Multiple sequence alignment - TraesCS1B01G271200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G271200 chr1B 100.000 4431 0 0 596 5026 476883361 476878931 0.000000e+00 8183.0
1 TraesCS1B01G271200 chr1B 100.000 184 0 0 1 184 476883956 476883773 1.730000e-89 340.0
2 TraesCS1B01G271200 chr1B 96.739 184 6 0 1 184 547531483 547531300 1.760000e-79 307.0
3 TraesCS1B01G271200 chr1B 89.401 217 14 5 4683 4897 476912232 476912023 1.070000e-66 265.0
4 TraesCS1B01G271200 chr1B 84.106 151 5 8 4889 5026 476911975 476911831 1.470000e-25 128.0
5 TraesCS1B01G271200 chr1B 79.381 97 14 5 795 888 31122805 31122898 4.200000e-06 63.9
6 TraesCS1B01G271200 chr1A 94.094 2438 92 22 982 3393 454527104 454524693 0.000000e+00 3657.0
7 TraesCS1B01G271200 chr1A 92.009 438 29 6 3356 3792 454524693 454524261 1.200000e-170 610.0
8 TraesCS1B01G271200 chr1A 91.257 366 15 4 4675 5026 454529218 454528856 2.720000e-132 483.0
9 TraesCS1B01G271200 chr1A 89.779 362 12 12 4680 5026 454523615 454523264 1.660000e-119 440.0
10 TraesCS1B01G271200 chr1A 88.446 251 20 6 3871 4115 454524272 454524025 1.370000e-75 294.0
11 TraesCS1B01G271200 chr1A 92.727 55 3 1 908 962 454527158 454527105 1.500000e-10 78.7
12 TraesCS1B01G271200 chr1A 93.750 48 3 0 4631 4678 454523705 454523658 6.980000e-09 73.1
13 TraesCS1B01G271200 chr1D 95.386 2059 78 4 1064 3114 355083263 355081214 0.000000e+00 3260.0
14 TraesCS1B01G271200 chr1D 89.216 714 46 11 3356 4042 355080845 355080136 0.000000e+00 863.0
15 TraesCS1B01G271200 chr1D 94.097 288 10 4 3113 3393 355081132 355080845 1.000000e-116 431.0
16 TraesCS1B01G271200 chr1D 88.950 362 19 10 4675 5026 355079728 355079378 1.290000e-115 427.0
17 TraesCS1B01G271200 chr1D 86.413 368 24 15 4675 5026 355086343 355085986 3.670000e-101 379.0
18 TraesCS1B01G271200 chr6A 84.483 3203 384 69 971 4108 551102291 551105445 0.000000e+00 3057.0
19 TraesCS1B01G271200 chr6A 77.113 1136 207 36 1105 2211 52039014 52037903 4.300000e-170 608.0
20 TraesCS1B01G271200 chr6A 78.897 526 85 19 3428 3947 5036312 5036817 2.900000e-87 333.0
21 TraesCS1B01G271200 chr6A 83.000 300 39 8 2461 2756 5035899 5036190 1.390000e-65 261.0
22 TraesCS1B01G271200 chr6A 72.886 745 166 30 1489 2205 5062878 5063614 1.820000e-54 224.0
23 TraesCS1B01G271200 chr6D 84.983 2910 346 54 971 3835 404607412 404610275 0.000000e+00 2868.0
24 TraesCS1B01G271200 chr6D 74.700 1668 305 79 1105 2723 41545288 41543689 7.100000e-178 634.0
25 TraesCS1B01G271200 chr4D 77.787 1184 231 24 1098 2270 73997970 73996808 0.000000e+00 701.0
26 TraesCS1B01G271200 chr4B 77.174 1196 235 28 1098 2279 106060284 106059113 0.000000e+00 662.0
27 TraesCS1B01G271200 chr4B 73.827 1471 319 50 1098 2534 106049375 106047937 1.600000e-144 523.0
28 TraesCS1B01G271200 chr4B 90.604 298 24 1 596 889 552012951 552013248 4.720000e-105 392.0
29 TraesCS1B01G271200 chr4B 95.628 183 8 0 1 183 552012666 552012848 1.370000e-75 294.0
30 TraesCS1B01G271200 chr4A 76.294 1198 252 21 1086 2270 514341533 514342711 1.200000e-170 610.0
31 TraesCS1B01G271200 chr4A 89.384 292 28 2 596 886 744444425 744444136 1.030000e-96 364.0
32 TraesCS1B01G271200 chr5B 91.468 293 21 3 596 886 658929447 658929157 2.820000e-107 399.0
33 TraesCS1B01G271200 chr5B 91.156 294 22 3 596 887 541127155 541127446 3.650000e-106 396.0
34 TraesCS1B01G271200 chr5B 77.778 540 92 19 3415 3947 576551823 576552341 1.760000e-79 307.0
35 TraesCS1B01G271200 chr5B 96.175 183 7 0 1 183 541126485 541126667 2.940000e-77 300.0
36 TraesCS1B01G271200 chr5B 96.629 178 6 0 6 183 658929718 658929541 3.800000e-76 296.0
37 TraesCS1B01G271200 chr5B 80.563 355 42 15 2461 2800 576550977 576551319 1.080000e-61 248.0
38 TraesCS1B01G271200 chr6B 90.722 291 27 0 596 886 683125311 683125021 6.100000e-104 388.0
39 TraesCS1B01G271200 chr6B 93.522 247 16 0 596 842 571743872 571743626 7.950000e-98 368.0
40 TraesCS1B01G271200 chr2B 90.169 295 25 3 596 888 769007030 769006738 1.020000e-101 381.0
41 TraesCS1B01G271200 chr2B 97.222 180 5 0 3 182 676175056 676174877 6.320000e-79 305.0
42 TraesCS1B01G271200 chr2B 96.175 183 7 0 1 183 769007316 769007134 2.940000e-77 300.0
43 TraesCS1B01G271200 chr2B 96.648 179 6 0 1 179 67173397 67173219 1.060000e-76 298.0
44 TraesCS1B01G271200 chr3B 89.420 293 27 3 596 886 736159168 736158878 2.860000e-97 366.0
45 TraesCS1B01G271200 chr3B 96.154 182 6 1 3 183 708751721 708751540 3.800000e-76 296.0
46 TraesCS1B01G271200 chr3B 95.628 183 8 0 1 183 46778336 46778518 1.370000e-75 294.0
47 TraesCS1B01G271200 chr7B 92.742 248 16 2 596 842 637750622 637750868 1.720000e-94 357.0
48 TraesCS1B01G271200 chrUn 74.953 527 111 11 1768 2281 137663247 137663765 6.550000e-54 222.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G271200 chr1B 476878931 476883956 5025 True 4261.500000 8183 100.000000 1 5026 2 chr1B.!!$R2 5025
1 TraesCS1B01G271200 chr1A 454523264 454529218 5954 True 805.114286 3657 91.723143 908 5026 7 chr1A.!!$R1 4118
2 TraesCS1B01G271200 chr1D 355079378 355086343 6965 True 1072.000000 3260 90.812400 1064 5026 5 chr1D.!!$R1 3962
3 TraesCS1B01G271200 chr6A 551102291 551105445 3154 False 3057.000000 3057 84.483000 971 4108 1 chr6A.!!$F2 3137
4 TraesCS1B01G271200 chr6A 52037903 52039014 1111 True 608.000000 608 77.113000 1105 2211 1 chr6A.!!$R1 1106
5 TraesCS1B01G271200 chr6A 5035899 5036817 918 False 297.000000 333 80.948500 2461 3947 2 chr6A.!!$F3 1486
6 TraesCS1B01G271200 chr6A 5062878 5063614 736 False 224.000000 224 72.886000 1489 2205 1 chr6A.!!$F1 716
7 TraesCS1B01G271200 chr6D 404607412 404610275 2863 False 2868.000000 2868 84.983000 971 3835 1 chr6D.!!$F1 2864
8 TraesCS1B01G271200 chr6D 41543689 41545288 1599 True 634.000000 634 74.700000 1105 2723 1 chr6D.!!$R1 1618
9 TraesCS1B01G271200 chr4D 73996808 73997970 1162 True 701.000000 701 77.787000 1098 2270 1 chr4D.!!$R1 1172
10 TraesCS1B01G271200 chr4B 106059113 106060284 1171 True 662.000000 662 77.174000 1098 2279 1 chr4B.!!$R2 1181
11 TraesCS1B01G271200 chr4B 106047937 106049375 1438 True 523.000000 523 73.827000 1098 2534 1 chr4B.!!$R1 1436
12 TraesCS1B01G271200 chr4B 552012666 552013248 582 False 343.000000 392 93.116000 1 889 2 chr4B.!!$F1 888
13 TraesCS1B01G271200 chr4A 514341533 514342711 1178 False 610.000000 610 76.294000 1086 2270 1 chr4A.!!$F1 1184
14 TraesCS1B01G271200 chr5B 541126485 541127446 961 False 348.000000 396 93.665500 1 887 2 chr5B.!!$F1 886
15 TraesCS1B01G271200 chr5B 658929157 658929718 561 True 347.500000 399 94.048500 6 886 2 chr5B.!!$R1 880
16 TraesCS1B01G271200 chr5B 576550977 576552341 1364 False 277.500000 307 79.170500 2461 3947 2 chr5B.!!$F2 1486
17 TraesCS1B01G271200 chr2B 769006738 769007316 578 True 340.500000 381 93.172000 1 888 2 chr2B.!!$R3 887
18 TraesCS1B01G271200 chrUn 137663247 137663765 518 False 222.000000 222 74.953000 1768 2281 1 chrUn.!!$F1 513

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
962 2115 0.175760 TCTATTGAGCGAGGCCACAC 59.824 55.0 5.01 0.0 0.00 3.82 F
1022 2175 0.241213 CCGTCTCACTCGCTTCTTCA 59.759 55.0 0.00 0.0 0.00 3.02 F
2138 4254 0.539669 TCAAGTCAGGGCGAGTCAGA 60.540 55.0 0.00 0.0 0.00 3.27 F
2466 4634 0.101040 ATGCATTGGTCGAATTGCGG 59.899 50.0 0.00 0.0 41.33 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2138 4254 1.074775 TGCGGGCTCATCAACCTTT 59.925 52.632 0.00 0.0 0.00 3.11 R
2244 4371 3.187637 GCAAACATACAGAAGCCGTAACA 59.812 43.478 0.00 0.0 0.00 2.41 R
3914 6374 0.031585 TTCGACACGAGAACCACTGG 59.968 55.000 0.00 0.0 37.14 4.00 R
4235 6962 0.030369 GATCACCGGGTAGTAGTGCG 59.970 60.000 6.32 0.0 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 2.806244 GGCAACTACGAAGACACACAAT 59.194 45.455 0.00 0.00 0.00 2.71
80 81 5.599656 TCCATGTAGTGTATTACCCCTGTAC 59.400 44.000 0.00 0.00 0.00 2.90
183 184 2.685388 GGAGATTCACCTGCTTTTAGCC 59.315 50.000 0.00 0.00 41.51 3.93
730 810 4.106925 GGGCTGCTGGGTCCTCTG 62.107 72.222 0.00 0.00 0.00 3.35
762 842 4.379174 ACGGAGTTGCCACACATC 57.621 55.556 0.00 0.00 37.78 3.06
763 843 1.667830 ACGGAGTTGCCACACATCG 60.668 57.895 0.00 0.00 37.78 3.84
766 846 1.298859 GGAGTTGCCACACATCGGAC 61.299 60.000 0.00 0.00 36.34 4.79
767 847 1.626654 GAGTTGCCACACATCGGACG 61.627 60.000 0.00 0.00 0.00 4.79
768 848 1.959226 GTTGCCACACATCGGACGT 60.959 57.895 0.00 0.00 0.00 4.34
770 850 3.788766 GCCACACATCGGACGTGC 61.789 66.667 3.82 0.00 37.93 5.34
771 851 3.478394 CCACACATCGGACGTGCG 61.478 66.667 24.40 24.40 37.93 5.34
