Multiple sequence alignment - TraesCS1B01G269400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G269400 chr1B 100.000 4471 0 0 1 4471 473821308 473825778 0.000000e+00 8257.0
1 TraesCS1B01G269400 chr1B 88.855 664 71 1 2795 3455 544997391 544996728 0.000000e+00 813.0
2 TraesCS1B01G269400 chr1B 90.747 281 25 1 1 280 301145946 301146226 1.520000e-99 374.0
3 TraesCS1B01G269400 chr1D 92.895 2097 87 29 452 2530 351245039 351247091 0.000000e+00 2990.0
4 TraesCS1B01G269400 chr1D 96.405 1196 37 4 2691 3884 351247130 351248321 0.000000e+00 1965.0
5 TraesCS1B01G269400 chr1D 87.651 664 79 1 2795 3455 405111105 405110442 0.000000e+00 769.0
6 TraesCS1B01G269400 chr1D 91.139 237 19 2 3906 4141 470826822 470826587 2.010000e-83 320.0
7 TraesCS1B01G269400 chr1D 95.868 121 5 0 4237 4357 470826585 470826465 3.530000e-46 196.0
8 TraesCS1B01G269400 chr1D 100.000 41 0 0 2632 2672 351247088 351247128 4.800000e-10 76.8
9 TraesCS1B01G269400 chr1A 93.773 1365 55 12 441 1797 452018031 452019373 0.000000e+00 2023.0
10 TraesCS1B01G269400 chr1A 97.687 1081 24 1 2632 3711 452020057 452021137 0.000000e+00 1857.0
11 TraesCS1B01G269400 chr1A 92.733 688 47 3 1843 2528 452019372 452020058 0.000000e+00 990.0
12 TraesCS1B01G269400 chr1A 88.253 664 75 1 2795 3455 500563591 500562928 0.000000e+00 791.0
13 TraesCS1B01G269400 chr1A 96.364 110 3 1 337 445 452017887 452017996 3.550000e-41 180.0
14 TraesCS1B01G269400 chr1A 94.828 116 5 1 2524 2638 577843445 577843330 3.550000e-41 180.0
15 TraesCS1B01G269400 chr1A 85.890 163 22 1 4299 4460 451727333 451727171 5.950000e-39 172.0
16 TraesCS1B01G269400 chr5B 87.729 1035 79 21 1211 2218 127703138 127702125 0.000000e+00 1164.0
17 TraesCS1B01G269400 chr5B 84.167 600 52 23 3905 4468 117892393 117892985 3.930000e-150 542.0
18 TraesCS1B01G269400 chr5B 90.357 280 24 3 1 279 425209799 425210076 9.140000e-97 364.0
19 TraesCS1B01G269400 chr5B 90.323 279 26 1 1 279 653346082 653346359 9.140000e-97 364.0
20 TraesCS1B01G269400 chr5B 78.936 470 38 27 4058 4471 595690649 595690185 3.430000e-66 263.0
21 TraesCS1B01G269400 chr5B 88.288 111 9 2 4039 4148 626043895 626044002 3.630000e-26 130.0
22 TraesCS1B01G269400 chr2A 87.646 1028 92 19 1206 2218 689380729 689381736 0.000000e+00 1162.0
23 TraesCS1B01G269400 chr2A 95.614 114 4 1 2520 2633 507071157 507071269 9.880000e-42 182.0
24 TraesCS1B01G269400 chr6B 92.662 586 39 2 1206 1791 270875132 270875713 0.000000e+00 841.0
25 TraesCS1B01G269400 chr6B 83.766 462 26 20 1787 2218 270875742 270876184 4.190000e-105 392.0
26 TraesCS1B01G269400 chr6B 80.488 123 13 6 3905 4020 103156812 103156930 2.870000e-12 84.2
27 TraesCS1B01G269400 chr6B 100.000 28 0 0 3906 3933 75406268 75406295 8.000000e-03 52.8
28 TraesCS1B01G269400 chr5A 89.875 642 38 10 1189 1829 623555802 623555187 0.000000e+00 800.0
29 TraesCS1B01G269400 chr5A 87.669 665 76 4 2794 3455 691670172 691669511 0.000000e+00 769.0
30 TraesCS1B01G269400 chr5A 91.429 420 34 2 993 1412 691671086 691670669 3.880000e-160 575.0
31 TraesCS1B01G269400 chr5A 91.155 407 36 0 991 1397 605152984 605153390 1.820000e-153 553.0
32 TraesCS1B01G269400 chr5A 91.398 279 24 0 1485 1763 691670551 691670273 2.520000e-102 383.0
33 TraesCS1B01G269400 chr5A 94.118 119 6 1 2527 2644 415737604 415737486 3.550000e-41 180.0
34 TraesCS1B01G269400 chr5A 94.118 119 6 1 2523 2641 580937731 580937848 3.550000e-41 180.0
35 TraesCS1B01G269400 chr5A 92.742 124 6 3 2520 2642 69844901 69844780 4.600000e-40 176.0
36 TraesCS1B01G269400 chr5A 94.690 113 6 0 2525 2637 455465757 455465645 4.600000e-40 176.0
37 TraesCS1B01G269400 chr5A 89.706 136 8 5 2505 2640 299768195 299768324 7.690000e-38 169.0
38 TraesCS1B01G269400 chr3A 88.341 669 73 5 2780 3446 578874843 578875508 0.000000e+00 798.0
39 TraesCS1B01G269400 chr3A 83.449 574 80 10 3906 4471 160868135 160867569 1.840000e-143 520.0
40 TraesCS1B01G269400 chr3D 87.704 675 78 5 2780 3452 438943397 438944068 0.000000e+00 782.0
41 TraesCS1B01G269400 chr3D 87.629 582 30 12 3906 4460 580427552 580428118 4.880000e-179 638.0
42 TraesCS1B01G269400 chr3B 87.407 675 80 5 2780 3452 575257453 575258124 0.000000e+00 771.0
43 TraesCS1B01G269400 chr3B 90.000 280 28 0 1 280 24242506 24242785 3.290000e-96 363.0
44 TraesCS1B01G269400 chr5D 91.388 569 36 5 3904 4468 168710957 168711516 0.000000e+00 767.0
45 TraesCS1B01G269400 chr5D 97.436 39 1 0 285 323 51326198 51326236 2.890000e-07 67.6
46 TraesCS1B01G269400 chr5D 94.872 39 2 0 285 323 51249635 51249673 1.340000e-05 62.1
47 TraesCS1B01G269400 chrUn 93.873 408 24 1 989 1396 126673955 126674361 8.220000e-172 614.0
48 TraesCS1B01G269400 chrUn 91.367 278 24 0 1485 1762 126674496 126674773 9.080000e-102 381.0
49 TraesCS1B01G269400 chrUn 79.870 308 23 22 4196 4468 352140715 352141018 5.900000e-44 189.0
50 TraesCS1B01G269400 chrUn 90.291 103 10 0 4052 4154 461780754 461780856 7.800000e-28 135.0
51 TraesCS1B01G269400 chrUn 100.000 29 0 0 3905 3933 305945783 305945811 2.000000e-03 54.7
52 TraesCS1B01G269400 chr4B 93.719 398 25 0 999 1396 654037734 654037337 8.280000e-167 597.0
53 TraesCS1B01G269400 chr4B 91.459 281 24 0 1485 1765 654037207 654036927 1.950000e-103 387.0
54 TraesCS1B01G269400 chr4B 95.652 115 5 0 2519 2633 54038046 54037932 7.640000e-43 185.0
55 TraesCS1B01G269400 chr7A 92.211 398 31 0 1001 1398 663529035 663529432 8.400000e-157 564.0
56 TraesCS1B01G269400 chr7A 89.691 194 12 5 4278 4468 5203083 5203271 1.610000e-59 241.0
57 TraesCS1B01G269400 chr6A 92.405 395 30 0 1003 1397 115944849 115945243 8.400000e-157 564.0
