Multiple sequence alignment - TraesCS1B01G270200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G270200 chr1B 100.000 3313 0 0 1 3313 474759172 474762484 0 6119
1 TraesCS1B01G270200 chr1B 96.774 806 25 1 1 806 474113842 474114646 0 1343
2 TraesCS1B01G270200 chr1B 94.643 448 24 0 2866 3313 474820539 474820986 0 695
3 TraesCS1B01G270200 chr1B 94.643 448 23 1 2866 3313 195856580 195856134 0 693
4 TraesCS1B01G270200 chr1D 95.007 1442 70 2 806 2245 352545999 352544558 0 2263
5 TraesCS1B01G270200 chr1A 90.667 1425 119 7 806 2229 453093432 453092021 0 1882
6 TraesCS1B01G270200 chr1A 95.031 805 35 3 1 803 532809313 532810114 0 1260
7 TraesCS1B01G270200 chr5B 96.617 798 27 0 1 798 13732686 13731889 0 1325
8 TraesCS1B01G270200 chr5B 95.100 449 22 0 2865 3313 376311968 376312416 0 708
9 TraesCS1B01G270200 chr3B 96.115 798 31 0 1 798 669745716 669746513 0 1303
10 TraesCS1B01G270200 chr3B 94.843 446 23 0 2866 3311 245646036 245646481 0 697
11 TraesCS1B01G270200 chr3B 94.260 453 23 2 2861 3313 283199447 283198998 0 689
12 TraesCS1B01G270200 chr2B 95.771 804 32 2 1 804 725567930 725568731 0 1295
13 TraesCS1B01G270200 chr2B 94.568 810 37 7 1 808 247622909 247622105 0 1245
14 TraesCS1B01G270200 chr2B 82.807 1076 144 31 2262 3313 577467322 577468380 0 924
15 TraesCS1B01G270200 chr2B 93.031 617 43 0 2246 2862 354065415 354064799 0 902
16 TraesCS1B01G270200 chr4B 95.409 806 35 2 1 806 522292777 522293580 0 1282
17 TraesCS1B01G270200 chr4B 94.667 450 23 1 2864 3313 352955257 352955705 0 697
18 TraesCS1B01G270200 chr7A 95.625 800 31 3 1 798 546590812 546591609 0 1280
19 TraesCS1B01G270200 chr7A 95.167 807 37 2 1 806 674010482 674009677 0 1273
20 TraesCS1B01G270200 chr7A 82.857 1085 141 34 2246 3313 148666272 148667328 0 931
21 TraesCS1B01G270200 chr2D 93.851 618 38 0 2246 2863 616110512 616111129 0 931
22 TraesCS1B01G270200 chr2D 93.204 618 39 3 2244 2860 616077712 616078327 0 905
23 TraesCS1B01G270200 chr7B 92.892 619 39 4 2246 2861 385388550 385387934 0 894
24 TraesCS1B01G270200 chr6B 92.846 615 42 2 2246 2860 252755788 252756400 0 891
25 TraesCS1B01G270200 chr6B 94.619 446 23 1 2868 3313 633157919 633157475 0 689
26 TraesCS1B01G270200 chrUn 92.683 615 43 2 2246 2860 78330256 78329644 0 885
27 TraesCS1B01G270200 chr5D 92.569 619 43 2 2246 2861 529794471 529793853 0 885
28 TraesCS1B01G270200 chr5D 92.063 630 45 4 2246 2871 529787637 529787009 0 881