772 852 3.478394 CACACATCGGACGTGCGG 61.478 66.667 29.10 16.46 37.93 5.69
773 853 4.735132 ACACATCGGACGTGCGGG 62.735 66.667 29.10 22.51 37.93 6.13
817 897 1.743995 GTCGTGCGGGCTGGTTATT 60.744 57.895 0.00 0.00 0.00 1.40
818 898 1.743623 TCGTGCGGGCTGGTTATTG 60.744 57.895 0.00 0.00 0.00 1.90
819 899 2.038269 CGTGCGGGCTGGTTATTGT 61.038 57.895 0.00 0.00 0.00 2.71
820 900 1.800681 GTGCGGGCTGGTTATTGTC 59.199 57.895 0.00 0.00 0.00 3.18
822 902 1.377987 GCGGGCTGGTTATTGTCCA 60.378 57.895 0.00 0.00 0.00 4.02
826 906 0.746659 GGCTGGTTATTGTCCATGCC 59.253 55.000 0.00 0.00 39.76 4.40
830 910 2.164219 CTGGTTATTGTCCATGCCACAC 59.836 50.000 0.00 0.00 34.26 3.82
831 911 1.132262 GGTTATTGTCCATGCCACACG 59.868 52.381 0.00 0.00 0.00 4.49
832 912 2.080693 GTTATTGTCCATGCCACACGA 58.919 47.619 0.00 0.00 0.00 4.35
833 913 2.022764 TATTGTCCATGCCACACGAG 57.977 50.000 0.00 0.00 0.00 4.18
834 914 0.677731 ATTGTCCATGCCACACGAGG 60.678 55.000 0.00 0.00 0.00 4.63
854 934 3.479269 CGCGGGCGAGTTTCTGTC 61.479 66.667 7.38 0.00 42.83 3.51
860 940 1.648467 GGCGAGTTTCTGTCCATGCC 61.648 60.000 0.00 0.00 0.00 4.40
861 941 0.955428 GCGAGTTTCTGTCCATGCCA 60.955 55.000 0.00 0.00 0.00 4.92
863 943 1.877680 CGAGTTTCTGTCCATGCCACA 60.878 52.381 0.00 0.00 0.00 4.17
864 944 1.537202 GAGTTTCTGTCCATGCCACAC 59.463 52.381 0.00 0.00 0.00 3.82
866 946 0.179032 TTTCTGTCCATGCCACACGT 60.179 50.000 0.00 0.00 0.00 4.49
868 948 1.597854 CTGTCCATGCCACACGTGT 60.598 57.895 17.22 17.22 33.01 4.49
884 964 2.159282 ACGTGTGACAGTTATCGGGATC 60.159 50.000 0.00 0.00 0.00 3.36
885 965 2.798499 CGTGTGACAGTTATCGGGATCC 60.798 54.545 1.92 1.92 0.00 3.36
886 966 2.431057 GTGTGACAGTTATCGGGATCCT 59.569 50.000 12.58 0.00 0.00 3.24
889 969 3.890147 GTGACAGTTATCGGGATCCTAGT 59.110 47.826 12.58 0.01 0.00 2.57
890 970 3.889538 TGACAGTTATCGGGATCCTAGTG 59.110 47.826 12.58 7.92 0.00 2.74
891 971 4.142790 GACAGTTATCGGGATCCTAGTGA 58.857 47.826 12.58 5.39 0.00 3.41
892 972 4.742012 ACAGTTATCGGGATCCTAGTGAT 58.258 43.478 12.58 12.17 36.01 3.06
893 973 5.148502 ACAGTTATCGGGATCCTAGTGATT 58.851 41.667 12.58 0.00 32.41 2.57
895 975 5.478679 CAGTTATCGGGATCCTAGTGATTCT 59.521 44.000 12.58 9.14 32.41 2.40
897 977 3.314307 TCGGGATCCTAGTGATTCTGT 57.686 47.619 12.58 0.00 36.77 3.41
899 979 4.999310 TCGGGATCCTAGTGATTCTGTAT 58.001 43.478 12.58 0.00 36.77 2.29
900 980 5.394738 TCGGGATCCTAGTGATTCTGTATT 58.605 41.667 12.58 0.00 36.77 1.89
904 984 6.295575 GGGATCCTAGTGATTCTGTATTGGAG 60.296 46.154 12.58 0.00 32.41 3.86
905 985 6.495181 GGATCCTAGTGATTCTGTATTGGAGA 59.505 42.308 3.84 0.00 32.41 3.71
909 989 8.206867 TCCTAGTGATTCTGTATTGGAGATTTG 58.793 37.037 0.00 0.00 0.00 2.32
910 990 7.443575 CCTAGTGATTCTGTATTGGAGATTTGG 59.556 40.741 0.00 0.00 0.00 3.28
912 992 7.052873 AGTGATTCTGTATTGGAGATTTGGAG 58.947 38.462 0.00 0.00 0.00 3.86
914 994 5.779241 TTCTGTATTGGAGATTTGGAGGT 57.221 39.130 0.00 0.00 0.00 3.85
915 995 5.359194 TCTGTATTGGAGATTTGGAGGTC 57.641 43.478 0.00 0.00 0.00 3.85
916 996 4.164221 TCTGTATTGGAGATTTGGAGGTCC 59.836 45.833 0.00 0.00 0.00 4.46
918 998 0.999712 TTGGAGATTTGGAGGTCCCC 59.000 55.000 0.00 0.00 34.29 4.81
930 2083 2.722201 GGTCCCCGCACACTAGGAG 61.722 68.421 0.00 0.00 0.00 3.69
933 2086 2.291043 CCCCGCACACTAGGAGGTT 61.291 63.158 0.00 0.00 0.00 3.50
962 2115 0.175760 TCTATTGAGCGAGGCCACAC 59.824 55.000 5.01 0.00 0.00 3.82
1022 2175 0.241213 CCGTCTCACTCGCTTCTTCA 59.759 55.000 0.00 0.00 0.00 3.02
1142 3168 1.074850 CCTCCTCCTCCTTCCTCCC 60.075 68.421 0.00 0.00 0.00 4.30
1148 3174 1.455959 CCTCCTTCCTCCCGACGAT 60.456 63.158 0.00 0.00 0.00 3.73
1290 3316 2.618709 CAACAGTTCCAAGTCCTCCAAC 59.381 50.000 0.00 0.00 0.00 3.77
1331 3357 3.295304 CTCCACCACGTCGATGCCA 62.295 63.158 4.06 0.00 0.00 4.92
1454 3483 2.462255 TTTTCGTCGTCTCGGACCCG 62.462 60.000 1.31 1.31 41.35 5.28
1689 3725 2.287915 GACGATGGTTGCGAATGCTATT 59.712 45.455 0.00 0.00 43.34 1.73
1793 3841 2.030185 TGAGGTCTACTTCACACTTCGC 60.030 50.000 0.00 0.00 0.00 4.70
1996 4064 3.195396 GCTGAATGGGTAAAATGCAGGAA 59.805 43.478 0.00 0.00 32.07 3.36
2138 4254 0.539669 TCAAGTCAGGGCGAGTCAGA 60.540 55.000 0.00 0.00 0.00 3.27
2244 4371 7.383300 GCTTCTTGTCTATTGTCTTGCATTTTT 59.617 33.333 0.00 0.00 0.00 1.94
2274 4401 6.687105 CGGCTTCTGTATGTTTGCTTATTTAC 59.313 38.462 0.00 0.00 0.00 2.01
2396 4560 8.594881 AGAAAACTTAATATATGACGCTGGAG 57.405 34.615 0.00 0.00 0.00 3.86
2410 4575 5.523552 TGACGCTGGAGAACATAATGTAATG 59.476 40.000 0.00 0.00 0.00 1.90
2465 4633 1.193644 CATGCATTGGTCGAATTGCG 58.806 50.000 0.00 0.00 42.69 4.85
2466 4634 0.101040 ATGCATTGGTCGAATTGCGG 59.899 50.000 0.00 0.00 41.33 5.69
2589 4768 4.821805 ACATCTCAAACCCAGTGTTGTAAG 59.178 41.667 0.00 0.00 37.23 2.34
2643 4822 4.584325 AGCTCACCAAAGTAAAATGCTGAA 59.416 37.500 0.00 0.00 0.00 3.02
3021 5219 9.956720 ACTTCAATGTTGATCTTGTCTTTAAAG 57.043 29.630 9.04 9.04 37.00 1.85
3126 5421 8.624776 AGCATTTGTAAATAGATTCTAACAGGC 58.375 33.333 0.00 4.15 0.00 4.85
3128 5423 6.598753 TTGTAAATAGATTCTAACAGGCGC 57.401 37.500 0.00 0.00 0.00 6.53
3189 5485 1.281867 TGATGTTGGGATGTCCTGTCC 59.718 52.381 0.00 0.00 36.20 4.02
3221 5523 2.808543 CACCTCTTGTTTCTGTAGCCAC 59.191 50.000 0.00 0.00 0.00 5.01
3266 5582 6.421202 GTCCGGTTATTCTTCTGTGCTATTAG 59.579 42.308 0.00 0.00 0.00 1.73
3299 5649 4.860022 ACCCCTGGAATAAAATGTCTCTG 58.140 43.478 0.00 0.00 0.00 3.35
3425 5871 6.127925 TGCATTATCACTTTACCTTGCTTCAG 60.128 38.462 0.00 0.00 0.00 3.02
3499 5949 2.488153 GTCAAATGCAGTCCTGTAACCC 59.512 50.000 0.00 0.00 0.00 4.11
3545 5995 8.075574 CAGCCGCACATCAAATTATAAATTCTA 58.924 33.333 0.00 0.00 0.00 2.10
3565 6016 2.762535 AGATGGACAGTTGGTTACGG 57.237 50.000 0.00 0.00 0.00 4.02
3643 6096 1.568606 CCACTGATCTCTGATGTGCG 58.431 55.000 0.00 0.00 0.00 5.34
3651 6104 0.656259 CTCTGATGTGCGGCTCAATG 59.344 55.000 8.95 2.95 0.00 2.82
3740 6199 8.610035 GCTACTAATACCAGGTTGTATTTTGTC 58.390 37.037 0.00 0.00 40.79 3.18
3761 6220 4.150804 GTCTCTGTTGAGGAGTTTTAAGCG 59.849 45.833 0.00 0.00 40.58 4.68
3767 6226 4.067972 TGAGGAGTTTTAAGCGTGAAGT 57.932 40.909 0.00 0.00 0.00 3.01
3781 6240 2.349817 CGTGAAGTGGTGCAAGTCAATC 60.350 50.000 0.00 0.00 0.00 2.67
3799 6258 1.154413 CGTGATCAGTTGCGGTTGC 60.154 57.895 0.00 0.00 43.20 4.17
3840 6300 6.624352 TGATAATGTGGCTAGAGAATTTGC 57.376 37.500 0.00 0.00 0.00 3.68
3842 6302 4.708726 AATGTGGCTAGAGAATTTGCAC 57.291 40.909 0.00 0.00 0.00 4.57
3848 6308 3.376546 GGCTAGAGAATTTGCACTTCAGG 59.623 47.826 10.06 0.60 0.00 3.86
3852 6312 4.464008 AGAGAATTTGCACTTCAGGTTCA 58.536 39.130 10.06 0.00 0.00 3.18
3913 6373 1.438651 GTGCGAGCTACCATGTTTGA 58.561 50.000 0.00 0.00 0.00 2.69
3914 6374 1.128692 GTGCGAGCTACCATGTTTGAC 59.871 52.381 0.00 0.00 0.00 3.18
3938 6459 0.365859 GGTTCTCGTGTCGAATTCGC 59.634 55.000 22.90 17.36 39.60 4.70
3956 6478 1.735973 CCCTGATCATGTCGAGCGA 59.264 57.895 0.00 0.00 30.45 4.93
3957 6479 0.318529 CCCTGATCATGTCGAGCGAG 60.319 60.000 0.00 0.00 30.45 5.03
4022 6545 5.906073 ACTGTTTGCTTAAATGCTTGAGTT 58.094 33.333 0.00 0.00 0.00 3.01
4042 6565 5.491982 AGTTGGCTACATGAAACCTAGAAG 58.508 41.667 0.00 0.00 0.00 2.85
4043 6566 5.248477 AGTTGGCTACATGAAACCTAGAAGA 59.752 40.000 0.00 0.00 0.00 2.87
4051 6574 2.231478 TGAAACCTAGAAGACTCTGCGG 59.769 50.000 0.00 0.00 32.70 5.69
4067 6590 1.891811 TGCGGCATTTCCATTTTCTGA 59.108 42.857 0.00 0.00 34.01 3.27
4142 6869 3.900601 TGGTTTTTGGATTGCTATGTGGT 59.099 39.130 0.00 0.00 0.00 4.16
4150 6877 3.193267 GGATTGCTATGTGGTTTGCTTCA 59.807 43.478 0.00 0.00 0.00 3.02
4151 6878 4.321899 GGATTGCTATGTGGTTTGCTTCAA 60.322 41.667 0.00 0.00 0.00 2.69
4152 6879 3.921119 TGCTATGTGGTTTGCTTCAAG 57.079 42.857 0.00 0.00 0.00 3.02
4153 6880 2.557924 TGCTATGTGGTTTGCTTCAAGG 59.442 45.455 0.00 0.00 0.00 3.61
4154 6881 2.819608 GCTATGTGGTTTGCTTCAAGGA 59.180 45.455 0.00 0.00 0.00 3.36
4155 6882 3.255642 GCTATGTGGTTTGCTTCAAGGAA 59.744 43.478 0.00 0.00 0.00 3.36
4156 6883 4.082026 GCTATGTGGTTTGCTTCAAGGAAT 60.082 41.667 0.00 0.00 0.00 3.01
4157 6884 4.525912 ATGTGGTTTGCTTCAAGGAATC 57.474 40.909 0.00 0.00 0.00 2.52
4158 6885 2.627699 TGTGGTTTGCTTCAAGGAATCC 59.372 45.455 11.01 11.01 36.36 3.01
4159 6886 2.627699 GTGGTTTGCTTCAAGGAATCCA 59.372 45.455 15.53 15.53 41.23 3.41
4160 6887 3.259123 GTGGTTTGCTTCAAGGAATCCAT 59.741 43.478 20.73 0.00 43.85 3.41
4161 6888 3.258872 TGGTTTGCTTCAAGGAATCCATG 59.741 43.478 15.53 0.00 39.47 3.66
4162 6889 3.511146 GGTTTGCTTCAAGGAATCCATGA 59.489 43.478 12.65 2.70 36.01 3.07
