Multiple sequence alignment - TraesCS1B01G270600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G270600 chr1B 100.000 6356 0 0 1 6356 476014431 476020786 0.000000e+00 11738.0
1 TraesCS1B01G270600 chr1D 97.704 2744 43 7 1696 4426 354456156 354458892 0.000000e+00 4700.0
2 TraesCS1B01G270600 chr1D 95.510 1626 39 8 1 1595 354454538 354456160 0.000000e+00 2567.0
3 TraesCS1B01G270600 chr1D 95.548 1168 37 8 4631 5789 354459501 354460662 0.000000e+00 1855.0
4 TraesCS1B01G270600 chr1D 97.073 615 9 2 4377 4982 354458892 354459506 0.000000e+00 1027.0
5 TraesCS1B01G270600 chr1D 90.909 66 5 1 6260 6325 354464261 354464325 3.160000e-13 87.9
6 TraesCS1B01G270600 chr1D 93.617 47 2 1 5092 5138 268931713 268931668 1.140000e-07 69.4
7 TraesCS1B01G270600 chr1A 95.771 2530 90 9 3074 5589 454035686 454038212 0.000000e+00 4063.0
8 TraesCS1B01G270600 chr1A 91.567 1340 64 22 1696 3017 454034125 454035433 0.000000e+00 1803.0
9 TraesCS1B01G270600 chr1A 90.210 1001 75 6 616 1595 454033131 454034129 0.000000e+00 1284.0
10 TraesCS1B01G270600 chr1A 91.331 646 26 11 1 623 454032470 454033108 0.000000e+00 856.0
11 TraesCS1B01G270600 chr1A 85.938 256 32 4 5933 6187 541992970 541992718 2.920000e-68 270.0
12 TraesCS1B01G270600 chr1A 85.547 256 31 6 5933 6187 569201716 569201466 4.890000e-66 263.0
13 TraesCS1B01G270600 chr1A 85.490 255 32 4 5933 6185 555395196 555395447 1.760000e-65 261.0
14 TraesCS1B01G270600 chr1A 90.511 137 7 4 1567 1699 5558554 5558420 6.550000e-40 176.0
15 TraesCS1B01G270600 chr1A 93.750 48 2 1 5092 5139 333919528 333919574 3.180000e-08 71.3
16 TraesCS1B01G270600 chr5D 89.020 255 26 2 5933 6187 423244285 423244537 1.330000e-81 315.0
17 TraesCS1B01G270600 chr5D 82.171 258 40 5 5933 6187 526753148 526753402 3.860000e-52 217.0
18 TraesCS1B01G270600 chr5D 95.000 120 6 0 1592 1711 408792001 408791882 8.410000e-44 189.0
19 TraesCS1B01G270600 chr6D 88.095 252 27 3 5933 6184 18859660 18859412 4.820000e-76 296.0
20 TraesCS1B01G270600 chr6D 97.345 113 3 0 1590 1702 397359925 397359813 6.500000e-45 193.0
21 TraesCS1B01G270600 chr3D 87.402 254 30 2 5934 6187 310908458 310908709 2.240000e-74 291.0
22 TraesCS1B01G270600 chr7A 84.496 258 35 3 5937 6190 32934959 32934703 3.800000e-62 250.0
23 TraesCS1B01G270600 chr4A 85.903 227 27 5 5933 6158 665180154 665180376 2.960000e-58 237.0
24 TraesCS1B01G270600 chr2D 99.091 110 1 0 1593 1702 617397857 617397748 1.400000e-46 198.0
25 TraesCS1B01G270600 chr2D 96.522 115 3 1 1592 1705 176518011 176518125 8.410000e-44 189.0
26 TraesCS1B01G270600 chr2D 87.500 56 7 0 5084 5139 83543625 83543680 1.480000e-06 65.8
27 TraesCS1B01G270600 chr2B 95.968 124 2 2 1590 1711 501608020 501608142 1.400000e-46 198.0
28 TraesCS1B01G270600 chr2B 97.248 109 3 0 1591 1699 43851199 43851091 1.090000e-42 185.0
29 TraesCS1B01G270600 chr2B 95.495 111 3 2 1589 1699 173839168 173839060 6.550000e-40 176.0
30 TraesCS1B01G270600 chr6B 96.610 118 2 2 1584 1701 460495295 460495410 1.810000e-45 195.0
31 TraesCS1B01G270600 chr6B 92.481 133 7 3 1579 1710 31685152 31685282 3.030000e-43 187.0
32 TraesCS1B01G270600 chr6B 89.583 48 4 1 5092 5139 662506609 662506655 6.880000e-05 60.2
33 TraesCS1B01G270600 chr5B 95.763 118 5 0 1590 1707 474610258 474610375 2.340000e-44 191.0
34 TraesCS1B01G270600 chr5B 92.857 56 3 1 5084 5139 22817668 22817722 5.280000e-11 80.5
35 TraesCS1B01G270600 chr4B 93.548 124 7 1 1587 1710 87011417 87011539 3.910000e-42 183.0
36 TraesCS1B01G270600 chr4D 95.402 87 4 0 4358 4444 99662494 99662408 8.590000e-29 139.0
37 TraesCS1B01G270600 chr7D 94.382 89 5 0 4356 4444 167548509 167548421 3.090000e-28 137.0
38 TraesCS1B01G270600 chr3B 92.632 95 5 2 4354 4448 65214146 65214054 1.110000e-27 135.0
39 TraesCS1B01G270600 chr3B 93.478 92 5 1 4360 4451 284678842 284678932 1.110000e-27 135.0
40 TraesCS1B01G270600 chr3B 95.294 85 4 0 4361 4445 809833041 809833125 1.110000e-27 135.0
41 TraesCS1B01G270600 chr2A 93.407 91 6 0 4354 4444 632952902 632952992 1.110000e-27 135.0
42 TraesCS1B01G270600 chr2A 88.158 76 8 1 5091 5165 55565759 55565684 8.780000e-14 89.8
43 TraesCS1B01G270600 chr6A 89.583 48 4 1 5092 5139 586040224 586040270 6.880000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G270600 chr1B 476014431 476020786 6355 False 11738.00 11738 100.00000 1 6356 1 chr1B.!!$F1 6355
1 TraesCS1B01G270600 chr1D 354454538 354464325 9787 False 2047.38 4700 95.34880 1 6325 5 chr1D.!!$F1 6324
2 TraesCS1B01G270600 chr1A 454032470 454038212 5742 False 2001.50 4063 92.21975 1 5589 4 chr1A.!!$F3 5588

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
381 412 0.179134 CTACGAAGAGCCAGGGAACG 60.179 60.000 0.00 0.00 0.00 3.95 F
1609 1695 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30 F
1691 1777 1.002201 TGGCAAGTAATTCCGAACGGA 59.998 47.619 12.04 12.04 43.52 4.69 F
1699 1785 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73 F
2384 2482 2.054799 ACCCTTGCCACTCTCTAACAA 58.945 47.619 0.00 0.00 0.00 2.83 F
3435 3734 1.656587 TCCTGATGCTGGTAAGTGGT 58.343 50.000 0.00 0.00 0.00 4.16 F
4307 4619 2.373335 TGGCCTGTGCTTTTTAAGGA 57.627 45.000 3.32 0.00 37.74 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1681 1767 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30 R
3357 3656 1.953559 AGCGTTTCAGAAGCAAGTCA 58.046 45.000 0.00 0.00 0.00 3.41 R
3383 3682 5.041940 GCATCTGAAATTGCCAAGAGAATC 58.958 41.667 0.00 0.00 32.66 2.52 R
3435 3734 8.114331 AGACAAAAGCACATTGATTCAGAATA 57.886 30.769 0.00 0.00 0.00 1.75 R
4202 4505 0.324738 TGGGAGCACAGGAGAGTAGG 60.325 60.000 0.00 0.00 0.00 3.18 R
4444 4805 1.000607 TGTGGCTACGACTGAACACTC 60.001 52.381 0.00 0.00 0.00 3.51 R
6141 6910 0.178903 AGGTACTCCCAGTGCTCCAA 60.179 55.000 0.00 0.00 34.66 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 1.376553 GTGAAGCTCACCTCTGCCC 60.377 63.158 5.33 0.00 41.37 5.36
169 180 4.209288 CGGAAATCGATGGACATCTGTTAC 59.791 45.833 0.00 2.33 42.43 2.50
209 220 3.367321 TGTGTACGTATGGGGAATCTGA 58.633 45.455 0.00 0.00 0.00 3.27
223 234 4.628333 GGGAATCTGATTGTGCAAATGTTG 59.372 41.667 7.78 0.00 0.00 3.33
381 412 0.179134 CTACGAAGAGCCAGGGAACG 60.179 60.000 0.00 0.00 0.00 3.95
387 418 3.553095 GAGCCAGGGAACGCACCTT 62.553 63.158 0.00 0.00 35.78 3.50
405 436 3.269381 ACCTTGAGGATAAGAATTGGCCA 59.731 43.478 0.00 0.00 38.94 5.36
556 588 7.633621 AGACAATTGTTGAATGATAGCATACG 58.366 34.615 13.36 0.00 33.44 3.06
576 608 7.043325 GCATACGTACTTCTATCAAGGAACAAG 60.043 40.741 0.00 0.00 0.00 3.16
711 775 4.202233 TGTCCATGTGTCGTACCTGTTTTA 60.202 41.667 0.00 0.00 0.00 1.52
715 780 4.389890 TGTGTCGTACCTGTTTTACTGT 57.610 40.909 0.00 0.00 0.00 3.55
742 807 8.585189 AATCTCTTCAAAAGATTGTTTTCTGC 57.415 30.769 0.00 0.00 40.94 4.26
748 813 5.291614 TCAAAAGATTGTTTTCTGCAAGCAC 59.708 36.000 0.00 0.00 37.79 4.40
834 899 6.094603 ACAGTACCTCATCTTCATTGCAATTC 59.905 38.462 9.83 0.00 0.00 2.17
958 1029 6.775708 TGCTGTTATCCTGTACTTACCTTTT 58.224 36.000 0.00 0.00 0.00 2.27
1030 1101 3.046374 AGTGAACCACTCCAGGTAAAGT 58.954 45.455 0.00 0.00 41.21 2.66
1055 1126 4.412207 AGCGTCAGTTTTTGTTGTTTCTC 58.588 39.130 0.00 0.00 0.00 2.87
1097 1168 6.293735 GGATTGGTGTATTGTTCTTCACGAAA 60.294 38.462 0.00 0.00 33.78 3.46
1110 1181 4.218200 TCTTCACGAAACGGTAGGATAACA 59.782 41.667 0.00 0.00 0.00 2.41
1313 1399 1.808891 GCGTAACCCTTGCGGATACAT 60.809 52.381 0.00 0.00 39.34 2.29
1331 1417 1.135315 CATGGGTTGATGGCAGTTTCG 60.135 52.381 0.00 0.00 0.00 3.46
1380 1466 6.696441 ATCTGAATGCTCTCATTTTTCTCC 57.304 37.500 0.00 0.00 42.60 3.71
1595 1681 9.337396 CTCTCATTTCTATGTGTCTCTAGTACT 57.663 37.037 0.00 0.00 33.34 2.73
1596 1682 9.332502 TCTCATTTCTATGTGTCTCTAGTACTC 57.667 37.037 0.00 0.00 33.34 2.59
1597 1683 8.453238 TCATTTCTATGTGTCTCTAGTACTCC 57.547 38.462 0.00 0.00 33.34 3.85
1598 1684 7.502895 TCATTTCTATGTGTCTCTAGTACTCCC 59.497 40.741 0.00 0.00 33.34 4.30
1599 1685 6.578313 TTCTATGTGTCTCTAGTACTCCCT 57.422 41.667 0.00 0.00 0.00 4.20
1600 1686 6.177310 TCTATGTGTCTCTAGTACTCCCTC 57.823 45.833 0.00 0.00 0.00 4.30