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G270200 chr1B 474759172 474762484 3312 False 6119 6119 100.000 1 3313 1 chr1B.!!$F2 3312
1 TraesCS1B01G270200 chr1B 474113842 474114646 804 False 1343 1343 96.774 1 806 1 chr1B.!!$F1 805
2 TraesCS1B01G270200 chr1D 352544558 352545999 1441 True 2263 2263 95.007 806 2245 1 chr1D.!!$R1 1439
3 TraesCS1B01G270200 chr1A 453092021 453093432 1411 True 1882 1882 90.667 806 2229 1 chr1A.!!$R1 1423
4 TraesCS1B01G270200 chr1A 532809313 532810114 801 False 1260 1260 95.031 1 803 1 chr1A.!!$F1 802
5 TraesCS1B01G270200 chr5B 13731889 13732686 797 True 1325 1325 96.617 1 798 1 chr5B.!!$R1 797
6 TraesCS1B01G270200 chr3B 669745716 669746513 797 False 1303 1303 96.115 1 798 1 chr3B.!!$F2 797
7 TraesCS1B01G270200 chr2B 725567930 725568731 801 False 1295 1295 95.771 1 804 1 chr2B.!!$F2 803
8 TraesCS1B01G270200 chr2B 247622105 247622909 804 True 1245 1245 94.568 1 808 1 chr2B.!!$R1 807
9 TraesCS1B01G270200 chr2B 577467322 577468380 1058 False 924 924 82.807 2262 3313 1 chr2B.!!$F1 1051
10 TraesCS1B01G270200 chr2B 354064799 354065415 616 True 902 902 93.031 2246 2862 1 chr2B.!!$R2 616
11 TraesCS1B01G270200 chr4B 522292777 522293580 803 False 1282 1282 95.409 1 806 1 chr4B.!!$F2 805
12 TraesCS1B01G270200 chr7A 546590812 546591609 797 False 1280 1280 95.625 1 798 1 chr7A.!!$F2 797
13 TraesCS1B01G270200 chr7A 674009677 674010482 805 True 1273 1273 95.167 1 806 1 chr7A.!!$R1 805
14 TraesCS1B01G270200 chr7A 148666272 148667328 1056 False 931 931 82.857 2246 3313 1 chr7A.!!$F1 1067
15 TraesCS1B01G270200 chr2D 616110512 616111129 617 False 931 931 93.851 2246 2863 1 chr2D.!!$F2 617
16 TraesCS1B01G270200 chr2D 616077712 616078327 615 False 905 905 93.204 2244 2860 1 chr2D.!!$F1 616
17 TraesCS1B01G270200 chr7B 385387934 385388550 616 True 894 894 92.892 2246 2861 1 chr7B.!!$R1 615
18 TraesCS1B01G270200 chr6B 252755788 252756400 612 False 891 891 92.846 2246 2860 1 chr6B.!!$F1 614
19 TraesCS1B01G270200 chrUn 78329644 78330256 612 True 885 885 92.683 2246 2860 1 chrUn.!!$R1 614
20 TraesCS1B01G270200 chr5D 529793853 529794471 618 True 885 885 92.569 2246 2861 1 chr5D.!!$R2 615
21 TraesCS1B01G270200 chr5D 529787009 529787637 628 True 881 881 92.063 2246 2871 1 chr5D.!!$R1 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
512 513 2.159421 CGTATGTGGTCGCTACTCACTT 60.159 50.0 10.01 7.26 31.73 3.16 F