4163 6890 4.488879 GTTTGCTTCAAGGAATCCATGAC 58.511 43.478 6.72 0.00 30.63 3.06
4164 6891 2.358957 TGCTTCAAGGAATCCATGACG 58.641 47.619 6.72 6.68 30.63 4.35
4174 6901 2.887790 TCCATGACGGAGACTCCAG 58.112 57.895 21.49 15.46 39.64 3.86
4175 6902 1.142748 CCATGACGGAGACTCCAGC 59.857 63.158 21.49 12.31 35.91 4.85
4177 6904 0.534412 CATGACGGAGACTCCAGCTT 59.466 55.000 21.49 7.59 35.91 3.74
4178 6905 0.820871 ATGACGGAGACTCCAGCTTC 59.179 55.000 21.49 11.45 35.91 3.86
4180 6907 0.172352 GACGGAGACTCCAGCTTCTG 59.828 60.000 21.49 5.60 35.91 3.02
4181 6908 0.251386 ACGGAGACTCCAGCTTCTGA 60.251 55.000 21.49 0.00 35.91 3.27
4184 6911 0.823460 GAGACTCCAGCTTCTGAGGG 59.177 60.000 8.96 0.00 32.44 4.30
4185 6912 1.220477 GACTCCAGCTTCTGAGGGC 59.780 63.158 8.96 0.00 32.44 5.19
4186 6913 2.186384 CTCCAGCTTCTGAGGGCG 59.814 66.667 0.00 0.00 32.44 6.13
4187 6914 4.087892 TCCAGCTTCTGAGGGCGC 62.088 66.667 0.00 0.00 32.44 6.53
4193 6920 4.802051 TTCTGAGGGCGCCCATGC 62.802 66.667 45.13 32.50 38.92 4.06
4196 6923 4.175337 TGAGGGCGCCCATGCTAC 62.175 66.667 45.13 26.90 38.92 3.58
4197 6924 4.937431 GAGGGCGCCCATGCTACC 62.937 72.222 45.13 20.97 38.92 3.18
4202 6929 3.536917 CGCCCATGCTACCGGAGA 61.537 66.667 9.46 0.00 34.43 3.71
4204 6931 1.451936 GCCCATGCTACCGGAGAAT 59.548 57.895 9.46 0.00 33.53 2.40
4209 6936 0.107456 ATGCTACCGGAGAATGGCTG 59.893 55.000 9.46 0.00 0.00 4.85
4210 6937 0.975556 TGCTACCGGAGAATGGCTGA 60.976 55.000 9.46 0.00 0.00 4.26
4211 6938 0.178068 GCTACCGGAGAATGGCTGAA 59.822 55.000 9.46 0.00 0.00 3.02
4212 6939 1.202698 GCTACCGGAGAATGGCTGAAT 60.203 52.381 9.46 0.00 0.00 2.57
4213 6940 2.487934 CTACCGGAGAATGGCTGAATG 58.512 52.381 9.46 0.00 0.00 2.67
4214 6941 0.749454 ACCGGAGAATGGCTGAATGC 60.749 55.000 9.46 0.00 41.94 3.56
4215 6942 0.465097 CCGGAGAATGGCTGAATGCT 60.465 55.000 0.00 0.00 42.39 3.79
4216 6943 0.661552 CGGAGAATGGCTGAATGCTG 59.338 55.000 0.00 0.00 42.39 4.41
4218 6945 1.948145 GGAGAATGGCTGAATGCTGAG 59.052 52.381 0.00 0.00 42.39 3.35
4222 6949 0.465824 ATGGCTGAATGCTGAGGCTC 60.466 55.000 7.79 7.79 42.39 4.70
4223 6950 2.178890 GGCTGAATGCTGAGGCTCG 61.179 63.158 10.42 6.02 42.39 5.03
4224 6951 2.821688 GCTGAATGCTGAGGCTCGC 61.822 63.158 19.62 19.62 39.59 5.03
4225 6952 1.153409 CTGAATGCTGAGGCTCGCT 60.153 57.895 24.21 11.19 39.59 4.93
4226 6953 0.743701 CTGAATGCTGAGGCTCGCTT 60.744 55.000 24.21 18.13 39.59 4.68
4228 6955 1.760268 GAATGCTGAGGCTCGCTTCG 61.760 60.000 24.21 7.70 39.59 3.79
4229 6956 3.729965 ATGCTGAGGCTCGCTTCGG 62.730 63.158 24.21 5.57 39.59 4.30
4230 6957 4.443266 GCTGAGGCTCGCTTCGGT 62.443 66.667 19.31 0.00 31.94 4.69
4232 6959 3.708220 CTGAGGCTCGCTTCGGTCC 62.708 68.421 10.42 0.00 0.00 4.46
4233 6960 3.760035 GAGGCTCGCTTCGGTCCA 61.760 66.667 0.00 0.00 0.00 4.02
4234 6961 3.708220 GAGGCTCGCTTCGGTCCAG 62.708 68.421 0.00 0.00 0.00 3.86
4241 6968 2.571757 CTTCGGTCCAGCGCACTA 59.428 61.111 11.47 0.00 0.00 2.74
4242 6969 1.805945 CTTCGGTCCAGCGCACTAC 60.806 63.158 11.47 3.51 0.00 2.73
4243 6970 2.214181 CTTCGGTCCAGCGCACTACT 62.214 60.000 11.47 0.00 0.00 2.57
4245 6972 1.226603 CGGTCCAGCGCACTACTAC 60.227 63.158 11.47 0.00 0.00 2.73
4246 6973 1.141234 GGTCCAGCGCACTACTACC 59.859 63.158 11.47 4.30 0.00 3.18
4247 6974 1.141234 GTCCAGCGCACTACTACCC 59.859 63.158 11.47 0.00 0.00 3.69
4248 6975 2.104331 CCAGCGCACTACTACCCG 59.896 66.667 11.47 0.00 0.00 5.28
4249 6976 2.104331 CAGCGCACTACTACCCGG 59.896 66.667 11.47 0.00 0.00 5.73
4250 6977 2.362120 AGCGCACTACTACCCGGT 60.362 61.111 11.47 0.00 0.00 5.28
4251 6978 2.202703 GCGCACTACTACCCGGTG 60.203 66.667 0.30 0.00 0.00 4.94
4253 6980 2.012902 GCGCACTACTACCCGGTGAT 62.013 60.000 0.30 0.00 33.32 3.06
4254 6981 0.030369 CGCACTACTACCCGGTGATC 59.970 60.000 0.00 0.00 33.32 2.92
4255 6982 0.388294 GCACTACTACCCGGTGATCC 59.612 60.000 0.00 0.00 33.32 3.36
4256 6983 2.027949 GCACTACTACCCGGTGATCCT 61.028 57.143 0.00 0.00 33.32 3.24
4257 6984 1.681793 CACTACTACCCGGTGATCCTG 59.318 57.143 0.00 0.00 33.32 3.86
4258 6985 0.674534 CTACTACCCGGTGATCCTGC 59.325 60.000 0.00 0.00 0.00 4.85
4259 6986 0.032912 TACTACCCGGTGATCCTGCA 60.033 55.000 0.00 0.00 0.00 4.41
4260 6987 1.330655 ACTACCCGGTGATCCTGCAG 61.331 60.000 6.78 6.78 0.00 4.41
4261 6988 2.650813 CTACCCGGTGATCCTGCAGC 62.651 65.000 8.66 0.00 0.00 5.25
4262 6989 3.790437 CCCGGTGATCCTGCAGCT 61.790 66.667 8.66 0.00 34.28 4.24
4263 6990 2.202987 CCGGTGATCCTGCAGCTC 60.203 66.667 8.66 7.89 34.28 4.09
4264 6991 2.584418 CGGTGATCCTGCAGCTCG 60.584 66.667 8.66 1.37 34.28 5.03
4265 6992 2.895680 GGTGATCCTGCAGCTCGA 59.104 61.111 8.66 0.01 33.68 4.04
4277 7004 3.474034 GCTCGAGCGTCTGTGTGC 61.474 66.667 23.61 0.00 0.00 4.57
4279 7006 2.050077 TCGAGCGTCTGTGTGCTG 60.050 61.111 0.00 0.00 42.60 4.41
4280 7007 3.771491 CGAGCGTCTGTGTGCTGC 61.771 66.667 0.00 0.00 42.60 5.25
4281 7008 3.418068 GAGCGTCTGTGTGCTGCC 61.418 66.667 0.00 0.00 42.60 4.85
4282 7009 3.873026 GAGCGTCTGTGTGCTGCCT 62.873 63.158 0.00 0.00 42.60 4.75
4283 7010 3.720193 GCGTCTGTGTGCTGCCTG 61.720 66.667 0.00 0.00 0.00 4.85
4284 7011 3.720193 CGTCTGTGTGCTGCCTGC 61.720 66.667 0.00 0.00 43.25 4.85
4294 7021 4.099170 CTGCCTGCAGCTTGACGC 62.099 66.667 8.66 5.76 44.23 5.19
4299 7026 4.577677 TGCAGCTTGACGCCCCAA 62.578 61.111 0.00 0.00 40.39 4.12
4300 7027 4.043200 GCAGCTTGACGCCCCAAC 62.043 66.667 0.00 0.00 40.39 3.77
4301 7028 2.281761 CAGCTTGACGCCCCAACT 60.282 61.111 0.00 0.00 40.39 3.16
4303 7030 4.043200 GCTTGACGCCCCAACTGC 62.043 66.667 0.00 0.00 0.00 4.40
4304 7031 2.281761 CTTGACGCCCCAACTGCT 60.282 61.111 0.00 0.00 0.00 4.24
4305 7032 2.594303 TTGACGCCCCAACTGCTG 60.594 61.111 0.00 0.00 0.00 4.41
4306 7033 3.113514 TTGACGCCCCAACTGCTGA 62.114 57.895 0.00 0.00 0.00 4.26
4307 7034 3.050275 GACGCCCCAACTGCTGAC 61.050 66.667 0.00 0.00 0.00 3.51
4308 7035 3.537206 GACGCCCCAACTGCTGACT 62.537 63.158 0.00 0.00 0.00 3.41
4310 7037 1.898574 CGCCCCAACTGCTGACTTT 60.899 57.895 0.00 0.00 0.00 2.66
4311 7038 1.662044 GCCCCAACTGCTGACTTTG 59.338 57.895 0.00 0.00 0.00 2.77
4312 7039 0.823356 GCCCCAACTGCTGACTTTGA 60.823 55.000 0.00 0.00 0.00 2.69
4314 7041 0.588252 CCCAACTGCTGACTTTGACG 59.412 55.000 0.00 0.00 0.00 4.35
4315 7042 0.040958 CCAACTGCTGACTTTGACGC 60.041 55.000 0.00 0.00 0.00 5.19
4316 7043 0.383491 CAACTGCTGACTTTGACGCG 60.383 55.000 3.53 3.53 0.00 6.01
4317 7044 0.810031 AACTGCTGACTTTGACGCGT 60.810 50.000 13.85 13.85 0.00 6.01
4318 7045 0.810031 ACTGCTGACTTTGACGCGTT 60.810 50.000 15.53 0.00 0.00 4.84
4319 7046 0.304705 CTGCTGACTTTGACGCGTTT 59.695 50.000 15.53 0.00 0.00 3.60
4321 7048 0.384353 GCTGACTTTGACGCGTTTCC 60.384 55.000 15.53 0.04 0.00 3.13
4322 7049 1.217882 CTGACTTTGACGCGTTTCCT 58.782 50.000 15.53 0.00 0.00 3.36
4323 7050 0.934496 TGACTTTGACGCGTTTCCTG 59.066 50.000 15.53 5.92 0.00 3.86
4324 7051 0.234884 GACTTTGACGCGTTTCCTGG 59.765 55.000 15.53 4.77 0.00 4.45
4325 7052 0.179067 ACTTTGACGCGTTTCCTGGA 60.179 50.000 15.53 0.00 0.00 3.86
4326 7053 0.234884 CTTTGACGCGTTTCCTGGAC 59.765 55.000 15.53 0.00 0.00 4.02
4327 7054 0.462225 TTTGACGCGTTTCCTGGACA 60.462 50.000 15.53 0.00 0.00 4.02
4328 7055 1.155424 TTGACGCGTTTCCTGGACAC 61.155 55.000 15.53 2.83 0.00 3.67
4331 7058 1.890041 CGCGTTTCCTGGACACCAA 60.890 57.895 7.38 0.00 30.80 3.67
4332 7059 1.841663 CGCGTTTCCTGGACACCAAG 61.842 60.000 7.38 0.00 30.80 3.61
4333 7060 0.534203 GCGTTTCCTGGACACCAAGA 60.534 55.000 7.38 0.00 30.80 3.02
4334 7061 1.512926 CGTTTCCTGGACACCAAGAG 58.487 55.000 7.38 0.00 30.80 2.85
4336 7063 0.843309 TTTCCTGGACACCAAGAGCA 59.157 50.000 0.00 0.00 30.80 4.26
4337 7064 0.843309 TTCCTGGACACCAAGAGCAA 59.157 50.000 0.00 0.00 30.80 3.91
4338 7065 0.397941 TCCTGGACACCAAGAGCAAG 59.602 55.000 0.00 0.00 30.80 4.01
4340 7067 1.202806 CCTGGACACCAAGAGCAAGAA 60.203 52.381 0.00 0.00 30.80 2.52
4341 7068 2.149578 CTGGACACCAAGAGCAAGAAG 58.850 52.381 0.00 0.00 30.80 2.85
4344 7071 2.746362 GGACACCAAGAGCAAGAAGATG 59.254 50.000 0.00 0.00 0.00 2.90
4346 7073 2.373169 ACACCAAGAGCAAGAAGATGGA 59.627 45.455 0.00 0.00 0.00 3.41
4347 7074 2.746362 CACCAAGAGCAAGAAGATGGAC 59.254 50.000 0.00 0.00 0.00 4.02
4349 7076 2.005451 CAAGAGCAAGAAGATGGACGG 58.995 52.381 0.00 0.00 0.00 4.79
4351 7078 1.078143 AGCAAGAAGATGGACGGCC 60.078 57.895 0.00 0.00 0.00 6.13
4353 7080 1.452108 CAAGAAGATGGACGGCCCC 60.452 63.158 3.83 0.00 0.00 5.80
4354 7081 3.031417 AAGAAGATGGACGGCCCCG 62.031 63.158 3.83 4.96 46.03 5.73