1601 1687 3.648507 TGTGTCTCTAGTACTCCCTCC 57.351 52.381 0.00 0.00 0.00 4.30
1602 1688 2.093075 TGTGTCTCTAGTACTCCCTCCG 60.093 54.545 0.00 0.00 0.00 4.63
1603 1689 2.093021 GTGTCTCTAGTACTCCCTCCGT 60.093 54.545 0.00 0.00 0.00 4.69
1604 1690 2.575279 TGTCTCTAGTACTCCCTCCGTT 59.425 50.000 0.00 0.00 0.00 4.44
1605 1691 3.205338 GTCTCTAGTACTCCCTCCGTTC 58.795 54.545 0.00 0.00 0.00 3.95
1606 1692 2.158986 TCTCTAGTACTCCCTCCGTTCG 60.159 54.545 0.00 0.00 0.00 3.95
1607 1693 1.134280 TCTAGTACTCCCTCCGTTCGG 60.134 57.143 0.00 4.74 0.00 4.30
1608 1694 0.911769 TAGTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
1609 1695 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
1610 1696 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
1611 1697 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
1612 1698 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1613 1699 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1614 1700 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1615 1701 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
1616 1702 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
1617 1703 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
1618 1704 2.448219 CTCCGTTCGGAATTACTCGTC 58.552 52.381 14.79 0.00 33.41 4.20
1619 1705 1.133025 TCCGTTCGGAATTACTCGTCC 59.867 52.381 11.66 0.00 0.00 4.79
1620 1706 1.135315 CCGTTCGGAATTACTCGTCCA 60.135 52.381 5.19 0.00 33.10 4.02
1621 1707 2.598589 CGTTCGGAATTACTCGTCCAA 58.401 47.619 0.00 0.00 33.10 3.53
1622 1708 2.597305 CGTTCGGAATTACTCGTCCAAG 59.403 50.000 0.00 0.00 33.10 3.61
1623 1709 3.671433 CGTTCGGAATTACTCGTCCAAGA 60.671 47.826 0.00 0.00 33.10 3.02
1624 1710 4.240096 GTTCGGAATTACTCGTCCAAGAA 58.760 43.478 0.00 0.00 33.10 2.52
1625 1711 4.524316 TCGGAATTACTCGTCCAAGAAA 57.476 40.909 0.00 0.00 33.10 2.52
1626 1712 5.080969 TCGGAATTACTCGTCCAAGAAAT 57.919 39.130 0.00 0.00 33.10 2.17
1627 1713 4.868171 TCGGAATTACTCGTCCAAGAAATG 59.132 41.667 0.00 0.00 33.10 2.32
1628 1714 4.868171 CGGAATTACTCGTCCAAGAAATGA 59.132 41.667 0.00 0.00 33.10 2.57
1629 1715 5.350365 CGGAATTACTCGTCCAAGAAATGAA 59.650 40.000 0.00 0.00 33.10 2.57
1630 1716 6.037172 CGGAATTACTCGTCCAAGAAATGAAT 59.963 38.462 0.00 0.00 33.10 2.57
1631 1717 7.189512 GGAATTACTCGTCCAAGAAATGAATG 58.810 38.462 0.00 0.00 33.79 2.67
1632 1718 7.148239 GGAATTACTCGTCCAAGAAATGAATGT 60.148 37.037 0.00 0.00 33.79 2.71
1633 1719 8.786826 AATTACTCGTCCAAGAAATGAATGTA 57.213 30.769 0.00 0.00 0.00 2.29
1634 1720 8.964476 ATTACTCGTCCAAGAAATGAATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
1635 1721 6.910536 ACTCGTCCAAGAAATGAATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
1636 1722 6.644347 ACTCGTCCAAGAAATGAATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
1637 1723 7.782049 ACTCGTCCAAGAAATGAATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
1638 1724 7.923344 ACTCGTCCAAGAAATGAATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
1639 1725 8.007405 TCGTCCAAGAAATGAATGTATCTAGA 57.993 34.615 0.00 0.00 0.00 2.43
1640 1726 8.642432 TCGTCCAAGAAATGAATGTATCTAGAT 58.358 33.333 10.73 10.73 0.00 1.98
1641 1727 8.706936 CGTCCAAGAAATGAATGTATCTAGATG 58.293 37.037 15.79 0.00 0.00 2.90
1642 1728 9.553064 GTCCAAGAAATGAATGTATCTAGATGT 57.447 33.333 15.79 0.00 0.00 3.06
1674 1760 8.028938 AGTTGTAGATACATTCATTTTTGTGGC 58.971 33.333 0.00 0.00 35.89 5.01
1675 1761 7.459795 TGTAGATACATTCATTTTTGTGGCA 57.540 32.000 0.00 0.00 0.00 4.92
1676 1762 7.890515 TGTAGATACATTCATTTTTGTGGCAA 58.109 30.769 0.00 0.00 0.00 4.52
1677 1763 8.028354 TGTAGATACATTCATTTTTGTGGCAAG 58.972 33.333 0.00 0.00 0.00 4.01
1678 1764 6.996509 AGATACATTCATTTTTGTGGCAAGT 58.003 32.000 0.00 0.00 0.00 3.16
1679 1765 8.121305 AGATACATTCATTTTTGTGGCAAGTA 57.879 30.769 0.00 0.00 0.00 2.24
1680 1766 8.584157 AGATACATTCATTTTTGTGGCAAGTAA 58.416 29.630 0.00 0.00 0.00 2.24
1681 1767 9.369904 GATACATTCATTTTTGTGGCAAGTAAT 57.630 29.630 0.00 0.00 0.00 1.89
1682 1768 9.723601 ATACATTCATTTTTGTGGCAAGTAATT 57.276 25.926 0.00 0.00 0.00 1.40
1683 1769 8.086851 ACATTCATTTTTGTGGCAAGTAATTC 57.913 30.769 0.00 0.00 0.00 2.17
1684 1770 7.173047 ACATTCATTTTTGTGGCAAGTAATTCC 59.827 33.333 0.00 0.00 0.00 3.01
1685 1771 5.226396 TCATTTTTGTGGCAAGTAATTCCG 58.774 37.500 0.00 0.00 0.00 4.30
1686 1772 4.920640 TTTTTGTGGCAAGTAATTCCGA 57.079 36.364 0.00 0.00 0.00 4.55
1687 1773 4.920640 TTTTGTGGCAAGTAATTCCGAA 57.079 36.364 0.00 0.00 0.00 4.30
1688 1774 3.907894 TTGTGGCAAGTAATTCCGAAC 57.092 42.857 0.00 0.00 0.00 3.95
1689 1775 1.801771 TGTGGCAAGTAATTCCGAACG 59.198 47.619 0.00 0.00 0.00 3.95
1690 1776 1.129811 GTGGCAAGTAATTCCGAACGG 59.870 52.381 6.94 6.94 0.00 4.44
1691 1777 1.002201 TGGCAAGTAATTCCGAACGGA 59.998 47.619 12.04 12.04 43.52 4.69
1692 1778 1.664151 GGCAAGTAATTCCGAACGGAG 59.336 52.381 15.34 4.35 46.06 4.63
1693 1779 1.664151 GCAAGTAATTCCGAACGGAGG 59.336 52.381 15.34 3.40 46.06 4.30
1694 1780 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1695 1781 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1696 1782 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1697 1783 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
1698 1784 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
1699 1785 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
1875 1961 2.730934 ATCCTCTTGTGAGCATGCAT 57.269 45.000 21.98 4.75 38.93 3.96
2041 2127 4.349636 TGGAAGTGTCTCTATTTTGTCCCA 59.650 41.667 0.00 0.00 0.00 4.37
2146 2244 5.023452 TGAGGCTGTCTTTGAGAAGGTATA 58.977 41.667 0.00 0.00 33.56 1.47
2147 2245 5.663106 TGAGGCTGTCTTTGAGAAGGTATAT 59.337 40.000 0.00 0.00 33.56 0.86
2148 2246 6.839134 TGAGGCTGTCTTTGAGAAGGTATATA 59.161 38.462 0.00 0.00 33.56 0.86
2149 2247 7.510685 TGAGGCTGTCTTTGAGAAGGTATATAT 59.489 37.037 0.00 0.00 33.56 0.86
2150 2248 8.958060 AGGCTGTCTTTGAGAAGGTATATATA 57.042 34.615 0.00 0.00 33.56 0.86
2220 2318 5.616488 TTACTTTTGCGAACTATGGAACC 57.384 39.130 0.00 0.00 0.00 3.62
2370 2468 5.068460 TCTGTTGTGAAAACCATTACCCTTG 59.932 40.000 0.00 0.00 0.00 3.61
2384 2482 2.054799 ACCCTTGCCACTCTCTAACAA 58.945 47.619 0.00 0.00 0.00 2.83
2739 2837 3.928375 TCCGTATTTAGGCTCGTTTTGTC 59.072 43.478 0.00 0.00 0.00 3.18
2740 2838 3.680937 CCGTATTTAGGCTCGTTTTGTCA 59.319 43.478 0.00 0.00 0.00 3.58
2945 3048 3.626028 AGCGTTTGAACCAAATGAGAC 57.374 42.857 13.87 0.00 41.31 3.36
2985 3088 9.169468 CGCAATACCAAATGTTGTATTAATCTC 57.831 33.333 0.00 0.00 32.21 2.75
3017 3139 6.940867 CAGATGGAAATCATATCACCAGATGT 59.059 38.462 0.00 0.00 35.97 3.06
3357 3656 7.973944 GTCCTTTTTCTGTATGTTCACTTGTTT 59.026 33.333 0.00 0.00 0.00 2.83
3435 3734 1.656587 TCCTGATGCTGGTAAGTGGT 58.343 50.000 0.00 0.00 0.00 4.16
3786 4087 2.574006 TCCTCTTTCTGCTGCACATT 57.426 45.000 0.00 0.00 0.00 2.71
3883 4184 6.278363 CCAAATAGATCTTGCTCAATTTGGG 58.722 40.000 25.21 14.03 44.83 4.12
4307 4619 2.373335 TGGCCTGTGCTTTTTAAGGA 57.627 45.000 3.32 0.00 37.74 3.36
4323 4635 3.756933 AAGGACATGTTTGCTTTGCAT 57.243 38.095 0.00 0.00 38.76 3.96
4444 4805 8.251383 TCCTATATTTCTTTACAGAGGGAGTG 57.749 38.462 0.00 0.00 0.00 3.51
4778 5495 7.870826 TGATGAGTTAATTACAAACCTGTGTG 58.129 34.615 0.00 0.00 36.96 3.82
4890 5607 5.590530 GATGTCTGTCATCTAGGAGTTGT 57.409 43.478 7.50 0.00 46.64 3.32
4935 5656 4.240096 GTGGAAATGACCATTGCAAAGAG 58.760 43.478 1.71 0.00 42.17 2.85
4991 5712 4.960938 TGAACCATCCATGATGCTAGTAC 58.039 43.478 0.00 0.00 38.59 2.73
5022 5743 3.782889 AAAGTGGTTCTGTGCAAGTTC 57.217 42.857 0.00 0.00 0.00 3.01
5289 6010 1.172812 ACTCCGTGGCAAAAGCTTCC 61.173 55.000 0.00 0.00 0.00 3.46
5325 6046 4.853924 TGATTCAAAGGCCAAGAAAGAC 57.146 40.909 5.01 3.34 0.00 3.01
5409 6132 1.206849 TGAGTTGCTCATGCCGTCATA 59.793 47.619 0.00 0.00 35.39 2.15
5413 6136 1.882625 GCTCATGCCGTCATACGCA 60.883 57.895 0.00 0.00 40.91 5.24
5510 6236 5.899299 AGATGCTATTTTGGCTGTGAATTC 58.101 37.500 0.00 0.00 0.00 2.17
5642 6372 9.185192 GGATATATTTTGAAAATTGCTTCCGAG 57.815 33.333 8.60 0.00 0.00 4.63
5648 6378 3.888930 TGAAAATTGCTTCCGAGGTTCTT 59.111 39.130 0.00 0.00 0.00 2.52
5649 6379 4.023193 TGAAAATTGCTTCCGAGGTTCTTC 60.023 41.667 0.00 0.00 0.00 2.87