1077 1078 0.099968 CACTCATCGGCATTGCAAGG 59.900 55.0 11.39 6.76 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1400 1402 1.063649 GCATCGACGGAGAAGCGTA 59.936 57.895 0.00 0.0 0.00 4.42 R
2880 2921 1.262640 GCTGTCCGAGGACCCCTTAA 61.263 60.000 18.57 0.0 43.97 1.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 8.408601 GTGTTCTCGGTTAAATCTATGTACCTA 58.591 37.037 0.00 0.00 0.00 3.08
129 130 8.095792 TCCCTTACGAATCAAAGTGTTTATGTA 58.904 33.333 0.00 0.00 0.00 2.29
211 212 4.563786 GGCTCTTCTAGGTGTAGCTTTTGT 60.564 45.833 0.00 0.00 33.67 2.83
512 513 2.159421 CGTATGTGGTCGCTACTCACTT 60.159 50.000 10.01 7.26 31.73 3.16
636 637 4.711846 AGACATGTAGTGCTCCTATTGTGA 59.288 41.667 0.00 0.00 29.80 3.58
734 735 7.149128 GCGACTTTGTTACTGCTTTATCTTTTG 60.149 37.037 0.00 0.00 0.00 2.44
798 799 4.624015 GGTAAACCCCCTTTTCGAAAAAG 58.376 43.478 22.67 17.06 0.00 2.27
1064 1065 2.833943 TGTCCATCACTGTAGCACTCAT 59.166 45.455 0.00 0.00 0.00 2.90
1077 1078 0.099968 CACTCATCGGCATTGCAAGG 59.900 55.000 11.39 6.76 0.00 3.61
1190 1192 2.429610 TGAGGGGTATTCAAGCTACGAC 59.570 50.000 0.00 0.00 0.00 4.34
1209 1211 7.702772 GCTACGACCCATGATCTATATACAAAG 59.297 40.741 0.00 0.00 0.00 2.77
1215 1217 7.448469 ACCCATGATCTATATACAAAGTTTGGC 59.552 37.037 19.45 0.00 34.12 4.52
1245 1247 8.327429 GTGTTCACAATTAATTTGTTTGGACAG 58.673 33.333 0.00 0.00 46.51 3.51
1270 1272 1.518367 AACCTTCTTGACTGGACCCA 58.482 50.000 0.00 0.00 0.00 4.51
1278 1280 0.399949 TGACTGGACCCAAGGTGTCT 60.400 55.000 0.00 0.00 35.25 3.41
1464 1466 2.361119 CCATGTTGATCCCATGCTTCAG 59.639 50.000 14.11 1.14 38.67 3.02
1546 1548 9.325198 TGCAATTAACTTACGATGTTATCATCT 57.675 29.630 11.14 2.83 45.76 2.90
1614 1616 6.706295 AGAGGGCATAATAGATCTAAAGCAC 58.294 40.000 6.52 9.49 0.00 4.40
1643 1645 7.547370 GCTCAGTCAAGTACTATTGTTGATCTT 59.453 37.037 0.00 0.00 35.76 2.40
1692 1694 3.041211 TCGGGAGAAGATGTTGGATGAT 58.959 45.455 0.00 0.00 34.75 2.45
1706 1708 5.163764 TGTTGGATGATTTCTACGCATTGTC 60.164 40.000 0.00 0.00 0.00 3.18
1775 1777 0.253610 ATCCCAACCGCGATAAACCA 59.746 50.000 8.23 0.00 0.00 3.67
1779 1781 1.004679 AACCGCGATAAACCACCGT 60.005 52.632 8.23 0.00 0.00 4.83
1853 1855 0.108329 CGTAGGAGCCACGACCAAAT 60.108 55.000 0.00 0.00 41.91 2.32
1874 1876 7.277098 CCAAATTGAAGAGGATGCATTACAAAG 59.723 37.037 0.00 0.00 0.00 2.77
1878 1880 6.946340 TGAAGAGGATGCATTACAAAGTCTA 58.054 36.000 0.00 0.00 0.00 2.59
1938 1940 5.912149 AATCAGAGGTCATTGGGCTAATA 57.088 39.130 0.00 0.00 0.00 0.98
1948 1950 5.125417 GTCATTGGGCTAATAGTTGCTTTGA 59.875 40.000 0.00 0.00 0.00 2.69