58 TraesCS1B01G269400 chr7D 91.960 398 32 0 1001 1398 573692185 573692582 3.910000e-155 558.0
59 TraesCS1B01G269400 chr7D 91.339 127 7 4 2508 2633 623644426 623644549 2.140000e-38 171.0
60 TraesCS1B01G269400 chr7D 89.773 88 7 2 4300 4386 514909198 514909284 1.310000e-20 111.0
61 TraesCS1B01G269400 chr2D 90.244 410 30 6 4064 4468 234355179 234355583 1.100000e-145 527.0
62 TraesCS1B01G269400 chr2D 92.174 115 7 2 4287 4399 598615333 598615219 1.290000e-35 161.0
63 TraesCS1B01G269400 chr2D 93.023 43 2 1 285 327 103022834 103022793 1.340000e-05 62.1
64 TraesCS1B01G269400 chr7B 91.697 277 21 2 3 279 524245936 524246210 2.520000e-102 383.0
65 TraesCS1B01G269400 chr7B 90.357 280 25 2 1 279 451652113 451651835 2.540000e-97 366.0
66 TraesCS1B01G269400 chr2B 91.103 281 23 2 1 280 74788023 74788302 3.260000e-101 379.0
67 TraesCS1B01G269400 chr2B 90.323 279 27 0 1 279 616416822 616417100 2.540000e-97 366.0
68 TraesCS1B01G269400 chr2B 90.000 280 26 2 1 279 279082615 279082893 1.180000e-95 361.0
69 TraesCS1B01G269400 chr4D 87.755 98 12 0 4299 4396 144868224 144868321 1.020000e-21 115.0
70 TraesCS1B01G269400 chr4A 93.333 45 3 0 285 329 45150266 45150222 2.890000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G269400 chr1B 473821308 473825778 4470 False 8257.000000 8257 100.000000 1 4471 1 chr1B.!!$F2 4470
1 TraesCS1B01G269400 chr1B 544996728 544997391 663 True 813.000000 813 88.855000 2795 3455 1 chr1B.!!$R1 660
2 TraesCS1B01G269400 chr1D 351245039 351248321 3282 False 1677.266667 2990 96.433333 452 3884 3 chr1D.!!$F1 3432
3 TraesCS1B01G269400 chr1D 405110442 405111105 663 True 769.000000 769 87.651000 2795 3455 1 chr1D.!!$R1 660
4 TraesCS1B01G269400 chr1A 452017887 452021137 3250 False 1262.500000 2023 95.139250 337 3711 4 chr1A.!!$F1 3374
5 TraesCS1B01G269400 chr1A 500562928 500563591 663 True 791.000000 791 88.253000 2795 3455 1 chr1A.!!$R2 660
6 TraesCS1B01G269400 chr5B 127702125 127703138 1013 True 1164.000000 1164 87.729000 1211 2218 1 chr5B.!!$R1 1007
7 TraesCS1B01G269400 chr5B 117892393 117892985 592 False 542.000000 542 84.167000 3905 4468 1 chr5B.!!$F1 563
8 TraesCS1B01G269400 chr2A 689380729 689381736 1007 False 1162.000000 1162 87.646000 1206 2218 1 chr2A.!!$F2 1012
9 TraesCS1B01G269400 chr6B 270875132 270876184 1052 False 616.500000 841 88.214000 1206 2218 2 chr6B.!!$F3 1012
10 TraesCS1B01G269400 chr5A 623555187 623555802 615 True 800.000000 800 89.875000 1189 1829 1 chr5A.!!$R4 640
11 TraesCS1B01G269400 chr5A 691669511 691671086 1575 True 575.666667 769 90.165333 993 3455 3 chr5A.!!$R5 2462
12 TraesCS1B01G269400 chr3A 578874843 578875508 665 False 798.000000 798 88.341000 2780 3446 1 chr3A.!!$F1 666
13 TraesCS1B01G269400 chr3A 160867569 160868135 566 True 520.000000 520 83.449000 3906 4471 1 chr3A.!!$R1 565
14 TraesCS1B01G269400 chr3D 438943397 438944068 671 False 782.000000 782 87.704000 2780 3452 1 chr3D.!!$F1 672
15 TraesCS1B01G269400 chr3D 580427552 580428118 566 False 638.000000 638 87.629000 3906 4460 1 chr3D.!!$F2 554
16 TraesCS1B01G269400 chr3B 575257453 575258124 671 False 771.000000 771 87.407000 2780 3452 1 chr3B.!!$F2 672
17 TraesCS1B01G269400 chr5D 168710957 168711516 559 False 767.000000 767 91.388000 3904 4468 1 chr5D.!!$F3 564
18 TraesCS1B01G269400 chrUn 126673955 126674773 818 False 497.500000 614 92.620000 989 1762 2 chrUn.!!$F4 773
19 TraesCS1B01G269400 chr4B 654036927 654037734 807 True 492.000000 597 92.589000 999 1765 2 chr4B.!!$R2 766

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
857 912 0.105778 CTCTGCTCCCCGATTTCTCC 59.894 60.000 0.0 0.0 0.00 3.71 F
859 914 0.179062 CTGCTCCCCGATTTCTCCAG 60.179 60.000 0.0 0.0 0.00 3.86 F
1433 1522 0.674895 GAGTCGCTCCAGTTGCCAAT 60.675 55.000 0.0 0.0 0.00 3.16 F
2176 2400 1.133790 GATGCCATGTTGGAAGCTGAC 59.866 52.381 0.0 0.0 40.96 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2615 2840 0.038744 AGTACTCCCTCCGTTCCGAA 59.961 55.0 0.0 0.0 0.0 4.30 R
2617 2842 0.893447 AAAGTACTCCCTCCGTTCCG 59.107 55.0 0.0 0.0 0.0 4.30 R
2618 2843 2.038164 ACAAAAGTACTCCCTCCGTTCC 59.962 50.0 0.0 0.0 0.0 3.62 R
3852 4188 0.036732 ACAACCTGCATCCGTCACAT 59.963 50.0 0.0 0.0 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.689414 CATTGCTTGCCTGCCTGA 58.311 55.556 0.00 0.00 0.00 3.86
18 19 2.199117 CATTGCTTGCCTGCCTGAT 58.801 52.632 0.00 0.00 0.00 2.90
19 20 0.535335 CATTGCTTGCCTGCCTGATT 59.465 50.000 0.00 0.00 0.00 2.57
20 21 0.822164 ATTGCTTGCCTGCCTGATTC 59.178 50.000 0.00 0.00 0.00 2.52
21 22 1.588824 TTGCTTGCCTGCCTGATTCG 61.589 55.000 0.00 0.00 0.00 3.34
22 23 2.042831 GCTTGCCTGCCTGATTCGT 61.043 57.895 0.00 0.00 0.00 3.85
23 24 1.589716 GCTTGCCTGCCTGATTCGTT 61.590 55.000 0.00 0.00 0.00 3.85
24 25 0.883833 CTTGCCTGCCTGATTCGTTT 59.116 50.000 0.00 0.00 0.00 3.60
25 26 0.597568 TTGCCTGCCTGATTCGTTTG 59.402 50.000 0.00 0.00 0.00 2.93
26 27 0.250684 TGCCTGCCTGATTCGTTTGA 60.251 50.000 0.00 0.00 0.00 2.69
27 28 0.169009 GCCTGCCTGATTCGTTTGAC 59.831 55.000 0.00 0.00 0.00 3.18
28 29 1.813513 CCTGCCTGATTCGTTTGACT 58.186 50.000 0.00 0.00 0.00 3.41
29 30 2.154462 CCTGCCTGATTCGTTTGACTT 58.846 47.619 0.00 0.00 0.00 3.01
30 31 2.160417 CCTGCCTGATTCGTTTGACTTC 59.840 50.000 0.00 0.00 0.00 3.01
31 32 2.807967 CTGCCTGATTCGTTTGACTTCA 59.192 45.455 0.00 0.00 0.00 3.02
32 33 3.411446 TGCCTGATTCGTTTGACTTCAT 58.589 40.909 0.00 0.00 0.00 2.57
33 34 3.436704 TGCCTGATTCGTTTGACTTCATC 59.563 43.478 0.00 0.00 0.00 2.92
34 35 3.484229 GCCTGATTCGTTTGACTTCATCG 60.484 47.826 0.00 0.00 0.00 3.84
35 36 3.679980 CCTGATTCGTTTGACTTCATCGT 59.320 43.478 4.92 0.00 0.00 3.73
36 37 4.434725 CCTGATTCGTTTGACTTCATCGTG 60.435 45.833 4.92 0.00 0.00 4.35