5650 6380 3.425162 AATTGCTTCCGAGGTTCTTCT 57.575 42.857 0.00 0.00 0.00 2.85
5658 6388 0.532573 CGAGGTTCTTCTAGCTGGCA 59.467 55.000 0.00 0.00 0.00 4.92
5659 6389 1.137872 CGAGGTTCTTCTAGCTGGCAT 59.862 52.381 0.00 0.00 0.00 4.40
5689 6419 8.071368 TGCGCGACATGAATATATATTCGTATA 58.929 33.333 23.61 11.33 43.80 1.47
5726 6456 0.611200 TGCCTGTGCACCGTATAGTT 59.389 50.000 15.69 0.00 44.23 2.24
5733 6463 1.014352 GCACCGTATAGTTGGCCTTG 58.986 55.000 3.32 0.00 0.00 3.61
5750 6480 0.385029 TTGGTCTCCGTCGAACGAAA 59.615 50.000 8.63 0.00 46.05 3.46
5752 6482 1.000060 TGGTCTCCGTCGAACGAAAAT 60.000 47.619 8.63 0.00 46.05 1.82
5753 6483 2.064014 GGTCTCCGTCGAACGAAAATT 58.936 47.619 8.63 0.00 46.05 1.82
5754 6484 2.159881 GGTCTCCGTCGAACGAAAATTG 60.160 50.000 8.63 0.00 46.05 2.32
5780 6511 2.533266 ACAGTAGTGTGGTCTGCAAG 57.467 50.000 1.37 0.00 34.75 4.01
5807 6576 2.369394 CTGTAAGGGGCTTGTTCATCC 58.631 52.381 0.00 0.00 0.00 3.51
5808 6577 1.005450 TGTAAGGGGCTTGTTCATCCC 59.995 52.381 0.00 0.00 39.67 3.85
5809 6578 0.254747 TAAGGGGCTTGTTCATCCCG 59.745 55.000 0.00 0.00 43.92 5.14
5810 6579 2.440247 GGGGCTTGTTCATCCCGG 60.440 66.667 0.00 0.00 40.97 5.73
5811 6580 2.440247 GGGCTTGTTCATCCCGGG 60.440 66.667 16.85 16.85 0.00 5.73
5812 6581 2.674754 GGCTTGTTCATCCCGGGA 59.325 61.111 29.18 29.18 0.00 5.14
5813 6582 1.001393 GGCTTGTTCATCCCGGGAA 60.001 57.895 30.84 9.63 0.00 3.97
5814 6583 0.610785 GGCTTGTTCATCCCGGGAAA 60.611 55.000 30.84 16.41 0.00 3.13
5815 6584 1.253100 GCTTGTTCATCCCGGGAAAA 58.747 50.000 30.84 22.02 0.00 2.29
5816 6585 1.616374 GCTTGTTCATCCCGGGAAAAA 59.384 47.619 30.84 21.63 0.00 1.94
5817 6586 2.352715 GCTTGTTCATCCCGGGAAAAAG 60.353 50.000 30.84 22.29 40.83 2.27
5818 6587 2.668144 TGTTCATCCCGGGAAAAAGT 57.332 45.000 30.84 7.71 0.00 2.66
5819 6588 3.791953 TGTTCATCCCGGGAAAAAGTA 57.208 42.857 30.84 13.26 0.00 2.24
5820 6589 4.310022 TGTTCATCCCGGGAAAAAGTAT 57.690 40.909 30.84 5.84 0.00 2.12
5821 6590 4.266714 TGTTCATCCCGGGAAAAAGTATC 58.733 43.478 30.84 12.64 0.00 2.24
5822 6591 3.570912 TCATCCCGGGAAAAAGTATCC 57.429 47.619 30.84 0.00 36.16 2.59
5823 6592 2.158871 TCATCCCGGGAAAAAGTATCCG 60.159 50.000 30.84 5.93 41.90 4.18
5827 6596 0.730840 CGGGAAAAAGTATCCGGTGC 59.269 55.000 0.00 0.00 38.93 5.01
5828 6597 1.677820 CGGGAAAAAGTATCCGGTGCT 60.678 52.381 0.00 0.00 38.93 4.40
5829 6598 2.014857 GGGAAAAAGTATCCGGTGCTC 58.985 52.381 0.00 0.00 37.87 4.26
5830 6599 2.014857 GGAAAAAGTATCCGGTGCTCC 58.985 52.381 0.00 0.00 0.00 4.70
5831 6600 2.014857 GAAAAAGTATCCGGTGCTCCC 58.985 52.381 0.00 0.00 0.00 4.30
5832 6601 0.988832 AAAAGTATCCGGTGCTCCCA 59.011 50.000 0.00 0.00 0.00 4.37
5833 6602 0.541863 AAAGTATCCGGTGCTCCCAG 59.458 55.000 0.00 0.00 0.00 4.45
5834 6603 1.972660 AAGTATCCGGTGCTCCCAGC 61.973 60.000 0.00 0.00 42.82 4.85
5835 6604 3.161450 TATCCGGTGCTCCCAGCC 61.161 66.667 0.00 0.00 41.51 4.85
5836 6605 3.696518 TATCCGGTGCTCCCAGCCT 62.697 63.158 0.00 0.00 41.51 4.58
5838 6607 3.399181 CCGGTGCTCCCAGCCTTA 61.399 66.667 0.00 0.00 41.51 2.69
5839 6608 2.187946 CGGTGCTCCCAGCCTTAG 59.812 66.667 0.00 0.00 41.51 2.18
5840 6609 2.592308 GGTGCTCCCAGCCTTAGG 59.408 66.667 0.00 0.00 41.51 2.69
5841 6610 1.995626 GGTGCTCCCAGCCTTAGGA 60.996 63.158 0.69 0.00 41.51 2.94
5842 6611 1.348775 GGTGCTCCCAGCCTTAGGAT 61.349 60.000 0.69 0.00 41.51 3.24
5843 6612 1.424638 GTGCTCCCAGCCTTAGGATA 58.575 55.000 0.69 0.00 41.51 2.59
5844 6613 1.981495 GTGCTCCCAGCCTTAGGATAT 59.019 52.381 0.69 0.00 41.51 1.63
5845 6614 2.373502 GTGCTCCCAGCCTTAGGATATT 59.626 50.000 0.69 0.00 41.51 1.28
5846 6615 2.639839 TGCTCCCAGCCTTAGGATATTC 59.360 50.000 0.69 0.00 41.51 1.75
5847 6616 2.026729 GCTCCCAGCCTTAGGATATTCC 60.027 54.545 0.69 0.00 34.48 3.01
5848 6617 4.335485 GCTCCCAGCCTTAGGATATTCCT 61.335 52.174 0.69 1.06 42.26 3.36
5849 6618 6.383485 GCTCCCAGCCTTAGGATATTCCTG 62.383 54.167 0.69 0.00 40.64 3.86
5861 6630 5.568620 GGATATTCCTGGTACTCCAATGT 57.431 43.478 0.00 0.00 43.81 2.71
5862 6631 5.552178 GGATATTCCTGGTACTCCAATGTC 58.448 45.833 0.00 0.00 43.81 3.06
5863 6632 5.071788 GGATATTCCTGGTACTCCAATGTCA 59.928 44.000 0.00 0.00 43.81 3.58
5864 6633 4.927267 ATTCCTGGTACTCCAATGTCAA 57.073 40.909 0.00 0.00 43.81 3.18
5865 6634 4.715534 TTCCTGGTACTCCAATGTCAAA 57.284 40.909 0.00 0.00 43.81 2.69
5866 6635 4.715534 TCCTGGTACTCCAATGTCAAAA 57.284 40.909 0.00 0.00 43.81 2.44
5867 6636 5.055265 TCCTGGTACTCCAATGTCAAAAA 57.945 39.130 0.00 0.00 43.81 1.94
5925 6694 7.844493 AAATGGTGGATGCTATAATGAATGT 57.156 32.000 0.00 0.00 0.00 2.71
5926 6695 6.829229 ATGGTGGATGCTATAATGAATGTG 57.171 37.500 0.00 0.00 0.00 3.21
5927 6696 5.939447 TGGTGGATGCTATAATGAATGTGA 58.061 37.500 0.00 0.00 0.00 3.58
5928 6697 5.764686 TGGTGGATGCTATAATGAATGTGAC 59.235 40.000 0.00 0.00 0.00 3.67
5929 6698 6.000219 GGTGGATGCTATAATGAATGTGACT 59.000 40.000 0.00 0.00 0.00 3.41
5930 6699 7.161404 GGTGGATGCTATAATGAATGTGACTA 58.839 38.462 0.00 0.00 0.00 2.59
5931 6700 7.118390 GGTGGATGCTATAATGAATGTGACTAC 59.882 40.741 0.00 0.00 0.00 2.73
5932 6701 7.657354 GTGGATGCTATAATGAATGTGACTACA 59.343 37.037 0.00 0.00 41.89 2.74
5933 6702 8.210265 TGGATGCTATAATGAATGTGACTACAA 58.790 33.333 0.00 0.00 40.84 2.41
5934 6703 9.056005 GGATGCTATAATGAATGTGACTACAAA 57.944 33.333 0.00 0.00 40.84 2.83
5935 6704 9.869844 GATGCTATAATGAATGTGACTACAAAC 57.130 33.333 0.00 0.00 40.84 2.93
5936 6705 8.785329 TGCTATAATGAATGTGACTACAAACA 57.215 30.769 0.00 0.00 40.84 2.83
5937 6706 9.225436 TGCTATAATGAATGTGACTACAAACAA 57.775 29.630 0.00 0.00 40.84 2.83
5943 6712 9.598517 AATGAATGTGACTACAAACAAAAATGT 57.401 25.926 0.00 0.00 40.84 2.71
5944 6713 8.404889 TGAATGTGACTACAAACAAAAATGTG 57.595 30.769 0.00 0.00 40.84 3.21
5945 6714 8.031864 TGAATGTGACTACAAACAAAAATGTGT 58.968 29.630 0.00 0.00 40.84 3.72
5946 6715 9.509855 GAATGTGACTACAAACAAAAATGTGTA 57.490 29.630 0.00 0.00 40.84 2.90
5947 6716 9.862371 AATGTGACTACAAACAAAAATGTGTAA 57.138 25.926 0.00 0.00 40.84 2.41
5949 6718 9.509855 TGTGACTACAAACAAAAATGTGTAATC 57.490 29.630 0.00 0.00 32.88 1.75
5950 6719 9.730420 GTGACTACAAACAAAAATGTGTAATCT 57.270 29.630 0.00 0.00 0.00 2.40
5953 6722 9.893305 ACTACAAACAAAAATGTGTAATCTAGC 57.107 29.630 0.00 0.00 0.00 3.42
5954 6723 9.891828 CTACAAACAAAAATGTGTAATCTAGCA 57.108 29.630 0.00 0.00 0.00 3.49
5956 6725 9.195411 ACAAACAAAAATGTGTAATCTAGCATG 57.805 29.630 0.00 0.00 0.00 4.06
5957 6726 9.409312 CAAACAAAAATGTGTAATCTAGCATGA 57.591 29.630 0.00 0.00 0.00 3.07
5958 6727 9.979578 AAACAAAAATGTGTAATCTAGCATGAA 57.020 25.926 0.00 0.00 0.00 2.57
5964 6733 9.618890 AAATGTGTAATCTAGCATGAATAGTGT 57.381 29.630 0.00 0.00 0.00 3.55
5976 6745 8.621532 AGCATGAATAGTGTAAAGAAAAGACA 57.378 30.769 0.00 0.00 0.00 3.41
5977 6746 9.066892 AGCATGAATAGTGTAAAGAAAAGACAA 57.933 29.630 0.00 0.00 0.00 3.18
5978 6747 9.677567 GCATGAATAGTGTAAAGAAAAGACAAA 57.322 29.630 0.00 0.00 0.00 2.83
5981 6750 9.730420 TGAATAGTGTAAAGAAAAGACAAAAGC 57.270 29.630 0.00 0.00 0.00 3.51
5982 6751 9.730420 GAATAGTGTAAAGAAAAGACAAAAGCA 57.270 29.630 0.00 0.00 0.00 3.91
5984 6753 7.812309 AGTGTAAAGAAAAGACAAAAGCAAC 57.188 32.000 0.00 0.00 0.00 4.17
5985 6754 7.375053 AGTGTAAAGAAAAGACAAAAGCAACA 58.625 30.769 0.00 0.00 0.00 3.33
5986 6755 8.034804 AGTGTAAAGAAAAGACAAAAGCAACAT 58.965 29.630 0.00 0.00 0.00 2.71
5987 6756 8.655970 GTGTAAAGAAAAGACAAAAGCAACATT 58.344 29.630 0.00 0.00 0.00 2.71
5988 6757 8.655092 TGTAAAGAAAAGACAAAAGCAACATTG 58.345 29.630 0.00 0.00 0.00 2.82
5989 6758 7.903995 AAAGAAAAGACAAAAGCAACATTGA 57.096 28.000 0.00 0.00 0.00 2.57
5990 6759 6.892310 AGAAAAGACAAAAGCAACATTGAC 57.108 33.333 0.00 0.00 0.00 3.18
5991 6760 6.397272 AGAAAAGACAAAAGCAACATTGACA 58.603 32.000 0.00 0.00 0.00 3.58
5992 6761 6.311200 AGAAAAGACAAAAGCAACATTGACAC 59.689 34.615 0.00 0.00 0.00 3.67
5993 6762 4.989279 AGACAAAAGCAACATTGACACT 57.011 36.364 0.00 0.00 0.00 3.55
5994 6763 6.449635 AAGACAAAAGCAACATTGACACTA 57.550 33.333 0.00 0.00 0.00 2.74
5995 6764 6.639632 AGACAAAAGCAACATTGACACTAT 57.360 33.333 0.00 0.00 0.00 2.12