1959 1961 4.326504 AGTTGCTTTGATCTTTGTTGGG 57.673 40.909 0.00 0.00 0.00 4.12
1967 1969 3.499338 TGATCTTTGTTGGGAAGCACAT 58.501 40.909 0.00 0.00 0.00 3.21
1987 1989 1.406898 TGAGCTCTCAATCTAGTGCCG 59.593 52.381 16.19 0.00 36.81 5.69
1991 1993 1.967066 CTCTCAATCTAGTGCCGGGAT 59.033 52.381 2.18 0.00 0.00 3.85
2075 2077 1.806542 CATCAAGAAACACAGGGACCG 59.193 52.381 0.00 0.00 0.00 4.79
2091 2093 1.805254 CCGGATCGACTACGGTGTT 59.195 57.895 14.13 0.00 42.53 3.32
2189 2191 2.165030 GCAAGGCACATAAGCACTTCAT 59.835 45.455 0.00 0.00 35.83 2.57
2207 2210 5.014123 ACTTCATGGTGTGGATAAAGAAGGA 59.986 40.000 0.00 0.00 36.47 3.36
2410 2415 1.927174 CGAACTTCTTCGCGATCCAAT 59.073 47.619 10.88 0.00 42.72 3.16
2411 2416 3.113322 CGAACTTCTTCGCGATCCAATA 58.887 45.455 10.88 0.00 42.72 1.90
2489 2495 1.200519 CCCTCGTACCCTTGATCCAA 58.799 55.000 0.00 0.00 0.00 3.53
2788 2825 6.127281 CCTTTTAGGAGTAGGAGAGAAGGAAC 60.127 46.154 0.00 0.00 37.67 3.62
2846 2883 2.205342 CCCTTCCCCTAGTCCAATTCA 58.795 52.381 0.00 0.00 0.00 2.57
2880 2921 0.563672 GGGGTGAGGGAGTCCTAGAT 59.436 60.000 9.58 0.00 45.05 1.98
2919 2961 3.973973 AGCTGGACTATATACTTTGGCCA 59.026 43.478 0.00 0.00 0.00 5.36
2944 2986 5.815581 ACTGTTGGGCTATGAAGATACAAA 58.184 37.500 0.00 0.00 0.00 2.83
2990 3033 2.584391 GGGACTCTCCTTGGCGTGT 61.584 63.158 0.00 0.00 36.57 4.49
3004 3047 2.629002 CGTGTAAGGCAAGCTTGGT 58.371 52.632 27.10 0.00 0.00 3.67
3006 3049 1.604604 GTGTAAGGCAAGCTTGGTGA 58.395 50.000 27.10 0.00 0.00 4.02
3030 3073 8.651389 TGATTCGGATATGTAGATTCCTTTCTT 58.349 33.333 0.00 0.00 0.00 2.52
3063 3106 0.326332 GTACAACCCTAGCCCCCTCT 60.326 60.000 0.00 0.00 0.00 3.69
3065 3108 1.306997 CAACCCTAGCCCCCTCTGA 60.307 63.158 0.00 0.00 0.00 3.27
3085 3128 8.642935 CTCTGATGTCTATATAAACCAGAGGA 57.357 38.462 11.71 0.00 41.35 3.71
3103 3146 5.040330 AGAGGATTTAGGCTTCTAGGGTTT 58.960 41.667 0.00 0.00 0.00 3.27
3104 3147 6.099845 CAGAGGATTTAGGCTTCTAGGGTTTA 59.900 42.308 0.00 0.00 0.00 2.01
3106 3149 5.064558 GGATTTAGGCTTCTAGGGTTTAGC 58.935 45.833 0.00 0.00 0.00 3.09
3110 3153 2.781681 GCTTCTAGGGTTTAGCCACA 57.218 50.000 0.26 0.00 39.65 4.17
3162 3207 3.057734 GGGTTTAGCCATTACGATCTCG 58.942 50.000 0.00 0.00 41.74 4.04
3261 3306 2.209690 CCCGAACCTGGGTAAACATT 57.790 50.000 0.00 0.00 44.76 2.71
3270 3315 1.170442 GGGTAAACATTGTGTCCCCG 58.830 55.000 11.04 0.00 0.00 5.73
3276 3321 2.610859 ATTGTGTCCCCGGCCTCT 60.611 61.111 0.00 0.00 0.00 3.69
