGTCAGATAATGGGATGGA 59.928 37.037 0.00 0.00 0.00 3.41
261 262 7.226441 TGTTATTCAGTCAGATAATGGGATGG 58.774 38.462 0.00 0.00 0.00 3.51
262 263 8.681486 TTGTTATTCAGTCAGATAATGGGATG 57.319 34.615 0.00 0.00 0.00 3.51
263 264 9.872684 AATTGTTATTCAGTCAGATAATGGGAT 57.127 29.630 0.00 0.00 0.00 3.85
287 288 9.420118 TGCTGAACATATGGGTCTAAATAAAAT 57.580 29.630 7.80 0.00 0.00 1.82
288 289 8.815565 TGCTGAACATATGGGTCTAAATAAAA 57.184 30.769 7.80 0.00 0.00 1.52
292 293 6.096846 GGTTTGCTGAACATATGGGTCTAAAT 59.903 38.462 7.80 0.00 40.13 1.40
293 294 5.417580 GGTTTGCTGAACATATGGGTCTAAA 59.582 40.000 7.80 5.35 40.13 1.85
294 295 4.947388 GGTTTGCTGAACATATGGGTCTAA 59.053 41.667 7.80 0.05 40.13 2.10
296 297 3.245229 TGGTTTGCTGAACATATGGGTCT 60.245 43.478 7.80 0.00 40.13 3.85
297 298 3.088532 TGGTTTGCTGAACATATGGGTC 58.911 45.455 7.80 4.76 40.13 4.46
298 299 3.168035 TGGTTTGCTGAACATATGGGT 57.832 42.857 7.80 0.00 40.13 4.51
300 301 6.042143 GGTTTATGGTTTGCTGAACATATGG 58.958 40.000 7.80 0.00 40.13 2.74
301 302 6.629128 TGGTTTATGGTTTGCTGAACATATG 58.371 36.000 0.00 0.00 40.13 1.78
302 303 6.849085 TGGTTTATGGTTTGCTGAACATAT 57.151 33.333 6.01 3.17 40.13 1.78
303 304 6.663093 AGATGGTTTATGGTTTGCTGAACATA 59.337 34.615 6.01 0.73 40.13 2.29
305 306 4.832266 AGATGGTTTATGGTTTGCTGAACA 59.168 37.500 6.01 0.00 40.13 3.18
306 307 5.391312 AGATGGTTTATGGTTTGCTGAAC 57.609 39.130 0.00 0.00 37.53 3.18
307 308 4.462483 GGAGATGGTTTATGGTTTGCTGAA 59.538 41.667 0.00 0.00 0.00 3.02
308 309 4.016444 GGAGATGGTTTATGGTTTGCTGA 58.984 43.478 0.00 0.00 0.00 4.26
309 310 3.763360 TGGAGATGGTTTATGGTTTGCTG 59.237 43.478 0.00 0.00 0.00 4.41
311 312 4.646492 AGATGGAGATGGTTTATGGTTTGC 59.354 41.667 0.00 0.00 0.00 3.68
312 313 6.125029 AGAGATGGAGATGGTTTATGGTTTG 58.875 40.000 0.00 0.00 0.00 2.93
314 315 5.983333 AGAGATGGAGATGGTTTATGGTT 57.017 39.130 0.00 0.00 0.00 3.67
315 316 6.146760 ACTAGAGATGGAGATGGTTTATGGT 58.853 40.000 0.00 0.00 0.00 3.55
318 319 6.465035 GGCAACTAGAGATGGAGATGGTTTAT 60.465 42.308 0.00 0.00 0.00 1.40
319 320 5.163301 GGCAACTAGAGATGGAGATGGTTTA 60.163 44.000 0.00 0.00 0.00 2.01
320 321 4.384647 GGCAACTAGAGATGGAGATGGTTT 60.385 45.833 0.00 0.00 0.00 3.27
323 324 2.702478 TGGCAACTAGAGATGGAGATGG 59.298 50.000 0.00 0.00 37.61 3.51
324 325 3.387374 AGTGGCAACTAGAGATGGAGATG 59.613 47.826 0.00 0.00 33.79 2.90
325 326 3.652055 AGTGGCAACTAGAGATGGAGAT 58.348 45.455 0.00 0.00 33.79 2.75