5996 6765 7.042797 AGACAAAAGCAACATTGACACTATT 57.957 32.000 0.00 0.00 0.00 1.73
5997 6766 6.919662 AGACAAAAGCAACATTGACACTATTG 59.080 34.615 0.00 0.00 0.00 1.90
5998 6767 6.804677 ACAAAAGCAACATTGACACTATTGA 58.195 32.000 0.00 0.00 0.00 2.57
5999 6768 6.919662 ACAAAAGCAACATTGACACTATTGAG 59.080 34.615 0.00 0.00 0.00 3.02
6000 6769 6.882610 AAAGCAACATTGACACTATTGAGA 57.117 33.333 0.00 0.00 0.00 3.27
6001 6770 7.458409 AAAGCAACATTGACACTATTGAGAT 57.542 32.000 0.00 0.00 0.00 2.75
6002 6771 6.674694 AGCAACATTGACACTATTGAGATC 57.325 37.500 0.00 0.00 0.00 2.75
6003 6772 6.413052 AGCAACATTGACACTATTGAGATCT 58.587 36.000 0.00 0.00 0.00 2.75
6004 6773 6.315642 AGCAACATTGACACTATTGAGATCTG 59.684 38.462 0.00 0.00 0.00 2.90
6005 6774 6.457934 GCAACATTGACACTATTGAGATCTGG 60.458 42.308 0.00 0.00 0.00 3.86
6006 6775 6.550938 ACATTGACACTATTGAGATCTGGA 57.449 37.500 0.00 0.00 0.00 3.86
6007 6776 6.344500 ACATTGACACTATTGAGATCTGGAC 58.656 40.000 0.00 0.00 0.00 4.02
6008 6777 6.155910 ACATTGACACTATTGAGATCTGGACT 59.844 38.462 0.00 0.00 0.00 3.85
6009 6778 7.343057 ACATTGACACTATTGAGATCTGGACTA 59.657 37.037 0.00 0.00 0.00 2.59
6010 6779 6.701145 TGACACTATTGAGATCTGGACTAC 57.299 41.667 0.00 0.00 0.00 2.73
6011 6780 6.427441 TGACACTATTGAGATCTGGACTACT 58.573 40.000 0.00 0.00 0.00 2.57
6012 6781 6.544197 TGACACTATTGAGATCTGGACTACTC 59.456 42.308 0.00 0.00 0.00 2.59
6013 6782 6.668645 ACACTATTGAGATCTGGACTACTCT 58.331 40.000 0.00 0.00 0.00 3.24
6014 6783 7.122715 ACACTATTGAGATCTGGACTACTCTT 58.877 38.462 0.00 0.00 0.00 2.85
6015 6784 7.617723 ACACTATTGAGATCTGGACTACTCTTT 59.382 37.037 0.00 0.00 0.00 2.52
6016 6785 8.474025 CACTATTGAGATCTGGACTACTCTTTT 58.526 37.037 0.00 0.00 0.00 2.27
6017 6786 9.041354 ACTATTGAGATCTGGACTACTCTTTTT 57.959 33.333 0.00 0.00 0.00 1.94
6047 6816 9.834628 TTCTTAATGTACATTTCGATTTTGGAC 57.165 29.630 25.31 0.00 32.50 4.02
6048 6817 8.455682 TCTTAATGTACATTTCGATTTTGGACC 58.544 33.333 25.31 0.00 32.50 4.46
6049 6818 6.834168 AATGTACATTTCGATTTTGGACCT 57.166 33.333 15.47 0.00 0.00 3.85
6050 6819 5.621197 TGTACATTTCGATTTTGGACCTG 57.379 39.130 0.00 0.00 0.00 4.00
6051 6820 5.309638 TGTACATTTCGATTTTGGACCTGA 58.690 37.500 0.00 0.00 0.00 3.86
6052 6821 5.765677 TGTACATTTCGATTTTGGACCTGAA 59.234 36.000 0.00 0.00 0.00 3.02
6053 6822 5.782893 ACATTTCGATTTTGGACCTGAAA 57.217 34.783 0.00 0.00 0.00 2.69
6054 6823 6.345096 ACATTTCGATTTTGGACCTGAAAT 57.655 33.333 6.22 6.22 36.71 2.17
6055 6824 6.758254 ACATTTCGATTTTGGACCTGAAATT 58.242 32.000 7.53 0.00 34.74 1.82
6056 6825 7.216494 ACATTTCGATTTTGGACCTGAAATTT 58.784 30.769 7.53 0.00 34.74 1.82
6057 6826 7.714813 ACATTTCGATTTTGGACCTGAAATTTT 59.285 29.630 7.53 0.00 34.74 1.82
6058 6827 8.558700 CATTTCGATTTTGGACCTGAAATTTTT 58.441 29.630 7.53 0.00 34.74 1.94
6059 6828 9.771534 ATTTCGATTTTGGACCTGAAATTTTTA 57.228 25.926 7.53 0.00 33.57 1.52
6060 6829 8.810652 TTCGATTTTGGACCTGAAATTTTTAG 57.189 30.769 7.53 0.00 0.00 1.85
6061 6830 7.375053 TCGATTTTGGACCTGAAATTTTTAGG 58.625 34.615 16.23 16.23 37.61 2.69
6062 6831 6.589907 CGATTTTGGACCTGAAATTTTTAGGG 59.410 38.462 20.45 8.91 35.89 3.53
6063 6832 5.816955 TTTGGACCTGAAATTTTTAGGGG 57.183 39.130 20.45 9.53 35.89 4.79
6064 6833 4.750833 TGGACCTGAAATTTTTAGGGGA 57.249 40.909 20.45 4.84 35.89 4.81
6065 6834 5.283876 TGGACCTGAAATTTTTAGGGGAT 57.716 39.130 20.45 3.66 35.89 3.85
6066 6835 6.410222 TGGACCTGAAATTTTTAGGGGATA 57.590 37.500 20.45 5.13 35.89 2.59
6067 6836 6.992235 TGGACCTGAAATTTTTAGGGGATAT 58.008 36.000 20.45 3.03 35.89 1.63
6068 6837 8.120256 TGGACCTGAAATTTTTAGGGGATATA 57.880 34.615 20.45 2.60 35.89 0.86
6069 6838 8.224720 TGGACCTGAAATTTTTAGGGGATATAG 58.775 37.037 20.45 0.00 35.89 1.31
6070 6839 8.225416 GGACCTGAAATTTTTAGGGGATATAGT 58.775 37.037 20.45 1.15 35.89 2.12
6071 6840 8.996651 ACCTGAAATTTTTAGGGGATATAGTG 57.003 34.615 20.45 0.00 35.89 2.74
6072 6841 8.787818 ACCTGAAATTTTTAGGGGATATAGTGA 58.212 33.333 20.45 0.00 35.89 3.41
6073 6842 9.067986 CCTGAAATTTTTAGGGGATATAGTGAC 57.932 37.037 11.24 0.00 0.00 3.67
6074 6843 9.627123 CTGAAATTTTTAGGGGATATAGTGACA 57.373 33.333 0.00 0.00 0.00 3.58
6077 6846 9.588096 AAATTTTTAGGGGATATAGTGACATCC 57.412 33.333 0.00 0.00 40.11 3.51
6086 6855 7.964604 GGATATAGTGACATCCCTTGTAAAC 57.035 40.000 0.00 0.00 39.18 2.01
6087 6856 7.506114 GGATATAGTGACATCCCTTGTAAACA 58.494 38.462 0.00 0.00 39.18 2.83
6088 6857 8.157476 GGATATAGTGACATCCCTTGTAAACAT 58.843 37.037 0.00 0.00 39.18 2.71
6089 6858 9.561069 GATATAGTGACATCCCTTGTAAACATT 57.439 33.333 0.00 0.00 39.18 2.71
6090 6859 7.865706 ATAGTGACATCCCTTGTAAACATTC 57.134 36.000 0.00 0.00 39.18 2.67
6091 6860 5.880901 AGTGACATCCCTTGTAAACATTCT 58.119 37.500 0.00 0.00 39.18 2.40
6092 6861 5.940470 AGTGACATCCCTTGTAAACATTCTC 59.060 40.000 0.00 0.00 39.18 2.87
6093 6862 5.705441 GTGACATCCCTTGTAAACATTCTCA 59.295 40.000 0.00 0.00 39.18 3.27
6094 6863 6.375455 GTGACATCCCTTGTAAACATTCTCAT 59.625 38.462 0.00 0.00 39.18 2.90
6095 6864 6.947733 TGACATCCCTTGTAAACATTCTCATT 59.052 34.615 0.00 0.00 39.18 2.57
6096 6865 7.451255 TGACATCCCTTGTAAACATTCTCATTT 59.549 33.333 0.00 0.00 39.18 2.32
6097 6866 8.193953 ACATCCCTTGTAAACATTCTCATTTT 57.806 30.769 0.00 0.00 36.57 1.82
6098 6867 8.650490 ACATCCCTTGTAAACATTCTCATTTTT 58.350 29.630 0.00 0.00 36.57 1.94
6152 6921 3.731652 TTTTTGACATTGGAGCACTGG 57.268 42.857 0.00 0.00 0.00 4.00
6153 6922 1.619654 TTTGACATTGGAGCACTGGG 58.380 50.000 0.00 0.00 0.00 4.45
6154 6923 0.770499 TTGACATTGGAGCACTGGGA 59.230 50.000 0.00 0.00 0.00 4.37
6155 6924 0.325933 TGACATTGGAGCACTGGGAG 59.674 55.000 0.00 0.00 0.00 4.30
6156 6925 0.326264 GACATTGGAGCACTGGGAGT 59.674 55.000 0.00 0.00 0.00 3.85
6157 6926 1.555075 GACATTGGAGCACTGGGAGTA 59.445 52.381 0.00 0.00 0.00 2.59
6158 6927 1.279271 ACATTGGAGCACTGGGAGTAC 59.721 52.381 0.00 0.00 0.00 2.73
6159 6928 0.912486 ATTGGAGCACTGGGAGTACC 59.088 55.000 0.00 0.00 40.81 3.34
6160 6929 0.178903 TTGGAGCACTGGGAGTACCT 60.179 55.000 0.00 0.00 41.11 3.08
6161 6930 0.614979 TGGAGCACTGGGAGTACCTC 60.615 60.000 0.00 0.00 41.11 3.85
6162 6931 0.614979 GGAGCACTGGGAGTACCTCA 60.615 60.000 0.00 0.00 41.11 3.86
6163 6932 1.267121 GAGCACTGGGAGTACCTCAA 58.733 55.000 0.00 0.00 41.11 3.02
6164 6933 1.205893 GAGCACTGGGAGTACCTCAAG 59.794 57.143 0.00 0.00 41.11 3.02
6165 6934 1.203187 AGCACTGGGAGTACCTCAAGA 60.203 52.381 0.00 0.00 41.11 3.02
6166 6935 1.066787 GCACTGGGAGTACCTCAAGAC 60.067 57.143 0.00 0.00 41.11 3.01
6167 6936 2.530701 CACTGGGAGTACCTCAAGACT 58.469 52.381 0.00 0.00 41.11 3.24
6168 6937 2.232452 CACTGGGAGTACCTCAAGACTG 59.768 54.545 0.00 0.00 41.11 3.51
6169 6938 1.827969 CTGGGAGTACCTCAAGACTGG 59.172 57.143 0.00 0.00 41.11 4.00
6170 6939 1.196012 GGGAGTACCTCAAGACTGGG 58.804 60.000 0.00 0.00 35.85 4.45
6171 6940 1.273098 GGGAGTACCTCAAGACTGGGA 60.273 57.143 0.00 0.00 35.85 4.37
6172 6941 2.537143 GGAGTACCTCAAGACTGGGAA 58.463 52.381 0.00 0.00 31.08 3.97
6173 6942 2.234168 GGAGTACCTCAAGACTGGGAAC 59.766 54.545 0.00 0.00 31.08 3.62
6174 6943 2.897969 GAGTACCTCAAGACTGGGAACA 59.102 50.000 0.00 0.00 39.59 3.18
6175 6944 3.515901 GAGTACCTCAAGACTGGGAACAT 59.484 47.826 0.00 0.00 41.51 2.71
6176 6945 3.910627 AGTACCTCAAGACTGGGAACATT 59.089 43.478 0.00 0.00 41.51 2.71
6177 6946 3.146104 ACCTCAAGACTGGGAACATTG 57.854 47.619 0.00 0.00 41.51 2.82
6178 6947 2.224867 ACCTCAAGACTGGGAACATTGG 60.225 50.000 0.00 0.00 41.51 3.16
6179 6948 2.040278 CCTCAAGACTGGGAACATTGGA 59.960 50.000 0.00 0.00 41.51 3.53
6180 6949 3.308688 CCTCAAGACTGGGAACATTGGAT 60.309 47.826 0.00 0.00 41.51 3.41
6181 6950 4.080356 CCTCAAGACTGGGAACATTGGATA 60.080 45.833 0.00 0.00 41.51 2.59
6182 6951 4.843728 TCAAGACTGGGAACATTGGATAC 58.156 43.478 0.00 0.00 41.51 2.24
6183 6952 4.536090 TCAAGACTGGGAACATTGGATACT 59.464 41.667 0.00 0.00 41.51 2.12
6184 6953 5.014123 TCAAGACTGGGAACATTGGATACTT 59.986 40.000 0.00 0.00 41.51 2.24
6185 6954 5.520748 AGACTGGGAACATTGGATACTTT 57.479 39.130 0.00 0.00 41.51 2.66
6186 6955 5.501156 AGACTGGGAACATTGGATACTTTC 58.499 41.667 0.00 0.00 41.51 2.62
6187 6956 5.014123 AGACTGGGAACATTGGATACTTTCA 59.986 40.000 0.00 0.00 41.51 2.69