37 38 4.055360 TGATTCGTTTGACTTCATCGTGT 58.945 39.130 4.92 0.00 0.00 4.49
38 39 3.852471 TTCGTTTGACTTCATCGTGTG 57.148 42.857 4.92 0.00 0.00 3.82
39 40 3.086818 TCGTTTGACTTCATCGTGTGA 57.913 42.857 4.92 0.00 34.25 3.58
40 41 3.449632 TCGTTTGACTTCATCGTGTGAA 58.550 40.909 6.00 6.00 44.36 3.18
50 51 5.591643 TTCATCGTGTGAAGACTTTTAGC 57.408 39.130 2.63 0.00 41.79 3.09
51 52 4.883083 TCATCGTGTGAAGACTTTTAGCT 58.117 39.130 0.00 0.00 32.78 3.32
52 53 4.686091 TCATCGTGTGAAGACTTTTAGCTG 59.314 41.667 0.00 0.00 32.78 4.24
53 54 4.054780 TCGTGTGAAGACTTTTAGCTGT 57.945 40.909 0.00 0.00 0.00 4.40
54 55 4.439057 TCGTGTGAAGACTTTTAGCTGTT 58.561 39.130 0.00 0.00 0.00 3.16
55 56 4.873827 TCGTGTGAAGACTTTTAGCTGTTT 59.126 37.500 0.00 0.00 0.00 2.83
56 57 6.044046 TCGTGTGAAGACTTTTAGCTGTTTA 58.956 36.000 0.00 0.00 0.00 2.01
57 58 6.200286 TCGTGTGAAGACTTTTAGCTGTTTAG 59.800 38.462 0.00 0.00 0.00 1.85
74 75 8.383318 GCTGTTTAGCTTCATATTATCTTCCA 57.617 34.615 0.00 0.00 46.57 3.53
75 76 9.007901 GCTGTTTAGCTTCATATTATCTTCCAT 57.992 33.333 0.00 0.00 46.57 3.41
83 84 9.323985 GCTTCATATTATCTTCCATACTGATCC 57.676 37.037 0.00 0.00 0.00 3.36
86 87 9.552695 TCATATTATCTTCCATACTGATCCTGT 57.447 33.333 0.00 0.00 0.00 4.00
87 88 9.814899 CATATTATCTTCCATACTGATCCTGTC 57.185 37.037 0.00 0.00 0.00 3.51
88 89 9.781425 ATATTATCTTCCATACTGATCCTGTCT 57.219 33.333 0.00 0.00 0.00 3.41
90 91 6.909550 ATCTTCCATACTGATCCTGTCTAC 57.090 41.667 0.00 0.00 0.00 2.59
91 92 5.141182 TCTTCCATACTGATCCTGTCTACC 58.859 45.833 0.00 0.00 0.00 3.18
92 93 4.816048 TCCATACTGATCCTGTCTACCT 57.184 45.455 0.00 0.00 0.00 3.08
93 94 5.924769 TCCATACTGATCCTGTCTACCTA 57.075 43.478 0.00 0.00 0.00 3.08
94 95 5.882040 TCCATACTGATCCTGTCTACCTAG 58.118 45.833 0.00 0.00 0.00 3.02
95 96 5.372959 TCCATACTGATCCTGTCTACCTAGT 59.627 44.000 0.00 0.00 0.00 2.57
96 97 6.071984 CCATACTGATCCTGTCTACCTAGTT 58.928 44.000 0.00 0.00 0.00 2.24
97 98 6.015856 CCATACTGATCCTGTCTACCTAGTTG 60.016 46.154 0.00 0.00 0.00 3.16
98 99 3.702045 ACTGATCCTGTCTACCTAGTTGC 59.298 47.826 0.00 0.00 0.00 4.17
99 100 3.701542 CTGATCCTGTCTACCTAGTTGCA 59.298 47.826 0.00 0.00 0.00 4.08
100 101 3.701542 TGATCCTGTCTACCTAGTTGCAG 59.298 47.826 0.00 0.00 0.00 4.41
101 102 3.170991 TCCTGTCTACCTAGTTGCAGT 57.829 47.619 0.00 0.00 0.00 4.40
102 103 3.507411 TCCTGTCTACCTAGTTGCAGTT 58.493 45.455 0.00 0.00 0.00 3.16
103 104 4.669700 TCCTGTCTACCTAGTTGCAGTTA 58.330 43.478 0.00 0.00 0.00 2.24
104 105 4.705507 TCCTGTCTACCTAGTTGCAGTTAG 59.294 45.833 0.00 0.00 0.00 2.34
105 106 4.463186 CCTGTCTACCTAGTTGCAGTTAGT 59.537 45.833 6.01 0.00 0.00 2.24
106 107 5.393243 CCTGTCTACCTAGTTGCAGTTAGTC 60.393 48.000 6.01 0.00 0.00 2.59
107 108 5.322754 TGTCTACCTAGTTGCAGTTAGTCT 58.677 41.667 6.01 0.00 0.00 3.24
108 109 5.773680 TGTCTACCTAGTTGCAGTTAGTCTT 59.226 40.000 6.01 0.00 0.00 3.01
109 110 6.072064 TGTCTACCTAGTTGCAGTTAGTCTTC 60.072 42.308 6.01 0.00 0.00 2.87
110 111 6.008331 TCTACCTAGTTGCAGTTAGTCTTCA 58.992 40.000 6.01 0.00 0.00 3.02
111 112 5.746990 ACCTAGTTGCAGTTAGTCTTCAT 57.253 39.130 6.01 0.00 0.00 2.57
112 113 5.482908 ACCTAGTTGCAGTTAGTCTTCATG 58.517 41.667 6.01 0.00 0.00 3.07
113 114 4.331168 CCTAGTTGCAGTTAGTCTTCATGC 59.669 45.833 6.01 0.00 37.40 4.06
114 115 3.077359 AGTTGCAGTTAGTCTTCATGCC 58.923 45.455 0.00 0.00 36.04 4.40
115 116 3.077359 GTTGCAGTTAGTCTTCATGCCT 58.923 45.455 0.00 0.00 36.04 4.75
116 117 3.423539 TGCAGTTAGTCTTCATGCCTT 57.576 42.857 0.00 0.00 36.04 4.35
117 118 3.754965 TGCAGTTAGTCTTCATGCCTTT 58.245 40.909 0.00 0.00 36.04 3.11
118 119 3.753272 TGCAGTTAGTCTTCATGCCTTTC 59.247 43.478 0.00 0.00 36.04 2.62
119 120 3.753272 GCAGTTAGTCTTCATGCCTTTCA 59.247 43.478 0.00 0.00 0.00 2.69
120 121 4.397417 GCAGTTAGTCTTCATGCCTTTCAT 59.603 41.667 0.00 0.00 35.31 2.57
132 133 6.080648 CATGCCTTTCATGTATTGTATGCT 57.919 37.500 0.00 0.00 45.79 3.79
133 134 6.509656 CATGCCTTTCATGTATTGTATGCTT 58.490 36.000 0.00 0.00 45.79 3.91
134 135 5.893687 TGCCTTTCATGTATTGTATGCTTG 58.106 37.500 0.00 0.00 0.00 4.01
135 136 5.651576 TGCCTTTCATGTATTGTATGCTTGA 59.348 36.000 0.00 0.00 0.00 3.02
136 137 5.973565 GCCTTTCATGTATTGTATGCTTGAC 59.026 40.000 0.00 0.00 30.95 3.18
137 138 6.183360 GCCTTTCATGTATTGTATGCTTGACT 60.183 38.462 0.00 0.00 30.95 3.41
138 139 7.012327 GCCTTTCATGTATTGTATGCTTGACTA 59.988 37.037 0.00 0.00 30.95 2.59
139 140 8.892723 CCTTTCATGTATTGTATGCTTGACTAA 58.107 33.333 0.00 0.00 30.95 2.24
142 143 7.864686 TCATGTATTGTATGCTTGACTAATGC 58.135 34.615 0.00 0.00 0.00 3.56
143 144 7.716560 TCATGTATTGTATGCTTGACTAATGCT 59.283 33.333 0.00 0.00 0.00 3.79
144 145 7.482654 TGTATTGTATGCTTGACTAATGCTC 57.517 36.000 0.00 0.00 0.00 4.26
145 146 5.663795 ATTGTATGCTTGACTAATGCTCG 57.336 39.130 0.00 0.00 0.00 5.03
146 147 2.866156 TGTATGCTTGACTAATGCTCGC 59.134 45.455 0.00 0.00 0.00 5.03
147 148 1.303309 ATGCTTGACTAATGCTCGCC 58.697 50.000 0.00 0.00 0.00 5.54
148 149 0.250234 TGCTTGACTAATGCTCGCCT 59.750 50.000 0.00 0.00 0.00 5.52
149 150 1.480545 TGCTTGACTAATGCTCGCCTA 59.519 47.619 0.00 0.00 0.00 3.93
150 151 2.131183 GCTTGACTAATGCTCGCCTAG 58.869 52.381 0.00 0.00 0.00 3.02
151 152 2.482142 GCTTGACTAATGCTCGCCTAGT 60.482 50.000 1.72 1.72 0.00 2.57
152 153 2.871182 TGACTAATGCTCGCCTAGTG 57.129 50.000 5.75 0.00 0.00 2.74
153 154 2.100197 TGACTAATGCTCGCCTAGTGT 58.900 47.619 5.75 0.00 0.00 3.55
154 155 3.284617 TGACTAATGCTCGCCTAGTGTA 58.715 45.455 5.75 0.00 0.00 2.90
155 156 3.315470 TGACTAATGCTCGCCTAGTGTAG 59.685 47.826 5.75 0.00 0.00 2.74
156 157 3.288964 ACTAATGCTCGCCTAGTGTAGT 58.711 45.455 0.00 0.00 0.00 2.73