4355 7082 4.547367 GAAGATGGACGGCCCCGG 62.547 72.222 3.83 0.00 44.69 5.73
4368 7095 3.400054 CCCGGGACCTTGGTCTCC 61.400 72.222 18.48 15.59 0.00 3.71
4369 7096 3.400054 CCGGGACCTTGGTCTCCC 61.400 72.222 17.99 12.10 42.73 4.30
4371 7098 2.125225 GGGACCTTGGTCTCCCCT 59.875 66.667 17.99 0.00 40.53 4.79
4373 7100 0.981801 GGGACCTTGGTCTCCCCTAC 60.982 65.000 17.99 1.35 40.53 3.18
4374 7101 0.252558 GGACCTTGGTCTCCCCTACA 60.253 60.000 17.99 0.00 0.00 2.74
4375 7102 1.652947 GACCTTGGTCTCCCCTACAA 58.347 55.000 12.20 0.00 0.00 2.41
4377 7104 3.381335 GACCTTGGTCTCCCCTACAATA 58.619 50.000 12.20 0.00 0.00 1.90
4379 7106 2.102588 CCTTGGTCTCCCCTACAATACG 59.897 54.545 0.00 0.00 0.00 3.06
4380 7107 2.832643 TGGTCTCCCCTACAATACGA 57.167 50.000 0.00 0.00 0.00 3.43
4381 7108 2.381911 TGGTCTCCCCTACAATACGAC 58.618 52.381 0.00 0.00 0.00 4.34
4382 7109 2.291735 TGGTCTCCCCTACAATACGACA 60.292 50.000 0.00 0.00 0.00 4.35
4383 7110 2.762327 GGTCTCCCCTACAATACGACAA 59.238 50.000 0.00 0.00 0.00 3.18
4385 7112 2.424601 TCTCCCCTACAATACGACAACG 59.575 50.000 0.00 0.00 45.75 4.10
4386 7113 1.135024 TCCCCTACAATACGACAACGC 60.135 52.381 0.00 0.00 43.96 4.84
4387 7114 1.134907 CCCCTACAATACGACAACGCT 60.135 52.381 0.00 0.00 43.96 5.07
4388 7115 1.924524 CCCTACAATACGACAACGCTG 59.075 52.381 0.00 0.00 43.96 5.18
4389 7116 1.924524 CCTACAATACGACAACGCTGG 59.075 52.381 0.00 0.00 43.96 4.85
4390 7117 2.416296 CCTACAATACGACAACGCTGGA 60.416 50.000 0.00 0.00 43.96 3.86
4391 7118 1.710013 ACAATACGACAACGCTGGAG 58.290 50.000 0.00 0.00 43.96 3.86
4392 7119 0.370273 CAATACGACAACGCTGGAGC 59.630 55.000 0.00 0.00 43.96 4.70
4393 7120 0.246635 AATACGACAACGCTGGAGCT 59.753 50.000 0.00 0.00 43.96 4.09
4394 7121 0.458543 ATACGACAACGCTGGAGCTG 60.459 55.000 0.00 0.00 43.96 4.24
4395 7122 3.782244 CGACAACGCTGGAGCTGC 61.782 66.667 0.00 0.00 39.32 5.25
4396 7123 2.666190 GACAACGCTGGAGCTGCA 60.666 61.111 7.99 7.99 39.32 4.41
4397 7124 2.959357 GACAACGCTGGAGCTGCAC 61.959 63.158 2.72 0.46 39.32 4.57
4398 7125 2.667536 CAACGCTGGAGCTGCACT 60.668 61.111 2.72 0.00 39.32 4.40
4399 7126 2.111878 AACGCTGGAGCTGCACTT 59.888 55.556 2.72 0.00 39.32 3.16
4402 7129 2.033141 GCTGGAGCTGCACTTCCA 59.967 61.111 2.72 12.58 38.21 3.53
4403 7130 2.331132 GCTGGAGCTGCACTTCCAC 61.331 63.158 2.72 5.01 38.21 4.02
4404 7131 2.031012 TGGAGCTGCACTTCCACG 59.969 61.111 2.72 0.00 0.00 4.94
4405 7132 3.426568 GGAGCTGCACTTCCACGC 61.427 66.667 0.00 0.00 0.00 5.34
4406 7133 3.426568 GAGCTGCACTTCCACGCC 61.427 66.667 1.02 0.00 0.00 5.68
4414 7141 4.473520 CTTCCACGCCCCGCTGAT 62.474 66.667 0.00 0.00 0.00 2.90
4415 7142 4.467084 TTCCACGCCCCGCTGATC 62.467 66.667 0.00 0.00 0.00 2.92
4418 7145 2.514592 CACGCCCCGCTGATCATT 60.515 61.111 0.00 0.00 0.00 2.57
4419 7146 2.514592 ACGCCCCGCTGATCATTG 60.515 61.111 0.00 0.00 0.00 2.82
4420 7147 2.514592 CGCCCCGCTGATCATTGT 60.515 61.111 0.00 0.00 0.00 2.71
4421 7148 2.827051 CGCCCCGCTGATCATTGTG 61.827 63.158 0.00 0.00 0.00 3.33
4422 7149 3.113745 CCCCGCTGATCATTGTGC 58.886 61.111 0.00 0.00 0.00 4.57
4423 7150 2.484062 CCCCGCTGATCATTGTGCC 61.484 63.158 0.00 0.00 0.00 5.01
4424 7151 2.711311 CCGCTGATCATTGTGCCG 59.289 61.111 0.00 0.00 0.00 5.69
4425 7152 2.711311 CGCTGATCATTGTGCCGG 59.289 61.111 0.00 0.00 0.00 6.13
4426 7153 2.108514 CGCTGATCATTGTGCCGGT 61.109 57.895 1.90 0.00 0.00 5.28
4427 7154 1.430632 GCTGATCATTGTGCCGGTG 59.569 57.895 1.90 0.00 0.00 4.94
4428 7155 1.308069 GCTGATCATTGTGCCGGTGT 61.308 55.000 1.90 0.00 0.00 4.16
4429 7156 0.729116 CTGATCATTGTGCCGGTGTC 59.271 55.000 1.90 0.00 0.00 3.67
4430 7157 0.324614 TGATCATTGTGCCGGTGTCT 59.675 50.000 1.90 0.00 0.00 3.41
4431 7158 1.009829 GATCATTGTGCCGGTGTCTC 58.990 55.000 1.90 0.00 0.00 3.36
4432 7159 0.615331 ATCATTGTGCCGGTGTCTCT 59.385 50.000 1.90 0.00 0.00 3.10
4433 7160 0.396435 TCATTGTGCCGGTGTCTCTT 59.604 50.000 1.90 0.00 0.00 2.85
4434 7161 0.798776 CATTGTGCCGGTGTCTCTTC 59.201 55.000 1.90 0.00 0.00 2.87
4435 7162 0.687354 ATTGTGCCGGTGTCTCTTCT 59.313 50.000 1.90 0.00 0.00 2.85
4436 7163 0.249868 TTGTGCCGGTGTCTCTTCTG 60.250 55.000 1.90 0.00 0.00 3.02
4437 7164 1.367840 GTGCCGGTGTCTCTTCTGT 59.632 57.895 1.90 0.00 0.00 3.41
4438 7165 0.249911 GTGCCGGTGTCTCTTCTGTT 60.250 55.000 1.90 0.00 0.00 3.16
4439 7166 0.249868 TGCCGGTGTCTCTTCTGTTG 60.250 55.000 1.90 0.00 0.00 3.33
4440 7167 1.569479 GCCGGTGTCTCTTCTGTTGC 61.569 60.000 1.90 0.00 0.00 4.17
4441 7168 1.284982 CCGGTGTCTCTTCTGTTGCG 61.285 60.000 0.00 0.00 0.00 4.85
4442 7169 0.318699 CGGTGTCTCTTCTGTTGCGA 60.319 55.000 0.00 0.00 0.00 5.10
4443 7170 1.423395 GGTGTCTCTTCTGTTGCGAG 58.577 55.000 0.00 0.00 0.00 5.03
4444 7171 1.269831 GGTGTCTCTTCTGTTGCGAGT 60.270 52.381 0.00 0.00 0.00 4.18
4445 7172 1.789464 GTGTCTCTTCTGTTGCGAGTG 59.211 52.381 0.00 0.00 0.00 3.51
4446 7173 1.681264 TGTCTCTTCTGTTGCGAGTGA 59.319 47.619 0.00 0.00 0.00 3.41
4447 7174 2.297315 TGTCTCTTCTGTTGCGAGTGAT 59.703 45.455 0.00 0.00 0.00 3.06
4448 7175 2.920490 GTCTCTTCTGTTGCGAGTGATC 59.080 50.000 0.00 0.00 0.00 2.92
4449 7176 1.916651 CTCTTCTGTTGCGAGTGATCG 59.083 52.381 0.00 0.00 0.00 3.69
4450 7177 1.539827 TCTTCTGTTGCGAGTGATCGA 59.460 47.619 1.17 0.00 34.64 3.59
4451 7178 1.916651 CTTCTGTTGCGAGTGATCGAG 59.083 52.381 1.17 0.00 34.64 4.04
4452 7179 0.881796 TCTGTTGCGAGTGATCGAGT 59.118 50.000 1.17 0.00 34.64 4.18
4453 7180 1.135660 TCTGTTGCGAGTGATCGAGTC 60.136 52.381 1.17 0.00 34.64 3.36
4454 7181 0.109272 TGTTGCGAGTGATCGAGTCC 60.109 55.000 1.17 0.00 34.64 3.85
4455 7182 1.134530 GTTGCGAGTGATCGAGTCCG 61.135 60.000 1.17 0.00 34.64 4.79
4456 7183 1.583495 TTGCGAGTGATCGAGTCCGT 61.583 55.000 1.17 0.00 37.05 4.69
4457 7184 1.583967 GCGAGTGATCGAGTCCGTG 60.584 63.158 1.17 0.00 37.05 4.94
4458 7185 1.794864 CGAGTGATCGAGTCCGTGT 59.205 57.895 0.00 0.00 37.05 4.49
4459 7186 1.004595 CGAGTGATCGAGTCCGTGTA 58.995 55.000 0.00 0.00 37.05 2.90
4460 7187 1.267433 CGAGTGATCGAGTCCGTGTAC 60.267 57.143 0.00 0.00 37.05 2.90
4461 7188 2.008329 GAGTGATCGAGTCCGTGTACT 58.992 52.381 0.00 0.00 37.05 2.73
4462 7189 3.193263 GAGTGATCGAGTCCGTGTACTA 58.807 50.000 0.00 0.00 37.05 1.82
4463 7190 2.935201 AGTGATCGAGTCCGTGTACTAC 59.065 50.000 0.00 0.00 37.05 2.73
4464 7191 2.935201 GTGATCGAGTCCGTGTACTACT 59.065 50.000 0.00 0.00 37.05 2.57
4465 7192 2.934553 TGATCGAGTCCGTGTACTACTG 59.065 50.000 0.00 0.00 37.05 2.74
4466 7193 2.462456 TCGAGTCCGTGTACTACTGT 57.538 50.000 0.00 0.00 37.05 3.55
4467 7194 3.592898 TCGAGTCCGTGTACTACTGTA 57.407 47.619 0.00 0.00 37.05 2.74
4468 7195 3.515630 TCGAGTCCGTGTACTACTGTAG 58.484 50.000 13.13 13.13 37.05 2.74
4469 7196 3.193479 TCGAGTCCGTGTACTACTGTAGA 59.807 47.826 21.01 2.71 37.05 2.59
4470 7197 3.928992 CGAGTCCGTGTACTACTGTAGAA 59.071 47.826 21.01 3.99 0.00 2.10
4471 7198 4.389992 CGAGTCCGTGTACTACTGTAGAAA 59.610 45.833 21.01 6.23 0.00 2.52
4472 7199 5.064452 CGAGTCCGTGTACTACTGTAGAAAT 59.936 44.000 21.01 1.94 0.00 2.17
4473 7200 6.256539 CGAGTCCGTGTACTACTGTAGAAATA 59.743 42.308 21.01 4.84 0.00 1.40
4474 7201 7.516470 CGAGTCCGTGTACTACTGTAGAAATAG 60.516 44.444 21.01 9.01 0.00 1.73
4475 7202 6.038050 AGTCCGTGTACTACTGTAGAAATAGC 59.962 42.308 21.01 5.59 0.00 2.97
4476 7203 6.038050 GTCCGTGTACTACTGTAGAAATAGCT 59.962 42.308 21.01 0.00 0.00 3.32
4477 7204 7.225538 GTCCGTGTACTACTGTAGAAATAGCTA 59.774 40.741 21.01 0.00 0.00 3.32
4478 7205 7.935755 TCCGTGTACTACTGTAGAAATAGCTAT 59.064 37.037 21.01 0.00 0.00 2.97
4479 7206 8.229137 CCGTGTACTACTGTAGAAATAGCTATC 58.771 40.741 21.01 0.00 0.00 2.08
4480 7207 8.991026 CGTGTACTACTGTAGAAATAGCTATCT 58.009 37.037 21.01 4.33 0.00 1.98
4482 7209 9.848710 TGTACTACTGTAGAAATAGCTATCTGT 57.151 33.333 21.01 6.88 0.00 3.41
4484 7211 8.090250 ACTACTGTAGAAATAGCTATCTGTCG 57.910 38.462 21.01 3.59 0.00 4.35
4485 7212 7.932491 ACTACTGTAGAAATAGCTATCTGTCGA 59.068 37.037 21.01 0.00 0.00 4.20
4486 7213 7.197071 ACTGTAGAAATAGCTATCTGTCGAG 57.803 40.000 6.72 2.86 0.00 4.04
4487 7214 6.003234 TGTAGAAATAGCTATCTGTCGAGC 57.997 41.667 6.72 2.76 39.08 5.03
4488 7215 5.531287 TGTAGAAATAGCTATCTGTCGAGCA 59.469 40.000 6.72 4.92 41.36 4.26
4489 7216 5.119931 AGAAATAGCTATCTGTCGAGCAG 57.880 43.478 6.72 8.24 46.34 4.24
4490 7217 4.582656 AGAAATAGCTATCTGTCGAGCAGT 59.417 41.667 6.72 5.60 45.23 4.40
4491 7218 4.927978 AATAGCTATCTGTCGAGCAGTT 57.072 40.909 6.72 8.55 45.23 3.16
4492 7219 2.575694 AGCTATCTGTCGAGCAGTTG 57.424 50.000 12.62 7.24 45.23 3.16
4493 7220 1.135915 AGCTATCTGTCGAGCAGTTGG 59.864 52.381 12.62 8.92 45.23 3.77