6188 6957 5.010282 ACTGGGAACATTGGATACTTTCAC 58.990 41.667 0.00 0.00 41.51 3.18
6189 6958 4.991776 TGGGAACATTGGATACTTTCACA 58.008 39.130 0.00 0.00 33.40 3.58
6190 6959 5.579047 TGGGAACATTGGATACTTTCACAT 58.421 37.500 0.00 0.00 33.40 3.21
6191 6960 5.418524 TGGGAACATTGGATACTTTCACATG 59.581 40.000 0.00 0.00 33.40 3.21
6192 6961 5.418840 GGGAACATTGGATACTTTCACATGT 59.581 40.000 0.00 0.00 37.61 3.21
6193 6962 6.071391 GGGAACATTGGATACTTTCACATGTT 60.071 38.462 0.00 0.00 37.61 2.71
6194 6963 6.808212 GGAACATTGGATACTTTCACATGTTG 59.192 38.462 0.00 0.00 37.61 3.33
6195 6964 7.309133 GGAACATTGGATACTTTCACATGTTGA 60.309 37.037 0.00 0.00 37.61 3.18
6196 6965 7.707624 ACATTGGATACTTTCACATGTTGAT 57.292 32.000 0.00 0.00 32.69 2.57
6197 6966 7.765307 ACATTGGATACTTTCACATGTTGATC 58.235 34.615 0.00 0.00 32.69 2.92
6198 6967 6.757897 TTGGATACTTTCACATGTTGATCC 57.242 37.500 0.00 3.30 32.69 3.36
6199 6968 5.192927 TGGATACTTTCACATGTTGATCCC 58.807 41.667 0.00 0.00 30.08 3.85
6200 6969 5.044919 TGGATACTTTCACATGTTGATCCCT 60.045 40.000 0.00 0.00 30.08 4.20
6201 6970 6.157820 TGGATACTTTCACATGTTGATCCCTA 59.842 38.462 0.00 0.00 30.08 3.53
6202 6971 7.147320 TGGATACTTTCACATGTTGATCCCTAT 60.147 37.037 0.00 0.00 30.08 2.57
6203 6972 7.389053 GGATACTTTCACATGTTGATCCCTATC 59.611 40.741 0.00 0.00 32.84 2.08
6204 6973 6.065976 ACTTTCACATGTTGATCCCTATCA 57.934 37.500 0.00 0.00 40.43 2.15
6205 6974 6.666678 ACTTTCACATGTTGATCCCTATCAT 58.333 36.000 0.00 0.00 41.73 2.45
6206 6975 6.544931 ACTTTCACATGTTGATCCCTATCATG 59.455 38.462 0.00 0.00 41.73 3.07
6207 6976 5.635278 TCACATGTTGATCCCTATCATGT 57.365 39.130 0.00 0.00 46.20 3.21
6208 6977 6.745794 TCACATGTTGATCCCTATCATGTA 57.254 37.500 0.00 0.00 44.38 2.29
6209 6978 6.524734 TCACATGTTGATCCCTATCATGTAC 58.475 40.000 0.00 0.00 44.38 2.90
6210 6979 6.327365 TCACATGTTGATCCCTATCATGTACT 59.673 38.462 0.00 0.00 44.38 2.73
6211 6980 7.508977 TCACATGTTGATCCCTATCATGTACTA 59.491 37.037 0.00 0.00 44.38 1.82
6212 6981 7.600375 CACATGTTGATCCCTATCATGTACTAC 59.400 40.741 0.00 0.00 44.38 2.73
6213 6982 6.665992 TGTTGATCCCTATCATGTACTACC 57.334 41.667 0.00 0.00 41.73 3.18
6214 6983 5.542635 TGTTGATCCCTATCATGTACTACCC 59.457 44.000 0.00 0.00 41.73 3.69
6215 6984 5.616975 TGATCCCTATCATGTACTACCCT 57.383 43.478 0.00 0.00 37.20 4.34
6216 6985 5.580998 TGATCCCTATCATGTACTACCCTC 58.419 45.833 0.00 0.00 37.20 4.30
6217 6986 4.030314 TCCCTATCATGTACTACCCTCG 57.970 50.000 0.00 0.00 0.00 4.63
6218 6987 3.396946 TCCCTATCATGTACTACCCTCGT 59.603 47.826 0.00 0.00 0.00 4.18
6219 6988 4.141088 TCCCTATCATGTACTACCCTCGTT 60.141 45.833 0.00 0.00 0.00 3.85
6224 6993 3.196901 TCATGTACTACCCTCGTTTGCAT 59.803 43.478 0.00 0.00 0.00 3.96
6242 7011 2.874701 GCATGTCAAGTCAATATCCGCT 59.125 45.455 0.00 0.00 0.00 5.52
6245 7014 5.180117 GCATGTCAAGTCAATATCCGCTTAT 59.820 40.000 0.00 0.00 0.00 1.73
6261 7030 7.156876 TCCGCTTATGAACTTGAATGAAAAT 57.843 32.000 0.00 0.00 0.00 1.82
6262 7031 7.028962 TCCGCTTATGAACTTGAATGAAAATG 58.971 34.615 0.00 0.00 0.00 2.32
6263 7032 6.254157 CCGCTTATGAACTTGAATGAAAATGG 59.746 38.462 0.00 0.00 0.00 3.16
6264 7033 7.028962 CGCTTATGAACTTGAATGAAAATGGA 58.971 34.615 0.00 0.00 0.00 3.41
6265 7034 7.703621 CGCTTATGAACTTGAATGAAAATGGAT 59.296 33.333 0.00 0.00 0.00 3.41
6317 10589 8.482429 CAAATGCAAAGTCTAAGTGTTTGATTC 58.518 33.333 0.00 0.00 33.78 2.52
6325 10597 5.405571 GTCTAAGTGTTTGATTCTGAAGCGA 59.594 40.000 0.82 0.00 0.00 4.93
6326 10598 6.091441 GTCTAAGTGTTTGATTCTGAAGCGAT 59.909 38.462 0.82 0.00 0.00 4.58
6327 10599 5.695851 AAGTGTTTGATTCTGAAGCGATT 57.304 34.783 0.82 0.00 0.00 3.34
6328 10600 5.039480 AGTGTTTGATTCTGAAGCGATTG 57.961 39.130 0.00 0.00 0.00 2.67
6329 10601 4.516698 AGTGTTTGATTCTGAAGCGATTGT 59.483 37.500 0.00 0.00 0.00 2.71
6330 10602 4.614284 GTGTTTGATTCTGAAGCGATTGTG 59.386 41.667 0.00 0.00 0.00 3.33
6331 10603 4.161333 GTTTGATTCTGAAGCGATTGTGG 58.839 43.478 0.00 0.00 0.00 4.17
6332 10604 3.333029 TGATTCTGAAGCGATTGTGGA 57.667 42.857 0.00 0.00 0.00 4.02
6333 10605 3.877559 TGATTCTGAAGCGATTGTGGAT 58.122 40.909 0.00 0.00 0.00 3.41
6334 10606 5.022282 TGATTCTGAAGCGATTGTGGATA 57.978 39.130 0.00 0.00 0.00 2.59
6335 10607 4.811024 TGATTCTGAAGCGATTGTGGATAC 59.189 41.667 0.00 0.00 0.00 2.24
6336 10608 2.809446 TCTGAAGCGATTGTGGATACG 58.191 47.619 0.00 0.00 42.51 3.06
6337 10609 2.425668 TCTGAAGCGATTGTGGATACGA 59.574 45.455 0.00 0.00 42.51 3.43
6338 10610 3.068165 TCTGAAGCGATTGTGGATACGAT 59.932 43.478 0.00 0.00 42.51 3.73
6339 10611 3.123050 TGAAGCGATTGTGGATACGATG 58.877 45.455 0.00 0.00 42.51 3.84
6340 10612 2.890808 AGCGATTGTGGATACGATGT 57.109 45.000 0.00 0.00 42.51 3.06
6341 10613 2.473816 AGCGATTGTGGATACGATGTG 58.526 47.619 0.00 0.00 42.51 3.21
6342 10614 2.159099 AGCGATTGTGGATACGATGTGT 60.159 45.455 0.00 0.00 42.51 3.72
6343 10615 2.218759 GCGATTGTGGATACGATGTGTC 59.781 50.000 0.00 0.00 42.51 3.67
6344 10616 2.794910 CGATTGTGGATACGATGTGTCC 59.205 50.000 5.85 5.85 42.87 4.02
6345 10617 2.684001 TTGTGGATACGATGTGTCCC 57.316 50.000 9.79 3.16 42.06 4.46
6346 10618 0.828022 TGTGGATACGATGTGTCCCC 59.172 55.000 9.79 0.00 42.06 4.81
6347 10619 0.828022 GTGGATACGATGTGTCCCCA 59.172 55.000 9.79 0.00 42.06 4.96
6348 10620 1.416401 GTGGATACGATGTGTCCCCAT 59.584 52.381 9.79 0.00 42.06 4.00
6349 10621 1.416030 TGGATACGATGTGTCCCCATG 59.584 52.381 9.79 0.00 42.06 3.66
6350 10622 1.512926 GATACGATGTGTCCCCATGC 58.487 55.000 0.00 0.00 0.00 4.06
6351 10623 0.836606 ATACGATGTGTCCCCATGCA 59.163 50.000 0.00 0.00 0.00 3.96
6352 10624 0.107897 TACGATGTGTCCCCATGCAC 60.108 55.000 0.00 0.00 36.26 4.57
6353 10625 2.114670 CGATGTGTCCCCATGCACC 61.115 63.158 0.00 0.00 34.94 5.01
6354 10626 2.045045 ATGTGTCCCCATGCACCG 60.045 61.111 0.00 0.00 34.94 4.94
6355 10627 2.819984 GATGTGTCCCCATGCACCGT 62.820 60.000 0.00 0.00 34.94 4.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
185 196 5.599242 TCAGATTCCCCATACGTACACAATA 59.401 40.000 0.00 0.00 0.00 1.90
209 220 5.526846 ACGAATTTTCCAACATTTGCACAAT 59.473 32.000 0.00 0.00 0.00 2.71
223 234 7.810766 TGATAAAGCATGAAACGAATTTTCC 57.189 32.000 0.00 0.00 42.80 3.13
381 412 3.067320 GCCAATTCTTATCCTCAAGGTGC 59.933 47.826 0.00 0.00 36.34 5.01
387 418 5.074929 ACCATATGGCCAATTCTTATCCTCA 59.925 40.000 22.18 0.00 39.32 3.86
469 501 5.282055 TGTCATTCTAAGCTGGTATGAGG 57.718 43.478 8.69 0.00 0.00 3.86
556 588 6.402658 GCTTGCTTGTTCCTTGATAGAAGTAC 60.403 42.308 0.00 0.00 0.00 2.73
576 608 4.301628 ACTAGAAAAACATTGCTGCTTGC 58.698 39.130 0.00 0.00 43.25 4.01
731 796 2.462889 CACGTGCTTGCAGAAAACAAT 58.537 42.857 0.82 0.00 0.00 2.71
742 807 1.599419 GGTTTTAGGTGCACGTGCTTG 60.599 52.381 37.59 3.96 42.66 4.01
748 813 2.032426 ACGAAAAGGTTTTAGGTGCACG 59.968 45.455 11.45 0.00 0.00 5.34
834 899 2.873288 GCTTGAGCCTTGCCTTCG 59.127 61.111 0.00 0.00 34.31 3.79
970 1041 1.652947 ACCCAACGAACAGGTCCTAT 58.347 50.000 0.00 0.00 0.00 2.57
1030 1101 6.383415 AGAAACAACAAAAACTGACGCTTAA 58.617 32.000 0.00 0.00 0.00 1.85
1055 1126 4.214119 CCAATCCGTATCAGCAGTATTTGG 59.786 45.833 0.00 0.00 0.00 3.28
1110 1181 6.609212 TGCTTGTTCTCAGATAGGATAGACTT 59.391 38.462 0.00 0.00 0.00 3.01
1313 1399 1.523154 GCGAAACTGCCATCAACCCA 61.523 55.000 0.00 0.00 0.00 4.51
1331 1417 7.205992 TCTGACTAATGACAGATAAGTGATGC 58.794 38.462 0.00 0.00 39.34 3.91
1442 1528 6.543465 CCTGAGAAATGCATCAAAGGTACATA 59.457 38.462 0.00 0.00 0.00 2.29
1595 1681 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
1596 1682 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
1597 1683 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
1598 1684 2.448219 GACGAGTAATTCCGAACGGAG 58.552 52.381 15.34 5.60 46.06 4.63
1599 1685 1.133025 GGACGAGTAATTCCGAACGGA 59.867 52.381 12.04 12.04 43.52 4.69
1600 1686 1.135315 TGGACGAGTAATTCCGAACGG 60.135 52.381 6.94 6.94 0.00 4.44
1601 1687 2.267188 TGGACGAGTAATTCCGAACG 57.733 50.000 0.00 0.00 0.00 3.95
1602 1688 3.841643 TCTTGGACGAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
1603 1689 4.524316 TTCTTGGACGAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