157 158 3.700038 ACTAATGCTCGCCTAGTGTAGTT 59.300 43.478 0.00 0.00 0.00 2.24
158 159 3.611766 AATGCTCGCCTAGTGTAGTTT 57.388 42.857 0.00 0.00 0.00 2.66
159 160 3.611766 ATGCTCGCCTAGTGTAGTTTT 57.388 42.857 0.00 0.00 0.00 2.43
160 161 2.955614 TGCTCGCCTAGTGTAGTTTTC 58.044 47.619 0.00 0.00 0.00 2.29
161 162 2.297880 TGCTCGCCTAGTGTAGTTTTCA 59.702 45.455 0.00 0.00 0.00 2.69
162 163 3.056107 TGCTCGCCTAGTGTAGTTTTCAT 60.056 43.478 0.00 0.00 0.00 2.57
163 164 3.933332 GCTCGCCTAGTGTAGTTTTCATT 59.067 43.478 0.00 0.00 0.00 2.57
164 165 4.033014 GCTCGCCTAGTGTAGTTTTCATTC 59.967 45.833 0.00 0.00 0.00 2.67
165 166 4.501071 TCGCCTAGTGTAGTTTTCATTCC 58.499 43.478 0.00 0.00 0.00 3.01
166 167 3.306166 CGCCTAGTGTAGTTTTCATTCCG 59.694 47.826 0.00 0.00 0.00 4.30
167 168 3.063588 GCCTAGTGTAGTTTTCATTCCGC 59.936 47.826 0.00 0.00 0.00 5.54
168 169 4.504858 CCTAGTGTAGTTTTCATTCCGCT 58.495 43.478 0.00 0.00 0.00 5.52
169 170 4.330074 CCTAGTGTAGTTTTCATTCCGCTG 59.670 45.833 0.00 0.00 0.00 5.18
170 171 2.484264 AGTGTAGTTTTCATTCCGCTGC 59.516 45.455 0.00 0.00 0.00 5.25
171 172 2.484264 GTGTAGTTTTCATTCCGCTGCT 59.516 45.455 0.00 0.00 0.00 4.24
172 173 3.058224 GTGTAGTTTTCATTCCGCTGCTT 60.058 43.478 0.00 0.00 0.00 3.91
173 174 4.153475 GTGTAGTTTTCATTCCGCTGCTTA 59.847 41.667 0.00 0.00 0.00 3.09
174 175 3.831715 AGTTTTCATTCCGCTGCTTAC 57.168 42.857 0.00 0.00 0.00 2.34
175 176 3.412386 AGTTTTCATTCCGCTGCTTACT 58.588 40.909 0.00 0.00 0.00 2.24
176 177 4.575885 AGTTTTCATTCCGCTGCTTACTA 58.424 39.130 0.00 0.00 0.00 1.82
177 178 5.186198 AGTTTTCATTCCGCTGCTTACTAT 58.814 37.500 0.00 0.00 0.00 2.12
178 179 6.346096 AGTTTTCATTCCGCTGCTTACTATA 58.654 36.000 0.00 0.00 0.00 1.31
179 180 6.992715 AGTTTTCATTCCGCTGCTTACTATAT 59.007 34.615 0.00 0.00 0.00 0.86
180 181 8.148351 AGTTTTCATTCCGCTGCTTACTATATA 58.852 33.333 0.00 0.00 0.00 0.86
181 182 8.936864 GTTTTCATTCCGCTGCTTACTATATAT 58.063 33.333 0.00 0.00 0.00 0.86
182 183 8.479313 TTTCATTCCGCTGCTTACTATATATG 57.521 34.615 0.00 0.00 0.00 1.78
183 184 6.042777 TCATTCCGCTGCTTACTATATATGC 58.957 40.000 0.00 0.00 0.00 3.14
184 185 5.661056 TTCCGCTGCTTACTATATATGCT 57.339 39.130 0.00 0.00 0.00 3.79
185 186 5.250235 TCCGCTGCTTACTATATATGCTC 57.750 43.478 0.00 0.00 0.00 4.26
186 187 4.705023 TCCGCTGCTTACTATATATGCTCA 59.295 41.667 0.00 0.00 0.00 4.26
187 188 5.039984 CCGCTGCTTACTATATATGCTCAG 58.960 45.833 0.00 0.00 0.00 3.35
188 189 5.393569 CCGCTGCTTACTATATATGCTCAGT 60.394 44.000 0.00 0.00 0.00 3.41
189 190 6.096036 CGCTGCTTACTATATATGCTCAGTT 58.904 40.000 0.00 0.00 0.00 3.16
190 191 6.587990 CGCTGCTTACTATATATGCTCAGTTT 59.412 38.462 0.00 0.00 0.00 2.66
191 192 7.755373 CGCTGCTTACTATATATGCTCAGTTTA 59.245 37.037 0.00 0.00 0.00 2.01
192 193 8.865001 GCTGCTTACTATATATGCTCAGTTTAC 58.135 37.037 0.00 0.00 0.00 2.01
193 194 9.360093 CTGCTTACTATATATGCTCAGTTTACC 57.640 37.037 0.00 0.00 0.00 2.85
194 195 9.090103 TGCTTACTATATATGCTCAGTTTACCT 57.910 33.333 0.00 0.00 0.00 3.08
195 196 9.360093 GCTTACTATATATGCTCAGTTTACCTG 57.640 37.037 0.00 0.00 42.97 4.00
199 200 9.547753 ACTATATATGCTCAGTTTACCTGTTTG 57.452 33.333 0.00 0.00 42.19 2.93
200 201 9.547753 CTATATATGCTCAGTTTACCTGTTTGT 57.452 33.333 0.00 0.00 42.19 2.83
201 202 6.743575 ATATGCTCAGTTTACCTGTTTGTC 57.256 37.500 0.00 0.00 42.19 3.18
202 203 4.150897 TGCTCAGTTTACCTGTTTGTCT 57.849 40.909 0.00 0.00 42.19 3.41
203 204 4.523083 TGCTCAGTTTACCTGTTTGTCTT 58.477 39.130 0.00 0.00 42.19 3.01
204 205 4.574828 TGCTCAGTTTACCTGTTTGTCTTC 59.425 41.667 0.00 0.00 42.19 2.87
205 206 4.574828 GCTCAGTTTACCTGTTTGTCTTCA 59.425 41.667 0.00 0.00 42.19 3.02
206 207 5.065988 GCTCAGTTTACCTGTTTGTCTTCAA 59.934 40.000 0.00 0.00 42.19 2.69
207 208 6.404293 GCTCAGTTTACCTGTTTGTCTTCAAA 60.404 38.462 0.00 0.00 42.19 2.69
208 209 7.083875 TCAGTTTACCTGTTTGTCTTCAAAG 57.916 36.000 0.00 0.00 43.04 2.77
209 210 5.743872 CAGTTTACCTGTTTGTCTTCAAAGC 59.256 40.000 0.00 0.00 43.04 3.51
210 211 5.652452 AGTTTACCTGTTTGTCTTCAAAGCT 59.348 36.000 0.00 0.00 43.04 3.74
211 212 6.826741 AGTTTACCTGTTTGTCTTCAAAGCTA 59.173 34.615 0.00 0.00 43.04 3.32
212 213 6.613755 TTACCTGTTTGTCTTCAAAGCTAC 57.386 37.500 0.00 0.00 43.04 3.58
213 214 3.883489 ACCTGTTTGTCTTCAAAGCTACC 59.117 43.478 0.00 0.00 43.04 3.18
214 215 3.058914 CCTGTTTGTCTTCAAAGCTACCG 60.059 47.826 0.00 0.00 43.04 4.02
215 216 3.537580 TGTTTGTCTTCAAAGCTACCGT 58.462 40.909 0.00 0.00 43.04 4.83
216 217 3.311322 TGTTTGTCTTCAAAGCTACCGTG 59.689 43.478 0.00 0.00 43.04 4.94
217 218 2.902705 TGTCTTCAAAGCTACCGTGT 57.097 45.000 0.00 0.00 0.00 4.49
218 219 3.188159 TGTCTTCAAAGCTACCGTGTT 57.812 42.857 0.00 0.00 0.00 3.32
219 220 3.537580 TGTCTTCAAAGCTACCGTGTTT 58.462 40.909 0.00 0.00 0.00 2.83
220 221 3.942748 TGTCTTCAAAGCTACCGTGTTTT 59.057 39.130 0.00 0.00 0.00 2.43
221 222 5.117584 TGTCTTCAAAGCTACCGTGTTTTA 58.882 37.500 0.00 0.00 0.00 1.52
222 223 5.585445 TGTCTTCAAAGCTACCGTGTTTTAA 59.415 36.000 0.00 0.00 0.00 1.52
223 224 6.093771 TGTCTTCAAAGCTACCGTGTTTTAAA 59.906 34.615 0.00 0.00 0.00 1.52
224 225 7.136772 GTCTTCAAAGCTACCGTGTTTTAAAT 58.863 34.615 0.00 0.00 0.00 1.40
225 226 8.284693 GTCTTCAAAGCTACCGTGTTTTAAATA 58.715 33.333 0.00 0.00 0.00 1.40
226 227 8.284693 TCTTCAAAGCTACCGTGTTTTAAATAC 58.715 33.333 0.00 0.00 0.00 1.89
227 228 7.733402 TCAAAGCTACCGTGTTTTAAATACT 57.267 32.000 3.32 0.00 0.00 2.12
228 229 8.156994 TCAAAGCTACCGTGTTTTAAATACTT 57.843 30.769 3.32 0.00 0.00 2.24
229 230 8.623030 TCAAAGCTACCGTGTTTTAAATACTTT 58.377 29.630 3.32 0.00 0.00 2.66
230 231 9.240159 CAAAGCTACCGTGTTTTAAATACTTTT 57.760 29.630 3.32 0.00 0.00 2.27
256 257 5.830000 AAAAACGCCTATTCATAACCCTC 57.170 39.130 0.00 0.00 0.00 4.30