4494 7221 1.565305 CTATCTGTCGAGCAGTTGGC 58.435 55.000 12.62 0.00 45.23 4.52
4510 7237 5.552870 AGTTGGCTTAGAACTGAAGAAGA 57.447 39.130 0.00 0.00 32.30 2.87
4511 7238 5.546526 AGTTGGCTTAGAACTGAAGAAGAG 58.453 41.667 0.00 0.00 32.30 2.85
4512 7239 5.305644 AGTTGGCTTAGAACTGAAGAAGAGA 59.694 40.000 0.00 0.00 32.30 3.10
4513 7240 5.398603 TGGCTTAGAACTGAAGAAGAGAG 57.601 43.478 0.00 0.00 0.00 3.20
4514 7241 5.080337 TGGCTTAGAACTGAAGAAGAGAGA 58.920 41.667 0.00 0.00 0.00 3.10
4515 7242 5.719085 TGGCTTAGAACTGAAGAAGAGAGAT 59.281 40.000 0.00 0.00 0.00 2.75
4516 7243 6.212388 TGGCTTAGAACTGAAGAAGAGAGATT 59.788 38.462 0.00 0.00 0.00 2.40
4517 7244 6.534793 GGCTTAGAACTGAAGAAGAGAGATTG 59.465 42.308 0.00 0.00 0.00 2.67
4518 7245 7.319646 GCTTAGAACTGAAGAAGAGAGATTGA 58.680 38.462 0.00 0.00 0.00 2.57
4519 7246 7.816995 GCTTAGAACTGAAGAAGAGAGATTGAA 59.183 37.037 0.00 0.00 0.00 2.69
4520 7247 9.357652 CTTAGAACTGAAGAAGAGAGATTGAAG 57.642 37.037 0.00 0.00 0.00 3.02
4521 7248 7.537596 AGAACTGAAGAAGAGAGATTGAAGA 57.462 36.000 0.00 0.00 0.00 2.87
4522 7249 7.378181 AGAACTGAAGAAGAGAGATTGAAGAC 58.622 38.462 0.00 0.00 0.00 3.01
4523 7250 6.662865 ACTGAAGAAGAGAGATTGAAGACA 57.337 37.500 0.00 0.00 0.00 3.41
4524 7251 6.690530 ACTGAAGAAGAGAGATTGAAGACAG 58.309 40.000 0.00 0.00 0.00 3.51
4525 7252 6.493115 ACTGAAGAAGAGAGATTGAAGACAGA 59.507 38.462 0.00 0.00 0.00 3.41
4526 7253 6.686630 TGAAGAAGAGAGATTGAAGACAGAC 58.313 40.000 0.00 0.00 0.00 3.51
4527 7254 6.266330 TGAAGAAGAGAGATTGAAGACAGACA 59.734 38.462 0.00 0.00 0.00 3.41
4528 7255 6.271488 AGAAGAGAGATTGAAGACAGACAG 57.729 41.667 0.00 0.00 0.00 3.51
4529 7256 6.009589 AGAAGAGAGATTGAAGACAGACAGA 58.990 40.000 0.00 0.00 0.00 3.41
4530 7257 5.643379 AGAGAGATTGAAGACAGACAGAC 57.357 43.478 0.00 0.00 0.00 3.51
4531 7258 5.076182 AGAGAGATTGAAGACAGACAGACA 58.924 41.667 0.00 0.00 0.00 3.41
4532 7259 5.538053 AGAGAGATTGAAGACAGACAGACAA 59.462 40.000 0.00 0.00 0.00 3.18
4533 7260 5.537188 AGAGATTGAAGACAGACAGACAAC 58.463 41.667 0.00 0.00 0.00 3.32
4534 7261 5.069648 AGAGATTGAAGACAGACAGACAACA 59.930 40.000 0.00 0.00 0.00 3.33
4535 7262 5.674525 AGATTGAAGACAGACAGACAACAA 58.325 37.500 0.00 0.00 0.00 2.83
4536 7263 5.525378 AGATTGAAGACAGACAGACAACAAC 59.475 40.000 0.00 0.00 0.00 3.32
4537 7264 4.200838 TGAAGACAGACAGACAACAACA 57.799 40.909 0.00 0.00 0.00 3.33
4538 7265 4.574892 TGAAGACAGACAGACAACAACAA 58.425 39.130 0.00 0.00 0.00 2.83
4539 7266 4.391830 TGAAGACAGACAGACAACAACAAC 59.608 41.667 0.00 0.00 0.00 3.32
4540 7267 3.270877 AGACAGACAGACAACAACAACC 58.729 45.455 0.00 0.00 0.00 3.77
4541 7268 3.006940 GACAGACAGACAACAACAACCA 58.993 45.455 0.00 0.00 0.00 3.67
4542 7269 3.417101 ACAGACAGACAACAACAACCAA 58.583 40.909 0.00 0.00 0.00 3.67
4543 7270 3.823873 ACAGACAGACAACAACAACCAAA 59.176 39.130 0.00 0.00 0.00 3.28
4544 7271 4.279671 ACAGACAGACAACAACAACCAAAA 59.720 37.500 0.00 0.00 0.00 2.44
4545 7272 4.858692 CAGACAGACAACAACAACCAAAAG 59.141 41.667 0.00 0.00 0.00 2.27
4546 7273 4.082245 AGACAGACAACAACAACCAAAAGG 60.082 41.667 0.00 0.00 0.00 3.11
4547 7274 3.056179 ACAGACAACAACAACCAAAAGGG 60.056 43.478 0.00 0.00 44.81 3.95
4548 7275 2.093711 AGACAACAACAACCAAAAGGGC 60.094 45.455 0.00 0.00 42.05 5.19
4549 7276 1.625818 ACAACAACAACCAAAAGGGCA 59.374 42.857 0.00 0.00 42.05 5.36
4550 7277 2.278854 CAACAACAACCAAAAGGGCAG 58.721 47.619 0.00 0.00 42.05 4.85
4551 7278 0.829990 ACAACAACCAAAAGGGCAGG 59.170 50.000 0.00 0.00 42.05 4.85
4552 7279 0.106521 CAACAACCAAAAGGGCAGGG 59.893 55.000 0.00 0.00 42.05 4.45
4553 7280 1.053835 AACAACCAAAAGGGCAGGGG 61.054 55.000 0.00 0.00 42.05 4.79
4554 7281 2.204034 AACCAAAAGGGCAGGGGG 59.796 61.111 0.00 0.00 42.05 5.40
4573 7300 4.368565 GGGGGTTACTGAAGAAAGACTT 57.631 45.455 0.00 0.00 42.03 3.01
4574 7301 4.726583 GGGGGTTACTGAAGAAAGACTTT 58.273 43.478 0.00 0.00 39.13 2.66
4586 7313 8.236585 TGAAGAAAGACTTTCCATGATTTTCA 57.763 30.769 21.67 18.68 40.54 2.69
4587 7314 8.863086 TGAAGAAAGACTTTCCATGATTTTCAT 58.137 29.630 21.67 0.00 40.54 2.57
4588 7315 9.136952 GAAGAAAGACTTTCCATGATTTTCATG 57.863 33.333 21.67 9.94 44.60 3.07
4616 7345 6.938030 TGTTTACCGGTCATGAAGACTAAAAT 59.062 34.615 12.40 0.00 46.72 1.82
4617 7346 6.978343 TTACCGGTCATGAAGACTAAAATG 57.022 37.500 12.40 0.00 46.72 2.32
4619 7348 6.045072 ACCGGTCATGAAGACTAAAATGTA 57.955 37.500 0.00 0.00 46.72 2.29
4621 7350 6.938030 ACCGGTCATGAAGACTAAAATGTAAA 59.062 34.615 0.00 0.00 46.72 2.01
4622 7351 7.446013 ACCGGTCATGAAGACTAAAATGTAAAA 59.554 33.333 0.00 0.00 46.72 1.52
4623 7352 8.293867 CCGGTCATGAAGACTAAAATGTAAAAA 58.706 33.333 0.00 0.00 46.72 1.94
4624 7353 9.113876 CGGTCATGAAGACTAAAATGTAAAAAC 57.886 33.333 0.00 0.00 46.72 2.43
4722 7525 1.298116 CCATCGCAATGCAAGCTCG 60.298 57.895 5.91 4.18 0.00 5.03
4737 7540 4.622740 GCAAGCTCGCAACTGAATAAAAAT 59.377 37.500 0.00 0.00 0.00 1.82
4868 7672 3.255642 GCCATGGAGAAACTGTAAGCAAA 59.744 43.478 18.40 0.00 37.60 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 4.627015 ACAGGGGTAATACACTACATGGA 58.373 43.478 0.00 0.00 0.00 3.41
80 81 2.158900 AGGTTGGCAACTAGATCCATCG 60.159 50.000 27.77 0.00 37.61 3.84
740 820 3.998672 GTGGCAACTCCGTCCGGA 61.999 66.667 0.00 0.00 42.90 5.14
741 821 4.308458 TGTGGCAACTCCGTCCGG 62.308 66.667 0.00 0.00 37.80 5.14
744 824 1.626654 CGATGTGTGGCAACTCCGTC 61.627 60.000 0.00 0.00 37.80 4.79
745 825 1.667830 CGATGTGTGGCAACTCCGT 60.668 57.895 0.00 0.00 37.80 4.69
746 826 2.390599 CCGATGTGTGGCAACTCCG 61.391 63.158 0.00 0.00 37.80 4.63
749 829 1.667830 CGTCCGATGTGTGGCAACT 60.668 57.895 0.00 0.00 37.61 3.16
750 830 1.959226 ACGTCCGATGTGTGGCAAC 60.959 57.895 0.00 0.00 0.00 4.17
751 831 1.958715 CACGTCCGATGTGTGGCAA 60.959 57.895 11.96 0.00 30.72 4.52
754 834 3.478394 CGCACGTCCGATGTGTGG 61.478 66.667 21.75 11.45 40.80 4.17
798 878 3.675619 ATAACCAGCCCGCACGACC 62.676 63.158 0.00 0.00 0.00 4.79
799 879 1.743995 AATAACCAGCCCGCACGAC 60.744 57.895 0.00 0.00 0.00 4.34
801 881 1.977594 GACAATAACCAGCCCGCACG 61.978 60.000 0.00 0.00 0.00 5.34
802 882 1.654023 GGACAATAACCAGCCCGCAC 61.654 60.000 0.00 0.00 0.00 5.34
806 886 0.746659 GCATGGACAATAACCAGCCC 59.253 55.000 0.00 0.00 40.89 5.19
807 887 0.746659 GGCATGGACAATAACCAGCC 59.253 55.000 0.00 0.00 40.97 4.85
808 888 1.134946 GTGGCATGGACAATAACCAGC 59.865 52.381 0.00 0.00 40.89 4.85
809 889 2.164219 GTGTGGCATGGACAATAACCAG 59.836 50.000 0.00 0.00 40.89 4.00
810 890 2.166829 GTGTGGCATGGACAATAACCA 58.833 47.619 0.00 0.00 41.83 3.67
811 891 1.132262 CGTGTGGCATGGACAATAACC 59.868 52.381 0.00 0.00 0.00 2.85
817 897 2.347114 CCTCGTGTGGCATGGACA 59.653 61.111 0.00 0.00 0.00 4.02
837 917 3.479269 GACAGAAACTCGCCCGCG 61.479 66.667 0.00 0.00 41.35 6.46
838 918 3.119096 GGACAGAAACTCGCCCGC 61.119 66.667 0.00 0.00 0.00 6.13
839 919 1.079127 ATGGACAGAAACTCGCCCG 60.079 57.895 0.00 0.00 0.00 6.13
840 920 1.648467 GCATGGACAGAAACTCGCCC 61.648 60.000 0.00 0.00 0.00 6.13
841 921 1.648467 GGCATGGACAGAAACTCGCC 61.648 60.000 0.00 0.00 0.00 5.54
844 924 1.537202 GTGTGGCATGGACAGAAACTC 59.463 52.381 0.00 0.00 0.00 3.01
846 926 0.238289 CGTGTGGCATGGACAGAAAC 59.762 55.000 0.00 0.00 0.00 2.78
847 927 0.179032 ACGTGTGGCATGGACAGAAA 60.179 50.000 0.00 0.00 0.00 2.52
849 929 1.301637 CACGTGTGGCATGGACAGA 60.302 57.895 7.58 0.00 0.00 3.41
850 930 1.597854 ACACGTGTGGCATGGACAG 60.598 57.895 22.71 0.00 34.19 3.51
851 931 1.891449 CACACGTGTGGCATGGACA 60.891 57.895 35.65 0.00 42.10 4.02
860 940 1.719246 CCGATAACTGTCACACGTGTG 59.281 52.381 37.04 37.04 46.91 3.82
861 941 1.336517 CCCGATAACTGTCACACGTGT 60.337 52.381 17.22 17.22 0.00 4.49
863 943 1.250328 TCCCGATAACTGTCACACGT 58.750 50.000 0.00 0.00 0.00 4.49
864 944 2.460918 GATCCCGATAACTGTCACACG 58.539 52.381 0.00 0.00 0.00 4.49
866 946 2.747177 AGGATCCCGATAACTGTCACA 58.253 47.619 8.55 0.00 0.00 3.58
868 948 3.889538 CACTAGGATCCCGATAACTGTCA 59.110 47.826 8.55 0.00 0.00 3.58
871 951 5.478679 AGAATCACTAGGATCCCGATAACTG 59.521 44.000 8.55 0.00 34.28 3.16
874 954 5.394738 ACAGAATCACTAGGATCCCGATAA 58.605 41.667 8.55 0.00 34.28 1.75
875 955 4.999310 ACAGAATCACTAGGATCCCGATA 58.001 43.478 8.55 0.00 34.28 2.92
876 956 3.850752 ACAGAATCACTAGGATCCCGAT 58.149 45.455 8.55 2.88 34.28 4.18
877 957 3.314307 ACAGAATCACTAGGATCCCGA 57.686 47.619 8.55 0.22 34.28 5.14
884 964 7.443575 CCAAATCTCCAATACAGAATCACTAGG 59.556 40.741 0.00 0.00 0.00 3.02
885 965 8.206867 TCCAAATCTCCAATACAGAATCACTAG 58.793 37.037 0.00 0.00 0.00 2.57