1604 1690 4.524316 TTTCTTGGACGAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
1605 1691 4.868171 TCATTTCTTGGACGAGTAATTCCG 59.132 41.667 0.00 0.00 0.00 4.30
1606 1692 6.737254 TTCATTTCTTGGACGAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
1607 1693 7.752695 ACATTCATTTCTTGGACGAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
1608 1694 7.687941 ACATTCATTTCTTGGACGAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
1609 1695 8.964476 ATACATTCATTTCTTGGACGAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
1610 1696 8.258007 AGATACATTCATTTCTTGGACGAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
1611 1697 7.782049 AGATACATTCATTTCTTGGACGAGTA 58.218 34.615 0.00 0.00 0.00 2.59
1612 1698 6.644347 AGATACATTCATTTCTTGGACGAGT 58.356 36.000 0.00 0.00 0.00 4.18
1613 1699 8.138074 TCTAGATACATTCATTTCTTGGACGAG 58.862 37.037 0.00 0.00 0.00 4.18
1614 1700 8.007405 TCTAGATACATTCATTTCTTGGACGA 57.993 34.615 0.00 0.00 0.00 4.20
1615 1701 8.706936 CATCTAGATACATTCATTTCTTGGACG 58.293 37.037 4.54 0.00 0.00 4.79
1616 1702 9.553064 ACATCTAGATACATTCATTTCTTGGAC 57.447 33.333 4.54 0.00 0.00 4.02
1648 1734 8.028938 GCCACAAAAATGAATGTATCTACAACT 58.971 33.333 0.00 0.00 39.99 3.16
1649 1735 7.812191 TGCCACAAAAATGAATGTATCTACAAC 59.188 33.333 0.00 0.00 39.99 3.32
1650 1736 7.890515 TGCCACAAAAATGAATGTATCTACAA 58.109 30.769 0.00 0.00 39.99 2.41
1651 1737 7.459795 TGCCACAAAAATGAATGTATCTACA 57.540 32.000 0.00 0.00 40.98 2.74
1652 1738 8.028938 ACTTGCCACAAAAATGAATGTATCTAC 58.971 33.333 0.00 0.00 0.00 2.59
1653 1739 8.121305 ACTTGCCACAAAAATGAATGTATCTA 57.879 30.769 0.00 0.00 0.00 1.98
1654 1740 6.996509 ACTTGCCACAAAAATGAATGTATCT 58.003 32.000 0.00 0.00 0.00 1.98
1655 1741 8.755696 TTACTTGCCACAAAAATGAATGTATC 57.244 30.769 0.00 0.00 0.00 2.24
1656 1742 9.723601 AATTACTTGCCACAAAAATGAATGTAT 57.276 25.926 0.00 0.00 0.00 2.29
1657 1743 9.202273 GAATTACTTGCCACAAAAATGAATGTA 57.798 29.630 0.00 0.00 0.00 2.29
1658 1744 7.173047 GGAATTACTTGCCACAAAAATGAATGT 59.827 33.333 0.00 0.00 0.00 2.71
1659 1745 7.520686 GGAATTACTTGCCACAAAAATGAATG 58.479 34.615 0.00 0.00 0.00 2.67
1660 1746 6.368516 CGGAATTACTTGCCACAAAAATGAAT 59.631 34.615 0.00 0.00 0.00 2.57
1661 1747 5.694006 CGGAATTACTTGCCACAAAAATGAA 59.306 36.000 0.00 0.00 0.00 2.57
1662 1748 5.010112 TCGGAATTACTTGCCACAAAAATGA 59.990 36.000 0.00 0.00 0.00 2.57
1663 1749 5.226396 TCGGAATTACTTGCCACAAAAATG 58.774 37.500 0.00 0.00 0.00 2.32
1664 1750 5.461032 TCGGAATTACTTGCCACAAAAAT 57.539 34.783 0.00 0.00 0.00 1.82
1665 1751 4.920640 TCGGAATTACTTGCCACAAAAA 57.079 36.364 0.00 0.00 0.00 1.94
1666 1752 4.612943 GTTCGGAATTACTTGCCACAAAA 58.387 39.130 0.00 0.00 0.00 2.44
1667 1753 3.304123 CGTTCGGAATTACTTGCCACAAA 60.304 43.478 0.00 0.00 0.00 2.83
1668 1754 2.224549 CGTTCGGAATTACTTGCCACAA 59.775 45.455 0.00 0.00 0.00 3.33
1669 1755 1.801771 CGTTCGGAATTACTTGCCACA 59.198 47.619 0.00 0.00 0.00 4.17
1670 1756 1.129811 CCGTTCGGAATTACTTGCCAC 59.870 52.381 5.19 0.00 0.00 5.01
1671 1757 1.002201 TCCGTTCGGAATTACTTGCCA 59.998 47.619 11.66 0.00 0.00 4.92
1672 1758 1.664151 CTCCGTTCGGAATTACTTGCC 59.336 52.381 14.79 0.00 33.41 4.52
1673 1759 1.664151 CCTCCGTTCGGAATTACTTGC 59.336 52.381 14.79 0.00 33.41 4.01
1674 1760 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1675 1761 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1676 1762 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1677 1763 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1678 1764 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1679 1765 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
1680 1766 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
1681 1767 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
1682 1768 0.251297 TTGTACTCCCTCCGTTCGGA 60.251 55.000 13.34 13.34 0.00 4.55
1683 1769 0.822164 ATTGTACTCCCTCCGTTCGG 59.178 55.000 4.74 4.74 0.00 4.30
1684 1770 2.667473 AATTGTACTCCCTCCGTTCG 57.333 50.000 0.00 0.00 0.00 3.95
1685 1771 9.939802 AATATATAAATTGTACTCCCTCCGTTC 57.060 33.333 0.00 0.00 0.00 3.95
1686 1772 9.720769 CAATATATAAATTGTACTCCCTCCGTT 57.279 33.333 0.00 0.00 33.11 4.44
1687 1773 8.877195 ACAATATATAAATTGTACTCCCTCCGT 58.123 33.333 2.59 0.00 45.84 4.69
2220 2318 3.340928 TGAGCCAATGTTGATCACTGAG 58.659 45.455 0.00 0.00 0.00 3.35
2370 2468 4.393371 GGAAATCAGTTGTTAGAGAGTGGC 59.607 45.833 0.00 0.00 0.00 5.01
2384 2482 2.783135 ACGAGCACAATGGAAATCAGT 58.217 42.857 0.00 0.00 0.00 3.41
2832 2935 5.593679 AATGGAATGAAATGCAAGGAGAG 57.406 39.130 0.00 0.00 0.00 3.20
2945 3048 3.997021 GGTATTGCGGTGGATTCTGATAG 59.003 47.826 0.00 0.00 0.00 2.08
2985 3088 8.019669 GGTGATATGATTTCCATCTGAAAATCG 58.980 37.037 8.13 0.00 45.67 3.34
3357 3656 1.953559 AGCGTTTCAGAAGCAAGTCA 58.046 45.000 0.00 0.00 0.00 3.41
3383 3682 5.041940 GCATCTGAAATTGCCAAGAGAATC 58.958 41.667 0.00 0.00 32.66 2.52
3435 3734 8.114331 AGACAAAAGCACATTGATTCAGAATA 57.886 30.769 0.00 0.00 0.00 1.75
3786 4087 3.760738 TGAAACACCATCAGGCACATAA 58.239 40.909 0.00 0.00 39.06 1.90
3793 4094 3.499918 GTGACTCTTGAAACACCATCAGG 59.500 47.826 0.00 0.00 42.21 3.86
3883 4184 3.014623 GTTACATTTGCTAGGGTCCACC 58.985 50.000 0.00 0.00 40.67 4.61
4202 4505 0.324738 TGGGAGCACAGGAGAGTAGG 60.325 60.000 0.00 0.00 0.00 3.18
4307 4619 1.868498 GTGCATGCAAAGCAAACATGT 59.132 42.857 24.58 0.00 44.64 3.21
4421 4782 8.919145 ACTCACTCCCTCTGTAAAGAAATATAG 58.081 37.037 0.00 0.00 0.00 1.31
4444 4805 1.000607 TGTGGCTACGACTGAACACTC 60.001 52.381 0.00 0.00 0.00 3.51
4778 5495 5.493809 TGTACCCAAAAGAGTAACTATGCC 58.506 41.667 0.00 0.00 0.00 4.40
4890 5607 7.174253 CCACAGTAAAGCTAAAACCATAGACAA 59.826 37.037 0.00 0.00 0.00 3.18
4935 5656 7.377766 TCTGCCAGTGAAATAAAACTCATAC 57.622 36.000 0.00 0.00 0.00 2.39
5022 5743 7.941238 ACATGGGATATCTAACTCCAATTTCAG 59.059 37.037 2.05 0.00 32.90 3.02
5157 5878 5.304614 GGTTGATATCCTAAGCAGTACTCCA 59.695 44.000 0.00 0.00 0.00 3.86
5289 6010 3.284617 TGAATCATTGCCTCCATCTGTG 58.715 45.455 0.00 0.00 0.00 3.66
5409 6132 3.334583 ACATGATAAGTTCCACTGCGT 57.665 42.857 0.00 0.00 0.00 5.24
5413 6136 6.403866 TTTGCAAACATGATAAGTTCCACT 57.596 33.333 8.05 0.00 0.00 4.00
5477 6203 8.358148 CAGCCAAAATAGCATCTAGATTTTGAT 58.642 33.333 21.78 8.47 46.40 2.57
5510 6236 9.715123 CATATGAAGCGACTGATAGTATCTAAG 57.285 37.037 11.40 4.12 0.00 2.18
5639 6369 0.532573 TGCCAGCTAGAAGAACCTCG 59.467 55.000 0.00 0.00 0.00 4.63
5642 6372 2.716217 ACAATGCCAGCTAGAAGAACC 58.284 47.619 0.00 0.00 0.00 3.62
5658 6388 3.969117 ATATTCATGTCGCGCAACAAT 57.031 38.095 4.74 0.00 31.81 2.71
5659 6389 6.720012 ATATATATTCATGTCGCGCAACAA 57.280 33.333 4.74 0.00 31.81 2.83
5689 6419 6.039047 CACAGGCACAGCTCAGAATATAAATT 59.961 38.462 0.00 0.00 0.00 1.82
5719 6449 2.483188 CGGAGACCAAGGCCAACTATAC 60.483 54.545 5.01 0.00 0.00 1.47
5721 6451 0.541863 CGGAGACCAAGGCCAACTAT 59.458 55.000 5.01 0.00 0.00 2.12
5726 6456 3.691342 CGACGGAGACCAAGGCCA 61.691 66.667 5.01 0.00 0.00 5.36
5733 6463 1.706443 ATTTTCGTTCGACGGAGACC 58.294 50.000 0.00 0.00 42.81 3.85
5794 6563 2.440247 CCCGGGATGAACAAGCCC 60.440 66.667 18.48 0.00 38.53 5.19
5803 6572 2.218603 CGGATACTTTTTCCCGGGATG 58.781 52.381 27.48 17.08 38.42 3.51
5804 6573 2.632987 CGGATACTTTTTCCCGGGAT 57.367 50.000 27.48 12.05 38.42 3.85
5808 6577 0.730840 GCACCGGATACTTTTTCCCG 59.269 55.000 9.46 0.00 41.47 5.14
5809 6578 2.014857 GAGCACCGGATACTTTTTCCC 58.985 52.381 9.46 0.00 0.00 3.97
5810 6579 2.014857 GGAGCACCGGATACTTTTTCC 58.985 52.381 9.46 0.00 0.00 3.13
5811 6580 2.014857 GGGAGCACCGGATACTTTTTC 58.985 52.381 9.46 0.00 36.97 2.29
5812 6581 1.353022 TGGGAGCACCGGATACTTTTT 59.647 47.619 9.46 0.00 44.64 1.94
5813 6582 0.988832 TGGGAGCACCGGATACTTTT 59.011 50.000 9.46 0.00 44.64 2.27
5814 6583 2.691663 TGGGAGCACCGGATACTTT 58.308 52.632 9.46 0.00 44.64 2.66
5815 6584 4.472701 TGGGAGCACCGGATACTT 57.527 55.556 9.46 0.00 44.64 2.24
5822 6591 2.187946 CTAAGGCTGGGAGCACCG 59.812 66.667 0.00 0.00 44.75 4.94
5823 6592 1.348775 ATCCTAAGGCTGGGAGCACC 61.349 60.000 13.59 0.00 44.75 5.01