257 258 4.772886 AAACGCCTATTCATAACCCTCT 57.227 40.909 0.00 0.00 0.00 3.69
258 259 5.881923 AAACGCCTATTCATAACCCTCTA 57.118 39.130 0.00 0.00 0.00 2.43
259 260 5.470047 AACGCCTATTCATAACCCTCTAG 57.530 43.478 0.00 0.00 0.00 2.43
260 261 4.481072 ACGCCTATTCATAACCCTCTAGT 58.519 43.478 0.00 0.00 0.00 2.57
261 262 4.900054 ACGCCTATTCATAACCCTCTAGTT 59.100 41.667 0.00 0.00 0.00 2.24
262 263 5.221461 ACGCCTATTCATAACCCTCTAGTTG 60.221 44.000 0.00 0.00 0.00 3.16
263 264 5.010719 CGCCTATTCATAACCCTCTAGTTGA 59.989 44.000 0.00 0.00 0.00 3.18
264 265 6.295349 CGCCTATTCATAACCCTCTAGTTGAT 60.295 42.308 0.00 0.00 0.00 2.57
265 266 7.093902 CGCCTATTCATAACCCTCTAGTTGATA 60.094 40.741 0.00 0.00 0.00 2.15
266 267 8.594550 GCCTATTCATAACCCTCTAGTTGATAA 58.405 37.037 0.00 0.00 0.00 1.75
267 268 9.930693 CCTATTCATAACCCTCTAGTTGATAAC 57.069 37.037 0.00 0.00 0.00 1.89
282 283 5.864474 AGTTGATAACTAGCACTTTCACTCG 59.136 40.000 0.00 0.00 40.69 4.18
283 284 5.386958 TGATAACTAGCACTTTCACTCGT 57.613 39.130 0.00 0.00 0.00 4.18
284 285 5.161358 TGATAACTAGCACTTTCACTCGTG 58.839 41.667 0.00 0.00 0.00 4.35
285 286 3.728076 AACTAGCACTTTCACTCGTGA 57.272 42.857 0.00 0.00 37.91 4.35
286 287 3.944055 ACTAGCACTTTCACTCGTGAT 57.056 42.857 0.00 0.00 39.64 3.06
287 288 4.258702 ACTAGCACTTTCACTCGTGATT 57.741 40.909 0.00 0.00 39.64 2.57
288 289 5.386958 ACTAGCACTTTCACTCGTGATTA 57.613 39.130 0.00 0.00 39.64 1.75
289 290 5.967088 ACTAGCACTTTCACTCGTGATTAT 58.033 37.500 0.00 0.00 39.64 1.28
290 291 7.096884 ACTAGCACTTTCACTCGTGATTATA 57.903 36.000 0.00 0.00 39.64 0.98
291 292 7.544622 ACTAGCACTTTCACTCGTGATTATAA 58.455 34.615 0.00 0.00 39.64 0.98
292 293 6.648725 AGCACTTTCACTCGTGATTATAAC 57.351 37.500 0.00 0.00 39.64 1.89
293 294 5.581085 AGCACTTTCACTCGTGATTATAACC 59.419 40.000 0.00 0.00 39.64 2.85
294 295 5.581085 GCACTTTCACTCGTGATTATAACCT 59.419 40.000 0.00 0.00 39.64 3.50
295 296 6.092259 GCACTTTCACTCGTGATTATAACCTT 59.908 38.462 0.00 0.00 39.64 3.50
296 297 7.277098 GCACTTTCACTCGTGATTATAACCTTA 59.723 37.037 0.00 0.00 39.64 2.69
297 298 9.314321 CACTTTCACTCGTGATTATAACCTTAT 57.686 33.333 0.00 0.00 39.64 1.73
324 325 9.725019 AATTTTGGAATAAAACTCCCTTTCATC 57.275 29.630 0.00 0.00 31.32 2.92
325 326 6.850752 TTGGAATAAAACTCCCTTTCATCC 57.149 37.500 0.00 0.00 31.32 3.51
326 327 6.152638 TGGAATAAAACTCCCTTTCATCCT 57.847 37.500 0.00 0.00 31.32 3.24
327 328 5.951747 TGGAATAAAACTCCCTTTCATCCTG 59.048 40.000 0.00 0.00 31.32 3.86
328 329 6.187682 GGAATAAAACTCCCTTTCATCCTGA 58.812 40.000 0.00 0.00 0.00 3.86
329 330 6.836007 GGAATAAAACTCCCTTTCATCCTGAT 59.164 38.462 0.00 0.00 0.00 2.90
330 331 7.343057 GGAATAAAACTCCCTTTCATCCTGATT 59.657 37.037 0.00 0.00 0.00 2.57
331 332 8.670521 AATAAAACTCCCTTTCATCCTGATTT 57.329 30.769 0.00 0.00 0.00 2.17
332 333 8.670521 ATAAAACTCCCTTTCATCCTGATTTT 57.329 30.769 0.00 0.00 0.00 1.82
333 334 7.379059 AAAACTCCCTTTCATCCTGATTTTT 57.621 32.000 0.00 0.00 0.00 1.94
387 388 3.395639 TGGACGTCCAACTATTTGTGTC 58.604 45.455 34.60 3.18 44.35 3.67
447 449 3.805971 CGACCCTATCGTATTTCCAAACC 59.194 47.826 0.00 0.00 46.25 3.27
450 452 2.546789 CCTATCGTATTTCCAAACCGCC 59.453 50.000 0.00 0.00 0.00 6.13
451 453 1.385528 ATCGTATTTCCAAACCGCCC 58.614 50.000 0.00 0.00 0.00 6.13
452 454 0.677414 TCGTATTTCCAAACCGCCCC 60.677 55.000 0.00 0.00 0.00 5.80
453 455 0.961358 CGTATTTCCAAACCGCCCCA 60.961 55.000 0.00 0.00 0.00 4.96
454 456 0.528924 GTATTTCCAAACCGCCCCAC 59.471 55.000 0.00 0.00 0.00 4.61
455 457 0.112606 TATTTCCAAACCGCCCCACA 59.887 50.000 0.00 0.00 0.00 4.17
777 824 1.230956 AACCCAATCCCCATCCCCT 60.231 57.895 0.00 0.00 0.00 4.79
779 826 2.473365 CCCAATCCCCATCCCCTCC 61.473 68.421 0.00 0.00 0.00 4.30
781 828 2.450502 AATCCCCATCCCCTCCCG 60.451 66.667 0.00 0.00 0.00 5.14
786 833 4.888325 CCATCCCCTCCCGCTCCT 62.888 72.222 0.00 0.00 0.00 3.69
855 910 1.524482 GCTCTGCTCCCCGATTTCT 59.476 57.895 0.00 0.00 0.00 2.52
856 911 0.531753 GCTCTGCTCCCCGATTTCTC 60.532 60.000 0.00 0.00 0.00 2.87
857 912 0.105778 CTCTGCTCCCCGATTTCTCC 59.894 60.000 0.00 0.00 0.00 3.71
858 913 0.617535 TCTGCTCCCCGATTTCTCCA 60.618 55.000 0.00 0.00 0.00 3.86
859 914 0.179062 CTGCTCCCCGATTTCTCCAG 60.179 60.000 0.00 0.00 0.00 3.86
860 915 1.524849 GCTCCCCGATTTCTCCAGC 60.525 63.158 0.00 0.00 0.00 4.85
861 916 1.227380 CTCCCCGATTTCTCCAGCG 60.227 63.158 0.00 0.00 0.00 5.18
862 917 2.897350 CCCCGATTTCTCCAGCGC 60.897 66.667 0.00 0.00 0.00 5.92
863 918 2.897350 CCCGATTTCTCCAGCGCC 60.897 66.667 2.29 0.00 0.00 6.53
864 919 2.897350 CCGATTTCTCCAGCGCCC 60.897 66.667 2.29 0.00 0.00 6.13
865 920 2.897350 CGATTTCTCCAGCGCCCC 60.897 66.667 2.29 0.00 0.00 5.80
866 921 2.592308 GATTTCTCCAGCGCCCCT 59.408 61.111 2.29 0.00 0.00 4.79
867 922 1.077429 GATTTCTCCAGCGCCCCTT 60.077 57.895 2.29 0.00 0.00 3.95
868 923 0.681243 GATTTCTCCAGCGCCCCTTT 60.681 55.000 2.29 0.00 0.00 3.11
869 924 0.681243 ATTTCTCCAGCGCCCCTTTC 60.681 55.000 2.29 0.00 0.00 2.62
891 946 2.139917 CTTCGGTGGATTTCGTTGTGA 58.860 47.619 0.00 0.00 0.00 3.58
901 956 3.902063 CGTTGTGATCTCCGCGCG 61.902 66.667 25.67 25.67 0.00 6.86
921 986 3.810373 CGTAGCTTGCTTCGATTTGTTT 58.190 40.909 14.76 0.00 0.00 2.83
922 987 3.840763 CGTAGCTTGCTTCGATTTGTTTC 59.159 43.478 14.76 0.00 0.00 2.78
929 994 4.472286 TGCTTCGATTTGTTTCGGATTTC 58.528 39.130 0.00 0.00 39.56 2.17
931 996 5.095490 GCTTCGATTTGTTTCGGATTTCAT 58.905 37.500 0.00 0.00 39.56 2.57
936 1001 5.391950 CGATTTGTTTCGGATTTCATCTGGT 60.392 40.000 0.00 0.00 36.31 4.00
963 1028 1.066303 GACGGATCTGACGCAGAATCT 59.934 52.381 9.00 0.00 44.04 2.40
974 1039 1.576356 GCAGAATCTCGGCTCGATTT 58.424 50.000 0.00 0.00 34.72 2.17