886 966 8.089625 TCCAAATCTCCAATACAGAATCACTA 57.910 34.615 0.00 0.00 0.00 2.74
889 969 6.069440 ACCTCCAAATCTCCAATACAGAATCA 60.069 38.462 0.00 0.00 0.00 2.57
890 970 6.360618 ACCTCCAAATCTCCAATACAGAATC 58.639 40.000 0.00 0.00 0.00 2.52
891 971 6.332976 ACCTCCAAATCTCCAATACAGAAT 57.667 37.500 0.00 0.00 0.00 2.40
892 972 5.339200 GGACCTCCAAATCTCCAATACAGAA 60.339 44.000 0.00 0.00 35.64 3.02
893 973 4.164221 GGACCTCCAAATCTCCAATACAGA 59.836 45.833 0.00 0.00 35.64 3.41
895 975 3.202151 GGGACCTCCAAATCTCCAATACA 59.798 47.826 0.00 0.00 37.91 2.29
914 994 2.363795 CCTCCTAGTGTGCGGGGA 60.364 66.667 0.00 0.00 0.00 4.81
915 995 1.838073 AAACCTCCTAGTGTGCGGGG 61.838 60.000 0.00 0.00 0.00 5.73
916 996 0.391263 GAAACCTCCTAGTGTGCGGG 60.391 60.000 0.00 0.00 0.00 6.13
918 998 2.002586 CATGAAACCTCCTAGTGTGCG 58.997 52.381 0.00 0.00 0.00 5.34
930 2083 6.785191 TCGCTCAATAGAAAATCATGAAACC 58.215 36.000 0.00 0.00 0.00 3.27
933 2086 5.008019 GCCTCGCTCAATAGAAAATCATGAA 59.992 40.000 0.00 0.00 0.00 2.57
964 2117 4.742201 CGACCAGGGTCTGTGCCG 62.742 72.222 15.95 0.00 42.54 5.69
965 2118 3.302347 CTCGACCAGGGTCTGTGCC 62.302 68.421 15.95 0.00 42.54 5.01
966 2119 2.262915 CTCGACCAGGGTCTGTGC 59.737 66.667 15.95 0.00 42.54 4.57
968 2121 2.997897 GGCTCGACCAGGGTCTGT 60.998 66.667 15.95 0.00 42.54 3.41
1016 2169 0.903454 GTCGGGGAGGAGGTGAAGAA 60.903 60.000 0.00 0.00 0.00 2.52
1022 2175 4.716977 GTGGGTCGGGGAGGAGGT 62.717 72.222 0.00 0.00 0.00 3.85
1142 3168 3.471244 GAGGTGCTCGGGATCGTCG 62.471 68.421 0.00 1.31 37.69 5.12
1148 3174 3.068691 CGGAAGAGGTGCTCGGGA 61.069 66.667 0.00 0.00 35.36 5.14
1689 3725 0.687427 TCATCTCGGATGTGCTGGGA 60.687 55.000 11.91 0.00 36.63 4.37
1700 3736 3.426695 GGTTTTCTGCAATGTCATCTCGG 60.427 47.826 0.00 0.00 0.00 4.63
1793 3841 3.496130 ACTTGACGATTTTGTGAGCAGAG 59.504 43.478 0.00 0.00 0.00 3.35
1996 4064 2.027745 ACAATTGTCTCCAGCTCGATGT 60.028 45.455 4.92 0.00 0.00 3.06
2138 4254 1.074775 TGCGGGCTCATCAACCTTT 59.925 52.632 0.00 0.00 0.00 3.11
2208 4328 6.211584 ACAATAGACAAGAAGCAAGGTCTAGA 59.788 38.462 0.00 0.00 43.68 2.43
2244 4371 3.187637 GCAAACATACAGAAGCCGTAACA 59.812 43.478 0.00 0.00 0.00 2.41
2274 4401 5.418310 ACGACTAATTGTTCACAACCAAG 57.582 39.130 0.00 0.00 38.86 3.61
2465 4633 6.919721 ACCAACATGTTTGTGTACATATTCC 58.080 36.000 14.07 0.00 36.64 3.01
2466 4634 7.816640 AGACCAACATGTTTGTGTACATATTC 58.183 34.615 19.13 2.73 36.64 1.75
2643 4822 8.908903 TGTACAAAACTCATAACAAACTCCAAT 58.091 29.630 0.00 0.00 0.00 3.16
2905 5100 4.458989 CCAAGAATTAGGCAAACAGTAGCA 59.541 41.667 0.83 0.00 0.00 3.49
3021 5219 5.302059 TCTGGTACTGCTACTTGACATATCC 59.698 44.000 0.00 0.00 0.00 2.59
3081 5292 3.042887 GCTAAACGCTTTGTGGTGAAAG 58.957 45.455 0.00 0.00 36.23 2.62
3126 5421 0.515564 AAAAACATCCGAGTTCCGCG 59.484 50.000 0.00 0.00 36.84 6.46
3128 5423 2.806244 AGTGAAAAACATCCGAGTTCCG 59.194 45.455 0.00 0.00 38.18 4.30
3189 5485 9.057089 ACAGAAACAAGAGGTGACTTATTTTAG 57.943 33.333 0.00 0.00 44.43 1.85
3221 5523 5.113502 GACCTGAGTCCACAATTGAAAAG 57.886 43.478 13.59 0.00 37.00 2.27
3266 5582 2.435372 TCCAGGGGTAATGTTGCATC 57.565 50.000 0.00 0.00 0.00 3.91
3299 5649 3.983344 CCAATCAACAGCAGTAGCAAAAC 59.017 43.478 0.00 0.00 45.49 2.43
3499 5949 6.641314 CGGCTGTATGTATAACTAGTTCCAAG 59.359 42.308 12.39 4.03 0.00 3.61
3545 5995 2.290071 CCCGTAACCAACTGTCCATCTT 60.290 50.000 0.00 0.00 0.00 2.40
3643 6096 2.166870 TGCAATTCATCACCATTGAGCC 59.833 45.455 0.00 0.00 34.35 4.70
3651 6104 2.679336 GCCCATTTTGCAATTCATCACC 59.321 45.455 0.00 0.00 0.00 4.02
3679 6132 1.268999 CGGCAGCAGACTAGAGATGAC 60.269 57.143 0.00 0.00 0.00 3.06
3686 6140 4.192000 CCAACGGCAGCAGACTAG 57.808 61.111 0.00 0.00 0.00 2.57
3740 6199 4.058817 ACGCTTAAAACTCCTCAACAGAG 58.941 43.478 0.00 0.00 37.39 3.35
3761 6220 2.349817 CGATTGACTTGCACCACTTCAC 60.350 50.000 0.00 0.00 0.00 3.18
3767 6226 2.076100 GATCACGATTGACTTGCACCA 58.924 47.619 0.00 0.00 33.38 4.17
3781 6240 1.154413 GCAACCGCAACTGATCACG 60.154 57.895 0.00 0.00 38.36 4.35
3799 6258 3.251479 TCATGATGAACTGAACGAGGG 57.749 47.619 0.00 0.00 0.00 4.30
3840 6300 6.263168 AGAAACCAACTTATGAACCTGAAGTG 59.737 38.462 0.00 0.00 33.75 3.16
3842 6302 6.884280 AGAAACCAACTTATGAACCTGAAG 57.116 37.500 0.00 0.00 0.00 3.02
3852 6312 9.461312 TGCATAACAGATAAGAAACCAACTTAT 57.539 29.630 0.00 0.00 41.38 1.73
3913 6373 1.105167 TCGACACGAGAACCACTGGT 61.105 55.000 0.00 0.00 38.05 4.00
3914 6374 0.031585 TTCGACACGAGAACCACTGG 59.968 55.000 0.00 0.00 37.14 4.00
3938 6459 0.318529 CTCGCTCGACATGATCAGGG 60.319 60.000 12.66 3.94 0.00 4.45
3956 6478 4.994852 TGCTAAACAGAAATACAGTTCGCT 59.005 37.500 0.00 0.00 32.50 4.93
3957 6479 5.277601 TGCTAAACAGAAATACAGTTCGC 57.722 39.130 0.00 0.00 32.50 4.70
3987 6509 8.495361 TTTAAGCAAACAGTAACAGAAGTACA 57.505 30.769 0.00 0.00 0.00 2.90
4022 6545 4.777896 AGTCTTCTAGGTTTCATGTAGCCA 59.222 41.667 7.91 0.00 0.00 4.75
4042 6565 1.098050 AATGGAAATGCCGCAGAGTC 58.902 50.000 0.00 0.00 40.66 3.36
4043 6566 1.549203 AAATGGAAATGCCGCAGAGT 58.451 45.000 0.00 0.00 40.66 3.24
4142 6869 3.191162 CGTCATGGATTCCTTGAAGCAAA 59.809 43.478 19.70 0.00 38.98 3.68
4157 6884 1.142748 GCTGGAGTCTCCGTCATGG 59.857 63.158 14.34 1.73 40.17 3.66
4158 6885 0.534412 AAGCTGGAGTCTCCGTCATG 59.466 55.000 14.34 3.35 40.17 3.07
4159 6886 0.820871 GAAGCTGGAGTCTCCGTCAT 59.179 55.000 14.34 1.25 40.17 3.06
4160 6887 0.251386 AGAAGCTGGAGTCTCCGTCA 60.251 55.000 14.34 0.00 40.17 4.35
4161 6888 0.172352 CAGAAGCTGGAGTCTCCGTC 59.828 60.000 14.34 8.10 40.17 4.79
4162 6889 0.251386 TCAGAAGCTGGAGTCTCCGT 60.251 55.000 14.34 0.00 40.17 4.69
4163 6890 0.455410 CTCAGAAGCTGGAGTCTCCG 59.545 60.000 14.34 9.93 40.17 4.63
4164 6891 0.823460 CCTCAGAAGCTGGAGTCTCC 59.177 60.000 12.40 12.40 36.96 3.71
4167 6894 1.220477 GCCCTCAGAAGCTGGAGTC 59.780 63.158 8.86 0.00 31.51 3.36
4169 6896 2.186384 CGCCCTCAGAAGCTGGAG 59.814 66.667 0.00 0.00 31.51 3.86
4170 6897 4.087892 GCGCCCTCAGAAGCTGGA 62.088 66.667 0.00 0.00 31.51 3.86
4174 6901 4.496336 ATGGGCGCCCTCAGAAGC 62.496 66.667 43.34 17.51 36.94 3.86
4175 6902 2.515523 CATGGGCGCCCTCAGAAG 60.516 66.667 43.34 23.05 36.94 2.85
4186 6913 0.886490 CATTCTCCGGTAGCATGGGC 60.886 60.000 0.00 0.00 41.61 5.36
4187 6914 0.250467 CCATTCTCCGGTAGCATGGG 60.250 60.000 18.22 4.48 43.21 4.00
4189 6916 0.107456 AGCCATTCTCCGGTAGCATG 59.893 55.000 0.00 4.04 0.00 4.06
4190 6917 0.107456 CAGCCATTCTCCGGTAGCAT 59.893 55.000 0.00 0.00 0.00 3.79
4193 6920 2.487934 CATTCAGCCATTCTCCGGTAG 58.512 52.381 0.00 0.00 0.00 3.18
4194 6921 1.475034 GCATTCAGCCATTCTCCGGTA 60.475 52.381 0.00 0.00 37.23 4.02
4196 6923 2.028130 GCATTCAGCCATTCTCCGG 58.972 57.895 0.00 0.00 37.23 5.14
4209 6936 1.760268 CGAAGCGAGCCTCAGCATTC 61.760 60.000 10.33 9.45 43.56 2.67
4210 6937 1.812922 CGAAGCGAGCCTCAGCATT 60.813 57.895 10.33 3.35 43.56 3.56
4211 6938 2.202851 CGAAGCGAGCCTCAGCAT 60.203 61.111 10.33 0.00 43.56 3.79
4212 6939 4.441695 CCGAAGCGAGCCTCAGCA 62.442 66.667 10.33 0.00 43.56 4.41
4213 6940 4.443266 ACCGAAGCGAGCCTCAGC 62.443 66.667 0.00 0.00 40.32 4.26
4214 6941 2.202676 GACCGAAGCGAGCCTCAG 60.203 66.667 0.00 0.00 0.00 3.35
4215 6942 3.760035 GGACCGAAGCGAGCCTCA 61.760 66.667 0.00 0.00 0.00 3.86
4216 6943 3.708220 CTGGACCGAAGCGAGCCTC 62.708 68.421 0.00 0.00 0.00 4.70
4223 6950 3.642778 TAGTGCGCTGGACCGAAGC 62.643 63.158 10.80 0.00 37.31 3.86
4224 6951 1.805945 GTAGTGCGCTGGACCGAAG 60.806 63.158 10.80 0.00 0.00 3.79
4225 6952 0.961857 TAGTAGTGCGCTGGACCGAA 60.962 55.000 10.80 0.00 0.00 4.30
4226 6953 1.377594 TAGTAGTGCGCTGGACCGA 60.378 57.895 10.80 0.00 0.00 4.69
4228 6955 1.141234 GGTAGTAGTGCGCTGGACC 59.859 63.158 10.80 10.45 0.00 4.46
4229 6956 1.141234 GGGTAGTAGTGCGCTGGAC 59.859 63.158 10.80 0.23 0.00 4.02
4230 6957 2.412323 CGGGTAGTAGTGCGCTGGA 61.412 63.158 10.80 0.00 0.00 3.86
4232 6959 2.104331 CCGGGTAGTAGTGCGCTG 59.896 66.667 10.80 0.00 0.00 5.18
4233 6960 2.362120 ACCGGGTAGTAGTGCGCT 60.362 61.111 9.73 4.58 0.00 5.92
4234 6961 2.012902 ATCACCGGGTAGTAGTGCGC 62.013 60.000 6.32 0.00 0.00 6.09
4235 6962 0.030369 GATCACCGGGTAGTAGTGCG 59.970 60.000 6.32 0.00 0.00 5.34
4236 6963 0.388294 GGATCACCGGGTAGTAGTGC 59.612 60.000 6.32 0.00 0.00 4.40
4239 6966 0.674534 GCAGGATCACCGGGTAGTAG 59.325 60.000 6.32 0.00 41.83 2.57
4240 6967 0.032912 TGCAGGATCACCGGGTAGTA 60.033 55.000 6.32 0.00 41.83 1.82
4241 6968 1.305802 TGCAGGATCACCGGGTAGT 60.306 57.895 6.32 0.00 41.83 2.73
4242 6969 1.443407 CTGCAGGATCACCGGGTAG 59.557 63.158 6.32 0.00 41.83 3.18