327 328 3.957497 AGTAGTGGCAACTAGAGATGGAG 59.043 47.826 0.00 0.00 39.60 3.86
328 329 3.954904 GAGTAGTGGCAACTAGAGATGGA 59.045 47.826 0.00 0.00 39.60 3.41
329 330 3.243234 CGAGTAGTGGCAACTAGAGATGG 60.243 52.174 0.00 0.00 39.60 3.51
331 332 3.628487 GTCGAGTAGTGGCAACTAGAGAT 59.372 47.826 0.00 0.00 39.60 2.75
332 333 3.008330 GTCGAGTAGTGGCAACTAGAGA 58.992 50.000 0.00 0.00 39.60 3.10
333 334 2.223066 CGTCGAGTAGTGGCAACTAGAG 60.223 54.545 0.00 0.00 39.60 2.43
334 335 1.736126 CGTCGAGTAGTGGCAACTAGA 59.264 52.381 0.00 0.00 39.60 2.43
335 336 1.467734 ACGTCGAGTAGTGGCAACTAG 59.532 52.381 0.00 0.00 39.60 2.57
336 337 1.198408 CACGTCGAGTAGTGGCAACTA 59.802 52.381 0.00 0.00 37.88 2.24
338 339 2.431539 CACGTCGAGTAGTGGCAAC 58.568 57.895 0.00 0.00 34.93 4.17
339 340 4.957266 CACGTCGAGTAGTGGCAA 57.043 55.556 0.00 0.00 34.93 4.52
414 415 2.892852 CCAAGGGAGATGAAACAGCAAA 59.107 45.455 0.00 0.00 0.00 3.68
526 1104 3.636300 TGCTTGATCTCTTCTAGAGCTCC 59.364 47.826 10.93 0.00 42.04 4.70
615 1202 6.754209 CAGTTTACAGCTAATCGATCAGTCTT 59.246 38.462 0.00 0.00 0.00 3.01
680 1267 2.353889 CAGCTCGGTCAAAATCCAGATG 59.646 50.000 0.00 0.00 0.00 2.90
719 1306 4.200283 GAGACGAGAGGCAGCCGG 62.200 72.222 5.55 0.00 46.78 6.13
720 1307 4.544689 CGAGACGAGAGGCAGCCG 62.545 72.222 5.55 0.00 46.78 5.52
721 1308 1.167155 TATCGAGACGAGAGGCAGCC 61.167 60.000 1.84 1.84 46.78 4.85
722 1309 0.878416 ATATCGAGACGAGAGGCAGC 59.122 55.000 0.00 0.00 46.78 5.25
723 1310 3.634568 AAATATCGAGACGAGAGGCAG 57.365 47.619 0.00 0.00 46.78 4.85
747 1334 8.112016 TGACATTTTCGGGTGTGAAATAAATA 57.888 30.769 0.00 0.00 37.66 1.40
838 1787 0.108945 GCTTGGAGTTGCTGAATGGC 60.109 55.000 0.00 0.00 0.00 4.40
847 1802 3.121030 CGGAGGCGCTTGGAGTTG 61.121 66.667 7.64 0.00 0.00 3.16
910 1875 2.202987 CGCCTTAGCTCAGCTGGG 60.203 66.667 10.31 12.70 40.10 4.45
1263 2235 2.669569 GAAAGCTGCTGGACGCCA 60.670 61.111 1.35 0.00 38.05 5.69
1394 2372 4.789075 GCACAGCGCCAATGCCAG 62.789 66.667 15.25 0.00 33.06 4.85
1425 2403 3.883744 AAACACCTGCTCTCCGGCG 62.884 63.158 0.00 0.00 34.52 6.46
1437 2415 2.061028 CTCGTACCACCGTAAAACACC 58.939 52.381 0.00 0.00 0.00 4.16
1441 2419 1.067635 GCTCCTCGTACCACCGTAAAA 60.068 52.381 0.00 0.00 0.00 1.52
1442 2420 0.527565 GCTCCTCGTACCACCGTAAA 59.472 55.000 0.00 0.00 0.00 2.01
1443 2421 0.322816 AGCTCCTCGTACCACCGTAA 60.323 55.000 0.00 0.00 0.00 3.18
1577 2561 1.473258 AACTTGCTGGTTCTGCAACA 58.527 45.000 7.87 0.00 41.83 3.33