5824 6593 1.424638 TATCCTAAGGCTGGGAGCAC 58.575 55.000 13.59 0.00 44.75 4.40
5825 6594 2.422939 ATATCCTAAGGCTGGGAGCA 57.577 50.000 13.59 6.13 44.75 4.26
5826 6595 2.026729 GGAATATCCTAAGGCTGGGAGC 60.027 54.545 13.59 0.00 35.32 4.70
5827 6596 3.990959 GGAATATCCTAAGGCTGGGAG 57.009 52.381 13.59 0.82 35.32 4.30
5899 6668 8.707449 ACATTCATTATAGCATCCACCATTTTT 58.293 29.630 0.00 0.00 0.00 1.94
5900 6669 8.145767 CACATTCATTATAGCATCCACCATTTT 58.854 33.333 0.00 0.00 0.00 1.82
5901 6670 7.506599 TCACATTCATTATAGCATCCACCATTT 59.493 33.333 0.00 0.00 0.00 2.32
5902 6671 7.005902 TCACATTCATTATAGCATCCACCATT 58.994 34.615 0.00 0.00 0.00 3.16
5903 6672 6.432162 GTCACATTCATTATAGCATCCACCAT 59.568 38.462 0.00 0.00 0.00 3.55
5904 6673 5.764686 GTCACATTCATTATAGCATCCACCA 59.235 40.000 0.00 0.00 0.00 4.17
5905 6674 6.000219 AGTCACATTCATTATAGCATCCACC 59.000 40.000 0.00 0.00 0.00 4.61
5906 6675 7.657354 TGTAGTCACATTCATTATAGCATCCAC 59.343 37.037 0.00 0.00 0.00 4.02
5907 6676 7.734942 TGTAGTCACATTCATTATAGCATCCA 58.265 34.615 0.00 0.00 0.00 3.41
5908 6677 8.607441 TTGTAGTCACATTCATTATAGCATCC 57.393 34.615 0.00 0.00 33.76 3.51
5909 6678 9.869844 GTTTGTAGTCACATTCATTATAGCATC 57.130 33.333 0.00 0.00 33.76 3.91
5910 6679 9.394767 TGTTTGTAGTCACATTCATTATAGCAT 57.605 29.630 0.00 0.00 33.76 3.79
5911 6680 8.785329 TGTTTGTAGTCACATTCATTATAGCA 57.215 30.769 0.00 0.00 33.76 3.49
5917 6686 9.598517 ACATTTTTGTTTGTAGTCACATTCATT 57.401 25.926 0.00 0.00 33.76 2.57
5918 6687 9.033481 CACATTTTTGTTTGTAGTCACATTCAT 57.967 29.630 0.00 0.00 33.76 2.57
5919 6688 8.031864 ACACATTTTTGTTTGTAGTCACATTCA 58.968 29.630 0.00 0.00 33.76 2.57
5920 6689 8.406172 ACACATTTTTGTTTGTAGTCACATTC 57.594 30.769 0.00 0.00 33.76 2.67
5921 6690 9.862371 TTACACATTTTTGTTTGTAGTCACATT 57.138 25.926 0.00 0.00 33.76 2.71
5923 6692 9.509855 GATTACACATTTTTGTTTGTAGTCACA 57.490 29.630 0.00 0.00 33.59 3.58
5924 6693 9.730420 AGATTACACATTTTTGTTTGTAGTCAC 57.270 29.630 0.00 0.00 35.01 3.67
5927 6696 9.893305 GCTAGATTACACATTTTTGTTTGTAGT 57.107 29.630 0.00 0.00 0.00 2.73
5928 6697 9.891828 TGCTAGATTACACATTTTTGTTTGTAG 57.108 29.630 0.00 0.00 0.00 2.74
5930 6699 9.195411 CATGCTAGATTACACATTTTTGTTTGT 57.805 29.630 0.00 0.00 0.00 2.83
5931 6700 9.409312 TCATGCTAGATTACACATTTTTGTTTG 57.591 29.630 0.00 0.00 0.00 2.93
5932 6701 9.979578 TTCATGCTAGATTACACATTTTTGTTT 57.020 25.926 0.00 0.00 0.00 2.83
5938 6707 9.618890 ACACTATTCATGCTAGATTACACATTT 57.381 29.630 0.00 0.00 0.00 2.32
5950 6719 9.719355 TGTCTTTTCTTTACACTATTCATGCTA 57.281 29.630 0.00 0.00 0.00 3.49
5951 6720 8.621532 TGTCTTTTCTTTACACTATTCATGCT 57.378 30.769 0.00 0.00 0.00 3.79
5952 6721 9.677567 TTTGTCTTTTCTTTACACTATTCATGC 57.322 29.630 0.00 0.00 0.00 4.06
5955 6724 9.730420 GCTTTTGTCTTTTCTTTACACTATTCA 57.270 29.630 0.00 0.00 0.00 2.57
5956 6725 9.730420 TGCTTTTGTCTTTTCTTTACACTATTC 57.270 29.630 0.00 0.00 0.00 1.75
5958 6727 9.516314 GTTGCTTTTGTCTTTTCTTTACACTAT 57.484 29.630 0.00 0.00 0.00 2.12
5959 6728 8.516234 TGTTGCTTTTGTCTTTTCTTTACACTA 58.484 29.630 0.00 0.00 0.00 2.74
5960 6729 7.375053 TGTTGCTTTTGTCTTTTCTTTACACT 58.625 30.769 0.00 0.00 0.00 3.55
5961 6730 7.575332 TGTTGCTTTTGTCTTTTCTTTACAC 57.425 32.000 0.00 0.00 0.00 2.90
5962 6731 8.655092 CAATGTTGCTTTTGTCTTTTCTTTACA 58.345 29.630 0.00 0.00 0.00 2.41
5963 6732 8.868916 TCAATGTTGCTTTTGTCTTTTCTTTAC 58.131 29.630 0.00 0.00 0.00 2.01
5964 6733 8.868916 GTCAATGTTGCTTTTGTCTTTTCTTTA 58.131 29.630 0.00 0.00 0.00 1.85
5965 6734 7.387397 TGTCAATGTTGCTTTTGTCTTTTCTTT 59.613 29.630 0.00 0.00 0.00 2.52
5966 6735 6.873076 TGTCAATGTTGCTTTTGTCTTTTCTT 59.127 30.769 0.00 0.00 0.00 2.52
5967 6736 6.311200 GTGTCAATGTTGCTTTTGTCTTTTCT 59.689 34.615 0.00 0.00 0.00 2.52
5968 6737 6.311200 AGTGTCAATGTTGCTTTTGTCTTTTC 59.689 34.615 0.00 0.00 0.00 2.29
5969 6738 6.165577 AGTGTCAATGTTGCTTTTGTCTTTT 58.834 32.000 0.00 0.00 0.00 2.27
5970 6739 5.723295 AGTGTCAATGTTGCTTTTGTCTTT 58.277 33.333 0.00 0.00 0.00 2.52
5971 6740 5.329035 AGTGTCAATGTTGCTTTTGTCTT 57.671 34.783 0.00 0.00 0.00 3.01
5972 6741 4.989279 AGTGTCAATGTTGCTTTTGTCT 57.011 36.364 0.00 0.00 0.00 3.41
5973 6742 6.917477 TCAATAGTGTCAATGTTGCTTTTGTC 59.083 34.615 5.03 0.00 0.00 3.18
5974 6743 6.804677 TCAATAGTGTCAATGTTGCTTTTGT 58.195 32.000 5.03 0.00 0.00 2.83
5975 6744 7.140705 TCTCAATAGTGTCAATGTTGCTTTTG 58.859 34.615 5.03 0.00 0.00 2.44
5976 6745 7.275888 TCTCAATAGTGTCAATGTTGCTTTT 57.724 32.000 5.03 0.00 0.00 2.27
5977 6746 6.882610 TCTCAATAGTGTCAATGTTGCTTT 57.117 33.333 5.03 0.00 0.00 3.51
5978 6747 6.883217 AGATCTCAATAGTGTCAATGTTGCTT 59.117 34.615 5.03 0.00 0.00 3.91
5979 6748 6.315642 CAGATCTCAATAGTGTCAATGTTGCT 59.684 38.462 5.03 0.00 0.00 3.91
5980 6749 6.457934 CCAGATCTCAATAGTGTCAATGTTGC 60.458 42.308 5.03 0.00 0.00 4.17
5981 6750 6.820152 TCCAGATCTCAATAGTGTCAATGTTG 59.180 38.462 3.63 3.63 0.00 3.33
5982 6751 6.820656 GTCCAGATCTCAATAGTGTCAATGTT 59.179 38.462 0.00 0.00 0.00 2.71
5983 6752 6.155910 AGTCCAGATCTCAATAGTGTCAATGT 59.844 38.462 0.00 0.00 0.00 2.71
5984 6753 6.580788 AGTCCAGATCTCAATAGTGTCAATG 58.419 40.000 0.00 0.00 0.00 2.82
5985 6754 6.805016 AGTCCAGATCTCAATAGTGTCAAT 57.195 37.500 0.00 0.00 0.00 2.57
5986 6755 6.892456 AGTAGTCCAGATCTCAATAGTGTCAA 59.108 38.462 0.00 0.00 0.00 3.18
5987 6756 6.427441 AGTAGTCCAGATCTCAATAGTGTCA 58.573 40.000 0.00 0.00 0.00 3.58
5988 6757 6.770785 AGAGTAGTCCAGATCTCAATAGTGTC 59.229 42.308 0.00 0.00 0.00 3.67
5989 6758 6.668645 AGAGTAGTCCAGATCTCAATAGTGT 58.331 40.000 0.00 0.00 0.00 3.55
5990 6759 7.581213 AAGAGTAGTCCAGATCTCAATAGTG 57.419 40.000 0.00 0.00 0.00 2.74
5991 6760 8.602472 AAAAGAGTAGTCCAGATCTCAATAGT 57.398 34.615 0.00 0.00 0.00 2.12
6021 6790 9.834628 GTCCAAAATCGAAATGTACATTAAGAA 57.165 29.630 21.07 8.17 0.00 2.52
6022 6791 8.455682 GGTCCAAAATCGAAATGTACATTAAGA 58.544 33.333 21.07 20.96 0.00 2.10
6023 6792 8.458843 AGGTCCAAAATCGAAATGTACATTAAG 58.541 33.333 21.07 16.90 0.00 1.85
6024 6793 8.240682 CAGGTCCAAAATCGAAATGTACATTAA 58.759 33.333 21.07 10.51 0.00 1.40
6025 6794 7.608376 TCAGGTCCAAAATCGAAATGTACATTA 59.392 33.333 21.07 6.76 0.00 1.90
6026 6795 6.432783 TCAGGTCCAAAATCGAAATGTACATT 59.567 34.615 15.47 15.47 0.00 2.71
6027 6796 5.943416 TCAGGTCCAAAATCGAAATGTACAT 59.057 36.000 1.41 1.41 0.00 2.29
6028 6797 5.309638 TCAGGTCCAAAATCGAAATGTACA 58.690 37.500 0.00 0.00 0.00 2.90
6029 6798 5.873179 TCAGGTCCAAAATCGAAATGTAC 57.127 39.130 0.00 0.00 0.00 2.90
6030 6799 6.885952 TTTCAGGTCCAAAATCGAAATGTA 57.114 33.333 0.00 0.00 0.00 2.29
6031 6800 5.782893 TTTCAGGTCCAAAATCGAAATGT 57.217 34.783 0.00 0.00 0.00 2.71
6032 6801 7.656707 AAATTTCAGGTCCAAAATCGAAATG 57.343 32.000 0.00 0.00 34.31 2.32
6033 6802 8.675705 AAAAATTTCAGGTCCAAAATCGAAAT 57.324 26.923 0.00 0.00 35.25 2.17
6034 6803 9.255304 CTAAAAATTTCAGGTCCAAAATCGAAA 57.745 29.630 0.00 0.00 0.00 3.46
6035 6804 7.870445 CCTAAAAATTTCAGGTCCAAAATCGAA 59.130 33.333 9.62 0.00 0.00 3.71
6036 6805 7.375053 CCTAAAAATTTCAGGTCCAAAATCGA 58.625 34.615 9.62 0.00 0.00 3.59
6037 6806 6.589907 CCCTAAAAATTTCAGGTCCAAAATCG 59.410 38.462 14.55 0.00 0.00 3.34
6038 6807 6.878923 CCCCTAAAAATTTCAGGTCCAAAATC 59.121 38.462 14.55 0.00 0.00 2.17
6039 6808 6.560687 TCCCCTAAAAATTTCAGGTCCAAAAT 59.439 34.615 14.55 0.00 0.00 1.82
6040 6809 5.905913 TCCCCTAAAAATTTCAGGTCCAAAA 59.094 36.000 14.55 0.00 0.00 2.44
6041 6810 5.468658 TCCCCTAAAAATTTCAGGTCCAAA 58.531 37.500 14.55 0.00 0.00 3.28
6042 6811 5.081315 TCCCCTAAAAATTTCAGGTCCAA 57.919 39.130 14.55 0.00 0.00 3.53
6043 6812 4.750833 TCCCCTAAAAATTTCAGGTCCA 57.249 40.909 14.55 0.30 0.00 4.02
6044 6813 8.225416 ACTATATCCCCTAAAAATTTCAGGTCC 58.775 37.037 14.55 0.00 0.00 4.46
6045 6814 9.067986 CACTATATCCCCTAAAAATTTCAGGTC 57.932 37.037 14.55 0.00 0.00 3.85
6046 6815 8.787818 TCACTATATCCCCTAAAAATTTCAGGT 58.212 33.333 14.55 3.21 0.00 4.00
6047 6816 9.067986 GTCACTATATCCCCTAAAAATTTCAGG 57.932 37.037 10.53 10.53 0.00 3.86
6048 6817 9.627123 TGTCACTATATCCCCTAAAAATTTCAG 57.373 33.333 0.00 0.00 0.00 3.02
6051 6820 9.588096 GGATGTCACTATATCCCCTAAAAATTT 57.412 33.333 0.00 0.00 37.41 1.82