975 1040 1.936547 GCAGAATCTCGGCTCGATTTT 59.063 47.619 0.00 0.00 34.72 1.82
1164 1229 2.089980 GTCTACTACAACGAGGCCTCA 58.910 52.381 31.67 11.56 0.00 3.86
1431 1520 2.343758 GAGTCGCTCCAGTTGCCA 59.656 61.111 0.00 0.00 0.00 4.92
1432 1521 1.301716 GAGTCGCTCCAGTTGCCAA 60.302 57.895 0.00 0.00 0.00 4.52
1433 1522 0.674895 GAGTCGCTCCAGTTGCCAAT 60.675 55.000 0.00 0.00 0.00 3.16
1797 1953 8.807948 ACATCAAGTTATATTACCTGCTTGTT 57.192 30.769 0.00 0.00 35.96 2.83
1919 2117 7.433708 TGTCATATTGTGGTAGTTCTGTTTG 57.566 36.000 0.00 0.00 0.00 2.93
1980 2178 1.160137 CAGCAACCTGTCCTAACTGC 58.840 55.000 0.00 0.00 34.31 4.40
1987 2185 2.906389 ACCTGTCCTAACTGCTTGATGA 59.094 45.455 0.00 0.00 0.00 2.92
2027 2248 4.645136 CACCTGACAGCCATCTAAGTAGTA 59.355 45.833 0.00 0.00 0.00 1.82
2063 2285 4.844267 ACGTTGAAGAAGTTCATTTTCCG 58.156 39.130 5.50 3.65 42.41 4.30
2108 2331 9.491675 TTTTATTTTGGTCGTATGAACTGACTA 57.508 29.630 0.86 0.00 32.95 2.59
2154 2378 2.215942 ACCAACTTATCCCAACTGGC 57.784 50.000 0.00 0.00 0.00 4.85
2176 2400 1.133790 GATGCCATGTTGGAAGCTGAC 59.866 52.381 0.00 0.00 40.96 3.51
2194 2418 4.216257 GCTGACTTTGTTTTATCTGCTGGA 59.784 41.667 0.00 0.00 34.33 3.86
2258 2482 1.208614 CTTGTTTGAGCGCTGAGGC 59.791 57.895 18.48 3.30 0.00 4.70
2372 2597 6.932356 AACTGATAAATGCTGGTAGATGTG 57.068 37.500 0.00 0.00 0.00 3.21
2379 2604 1.908619 TGCTGGTAGATGTGGTGTGAT 59.091 47.619 0.00 0.00 0.00 3.06
2515 2740 4.080299 GGACCCTGATTCCACTTGATAAGT 60.080 45.833 0.00 0.00 44.06 2.24
2536 2761 7.941431 AAGTCTATATATGTTACTCCCTCCG 57.059 40.000 0.00 0.00 0.00 4.63
2537 2762 7.030234 AGTCTATATATGTTACTCCCTCCGT 57.970 40.000 0.00 0.00 0.00 4.69
2538 2763 7.468496 AGTCTATATATGTTACTCCCTCCGTT 58.532 38.462 0.00 0.00 0.00 4.44
2539 2764 7.611079 AGTCTATATATGTTACTCCCTCCGTTC 59.389 40.741 0.00 0.00 0.00 3.95
2540 2765 5.997384 ATATATGTTACTCCCTCCGTTCC 57.003 43.478 0.00 0.00 0.00 3.62
2541 2766 1.946984 ATGTTACTCCCTCCGTTCCA 58.053 50.000 0.00 0.00 0.00 3.53
2542 2767 1.719529 TGTTACTCCCTCCGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
2543 2768 2.048601 TGTTACTCCCTCCGTTCCAAA 58.951 47.619 0.00 0.00 0.00 3.28
2544 2769 2.640826 TGTTACTCCCTCCGTTCCAAAT 59.359 45.455 0.00 0.00 0.00 2.32
2545 2770 3.073356 TGTTACTCCCTCCGTTCCAAATT 59.927 43.478 0.00 0.00 0.00 1.82
2546 2771 4.286549 TGTTACTCCCTCCGTTCCAAATTA 59.713 41.667 0.00 0.00 0.00 1.40
2547 2772 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2548 2773 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2549 2774 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
2550 2775 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
2551 2776 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
2552 2777 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
2553 2778 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
2554 2779 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
2555 2780 3.190327 TCCGTTCCAAATTACTCGTCGTA 59.810 43.478 0.00 0.00 0.00 3.43
2556 2781 3.545078 CCGTTCCAAATTACTCGTCGTAG 59.455 47.826 0.00 0.00 0.00 3.51
2557 2782 4.406069 CGTTCCAAATTACTCGTCGTAGA 58.594 43.478 0.00 0.00 0.00 2.59
2558 2783 4.853196 CGTTCCAAATTACTCGTCGTAGAA 59.147 41.667 0.00 0.00 39.69 2.10
2559 2784 5.343058 CGTTCCAAATTACTCGTCGTAGAAA 59.657 40.000 0.00 0.00 39.69 2.52
2560 2785 6.034256 CGTTCCAAATTACTCGTCGTAGAAAT 59.966 38.462 0.00 0.00 39.69 2.17
2561 2786 7.389479 GTTCCAAATTACTCGTCGTAGAAATC 58.611 38.462 0.00 0.00 39.69 2.17
2562 2787 6.623486 TCCAAATTACTCGTCGTAGAAATCA 58.377 36.000 0.00 0.00 39.69 2.57
2563 2788 7.092079 TCCAAATTACTCGTCGTAGAAATCAA 58.908 34.615 0.00 0.00 39.69 2.57
2564 2789 7.762615 TCCAAATTACTCGTCGTAGAAATCAAT 59.237 33.333 0.00 0.00 39.69 2.57
2565 2790 7.846107 CCAAATTACTCGTCGTAGAAATCAATG 59.154 37.037 0.00 0.00 39.69 2.82
2566 2791 8.380644 CAAATTACTCGTCGTAGAAATCAATGT 58.619 33.333 0.00 0.00 39.69 2.71
2567 2792 9.577110 AAATTACTCGTCGTAGAAATCAATGTA 57.423 29.630 0.00 0.00 39.69 2.29
2568 2793 7.959718 TTACTCGTCGTAGAAATCAATGTAC 57.040 36.000 0.00 0.00 39.69 2.90
2569 2794 5.338365 ACTCGTCGTAGAAATCAATGTACC 58.662 41.667 0.00 0.00 39.69 3.34
2570 2795 5.125097 ACTCGTCGTAGAAATCAATGTACCT 59.875 40.000 0.00 0.00 39.69 3.08
2571 2796 6.317140 ACTCGTCGTAGAAATCAATGTACCTA 59.683 38.462 0.00 0.00 39.69 3.08
2572 2797 6.722301 TCGTCGTAGAAATCAATGTACCTAG 58.278 40.000 0.00 0.00 39.69 3.02
2573 2798 6.539826 TCGTCGTAGAAATCAATGTACCTAGA 59.460 38.462 0.00 0.00 39.69 2.43
2574 2799 7.066163 TCGTCGTAGAAATCAATGTACCTAGAA 59.934 37.037 0.00 0.00 39.69 2.10
2575 2800 7.165483 CGTCGTAGAAATCAATGTACCTAGAAC 59.835 40.741 0.00 0.00 39.69 3.01
2576 2801 8.189460 GTCGTAGAAATCAATGTACCTAGAACT 58.811 37.037 0.00 0.00 39.69 3.01
2577 2802 9.399797 TCGTAGAAATCAATGTACCTAGAACTA 57.600 33.333 0.00 0.00 0.00 2.24
2606 2831 7.043961 ACATCTATATACATCCATACCTGCG 57.956 40.000 0.00 0.00 0.00 5.18
2607 2832 6.833933 ACATCTATATACATCCATACCTGCGA 59.166 38.462 0.00 0.00 0.00 5.10
2608 2833 6.694877 TCTATATACATCCATACCTGCGAC 57.305 41.667 0.00 0.00 0.00 5.19
2609 2834 6.184789 TCTATATACATCCATACCTGCGACA 58.815 40.000 0.00 0.00 0.00 4.35
2610 2835 5.738619 ATATACATCCATACCTGCGACAA 57.261 39.130 0.00 0.00 0.00 3.18
2611 2836 2.315925 ACATCCATACCTGCGACAAG 57.684 50.000 0.00 0.00 0.00 3.16
2612 2837 1.555075 ACATCCATACCTGCGACAAGT 59.445 47.619 0.00 0.00 0.00 3.16
2613 2838 2.764010 ACATCCATACCTGCGACAAGTA 59.236 45.455 0.00 0.00 0.00 2.24
2614 2839 3.196901 ACATCCATACCTGCGACAAGTAA 59.803 43.478 0.00 0.00 0.00 2.24
2615 2840 4.141711 ACATCCATACCTGCGACAAGTAAT 60.142 41.667 0.00 0.00 0.00 1.89
2616 2841 4.481368 TCCATACCTGCGACAAGTAATT 57.519 40.909 0.00 0.00 0.00 1.40