1720 2709 7.936496 TTTTGTTATATGCATTCTCTGGTCA 57.064 32.000 3.54 0.00 0.00 4.02
1765 2754 7.989741 ATCTCAGTCAGATTTTACCATAGTTGG 59.010 37.037 0.00 0.00 43.29 3.77
1766 2755 8.954950 ATCTCAGTCAGATTTTACCATAGTTG 57.045 34.615 0.00 0.00 38.95 3.16
1767 2756 8.762645 TGATCTCAGTCAGATTTTACCATAGTT 58.237 33.333 0.00 0.00 42.48 2.24
1768 2757 8.311395 TGATCTCAGTCAGATTTTACCATAGT 57.689 34.615 0.00 0.00 42.48 2.12
1769 2758 8.815141 CTGATCTCAGTCAGATTTTACCATAG 57.185 38.462 0.00 0.00 46.77 2.23
1781 2770 4.388378 TGCATTCTCTGATCTCAGTCAG 57.612 45.455 7.07 0.00 45.51 3.51
1782 2771 6.667558 ATATGCATTCTCTGATCTCAGTCA 57.332 37.500 3.54 0.00 44.12 3.41
1783 2772 8.087136 TGTTATATGCATTCTCTGATCTCAGTC 58.913 37.037 3.54 0.00 44.12 3.51
1784 2773 7.960262 TGTTATATGCATTCTCTGATCTCAGT 58.040 34.615 3.54 0.00 44.12 3.41
1785 2774 8.828688 TTGTTATATGCATTCTCTGATCTCAG 57.171 34.615 3.54 0.56 45.08 3.35
1786 2775 9.617523 TTTTGTTATATGCATTCTCTGATCTCA 57.382 29.630 3.54 0.00 0.00 3.27
1869 2858 3.057019 TGAAGTTGAAGATCGTTGTCGG 58.943 45.455 0.00 0.00 37.69 4.79
1871 2860 4.848299 GCAATGAAGTTGAAGATCGTTGTC 59.152 41.667 11.44 3.90 40.51 3.18
1878 2867 2.489329 CACCGGCAATGAAGTTGAAGAT 59.511 45.455 0.00 0.00 40.37 2.40
1900 2889 4.440112 GGCGATTCCAGGTTTTATCAAAGG 60.440 45.833 0.00 0.00 34.01 3.11
1921 2910 2.034179 GTGTTGTTTTGGAGTACCTGGC 59.966 50.000 0.00 0.00 37.04 4.85
1924 2913 4.142038 GGATGTGTTGTTTTGGAGTACCT 58.858 43.478 0.00 0.00 37.04 3.08
1928 2917 4.277476 TCTTGGATGTGTTGTTTTGGAGT 58.723 39.130 0.00 0.00 0.00 3.85
1965 2954 1.441729 CCGCTCACCGTGGACATAT 59.558 57.895 0.00 0.00 46.58 1.78
1975 2964 1.393883 GTTTTCTCGAATCCGCTCACC 59.606 52.381 0.00 0.00 35.37 4.02
1988 2977 5.293569 TGAAGACGACTTTTGGAGTTTTCTC 59.706 40.000 0.83 0.00 39.19 2.87
1995 2984 2.833794 TGGTGAAGACGACTTTTGGAG 58.166 47.619 0.83 0.00 36.39 3.86
2002 2991 3.869065 TGTTTTCTTGGTGAAGACGACT 58.131 40.909 0.00 0.00 41.15 4.18
2003 2992 4.609691 TTGTTTTCTTGGTGAAGACGAC 57.390 40.909 0.00 0.00 41.15 4.34
2008 2997 4.687483 GGATGCATTGTTTTCTTGGTGAAG 59.313 41.667 0.00 0.00 35.89 3.02
2030 3019 2.028190 CGTAGGAGGCATGCTCGG 59.972 66.667 18.92 0.00 0.00 4.63
2056 3045 3.564225 GGACGAGGACAAACATGAGTTTT 59.436 43.478 0.00 0.00 45.32 2.43
2082 3071 2.516227 ACCAGTCAAGATCGAGGAGA 57.484 50.000 0.00 0.00 0.00 3.71
2096 3085 3.401032 CTGGGGTAGAGGAACCAGT 57.599 57.895 0.00 0.00 44.21 4.00