3299 3344 3.129109 GTTACCATTAGCCTTAGACGCC 58.871 50.000 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.335874 ACGACGCTAGAGTTAATGACATCT 59.664 41.667 0.00 0.00 0.00 2.90
129 130 7.763528 TCAAAATGACTTGTTTATGCACAAACT 59.236 29.630 20.45 1.31 38.85 2.66
211 212 7.040755 AGGTGTTTGATGTTTTCGTTATGATCA 60.041 33.333 0.00 0.00 0.00 2.92
305 306 6.603201 CCAAATAACATGTTGATAGAGGTGGT 59.397 38.462 21.42 0.00 0.00 4.16
512 513 2.192443 CTCCCTAGCCTCCGTCGA 59.808 66.667 0.00 0.00 0.00 4.20
636 637 2.990967 CCACAACCGGCTGGCAAT 60.991 61.111 12.89 0.00 39.70 3.56
734 735 7.545362 AAGATGCATACGGCTCATATTATTC 57.455 36.000 0.00 0.00 45.15 1.75
844 845 9.974980 TTTACGTGCATATAATGAACTCAGATA 57.025 29.630 0.00 0.00 36.63 1.98
941 942 5.412640 TGGCAATATGATTTTCACTGCAAG 58.587 37.500 0.00 0.00 42.29 4.01
1064 1065 2.671276 TTCGCCTTGCAATGCCGA 60.671 55.556 19.26 16.20 0.00 5.54
1077 1078 3.596214 TGGATTAAAGGTGAGTCTTCGC 58.404 45.455 0.00 0.00 0.00 4.70
1190 1192 7.448161 TGCCAAACTTTGTATATAGATCATGGG 59.552 37.037 0.00 0.00 0.00 4.00
1209 1211 2.645730 TTGTGAACACACTGCCAAAC 57.354 45.000 7.16 0.00 41.67 2.93
1262 1264 1.302832 GCAGACACCTTGGGTCCAG 60.303 63.158 0.00 0.00 36.49 3.86
1270 1272 3.181440 TGGAAGAAATGAGCAGACACCTT 60.181 43.478 0.00 0.00 0.00 3.50
1278 1280 1.888512 GGTGCTTGGAAGAAATGAGCA 59.111 47.619 0.00 0.00 40.70 4.26
1400 1402 1.063649 GCATCGACGGAGAAGCGTA 59.936 57.895 0.00 0.00 0.00 4.42
1401 1403 2.202623 GCATCGACGGAGAAGCGT 60.203 61.111 0.00 0.00 0.00 5.07
1614 1616 4.987832 ACAATAGTACTTGACTGAGCTCG 58.012 43.478 9.64 6.63 39.39 5.03
1643 1645 1.380785 CCTAGTAGGCACCGACCCA 60.381 63.158 2.46 0.00 0.00 4.51
1692 1694 5.178061 ACATCATGAGACAATGCGTAGAAA 58.822 37.500 0.09 0.00 0.00 2.52
1706 1708 5.362556 AAGGTCGTTTTCAACATCATGAG 57.637 39.130 0.09 0.00 0.00 2.90
1779 1781 2.407616 CTACATGCTCGGTCGCGA 59.592 61.111 3.71 3.71 0.00 5.87
1853 1855 6.240894 AGACTTTGTAATGCATCCTCTTCAA 58.759 36.000 0.00 0.00 0.00 2.69
1874 1876 9.994432 CATCTTTGTACTTGGAATGAATTAGAC 57.006 33.333 0.00 0.00 0.00 2.59
1878 1880 6.351286 GCCCATCTTTGTACTTGGAATGAATT 60.351 38.462 0.00 0.00 0.00 2.17
1915 1917 4.591321 TTAGCCCAATGACCTCTGATTT 57.409 40.909 0.00 0.00 0.00 2.17
1928 1930 5.509498 AGATCAAAGCAACTATTAGCCCAA 58.491 37.500 0.00 0.00 0.00 4.12
1938 1940 3.960102 TCCCAACAAAGATCAAAGCAACT 59.040 39.130 0.00 0.00 0.00 3.16
1948 1950 3.499338 TCATGTGCTTCCCAACAAAGAT 58.501 40.909 0.00 0.00 0.00 2.40
1959 1961 3.533547 AGATTGAGAGCTCATGTGCTTC 58.466 45.455 22.23 19.38 44.17 3.86