6062 6831 7.506114 TGTTTACAAGGGATGTCACTATATCC 58.494 38.462 0.00 0.00 42.70 2.59
6063 6832 9.561069 AATGTTTACAAGGGATGTCACTATATC 57.439 33.333 0.00 0.00 42.70 1.63
6064 6833 9.561069 GAATGTTTACAAGGGATGTCACTATAT 57.439 33.333 0.00 0.00 42.70 0.86
6065 6834 8.768397 AGAATGTTTACAAGGGATGTCACTATA 58.232 33.333 0.00 0.00 42.70 1.31
6066 6835 7.633789 AGAATGTTTACAAGGGATGTCACTAT 58.366 34.615 0.00 0.00 42.70 2.12
6067 6836 7.016153 AGAATGTTTACAAGGGATGTCACTA 57.984 36.000 0.00 0.00 42.70 2.74
6068 6837 5.880901 AGAATGTTTACAAGGGATGTCACT 58.119 37.500 0.00 0.00 42.70 3.41
6069 6838 5.705441 TGAGAATGTTTACAAGGGATGTCAC 59.295 40.000 0.00 0.00 42.70 3.67
6070 6839 5.875224 TGAGAATGTTTACAAGGGATGTCA 58.125 37.500 0.00 0.00 42.70 3.58
6071 6840 7.396540 AATGAGAATGTTTACAAGGGATGTC 57.603 36.000 0.00 0.00 42.70 3.06
6072 6841 7.781324 AAATGAGAATGTTTACAAGGGATGT 57.219 32.000 0.00 0.00 46.36 3.06
6132 6901 2.364970 CCCAGTGCTCCAATGTCAAAAA 59.635 45.455 0.00 0.00 0.00 1.94
6133 6902 1.962807 CCCAGTGCTCCAATGTCAAAA 59.037 47.619 0.00 0.00 0.00 2.44
6134 6903 1.144708 TCCCAGTGCTCCAATGTCAAA 59.855 47.619 0.00 0.00 0.00 2.69
6135 6904 0.770499 TCCCAGTGCTCCAATGTCAA 59.230 50.000 0.00 0.00 0.00 3.18
6136 6905 0.325933 CTCCCAGTGCTCCAATGTCA 59.674 55.000 0.00 0.00 0.00 3.58
6137 6906 0.326264 ACTCCCAGTGCTCCAATGTC 59.674 55.000 0.00 0.00 0.00 3.06
6138 6907 1.279271 GTACTCCCAGTGCTCCAATGT 59.721 52.381 0.00 0.00 0.00 2.71
6139 6908 1.407437 GGTACTCCCAGTGCTCCAATG 60.407 57.143 0.00 0.00 31.18 2.82
6140 6909 0.912486 GGTACTCCCAGTGCTCCAAT 59.088 55.000 0.00 0.00 31.18 3.16
6141 6910 0.178903 AGGTACTCCCAGTGCTCCAA 60.179 55.000 0.00 0.00 34.66 3.53
6142 6911 1.469708 AGGTACTCCCAGTGCTCCA 59.530 57.895 0.00 0.00 34.66 3.86
6143 6912 4.463043 AGGTACTCCCAGTGCTCC 57.537 61.111 0.00 0.00 34.66 4.70
6155 6924 3.983044 ATGTTCCCAGTCTTGAGGTAC 57.017 47.619 0.00 0.00 0.00 3.34
6156 6925 3.009033 CCAATGTTCCCAGTCTTGAGGTA 59.991 47.826 0.00 0.00 0.00 3.08
6157 6926 2.224867 CCAATGTTCCCAGTCTTGAGGT 60.225 50.000 0.00 0.00 0.00 3.85
6158 6927 2.040278 TCCAATGTTCCCAGTCTTGAGG 59.960 50.000 0.00 0.00 0.00 3.86
6159 6928 3.423539 TCCAATGTTCCCAGTCTTGAG 57.576 47.619 0.00 0.00 0.00 3.02
6160 6929 4.536090 AGTATCCAATGTTCCCAGTCTTGA 59.464 41.667 0.00 0.00 0.00 3.02
6161 6930 4.848357 AGTATCCAATGTTCCCAGTCTTG 58.152 43.478 0.00 0.00 0.00 3.02
6162 6931 5.520748 AAGTATCCAATGTTCCCAGTCTT 57.479 39.130 0.00 0.00 0.00 3.01
6163 6932 5.014123 TGAAAGTATCCAATGTTCCCAGTCT 59.986 40.000 0.00 0.00 0.00 3.24
6164 6933 5.123979 GTGAAAGTATCCAATGTTCCCAGTC 59.876 44.000 0.00 0.00 0.00 3.51
6165 6934 5.010282 GTGAAAGTATCCAATGTTCCCAGT 58.990 41.667 0.00 0.00 0.00 4.00
6166 6935 5.009631 TGTGAAAGTATCCAATGTTCCCAG 58.990 41.667 0.00 0.00 0.00 4.45
6167 6936 4.991776 TGTGAAAGTATCCAATGTTCCCA 58.008 39.130 0.00 0.00 0.00 4.37
6168 6937 5.418840 ACATGTGAAAGTATCCAATGTTCCC 59.581 40.000 0.00 0.00 32.20 3.97
6169 6938 6.515272 ACATGTGAAAGTATCCAATGTTCC 57.485 37.500 0.00 0.00 32.20 3.62
6170 6939 7.592938 TCAACATGTGAAAGTATCCAATGTTC 58.407 34.615 0.00 0.00 39.32 3.18
6171 6940 7.523293 TCAACATGTGAAAGTATCCAATGTT 57.477 32.000 0.00 0.00 40.74 2.71
6172 6941 7.148018 GGATCAACATGTGAAAGTATCCAATGT 60.148 37.037 0.00 0.00 40.50 2.71
6173 6942 7.198390 GGATCAACATGTGAAAGTATCCAATG 58.802 38.462 0.00 0.00 40.50 2.82
6174 6943 6.322201 GGGATCAACATGTGAAAGTATCCAAT 59.678 38.462 0.00 0.00 40.50 3.16
6175 6944 5.652014 GGGATCAACATGTGAAAGTATCCAA 59.348 40.000 0.00 0.00 40.50 3.53
6176 6945 5.044919 AGGGATCAACATGTGAAAGTATCCA 60.045 40.000 0.00 0.00 40.50 3.41
6177 6946 5.440610 AGGGATCAACATGTGAAAGTATCC 58.559 41.667 0.00 6.03 40.50 2.59
6178 6947 7.933577 TGATAGGGATCAACATGTGAAAGTATC 59.066 37.037 0.00 2.03 39.20 2.24
6179 6948 7.805163 TGATAGGGATCAACATGTGAAAGTAT 58.195 34.615 0.00 0.00 39.20 2.12
6180 6949 7.194112 TGATAGGGATCAACATGTGAAAGTA 57.806 36.000 0.00 0.00 39.20 2.24
6181 6950 6.065976 TGATAGGGATCAACATGTGAAAGT 57.934 37.500 0.00 0.00 39.20 2.66
6182 6951 6.544931 ACATGATAGGGATCAACATGTGAAAG 59.455 38.462 0.00 0.00 45.23 2.62
6183 6952 6.425735 ACATGATAGGGATCAACATGTGAAA 58.574 36.000 0.00 0.00 45.23 2.69
6184 6953 6.005066 ACATGATAGGGATCAACATGTGAA 57.995 37.500 0.00 0.00 45.23 3.18
6185 6954 5.635278 ACATGATAGGGATCAACATGTGA 57.365 39.130 0.00 0.00 45.23 3.58
6186 6955 6.528321 AGTACATGATAGGGATCAACATGTG 58.472 40.000 21.12 0.00 46.69 3.21
6187 6956 6.753913 AGTACATGATAGGGATCAACATGT 57.246 37.500 18.53 18.53 45.23 3.21
6188 6957 7.099764 GGTAGTACATGATAGGGATCAACATG 58.900 42.308 0.00 0.00 45.23 3.21
6189 6958 6.213600 GGGTAGTACATGATAGGGATCAACAT 59.786 42.308 0.00 0.00 45.23 2.71
6190 6959 5.542635 GGGTAGTACATGATAGGGATCAACA 59.457 44.000 0.00 0.00 45.23 3.33
6191 6960 5.780793 AGGGTAGTACATGATAGGGATCAAC 59.219 44.000 0.00 0.00 45.23 3.18
6192 6961 5.977533 AGGGTAGTACATGATAGGGATCAA 58.022 41.667 0.00 0.00 45.23 2.57
6193 6962 5.580998 GAGGGTAGTACATGATAGGGATCA 58.419 45.833 0.00 0.00 46.13 2.92
6194 6963 4.641094 CGAGGGTAGTACATGATAGGGATC 59.359 50.000 0.00 0.00 0.00 3.36
6195 6964 4.044317 ACGAGGGTAGTACATGATAGGGAT 59.956 45.833 0.00 0.00 0.00 3.85
6196 6965 3.396946 ACGAGGGTAGTACATGATAGGGA 59.603 47.826 0.00 0.00 0.00 4.20
6197 6966 3.764218 ACGAGGGTAGTACATGATAGGG 58.236 50.000 0.00 0.00 0.00 3.53
6198 6967 5.529791 CAAACGAGGGTAGTACATGATAGG 58.470 45.833 0.00 0.00 0.00 2.57
6199 6968 4.982916 GCAAACGAGGGTAGTACATGATAG 59.017 45.833 0.00 0.00 0.00 2.08
6200 6969 4.403113 TGCAAACGAGGGTAGTACATGATA 59.597 41.667 0.00 0.00 0.00 2.15
6201 6970 3.196901 TGCAAACGAGGGTAGTACATGAT 59.803 43.478 0.00 0.00 0.00 2.45
6202 6971 2.563620 TGCAAACGAGGGTAGTACATGA 59.436 45.455 0.00 0.00 0.00 3.07
6203 6972 2.967362 TGCAAACGAGGGTAGTACATG 58.033 47.619 2.06 0.00 0.00 3.21
6204 6973 3.055385 ACATGCAAACGAGGGTAGTACAT 60.055 43.478 2.06 0.00 0.00 2.29
6205 6974 2.300723 ACATGCAAACGAGGGTAGTACA 59.699 45.455 2.06 0.00 0.00 2.90
6206 6975 2.928116 GACATGCAAACGAGGGTAGTAC 59.072 50.000 0.00 0.00 0.00 2.73
6207 6976 2.563620 TGACATGCAAACGAGGGTAGTA 59.436 45.455 0.00 0.00 0.00 1.82
6208 6977 1.346395 TGACATGCAAACGAGGGTAGT 59.654 47.619 0.00 0.00 0.00 2.73
6209 6978 2.093306 TGACATGCAAACGAGGGTAG 57.907 50.000 0.00 0.00 0.00 3.18
6210 6979 2.224426 ACTTGACATGCAAACGAGGGTA 60.224 45.455 0.00 0.00 35.74 3.69
6211 6980 1.238439 CTTGACATGCAAACGAGGGT 58.762 50.000 0.00 0.00 35.74 4.34
6212 6981 1.197721 GACTTGACATGCAAACGAGGG 59.802 52.381 0.00 0.00 35.74 4.30
6213 6982 1.872952 TGACTTGACATGCAAACGAGG 59.127 47.619 0.00 0.00 35.74 4.63
6214 6983 3.607422 TTGACTTGACATGCAAACGAG 57.393 42.857 0.00 0.00 35.74 4.18
6215 6984 5.163764 GGATATTGACTTGACATGCAAACGA 60.164 40.000 0.00 0.00 35.74 3.85
6216 6985 5.030295 GGATATTGACTTGACATGCAAACG 58.970 41.667 0.00 0.00 35.74 3.60
6217 6986 5.030295 CGGATATTGACTTGACATGCAAAC 58.970 41.667 0.00 0.00 35.74 2.93
6218 6987 4.438608 GCGGATATTGACTTGACATGCAAA 60.439 41.667 0.00 0.00 35.74 3.68
6219 6988 3.065233 GCGGATATTGACTTGACATGCAA 59.935 43.478 0.00 0.00 34.73 4.08
6224 6993 5.912892 TCATAAGCGGATATTGACTTGACA 58.087 37.500 0.00 0.00 0.00 3.58
6242 7011 9.642327 CACATCCATTTTCATTCAAGTTCATAA 57.358 29.630 0.00 0.00 0.00 1.90
6245 7014 7.053316 ACACATCCATTTTCATTCAAGTTCA 57.947 32.000 0.00 0.00 0.00 3.18
6295 10567 6.542005 TCAGAATCAAACACTTAGACTTTGCA 59.458 34.615 0.00 0.00 0.00 4.08
6296 10568 6.959361 TCAGAATCAAACACTTAGACTTTGC 58.041 36.000 0.00 0.00 0.00 3.68
6306 10578 4.516698 ACAATCGCTTCAGAATCAAACACT 59.483 37.500 0.00 0.00 0.00 3.55
6317 10589 2.809446 TCGTATCCACAATCGCTTCAG 58.191 47.619 0.00 0.00 0.00 3.02
6325 10597 2.158813 GGGGACACATCGTATCCACAAT 60.159 50.000 0.00 0.00 35.84 2.71
6326 10598 1.208535 GGGGACACATCGTATCCACAA 59.791 52.381 0.00 0.00 35.84 3.33
6327 10599 0.828022 GGGGACACATCGTATCCACA 59.172 55.000 0.00 0.00 35.84 4.17
6328 10600 0.828022 TGGGGACACATCGTATCCAC 59.172 55.000 0.00 0.00 36.37 4.02
6329 10601 3.308626 TGGGGACACATCGTATCCA 57.691 52.632 0.00 0.00 33.87 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.