4243 6970 2.731571 GCTGCAGGATCACCGGGTA 61.732 63.158 17.12 0.00 41.83 3.69
4245 6972 3.746949 GAGCTGCAGGATCACCGGG 62.747 68.421 17.12 0.00 41.83 5.73
4246 6973 2.202987 GAGCTGCAGGATCACCGG 60.203 66.667 17.12 0.00 41.83 5.28
4247 6974 2.584418 CGAGCTGCAGGATCACCG 60.584 66.667 17.12 3.34 41.83 4.94
4248 6975 1.227205 CTCGAGCTGCAGGATCACC 60.227 63.158 17.12 0.00 0.00 4.02
4249 6976 1.882167 GCTCGAGCTGCAGGATCAC 60.882 63.158 29.88 0.00 38.21 3.06
4250 6977 2.498248 GCTCGAGCTGCAGGATCA 59.502 61.111 29.88 0.00 38.21 2.92
4251 6978 2.657944 CGCTCGAGCTGCAGGATC 60.658 66.667 32.88 3.57 39.32 3.36
4253 6980 4.121669 GACGCTCGAGCTGCAGGA 62.122 66.667 32.88 3.21 39.32 3.86
4254 6981 4.127040 AGACGCTCGAGCTGCAGG 62.127 66.667 32.88 20.16 39.32 4.85
4255 6982 2.879933 CAGACGCTCGAGCTGCAG 60.880 66.667 32.88 20.52 39.32 4.41
4256 6983 3.674523 ACAGACGCTCGAGCTGCA 61.675 61.111 32.88 0.00 39.32 4.41
4257 6984 3.177920 CACAGACGCTCGAGCTGC 61.178 66.667 32.88 23.86 39.32 5.25
4258 6985 2.085262 CACACAGACGCTCGAGCTG 61.085 63.158 32.88 26.09 39.32 4.24
4259 6986 2.256764 CACACAGACGCTCGAGCT 59.743 61.111 32.88 20.73 39.32 4.09
4260 6987 3.474034 GCACACAGACGCTCGAGC 61.474 66.667 27.64 27.64 37.78 5.03
4261 6988 2.085262 CAGCACACAGACGCTCGAG 61.085 63.158 8.45 8.45 35.96 4.04
4262 6989 2.050077 CAGCACACAGACGCTCGA 60.050 61.111 0.00 0.00 35.96 4.04
4263 6990 3.771491 GCAGCACACAGACGCTCG 61.771 66.667 0.00 0.00 35.96 5.03
4264 6991 3.418068 GGCAGCACACAGACGCTC 61.418 66.667 0.00 0.00 35.96 5.03
4265 6992 3.933722 AGGCAGCACACAGACGCT 61.934 61.111 0.00 0.00 39.66 5.07
4277 7004 4.099170 GCGTCAAGCTGCAGGCAG 62.099 66.667 17.12 16.68 46.15 4.85
4287 7014 2.281761 AGCAGTTGGGGCGTCAAG 60.282 61.111 0.00 0.00 36.08 3.02
4289 7016 3.555324 TCAGCAGTTGGGGCGTCA 61.555 61.111 0.00 0.00 36.08 4.35
4290 7017 3.050275 GTCAGCAGTTGGGGCGTC 61.050 66.667 0.00 0.00 36.08 5.19
4291 7018 2.624674 AAAGTCAGCAGTTGGGGCGT 62.625 55.000 0.00 0.00 36.08 5.68
4292 7019 1.898574 AAAGTCAGCAGTTGGGGCG 60.899 57.895 0.00 0.00 36.08 6.13
4293 7020 0.823356 TCAAAGTCAGCAGTTGGGGC 60.823 55.000 0.00 0.00 0.00 5.80
4294 7021 0.954452 GTCAAAGTCAGCAGTTGGGG 59.046 55.000 0.00 0.00 0.00 4.96
4295 7022 0.588252 CGTCAAAGTCAGCAGTTGGG 59.412 55.000 0.00 0.00 0.00 4.12
4296 7023 0.040958 GCGTCAAAGTCAGCAGTTGG 60.041 55.000 0.00 0.00 0.00 3.77
4297 7024 0.383491 CGCGTCAAAGTCAGCAGTTG 60.383 55.000 0.00 0.00 0.00 3.16
4298 7025 0.810031 ACGCGTCAAAGTCAGCAGTT 60.810 50.000 5.58 0.00 0.00 3.16
4299 7026 0.810031 AACGCGTCAAAGTCAGCAGT 60.810 50.000 14.44 0.00 0.00 4.40
4300 7027 0.304705 AAACGCGTCAAAGTCAGCAG 59.695 50.000 14.44 0.00 0.00 4.24
4301 7028 0.303493 GAAACGCGTCAAAGTCAGCA 59.697 50.000 14.44 0.00 0.00 4.41
4303 7030 1.070577 CAGGAAACGCGTCAAAGTCAG 60.071 52.381 14.44 0.00 0.00 3.51
4304 7031 0.934496 CAGGAAACGCGTCAAAGTCA 59.066 50.000 14.44 0.00 0.00 3.41
4305 7032 0.234884 CCAGGAAACGCGTCAAAGTC 59.765 55.000 14.44 5.24 0.00 3.01
4306 7033 0.179067 TCCAGGAAACGCGTCAAAGT 60.179 50.000 14.44 0.00 0.00 2.66
4307 7034 0.234884 GTCCAGGAAACGCGTCAAAG 59.765 55.000 14.44 1.53 0.00 2.77
4308 7035 0.462225 TGTCCAGGAAACGCGTCAAA 60.462 50.000 14.44 0.00 0.00 2.69
4310 7037 1.593209 GTGTCCAGGAAACGCGTCA 60.593 57.895 14.44 0.00 0.00 4.35
4311 7038 2.315386 GGTGTCCAGGAAACGCGTC 61.315 63.158 14.44 0.00 0.00 5.19
4312 7039 2.280592 GGTGTCCAGGAAACGCGT 60.281 61.111 5.58 5.58 0.00 6.01
4314 7041 0.534203 TCTTGGTGTCCAGGAAACGC 60.534 55.000 3.44 0.00 36.68 4.84
4315 7042 1.512926 CTCTTGGTGTCCAGGAAACG 58.487 55.000 3.44 0.00 39.11 3.60
4316 7043 1.239347 GCTCTTGGTGTCCAGGAAAC 58.761 55.000 0.15 0.15 39.11 2.78
4317 7044 0.843309 TGCTCTTGGTGTCCAGGAAA 59.157 50.000 0.00 0.00 39.11 3.13
4318 7045 0.843309 TTGCTCTTGGTGTCCAGGAA 59.157 50.000 0.00 0.00 39.11 3.36
4319 7046 0.397941 CTTGCTCTTGGTGTCCAGGA 59.602 55.000 1.01 1.01 37.29 3.86
4321 7048 2.149578 CTTCTTGCTCTTGGTGTCCAG 58.850 52.381 0.00 0.00 33.81 3.86
4322 7049 1.768275 TCTTCTTGCTCTTGGTGTCCA 59.232 47.619 0.00 0.00 0.00 4.02
4323 7050 2.550830 TCTTCTTGCTCTTGGTGTCC 57.449 50.000 0.00 0.00 0.00 4.02
4324 7051 2.746362 CCATCTTCTTGCTCTTGGTGTC 59.254 50.000 0.00 0.00 0.00 3.67
4325 7052 2.373169 TCCATCTTCTTGCTCTTGGTGT 59.627 45.455 0.00 0.00 0.00 4.16
4326 7053 2.746362 GTCCATCTTCTTGCTCTTGGTG 59.254 50.000 0.00 0.00 0.00 4.17
4327 7054 2.613977 CGTCCATCTTCTTGCTCTTGGT 60.614 50.000 0.00 0.00 0.00 3.67
4328 7055 2.005451 CGTCCATCTTCTTGCTCTTGG 58.995 52.381 0.00 0.00 0.00 3.61
4331 7058 0.107945 GCCGTCCATCTTCTTGCTCT 60.108 55.000 0.00 0.00 0.00 4.09
4332 7059 1.092345 GGCCGTCCATCTTCTTGCTC 61.092 60.000 0.00 0.00 0.00 4.26
4333 7060 1.078143 GGCCGTCCATCTTCTTGCT 60.078 57.895 0.00 0.00 0.00 3.91
4334 7061 2.115291 GGGCCGTCCATCTTCTTGC 61.115 63.158 0.00 0.00 35.00 4.01
4336 7063 2.998949 GGGGCCGTCCATCTTCTT 59.001 61.111 0.00 0.00 37.22 2.52
4337 7064 3.470888 CGGGGCCGTCCATCTTCT 61.471 66.667 0.00 0.00 37.22 2.85
4338 7065 4.547367 CCGGGGCCGTCCATCTTC 62.547 72.222 0.00 0.00 37.81 2.87
4351 7078 3.400054 GGAGACCAAGGTCCCGGG 61.400 72.222 16.85 16.85 45.59 5.73
4363 7090 3.733077 CGTTGTCGTATTGTAGGGGAGAC 60.733 52.174 0.00 0.00 0.00 3.36
4364 7091 2.424601 CGTTGTCGTATTGTAGGGGAGA 59.575 50.000 0.00 0.00 0.00 3.71
4366 7093 1.135024 GCGTTGTCGTATTGTAGGGGA 60.135 52.381 0.00 0.00 39.49 4.81
4368 7095 1.924524 CAGCGTTGTCGTATTGTAGGG 59.075 52.381 0.00 0.00 39.49 3.53
4369 7096 1.924524 CCAGCGTTGTCGTATTGTAGG 59.075 52.381 0.00 0.00 39.49 3.18
4371 7098 2.871133 CTCCAGCGTTGTCGTATTGTA 58.129 47.619 0.00 0.00 39.49 2.41
4373 7100 0.370273 GCTCCAGCGTTGTCGTATTG 59.630 55.000 0.00 0.00 39.49 1.90
4374 7101 2.750815 GCTCCAGCGTTGTCGTATT 58.249 52.632 0.00 0.00 39.49 1.89
4375 7102 4.496670 GCTCCAGCGTTGTCGTAT 57.503 55.556 0.00 0.00 39.49 3.06
4385 7112 2.033141 TGGAAGTGCAGCTCCAGC 59.967 61.111 11.84 0.00 42.49 4.85
4386 7113 2.031516 CGTGGAAGTGCAGCTCCAG 61.032 63.158 15.50 7.66 32.30 3.86
4387 7114 2.031012 CGTGGAAGTGCAGCTCCA 59.969 61.111 11.84 11.84 0.00 3.86
4388 7115 3.426568 GCGTGGAAGTGCAGCTCC 61.427 66.667 7.01 7.01 0.00 4.70
4389 7116 3.426568 GGCGTGGAAGTGCAGCTC 61.427 66.667 0.00 0.00 0.00 4.09
4397 7124 4.473520 ATCAGCGGGGCGTGGAAG 62.474 66.667 0.00 0.00 0.00 3.46
4398 7125 4.467084 GATCAGCGGGGCGTGGAA 62.467 66.667 0.00 0.00 0.00 3.53
4402 7129 2.514592 CAATGATCAGCGGGGCGT 60.515 61.111 0.09 0.00 0.00 5.68
4403 7130 2.514592 ACAATGATCAGCGGGGCG 60.515 61.111 0.09 0.00 0.00 6.13
4404 7131 3.113745 CACAATGATCAGCGGGGC 58.886 61.111 0.09 0.00 0.00 5.80
4405 7132 2.484062 GGCACAATGATCAGCGGGG 61.484 63.158 0.09 0.00 0.00 5.73
4406 7133 2.827051 CGGCACAATGATCAGCGGG 61.827 63.158 0.09 0.00 0.00 6.13
4407 7134 2.711311 CGGCACAATGATCAGCGG 59.289 61.111 0.09 0.00 0.00 5.52
4408 7135 2.108514 ACCGGCACAATGATCAGCG 61.109 57.895 0.00 0.00 0.00 5.18
4409 7136 1.308069 ACACCGGCACAATGATCAGC 61.308 55.000 0.00 0.00 0.00 4.26
4410 7137 0.729116 GACACCGGCACAATGATCAG 59.271 55.000 0.00 0.00 0.00 2.90
4411 7138 0.324614 AGACACCGGCACAATGATCA 59.675 50.000 0.00 0.00 0.00 2.92
4412 7139 1.009829 GAGACACCGGCACAATGATC 58.990 55.000 0.00 0.00 0.00 2.92
4413 7140 0.615331 AGAGACACCGGCACAATGAT 59.385 50.000 0.00 0.00 0.00 2.45
4414 7141 0.396435 AAGAGACACCGGCACAATGA 59.604 50.000 0.00 0.00 0.00 2.57
4415 7142 0.798776 GAAGAGACACCGGCACAATG 59.201 55.000 0.00 0.00 0.00 2.82
4416 7143 0.687354 AGAAGAGACACCGGCACAAT 59.313 50.000 0.00 0.00 0.00 2.71
4418 7145 1.367471 CAGAAGAGACACCGGCACA 59.633 57.895 0.00 0.00 0.00 4.57
4419 7146 0.249911 AACAGAAGAGACACCGGCAC 60.250 55.000 0.00 0.00 0.00 5.01
4420 7147 0.249868 CAACAGAAGAGACACCGGCA 60.250 55.000 0.00 0.00 0.00 5.69
4421 7148 1.569479 GCAACAGAAGAGACACCGGC 61.569 60.000 0.00 0.00 0.00 6.13
4422 7149 1.284982 CGCAACAGAAGAGACACCGG 61.285 60.000 0.00 0.00 0.00 5.28
4423 7150 0.318699 TCGCAACAGAAGAGACACCG 60.319 55.000 0.00 0.00 0.00 4.94
4424 7151 1.269831 ACTCGCAACAGAAGAGACACC 60.270 52.381 0.00 0.00 36.03 4.16
4425 7152 1.789464 CACTCGCAACAGAAGAGACAC 59.211 52.381 0.00 0.00 36.03 3.67
4426 7153 1.681264 TCACTCGCAACAGAAGAGACA 59.319 47.619 0.00 0.00 36.03 3.41
4427 7154 2.423926 TCACTCGCAACAGAAGAGAC 57.576 50.000 0.00 0.00 36.03 3.36
4428 7155 2.414691 CGATCACTCGCAACAGAAGAGA 60.415 50.000 0.00 0.00 38.20 3.10
4429 7156 1.916651 CGATCACTCGCAACAGAAGAG 59.083 52.381 0.00 0.00 38.20 2.85