2122 3111 4.570663 GAGTGGCGATCGTCGGGG 62.571 72.222 15.94 0.00 40.84 5.73
2128 3117 1.588403 CTGCTCAGAGTGGCGATCG 60.588 63.158 11.69 11.69 0.00 3.69
2173 3162 3.500448 TTGACCTGGTGTTCTATGCAA 57.500 42.857 2.82 0.00 0.00 4.08
2178 3167 5.319043 AGGATTTTTGACCTGGTGTTCTA 57.681 39.130 2.82 0.00 34.99 2.10
2198 3187 9.057089 GTATGGATAACTGTATGAAGGAAAAGG 57.943 37.037 0.00 0.00 0.00 3.11
2199 3188 9.613428 TGTATGGATAACTGTATGAAGGAAAAG 57.387 33.333 0.00 0.00 0.00 2.27
2244 3237 4.243270 ACGTATGCTTTTCACCTACAGTC 58.757 43.478 0.00 0.00 0.00 3.51
2246 3239 4.242475 TGACGTATGCTTTTCACCTACAG 58.758 43.478 0.00 0.00 0.00 2.74
2251 3244 3.250040 ACAACTGACGTATGCTTTTCACC 59.750 43.478 0.00 0.00 0.00 4.02
2259 3252 3.001330 GGCAATCTACAACTGACGTATGC 59.999 47.826 0.00 0.00 0.00 3.14
2269 3262 3.255642 ACAACCATGTGGCAATCTACAAC 59.744 43.478 0.00 0.00 38.69 3.32
2277 3270 2.499289 AGTGAAAACAACCATGTGGCAA 59.501 40.909 0.00 0.00 40.46 4.52
2318 3316 2.656069 GCTAGGGTGGAGGCGTTCA 61.656 63.158 0.00 0.00 0.00 3.18
2323 3321 1.995626 TTGGAGCTAGGGTGGAGGC 60.996 63.158 0.00 0.00 0.00 4.70
2325 3323 0.618968 AGGTTGGAGCTAGGGTGGAG 60.619 60.000 0.00 0.00 0.00 3.86
2344 3342 2.230508 ACCTCGCTCTTGTCGATAACAA 59.769 45.455 0.00 0.00 45.60 2.83
2361 3359 4.304537 GGTAACCTAGAACGATGACCTC 57.695 50.000 0.00 0.00 0.00 3.85
2377 3375 0.690762 TTGGTCCTCAGCAGGGTAAC 59.309 55.000 0.00 0.00 40.80 2.50
2378 3376 0.690762 GTTGGTCCTCAGCAGGGTAA 59.309 55.000 0.00 0.00 40.80 2.85
2379 3377 0.472925 TGTTGGTCCTCAGCAGGGTA 60.473 55.000 0.00 0.00 40.80 3.69
2380 3378 1.770110 TGTTGGTCCTCAGCAGGGT 60.770 57.895 0.00 0.00 40.80 4.34
2381 3379 1.002868 CTGTTGGTCCTCAGCAGGG 60.003 63.158 2.59 0.00 46.64 4.45
2382 3380 4.709840 CTGTTGGTCCTCAGCAGG 57.290 61.111 2.59 0.00 46.64 4.85
2384 3382 0.471780 TCCTCTGTTGGTCCTCAGCA 60.472 55.000 8.96 0.00 35.32 4.41
2385 3383 0.908198 ATCCTCTGTTGGTCCTCAGC 59.092 55.000 8.96 0.00 0.00 4.26
2386 3384 2.938756 GCAATCCTCTGTTGGTCCTCAG 60.939 54.545 7.89 7.89 0.00 3.35
2387 3385 1.003580 GCAATCCTCTGTTGGTCCTCA 59.996 52.381 0.00 0.00 0.00 3.86
2388 3386 1.743996 GCAATCCTCTGTTGGTCCTC 58.256 55.000 0.00 0.00 0.00 3.71
2389 3387 0.036010 CGCAATCCTCTGTTGGTCCT 60.036 55.000 0.00 0.00 0.00 3.85
2390 3388 1.026718 CCGCAATCCTCTGTTGGTCC 61.027 60.000 0.00 0.00 0.00 4.46
2391 3389 0.036388 TCCGCAATCCTCTGTTGGTC 60.036 55.000 0.00 0.00 0.00 4.02
2392 3390 0.620556 ATCCGCAATCCTCTGTTGGT 59.379 50.000 0.00 0.00 0.00 3.67