2617 2842 4.439057 TCCATACCTGCGACAAGTAATTC 58.561 43.478 0.00 0.00 0.00 2.17
2618 2843 3.245284 CCATACCTGCGACAAGTAATTCG 59.755 47.826 0.00 0.00 38.31 3.34
2619 2844 1.722011 ACCTGCGACAAGTAATTCGG 58.278 50.000 0.00 0.00 35.73 4.30
2620 2845 1.274167 ACCTGCGACAAGTAATTCGGA 59.726 47.619 0.00 0.00 35.73 4.55
2621 2846 2.289195 ACCTGCGACAAGTAATTCGGAA 60.289 45.455 0.00 0.00 35.02 4.30
2622 2847 2.093783 CCTGCGACAAGTAATTCGGAAC 59.906 50.000 0.00 0.00 35.02 3.62
2684 3014 8.992073 GTGCATTTTCTTTGAATATTTTCCTGT 58.008 29.630 0.00 0.00 0.00 4.00
2891 3222 1.294780 CTCAGACCTCCGCAAGCTT 59.705 57.895 0.00 0.00 0.00 3.74
3732 4066 7.864379 CAGTAGAATGCTTTGAAGTTTGAACAT 59.136 33.333 0.00 0.00 0.00 2.71
3762 4098 0.320683 TCTGCATGTTGTCCTGTCCG 60.321 55.000 0.00 0.00 0.00 4.79
3763 4099 0.603707 CTGCATGTTGTCCTGTCCGT 60.604 55.000 0.00 0.00 0.00 4.69
3769 4105 1.068417 TTGTCCTGTCCGTGGTTCG 59.932 57.895 0.00 0.00 39.52 3.95
3770 4106 1.678598 TTGTCCTGTCCGTGGTTCGT 61.679 55.000 0.00 0.00 37.94 3.85
3775 4111 1.508632 CTGTCCGTGGTTCGTTTCAT 58.491 50.000 0.00 0.00 37.94 2.57
3779 4115 1.341852 TCCGTGGTTCGTTTCATCTGA 59.658 47.619 0.00 0.00 37.94 3.27
3796 4132 9.467258 TTTCATCTGAATTGAAATTTCAGTGTC 57.533 29.630 19.64 17.25 37.97 3.67
3803 4139 9.288576 TGAATTGAAATTTCAGTGTCACTCTAT 57.711 29.630 19.64 5.12 38.61 1.98
3813 4149 0.926846 GTCACTCTATTCGCTGCAGC 59.073 55.000 29.12 29.12 37.78 5.25
3819 4155 1.066929 TCTATTCGCTGCAGCACTTGA 60.067 47.619 36.03 22.89 42.21 3.02
3823 4159 0.737804 TCGCTGCAGCACTTGAAAAA 59.262 45.000 36.03 8.35 42.21 1.94
3844 4180 5.835113 AACCCGGATTTGTGAGAAATATG 57.165 39.130 0.73 0.00 0.00 1.78
3849 4185 5.590259 CCGGATTTGTGAGAAATATGAAGGT 59.410 40.000 0.00 0.00 0.00 3.50
3850 4186 6.765989 CCGGATTTGTGAGAAATATGAAGGTA 59.234 38.462 0.00 0.00 0.00 3.08
3851 4187 7.282224 CCGGATTTGTGAGAAATATGAAGGTAA 59.718 37.037 0.00 0.00 0.00 2.85
3852 4188 8.673711 CGGATTTGTGAGAAATATGAAGGTAAA 58.326 33.333 0.00 0.00 0.00 2.01
3862 4198 7.993183 AGAAATATGAAGGTAAATGTGACGGAT 59.007 33.333 0.00 0.00 0.00 4.18
3867 4203 1.670811 GGTAAATGTGACGGATGCAGG 59.329 52.381 0.00 0.00 0.00 4.85
3876 4212 1.479323 GACGGATGCAGGTTGTAGGTA 59.521 52.381 0.00 0.00 0.00 3.08
3877 4213 2.102588 GACGGATGCAGGTTGTAGGTAT 59.897 50.000 0.00 0.00 0.00 2.73
3879 4215 3.069158 ACGGATGCAGGTTGTAGGTATAC 59.931 47.826 0.00 0.00 0.00 1.47
3880 4216 3.069016 CGGATGCAGGTTGTAGGTATACA 59.931 47.826 5.01 0.00 40.18 2.29
3881 4217 4.262463 CGGATGCAGGTTGTAGGTATACAT 60.262 45.833 5.01 0.00 41.49 2.29
3882 4218 5.238583 GGATGCAGGTTGTAGGTATACATC 58.761 45.833 5.01 0.00 41.49 3.06
3883 4219 4.316205 TGCAGGTTGTAGGTATACATCG 57.684 45.455 5.01 0.00 41.49 3.84
3884 4220 3.702548 TGCAGGTTGTAGGTATACATCGT 59.297 43.478 5.01 0.00 41.49 3.73
3885 4221 4.160814 TGCAGGTTGTAGGTATACATCGTT 59.839 41.667 5.01 0.00 41.49 3.85
3886 4222 5.114081 GCAGGTTGTAGGTATACATCGTTT 58.886 41.667 5.01 0.00 41.49 3.60
3887 4223 5.583457 GCAGGTTGTAGGTATACATCGTTTT 59.417 40.000 5.01 0.00 41.49 2.43
3888 4224 6.093082 GCAGGTTGTAGGTATACATCGTTTTT 59.907 38.462 5.01 0.00 41.49 1.94
3918 4254 0.482006 GGGGTATACTCCCTCCGTCT 59.518 60.000 11.10 0.00 46.27 4.18
3921 4257 1.144503 GGTATACTCCCTCCGTCTGGA 59.855 57.143 2.25 0.00 43.88 3.86
3957 4293 6.527957 GCGCGTTAGTTCAACTCTAATTTTA 58.472 36.000 8.43 0.00 34.77 1.52
4024 4367 0.544223 GCTTCTTCCTCCTTCCTCCC 59.456 60.000 0.00 0.00 0.00 4.30
4027 4370 0.116541 TCTTCCTCCTTCCTCCCGTT 59.883 55.000 0.00 0.00 0.00 4.44
4319 4699 4.039092 GGCTGCTCCTCCAAGGCA 62.039 66.667 0.00 0.00 34.61 4.75
4468 4885 2.925706 TGGCGGGACCTGTTGCTA 60.926 61.111 1.33 0.00 40.22 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.822164 GAATCAGGCAGGCAAGCAAT 59.178 50.000 0.00 0.00 35.83 3.56
2 3 1.588824 CGAATCAGGCAGGCAAGCAA 61.589 55.000 0.00 0.00 35.83 3.91
3 4 2.042259 CGAATCAGGCAGGCAAGCA 61.042 57.895 0.00 0.00 35.83 3.91
4 5 1.589716 AACGAATCAGGCAGGCAAGC 61.590 55.000 0.00 0.00 0.00 4.01
5 6 0.883833 AAACGAATCAGGCAGGCAAG 59.116 50.000 0.00 0.00 0.00 4.01
6 7 0.597568 CAAACGAATCAGGCAGGCAA 59.402 50.000 0.00 0.00 0.00 4.52
7 8 0.250684 TCAAACGAATCAGGCAGGCA 60.251 50.000 0.00 0.00 0.00 4.75
8 9 0.169009 GTCAAACGAATCAGGCAGGC 59.831 55.000 0.00 0.00 0.00 4.85
9 10 1.813513 AGTCAAACGAATCAGGCAGG 58.186 50.000 0.00 0.00 0.00 4.85
10 11 2.807967 TGAAGTCAAACGAATCAGGCAG 59.192 45.455 0.00 0.00 0.00 4.85
11 12 2.844946 TGAAGTCAAACGAATCAGGCA 58.155 42.857 0.00 0.00 0.00 4.75
12 13 3.484229 CGATGAAGTCAAACGAATCAGGC 60.484 47.826 0.00 0.00 33.85 4.85
13 14 3.679980 ACGATGAAGTCAAACGAATCAGG 59.320 43.478 14.76 0.00 35.18 3.86
14 15 4.150627 ACACGATGAAGTCAAACGAATCAG 59.849 41.667 14.76 5.36 35.18 2.90
15 16 4.055360 ACACGATGAAGTCAAACGAATCA 58.945 39.130 14.76 0.00 35.18 2.57
16 17 4.149922 TCACACGATGAAGTCAAACGAATC 59.850 41.667 14.76 0.00 33.02 2.52
17 18 4.055360 TCACACGATGAAGTCAAACGAAT 58.945 39.130 14.76 3.64 33.02 3.34
18 19 3.449632 TCACACGATGAAGTCAAACGAA 58.550 40.909 14.76 0.42 33.02 3.85
19 20 3.086818 TCACACGATGAAGTCAAACGA 57.913 42.857 14.76 0.00 33.02 3.85
20 21 3.852471 TTCACACGATGAAGTCAAACG 57.148 42.857 0.00 8.83 42.62 3.60
28 29 5.177511 CAGCTAAAAGTCTTCACACGATGAA 59.822 40.000 6.68 6.68 45.39 2.57
29 30 4.686091 CAGCTAAAAGTCTTCACACGATGA 59.314 41.667 0.00 0.00 34.65 2.92
30 31 4.449068 ACAGCTAAAAGTCTTCACACGATG 59.551 41.667 0.00 0.00 0.00 3.84
31 32 4.632153 ACAGCTAAAAGTCTTCACACGAT 58.368 39.130 0.00 0.00 0.00 3.73
32 33 4.054780 ACAGCTAAAAGTCTTCACACGA 57.945 40.909 0.00 0.00 0.00 4.35
33 34 4.795970 AACAGCTAAAAGTCTTCACACG 57.204 40.909 0.00 0.00 0.00 4.49