4430 7157 1.539827 TCGATCACTCGCAACAGAAGA 59.460 47.619 0.00 0.00 44.65 2.87
4431 7158 1.916651 CTCGATCACTCGCAACAGAAG 59.083 52.381 0.00 0.00 44.65 2.85
4432 7159 1.269723 ACTCGATCACTCGCAACAGAA 59.730 47.619 0.00 0.00 44.65 3.02
4433 7160 0.881796 ACTCGATCACTCGCAACAGA 59.118 50.000 0.00 0.00 44.65 3.41
4434 7161 1.263776 GACTCGATCACTCGCAACAG 58.736 55.000 0.00 0.00 44.65 3.16
4435 7162 0.109272 GGACTCGATCACTCGCAACA 60.109 55.000 0.00 0.00 44.65 3.33
4436 7163 1.134530 CGGACTCGATCACTCGCAAC 61.135 60.000 0.00 0.00 44.65 4.17
4437 7164 1.136774 CGGACTCGATCACTCGCAA 59.863 57.895 0.00 0.00 44.65 4.85
4438 7165 2.038837 ACGGACTCGATCACTCGCA 61.039 57.895 0.00 0.00 44.65 5.10
4439 7166 1.583967 CACGGACTCGATCACTCGC 60.584 63.158 0.00 0.00 44.65 5.03
4440 7167 1.004595 TACACGGACTCGATCACTCG 58.995 55.000 0.00 0.00 46.41 4.18
4441 7168 2.008329 AGTACACGGACTCGATCACTC 58.992 52.381 0.00 0.00 40.11 3.51
4442 7169 2.110901 AGTACACGGACTCGATCACT 57.889 50.000 0.00 0.00 40.11 3.41
4443 7170 2.935201 AGTAGTACACGGACTCGATCAC 59.065 50.000 2.52 0.00 40.11 3.06
4444 7171 2.934553 CAGTAGTACACGGACTCGATCA 59.065 50.000 2.52 0.00 40.11 2.92
4445 7172 2.935201 ACAGTAGTACACGGACTCGATC 59.065 50.000 2.52 0.00 40.11 3.69
4446 7173 2.983229 ACAGTAGTACACGGACTCGAT 58.017 47.619 2.52 0.00 40.11 3.59
4447 7174 2.462456 ACAGTAGTACACGGACTCGA 57.538 50.000 2.52 0.00 40.11 4.04
4448 7175 3.515630 TCTACAGTAGTACACGGACTCG 58.484 50.000 7.50 0.00 43.02 4.18
4449 7176 5.869753 TTTCTACAGTAGTACACGGACTC 57.130 43.478 7.50 0.00 0.00 3.36
4450 7177 6.038050 GCTATTTCTACAGTAGTACACGGACT 59.962 42.308 7.50 0.00 0.00 3.85
4451 7178 6.038050 AGCTATTTCTACAGTAGTACACGGAC 59.962 42.308 7.50 0.00 0.00 4.79
4452 7179 6.118170 AGCTATTTCTACAGTAGTACACGGA 58.882 40.000 7.50 0.00 0.00 4.69
4453 7180 6.374565 AGCTATTTCTACAGTAGTACACGG 57.625 41.667 7.50 0.00 0.00 4.94
4454 7181 8.991026 AGATAGCTATTTCTACAGTAGTACACG 58.009 37.037 7.87 0.00 0.00 4.49
4456 7183 9.848710 ACAGATAGCTATTTCTACAGTAGTACA 57.151 33.333 7.87 0.00 0.00 2.90
4458 7185 9.205719 CGACAGATAGCTATTTCTACAGTAGTA 57.794 37.037 7.87 0.00 0.00 1.82
4459 7186 7.932491 TCGACAGATAGCTATTTCTACAGTAGT 59.068 37.037 7.87 0.00 0.00 2.73
4460 7187 8.312896 TCGACAGATAGCTATTTCTACAGTAG 57.687 38.462 7.87 0.47 0.00 2.57
4461 7188 7.095144 GCTCGACAGATAGCTATTTCTACAGTA 60.095 40.741 7.87 0.00 35.80 2.74
4462 7189 6.293735 GCTCGACAGATAGCTATTTCTACAGT 60.294 42.308 7.87 0.00 35.80 3.55
4463 7190 6.083630 GCTCGACAGATAGCTATTTCTACAG 58.916 44.000 7.87 2.46 35.80 2.74
4464 7191 5.531287 TGCTCGACAGATAGCTATTTCTACA 59.469 40.000 7.87 1.75 39.53 2.74
4465 7192 6.003234 TGCTCGACAGATAGCTATTTCTAC 57.997 41.667 7.87 0.00 39.53 2.59
4488 7215 5.305644 TCTCTTCTTCAGTTCTAAGCCAACT 59.694 40.000 0.00 0.00 34.24 3.16
4489 7216 5.542779 TCTCTTCTTCAGTTCTAAGCCAAC 58.457 41.667 0.00 0.00 0.00 3.77
4490 7217 5.540337 TCTCTCTTCTTCAGTTCTAAGCCAA 59.460 40.000 0.00 0.00 0.00 4.52
4491 7218 5.080337 TCTCTCTTCTTCAGTTCTAAGCCA 58.920 41.667 0.00 0.00 0.00 4.75
4492 7219 5.652994 TCTCTCTTCTTCAGTTCTAAGCC 57.347 43.478 0.00 0.00 0.00 4.35
4493 7220 7.319646 TCAATCTCTCTTCTTCAGTTCTAAGC 58.680 38.462 0.00 0.00 0.00 3.09
4494 7221 9.357652 CTTCAATCTCTCTTCTTCAGTTCTAAG 57.642 37.037 0.00 0.00 0.00 2.18
4495 7222 9.083422 TCTTCAATCTCTCTTCTTCAGTTCTAA 57.917 33.333 0.00 0.00 0.00 2.10
4496 7223 8.519526 GTCTTCAATCTCTCTTCTTCAGTTCTA 58.480 37.037 0.00 0.00 0.00 2.10
4497 7224 7.015098 TGTCTTCAATCTCTCTTCTTCAGTTCT 59.985 37.037 0.00 0.00 0.00 3.01
4498 7225 7.151308 TGTCTTCAATCTCTCTTCTTCAGTTC 58.849 38.462 0.00 0.00 0.00 3.01
4499 7226 7.015098 TCTGTCTTCAATCTCTCTTCTTCAGTT 59.985 37.037 0.00 0.00 0.00 3.16
4500 7227 6.493115 TCTGTCTTCAATCTCTCTTCTTCAGT 59.507 38.462 0.00 0.00 0.00 3.41
4501 7228 6.808212 GTCTGTCTTCAATCTCTCTTCTTCAG 59.192 42.308 0.00 0.00 0.00 3.02
4502 7229 6.266330 TGTCTGTCTTCAATCTCTCTTCTTCA 59.734 38.462 0.00 0.00 0.00 3.02
4503 7230 6.686630 TGTCTGTCTTCAATCTCTCTTCTTC 58.313 40.000 0.00 0.00 0.00 2.87
4504 7231 6.493115 TCTGTCTGTCTTCAATCTCTCTTCTT 59.507 38.462 0.00 0.00 0.00 2.52
4505 7232 6.009589 TCTGTCTGTCTTCAATCTCTCTTCT 58.990 40.000 0.00 0.00 0.00 2.85
4506 7233 6.092748 GTCTGTCTGTCTTCAATCTCTCTTC 58.907 44.000 0.00 0.00 0.00 2.87
4507 7234 5.538053 TGTCTGTCTGTCTTCAATCTCTCTT 59.462 40.000 0.00 0.00 0.00 2.85
4508 7235 5.076182 TGTCTGTCTGTCTTCAATCTCTCT 58.924 41.667 0.00 0.00 0.00 3.10
4509 7236 5.384063 TGTCTGTCTGTCTTCAATCTCTC 57.616 43.478 0.00 0.00 0.00 3.20
4510 7237 5.069648 TGTTGTCTGTCTGTCTTCAATCTCT 59.930 40.000 0.00 0.00 0.00 3.10
4511 7238 5.292765 TGTTGTCTGTCTGTCTTCAATCTC 58.707 41.667 0.00 0.00 0.00 2.75
4512 7239 5.282055 TGTTGTCTGTCTGTCTTCAATCT 57.718 39.130 0.00 0.00 0.00 2.40
4513 7240 5.294306 TGTTGTTGTCTGTCTGTCTTCAATC 59.706 40.000 0.00 0.00 0.00 2.67
4514 7241 5.185454 TGTTGTTGTCTGTCTGTCTTCAAT 58.815 37.500 0.00 0.00 0.00 2.57
4515 7242 4.574892 TGTTGTTGTCTGTCTGTCTTCAA 58.425 39.130 0.00 0.00 0.00 2.69
4516 7243 4.200838 TGTTGTTGTCTGTCTGTCTTCA 57.799 40.909 0.00 0.00 0.00 3.02
4517 7244 4.201822 GGTTGTTGTTGTCTGTCTGTCTTC 60.202 45.833 0.00 0.00 0.00 2.87
4518 7245 3.689649 GGTTGTTGTTGTCTGTCTGTCTT 59.310 43.478 0.00 0.00 0.00 3.01
4519 7246 3.270877 GGTTGTTGTTGTCTGTCTGTCT 58.729 45.455 0.00 0.00 0.00 3.41
4520 7247 3.006940 TGGTTGTTGTTGTCTGTCTGTC 58.993 45.455 0.00 0.00 0.00 3.51
4521 7248 3.066291 TGGTTGTTGTTGTCTGTCTGT 57.934 42.857 0.00 0.00 0.00 3.41
4522 7249 4.433186 TTTGGTTGTTGTTGTCTGTCTG 57.567 40.909 0.00 0.00 0.00 3.51
4523 7250 4.082245 CCTTTTGGTTGTTGTTGTCTGTCT 60.082 41.667 0.00 0.00 34.07 3.41
4524 7251 4.173256 CCTTTTGGTTGTTGTTGTCTGTC 58.827 43.478 0.00 0.00 34.07 3.51
4525 7252 3.056179 CCCTTTTGGTTGTTGTTGTCTGT 60.056 43.478 0.00 0.00 38.10 3.41
4526 7253 3.520569 CCCTTTTGGTTGTTGTTGTCTG 58.479 45.455 0.00 0.00 38.10 3.51
4527 7254 2.093711 GCCCTTTTGGTTGTTGTTGTCT 60.094 45.455 0.00 0.00 38.10 3.41
4528 7255 2.276201 GCCCTTTTGGTTGTTGTTGTC 58.724 47.619 0.00 0.00 38.10 3.18
4529 7256 1.625818 TGCCCTTTTGGTTGTTGTTGT 59.374 42.857 0.00 0.00 38.10 3.32
4530 7257 2.278854 CTGCCCTTTTGGTTGTTGTTG 58.721 47.619 0.00 0.00 38.10 3.33
4531 7258 1.209261 CCTGCCCTTTTGGTTGTTGTT 59.791 47.619 0.00 0.00 38.10 2.83
4532 7259 0.829990 CCTGCCCTTTTGGTTGTTGT 59.170 50.000 0.00 0.00 38.10 3.32
4533 7260 0.106521 CCCTGCCCTTTTGGTTGTTG 59.893 55.000 0.00 0.00 38.10 3.33
4534 7261 1.053835 CCCCTGCCCTTTTGGTTGTT 61.054 55.000 0.00 0.00 38.10 2.83
4535 7262 1.459348 CCCCTGCCCTTTTGGTTGT 60.459 57.895 0.00 0.00 38.10 3.32
4536 7263 2.216331 CCCCCTGCCCTTTTGGTTG 61.216 63.158 0.00 0.00 38.10 3.77
4537 7264 2.204034 CCCCCTGCCCTTTTGGTT 59.796 61.111 0.00 0.00 38.10 3.67
4552 7279 4.368565 AAGTCTTTCTTCAGTAACCCCC 57.631 45.455 0.00 0.00 0.00 5.40
4553 7280 4.760715 GGAAAGTCTTTCTTCAGTAACCCC 59.239 45.833 21.72 1.21 39.59 4.95
4554 7281 5.374071 TGGAAAGTCTTTCTTCAGTAACCC 58.626 41.667 21.72 5.57 39.59 4.11
4555 7282 6.710744 TCATGGAAAGTCTTTCTTCAGTAACC 59.289 38.462 21.72 6.20 39.59 2.85
4556 7283 7.730364 TCATGGAAAGTCTTTCTTCAGTAAC 57.270 36.000 21.72 6.23 39.59 2.50
4557 7284 8.924511 AATCATGGAAAGTCTTTCTTCAGTAA 57.075 30.769 21.72 5.84 39.59 2.24
4558 7285 8.924511 AAATCATGGAAAGTCTTTCTTCAGTA 57.075 30.769 21.72 7.76 39.59 2.74
4559 7286 7.830099 AAATCATGGAAAGTCTTTCTTCAGT 57.170 32.000 21.72 6.34 39.59 3.41
4560 7287 8.355169 TGAAAATCATGGAAAGTCTTTCTTCAG 58.645 33.333 21.72 11.49 39.59 3.02
4561 7288 8.236585 TGAAAATCATGGAAAGTCTTTCTTCA 57.763 30.769 21.72 17.89 39.59 3.02
4586 7313 5.048991 GTCTTCATGACCGGTAAACAAACAT 60.049 40.000 7.34 1.08 39.69 2.71
4587 7314 4.273969 GTCTTCATGACCGGTAAACAAACA 59.726 41.667 7.34 0.00 39.69 2.83
4588 7315 4.514066 AGTCTTCATGACCGGTAAACAAAC 59.486 41.667 7.34 0.74 46.46 2.93
4595 7324 6.045072 ACATTTTAGTCTTCATGACCGGTA 57.955 37.500 7.34 0.00 46.46 4.02
4597 7326 6.978343 TTACATTTTAGTCTTCATGACCGG 57.022 37.500 0.00 0.00 46.46 5.28
4616 7345 5.833131 AGCTCCTCATTTTCCAGTTTTTACA 59.167 36.000 0.00 0.00 0.00 2.41
4617 7346 6.332735 AGCTCCTCATTTTCCAGTTTTTAC 57.667 37.500 0.00 0.00 0.00 2.01
4619 7348 6.976934 TTAGCTCCTCATTTTCCAGTTTTT 57.023 33.333 0.00 0.00 0.00 1.94
4621 7350 6.976934 TTTTAGCTCCTCATTTTCCAGTTT 57.023 33.333 0.00 0.00 0.00 2.66
4622 7351 6.976934 TTTTTAGCTCCTCATTTTCCAGTT 57.023 33.333 0.00 0.00 0.00 3.16
4868 7672 3.832527 AGGTTTGGAAGCTATGTGTTGT 58.167 40.909 0.00 0.00 37.49 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.