2393 3391 2.620251 TATCCGCAATCCTCTGTTGG 57.380 50.000 0.00 0.00 0.00 3.77
2394 3392 4.384056 AGATTATCCGCAATCCTCTGTTG 58.616 43.478 0.00 0.00 35.85 3.33
2395 3393 4.101585 TGAGATTATCCGCAATCCTCTGTT 59.898 41.667 0.00 0.00 35.85 3.16
2396 3394 3.643320 TGAGATTATCCGCAATCCTCTGT 59.357 43.478 0.00 0.00 35.85 3.41
2397 3395 4.263018 TGAGATTATCCGCAATCCTCTG 57.737 45.455 0.00 0.00 35.85 3.35
2398 3396 4.963318 TTGAGATTATCCGCAATCCTCT 57.037 40.909 0.00 0.00 35.85 3.69
2399 3397 5.618640 GCAATTGAGATTATCCGCAATCCTC 60.619 44.000 10.34 0.00 35.85 3.71
2400 3398 4.217118 GCAATTGAGATTATCCGCAATCCT 59.783 41.667 10.34 0.00 35.85 3.24
2401 3399 4.022935 TGCAATTGAGATTATCCGCAATCC 60.023 41.667 10.34 6.68 35.85 3.01
2402 3400 5.112220 TGCAATTGAGATTATCCGCAATC 57.888 39.130 10.34 2.58 35.53 2.67
2403 3401 4.022589 CCTGCAATTGAGATTATCCGCAAT 60.023 41.667 10.34 5.45 32.75 3.56
2404 3402 3.316029 CCTGCAATTGAGATTATCCGCAA 59.684 43.478 10.34 1.61 0.00 4.85
2405 3403 2.880268 CCTGCAATTGAGATTATCCGCA 59.120 45.455 10.34 0.00 0.00 5.69
2406 3404 2.351157 GCCTGCAATTGAGATTATCCGC 60.351 50.000 10.34 0.00 0.00 5.54
2407 3405 3.144506 AGCCTGCAATTGAGATTATCCG 58.855 45.455 10.34 0.00 0.00 4.18
2408 3406 5.532406 TGTTAGCCTGCAATTGAGATTATCC 59.468 40.000 10.34 0.00 0.00 2.59
2409 3407 6.624352 TGTTAGCCTGCAATTGAGATTATC 57.376 37.500 10.34 0.00 0.00 1.75
2410 3408 6.208204 GGATGTTAGCCTGCAATTGAGATTAT 59.792 38.462 10.34 0.00 0.00 1.28
2411 3409 5.532406 GGATGTTAGCCTGCAATTGAGATTA 59.468 40.000 10.34 0.00 0.00 1.75
2412 3410 4.340381 GGATGTTAGCCTGCAATTGAGATT 59.660 41.667 10.34 0.00 0.00 2.40
2413 3411 3.887716 GGATGTTAGCCTGCAATTGAGAT 59.112 43.478 10.34 0.00 0.00 2.75
2414 3412 3.054139 AGGATGTTAGCCTGCAATTGAGA 60.054 43.478 10.34 0.00 33.59 3.27
2415 3413 3.285484 AGGATGTTAGCCTGCAATTGAG 58.715 45.455 10.34 3.86 33.59 3.02
2416 3414 3.370840 AGGATGTTAGCCTGCAATTGA 57.629 42.857 10.34 0.00 33.59 2.57
2417 3415 3.181483 GGAAGGATGTTAGCCTGCAATTG 60.181 47.826 0.00 0.00 35.50 2.32
2418 3416 3.026694 GGAAGGATGTTAGCCTGCAATT 58.973 45.455 0.00 0.00 35.50 2.32
2419 3417 2.659428 GGAAGGATGTTAGCCTGCAAT 58.341 47.619 0.00 0.00 35.50 3.56
2420 3418 1.340991 GGGAAGGATGTTAGCCTGCAA 60.341 52.381 0.00 0.00 35.50 4.08
2421 3419 0.255890 GGGAAGGATGTTAGCCTGCA 59.744 55.000 0.00 0.00 35.50 4.41
2422 3420 0.466372 GGGGAAGGATGTTAGCCTGC 60.466 60.000 0.00 0.00 35.50 4.85