1967 1969 1.406898 CGGCACTAGATTGAGAGCTCA 59.593 52.381 17.77 0.00 37.91 4.26
1987 1989 3.577919 TGAGAAGGTAAGCTCCTATCCC 58.422 50.000 0.00 0.00 36.74 3.85
1991 1993 5.023452 TGTCATTGAGAAGGTAAGCTCCTA 58.977 41.667 0.00 0.00 36.74 2.94
2075 2077 1.392510 GCAAAACACCGTAGTCGATCC 59.607 52.381 0.00 0.00 39.71 3.36
2091 2093 2.173356 CAGGGTATCCATCTCCAGCAAA 59.827 50.000 0.00 0.00 34.83 3.68
2189 2191 5.886609 TCATTTCCTTCTTTATCCACACCA 58.113 37.500 0.00 0.00 0.00 4.17
2207 2210 6.906157 CCTGCTGGGATGTTATATTCATTT 57.094 37.500 0.71 0.00 37.23 2.32
2234 2237 3.482436 GTTCCCCAACATCACAAGTGTA 58.518 45.455 0.00 0.00 32.14 2.90
2375 2380 1.271379 AGTTCGACTACATCAACCGCA 59.729 47.619 0.00 0.00 0.00 5.69
2479 2485 4.142790 CCTCATCCTCAATTGGATCAAGG 58.857 47.826 5.42 4.69 44.38 3.61
2489 2495 3.369892 CGAAACTCACCCTCATCCTCAAT 60.370 47.826 0.00 0.00 0.00 2.57
2616 2629 3.470645 AGTTTCTCTTAACCGTGTGCT 57.529 42.857 0.00 0.00 0.00 4.40
2788 2825 2.303175 CCTTTCCTACTCCCTCTCTCG 58.697 57.143 0.00 0.00 0.00 4.04
2880 2921 1.262640 GCTGTCCGAGGACCCCTTAA 61.263 60.000 18.57 0.00 43.97 1.85
2919 2961 4.716784 TGTATCTTCATAGCCCAACAGTCT 59.283 41.667 0.00 0.00 0.00 3.24
2990 3033 2.083774 CGAATCACCAAGCTTGCCTTA 58.916 47.619 21.43 6.23 31.00 2.69
3004 3047 8.195165 AGAAAGGAATCTACATATCCGAATCA 57.805 34.615 0.00 0.00 38.31 2.57
3006 3049 9.277783 CAAAGAAAGGAATCTACATATCCGAAT 57.722 33.333 0.00 0.00 38.31 3.34
3030 3073 3.876320 GGGTTGTACAAAGTCGGTTACAA 59.124 43.478 10.51 0.00 0.00 2.41
3091 3134 2.747989 GTTGTGGCTAAACCCTAGAAGC 59.252 50.000 0.00 0.00 37.83 3.86
3103 3146 5.172687 TGAGGTTATGATTGTTGTGGCTA 57.827 39.130 0.00 0.00 0.00 3.93
3104 3147 4.032960 TGAGGTTATGATTGTTGTGGCT 57.967 40.909 0.00 0.00 0.00 4.75
3106 3149 5.009010 GCCTATGAGGTTATGATTGTTGTGG 59.991 44.000 0.00 0.00 37.80 4.17
3107 3150 5.824624 AGCCTATGAGGTTATGATTGTTGTG 59.175 40.000 0.00 0.00 37.80 3.33
3108 3151 6.006275 AGCCTATGAGGTTATGATTGTTGT 57.994 37.500 0.00 0.00 37.80 3.32
3109 3152 7.386299 GTCTAGCCTATGAGGTTATGATTGTTG 59.614 40.741 0.00 0.00 37.80 3.33
3110 3153 7.291182 AGTCTAGCCTATGAGGTTATGATTGTT 59.709 37.037 0.00 0.00 37.80 2.83
3162 3207 8.467598 TGAGTATTACAAGAGTTGATCTACCAC 58.532 37.037 3.54 0.00 37.23 4.16
3261 3306 3.636231 CAAGAGGCCGGGGACACA 61.636 66.667 2.18 0.00 0.00 3.72
3276 3321 7.877155 GGGCGTCTAAGGCTAATGGTAACAA 62.877 48.000 0.00 0.00 43.47 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.