2423 3421 0.918983 TGGGGAAGGATGTTAGCCTG 59.081 55.000 0.00 0.00 35.50 4.85
2424 3422 1.912862 ATGGGGAAGGATGTTAGCCT 58.087 50.000 0.00 0.00 37.35 4.58
2425 3423 2.755952 AATGGGGAAGGATGTTAGCC 57.244 50.000 0.00 0.00 0.00 3.93
2426 3424 4.164843 TGTAATGGGGAAGGATGTTAGC 57.835 45.455 0.00 0.00 0.00 3.09
2427 3425 7.079451 AGTATGTAATGGGGAAGGATGTTAG 57.921 40.000 0.00 0.00 0.00 2.34
2428 3426 7.287061 CAAGTATGTAATGGGGAAGGATGTTA 58.713 38.462 0.00 0.00 0.00 2.41
2429 3427 5.994416 AGTATGTAATGGGGAAGGATGTT 57.006 39.130 0.00 0.00 0.00 2.71
2430 3428 5.399038 CCAAGTATGTAATGGGGAAGGATGT 60.399 44.000 0.00 0.00 0.00 3.06
2431 3429 5.072741 CCAAGTATGTAATGGGGAAGGATG 58.927 45.833 0.00 0.00 0.00 3.51
2432 3430 5.324832 CCAAGTATGTAATGGGGAAGGAT 57.675 43.478 0.00 0.00 0.00 3.24
2433 3431 4.788925 CCAAGTATGTAATGGGGAAGGA 57.211 45.455 0.00 0.00 0.00 3.36
2440 3438 3.157087 GGCATCCCCAAGTATGTAATGG 58.843 50.000 0.00 0.00 0.00 3.16
2441 3439 2.813754 CGGCATCCCCAAGTATGTAATG 59.186 50.000 0.00 0.00 0.00 1.90
2442 3440 2.441750 ACGGCATCCCCAAGTATGTAAT 59.558 45.455 0.00 0.00 0.00 1.89
2443 3441 1.841277 ACGGCATCCCCAAGTATGTAA 59.159 47.619 0.00 0.00 0.00 2.41
2444 3442 1.502690 ACGGCATCCCCAAGTATGTA 58.497 50.000 0.00 0.00 0.00 2.29
2445 3443 0.623723 AACGGCATCCCCAAGTATGT 59.376 50.000 0.00 0.00 0.00 2.29
2446 3444 1.024271 CAACGGCATCCCCAAGTATG 58.976 55.000 0.00 0.00 0.00 2.39
2447 3445 0.106719 CCAACGGCATCCCCAAGTAT 60.107 55.000 0.00 0.00 0.00 2.12
2448 3446 1.301623 CCAACGGCATCCCCAAGTA 59.698 57.895 0.00 0.00 0.00 2.24
2449 3447 2.035626 CCAACGGCATCCCCAAGT 59.964 61.111 0.00 0.00 0.00 3.16
2460 3458 1.734465 GATCTTTGAGTCTGCCAACGG 59.266 52.381 0.00 0.00 0.00 4.44
2461 3459 1.734465 GGATCTTTGAGTCTGCCAACG 59.266 52.381 0.00 0.00 0.00 4.10
2462 3460 2.746362 CAGGATCTTTGAGTCTGCCAAC 59.254 50.000 0.00 0.00 0.00 3.77
2463 3461 2.639347 TCAGGATCTTTGAGTCTGCCAA 59.361 45.455 0.00 0.00 0.00 4.52
2464 3462 2.027745 GTCAGGATCTTTGAGTCTGCCA 60.028 50.000 0.00 0.00 0.00 4.92
2465 3463 2.027745 TGTCAGGATCTTTGAGTCTGCC 60.028 50.000 0.00 0.00 0.00 4.85
2466 3464 3.325293 TGTCAGGATCTTTGAGTCTGC 57.675 47.619 0.00 0.00 0.00 4.26
2467 3465 4.689812 CACTTGTCAGGATCTTTGAGTCTG 59.310 45.833 0.00 0.00 0.00 3.51
2468 3466 4.802248 GCACTTGTCAGGATCTTTGAGTCT 60.802 45.833 0.00 0.00 0.00 3.24
2469 3467 3.434984 GCACTTGTCAGGATCTTTGAGTC 59.565 47.826 0.00 0.00 0.00 3.36
2470 3468 3.181451 TGCACTTGTCAGGATCTTTGAGT 60.181 43.478 0.00 0.00 0.00 3.41
2471 3469 3.405831 TGCACTTGTCAGGATCTTTGAG 58.594 45.455 0.00 0.00 0.00 3.02
2472 3470 3.490439 TGCACTTGTCAGGATCTTTGA 57.510 42.857 0.00 0.00 0.00 2.69
2473 3471 4.670992 CGAATGCACTTGTCAGGATCTTTG 60.671 45.833 0.00 0.00 0.00 2.77
2474 3472 3.438087 CGAATGCACTTGTCAGGATCTTT 59.562 43.478 0.00 0.00 0.00 2.52
2475 3473 3.005554 CGAATGCACTTGTCAGGATCTT 58.994 45.455 0.00 0.00 0.00 2.40
2476 3474 2.234661 TCGAATGCACTTGTCAGGATCT 59.765 45.455 0.00 0.00 0.00 2.75
2477 3475 2.349886 GTCGAATGCACTTGTCAGGATC 59.650 50.000 0.00 0.00 0.00 3.36
2478 3476 2.350522 GTCGAATGCACTTGTCAGGAT 58.649 47.619 0.00 0.00 0.00 3.24
2479 3477 1.608025 GGTCGAATGCACTTGTCAGGA 60.608 52.381 0.00 0.00 0.00 3.86
2480 3478 0.798776 GGTCGAATGCACTTGTCAGG 59.201 55.000 0.00 0.00 0.00 3.86
2481 3479 0.798776 GGGTCGAATGCACTTGTCAG 59.201 55.000 0.00 0.00 0.00 3.51
2482 3480 0.948623 CGGGTCGAATGCACTTGTCA 60.949 55.000 0.00 0.00 0.00 3.58
2483 3481 1.787847 CGGGTCGAATGCACTTGTC 59.212 57.895 0.00 0.00 0.00 3.18
2484 3482 2.325082 GCGGGTCGAATGCACTTGT 61.325 57.895 0.00 0.00 0.00 3.16
2485 3483 0.739462 TAGCGGGTCGAATGCACTTG 60.739 55.000 7.43 0.00 0.00 3.16
2486 3484 0.460284 CTAGCGGGTCGAATGCACTT 60.460 55.000 7.43 0.00 0.00 3.16
2487 3485 1.141881 CTAGCGGGTCGAATGCACT 59.858 57.895 7.43 0.00 0.00 4.40
2488 3486 1.153628 ACTAGCGGGTCGAATGCAC 60.154 57.895 7.43 0.00 0.00 4.57
2489 3487 1.153647 CACTAGCGGGTCGAATGCA 60.154 57.895 7.43 0.00 0.00 3.96
2490 3488 1.883084 CCACTAGCGGGTCGAATGC 60.883 63.158 0.00 0.00 0.00 3.56
2491 3489 1.227263 CCCACTAGCGGGTCGAATG 60.227 63.158 7.76 0.00 41.83 2.67
2492 3490 3.217231 CCCACTAGCGGGTCGAAT 58.783 61.111 7.76 0.00 41.83 3.34
2499 3497 4.143333 CACCCGTCCCACTAGCGG 62.143 72.222 0.00 0.00 44.55 5.52
2500 3498 4.143333 CCACCCGTCCCACTAGCG 62.143 72.222 0.00 0.00 0.00 4.26
2501 3499 4.468689 GCCACCCGTCCCACTAGC 62.469 72.222 0.00 0.00 0.00 3.42
2502 3500 3.782443 GGCCACCCGTCCCACTAG 61.782 72.222 0.00 0.00 0.00 2.57
2503 3501 4.326227 AGGCCACCCGTCCCACTA 62.326 66.667 5.01 0.00 35.76 2.74
2525 3523 2.266055 CCTCGCCAGGTCTCAACC 59.734 66.667 0.00 0.00 46.87 3.77
2526 3524 1.079750 GTCCTCGCCAGGTCTCAAC 60.080 63.158 0.00 0.00 41.28 3.18
2527 3525 2.636412 CGTCCTCGCCAGGTCTCAA 61.636 63.158 0.00 0.00 41.28 3.02
2528 3526 3.062466 CGTCCTCGCCAGGTCTCA 61.062 66.667 0.00 0.00 41.28 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.