34 35 6.017852 AGCTAAACAGCTAAAAGTCTTCACAC 60.018 38.462 0.00 0.00 44.28 3.82
35 36 6.055588 AGCTAAACAGCTAAAAGTCTTCACA 58.944 36.000 0.00 0.00 44.28 3.58
36 37 6.546972 AGCTAAACAGCTAAAAGTCTTCAC 57.453 37.500 0.00 0.00 44.28 3.18
37 38 6.765989 TGAAGCTAAACAGCTAAAAGTCTTCA 59.234 34.615 11.24 11.24 45.54 3.02
38 39 7.190920 TGAAGCTAAACAGCTAAAAGTCTTC 57.809 36.000 0.00 0.00 45.54 2.87
39 40 7.751768 ATGAAGCTAAACAGCTAAAAGTCTT 57.248 32.000 0.00 0.00 45.54 3.01
40 41 9.454859 AATATGAAGCTAAACAGCTAAAAGTCT 57.545 29.630 0.00 0.00 45.54 3.24
47 48 9.712305 GGAAGATAATATGAAGCTAAACAGCTA 57.288 33.333 0.00 0.00 45.54 3.32
49 50 8.383318 TGGAAGATAATATGAAGCTAAACAGC 57.617 34.615 0.00 0.00 0.00 4.40
57 58 9.323985 GGATCAGTATGGAAGATAATATGAAGC 57.676 37.037 0.00 0.00 36.16 3.86
60 61 9.552695 ACAGGATCAGTATGGAAGATAATATGA 57.447 33.333 0.00 0.00 36.16 2.15
61 62 9.814899 GACAGGATCAGTATGGAAGATAATATG 57.185 37.037 0.00 0.00 36.16 1.78
62 63 9.781425 AGACAGGATCAGTATGGAAGATAATAT 57.219 33.333 0.00 0.00 36.16 1.28
64 65 9.030452 GTAGACAGGATCAGTATGGAAGATAAT 57.970 37.037 0.00 0.00 36.16 1.28
65 66 7.451877 GGTAGACAGGATCAGTATGGAAGATAA 59.548 40.741 0.00 0.00 36.16 1.75
66 67 6.948886 GGTAGACAGGATCAGTATGGAAGATA 59.051 42.308 0.00 0.00 36.16 1.98
67 68 5.777732 GGTAGACAGGATCAGTATGGAAGAT 59.222 44.000 0.00 0.00 36.16 2.40
68 69 5.103473 AGGTAGACAGGATCAGTATGGAAGA 60.103 44.000 0.00 0.00 36.16 2.87
69 70 5.144100 AGGTAGACAGGATCAGTATGGAAG 58.856 45.833 0.00 0.00 36.16 3.46
70 71 5.144159 AGGTAGACAGGATCAGTATGGAA 57.856 43.478 0.00 0.00 36.16 3.53
71 72 4.816048 AGGTAGACAGGATCAGTATGGA 57.184 45.455 0.00 0.00 36.16 3.41
72 73 5.636123 ACTAGGTAGACAGGATCAGTATGG 58.364 45.833 0.00 0.00 36.16 2.74
73 74 6.515862 GCAACTAGGTAGACAGGATCAGTATG 60.516 46.154 0.00 0.00 37.54 2.39
74 75 5.536916 GCAACTAGGTAGACAGGATCAGTAT 59.463 44.000 0.00 0.00 0.00 2.12
75 76 4.888239 GCAACTAGGTAGACAGGATCAGTA 59.112 45.833 0.00 0.00 0.00 2.74
76 77 3.702045 GCAACTAGGTAGACAGGATCAGT 59.298 47.826 0.00 0.00 0.00 3.41
77 78 3.701542 TGCAACTAGGTAGACAGGATCAG 59.298 47.826 0.00 0.00 0.00 2.90
78 79 3.701542 CTGCAACTAGGTAGACAGGATCA 59.298 47.826 0.00 0.00 0.00 2.92
79 80 3.702045 ACTGCAACTAGGTAGACAGGATC 59.298 47.826 8.89 0.00 31.51 3.36
80 81 3.714144 ACTGCAACTAGGTAGACAGGAT 58.286 45.455 8.89 0.00 31.51 3.24
81 82 3.170991 ACTGCAACTAGGTAGACAGGA 57.829 47.619 8.89 0.00 31.51 3.86
82 83 3.963428 AACTGCAACTAGGTAGACAGG 57.037 47.619 8.89 0.00 31.51 4.00
83 84 5.416326 AGACTAACTGCAACTAGGTAGACAG 59.584 44.000 4.97 0.00 39.78 3.51
84 85 5.322754 AGACTAACTGCAACTAGGTAGACA 58.677 41.667 4.97 0.00 39.78 3.41
85 86 5.900865 AGACTAACTGCAACTAGGTAGAC 57.099 43.478 4.97 0.00 39.78 2.59
86 87 6.008331 TGAAGACTAACTGCAACTAGGTAGA 58.992 40.000 4.97 0.00 39.78 2.59
87 88 6.268825 TGAAGACTAACTGCAACTAGGTAG 57.731 41.667 0.00 0.00 42.43 3.18
88 89 6.631016 CATGAAGACTAACTGCAACTAGGTA 58.369 40.000 0.00 0.00 37.74 3.08
89 90 5.482908 CATGAAGACTAACTGCAACTAGGT 58.517 41.667 0.00 0.00 37.74 3.08
90 91 4.331168 GCATGAAGACTAACTGCAACTAGG 59.669 45.833 0.00 0.00 37.74 3.02
91 92 4.331168 GGCATGAAGACTAACTGCAACTAG 59.669 45.833 0.00 0.00 37.74 2.57
92 93 4.020218 AGGCATGAAGACTAACTGCAACTA 60.020 41.667 0.00 0.00 37.74 2.24
93 94 3.077359 GGCATGAAGACTAACTGCAACT 58.923 45.455 0.00 0.00 37.74 3.16
94 95 3.077359 AGGCATGAAGACTAACTGCAAC 58.923 45.455 0.00 0.00 37.74 4.17
95 96 3.423539 AGGCATGAAGACTAACTGCAA 57.576 42.857 0.00 0.00 37.74 4.08
96 97 3.423539 AAGGCATGAAGACTAACTGCA 57.576 42.857 0.00 0.00 38.70 4.41
97 98 3.753272 TGAAAGGCATGAAGACTAACTGC 59.247 43.478 0.00 0.00 30.53 4.40
110 111 6.321945 TCAAGCATACAATACATGAAAGGCAT 59.678 34.615 0.00 0.00 37.85 4.40
111 112 5.651576 TCAAGCATACAATACATGAAAGGCA 59.348 36.000 0.00 0.00 31.11 4.75
112 113 5.973565 GTCAAGCATACAATACATGAAAGGC 59.026 40.000 0.00 0.00 0.00 4.35
113 114 7.325660 AGTCAAGCATACAATACATGAAAGG 57.674 36.000 0.00 0.00 0.00 3.11
116 117 8.344831 GCATTAGTCAAGCATACAATACATGAA 58.655 33.333 0.00 0.00 0.00 2.57
117 118 7.716560 AGCATTAGTCAAGCATACAATACATGA 59.283 33.333 0.00 0.00 0.00 3.07
118 119 7.868775 AGCATTAGTCAAGCATACAATACATG 58.131 34.615 0.00 0.00 0.00 3.21
119 120 7.095481 CGAGCATTAGTCAAGCATACAATACAT 60.095 37.037 0.00 0.00 0.00 2.29
120 121 6.200854 CGAGCATTAGTCAAGCATACAATACA 59.799 38.462 0.00 0.00 0.00 2.29
121 122 6.584954 CGAGCATTAGTCAAGCATACAATAC 58.415 40.000 0.00 0.00 0.00 1.89
122 123 5.177511 GCGAGCATTAGTCAAGCATACAATA 59.822 40.000 0.00 0.00 0.00 1.90
123 124 4.024556 GCGAGCATTAGTCAAGCATACAAT 60.025 41.667 0.00 0.00 0.00 2.71
124 125 3.309682 GCGAGCATTAGTCAAGCATACAA 59.690 43.478 0.00 0.00 0.00 2.41
125 126 2.866156 GCGAGCATTAGTCAAGCATACA 59.134 45.455 0.00 0.00 0.00 2.29
126 127 2.221981 GGCGAGCATTAGTCAAGCATAC 59.778 50.000 0.00 0.00 0.00 2.39
127 128 2.103094 AGGCGAGCATTAGTCAAGCATA 59.897 45.455 0.00 0.00 0.00 3.14
128 129 1.134280 AGGCGAGCATTAGTCAAGCAT 60.134 47.619 0.00 0.00 0.00 3.79
129 130 0.250234 AGGCGAGCATTAGTCAAGCA 59.750 50.000 0.00 0.00 0.00 3.91
130 131 2.131183 CTAGGCGAGCATTAGTCAAGC 58.869 52.381 0.00 0.00 0.00 4.01
131 132 3.119291 CACTAGGCGAGCATTAGTCAAG 58.881 50.000 8.04 0.00 0.00 3.02
132 133 2.496070 ACACTAGGCGAGCATTAGTCAA 59.504 45.455 8.04 0.00 0.00 3.18
133 134 2.100197 ACACTAGGCGAGCATTAGTCA 58.900 47.619 8.04 0.00 0.00 3.41
134 135 2.873133 ACACTAGGCGAGCATTAGTC 57.127 50.000 8.04 0.00 0.00 2.59
135 136 3.288964 ACTACACTAGGCGAGCATTAGT 58.711 45.455 0.00 1.88 0.00 2.24
136 137 3.992260 ACTACACTAGGCGAGCATTAG 57.008 47.619 0.00 1.26 0.00 1.73
137 138 4.730949 AAACTACACTAGGCGAGCATTA 57.269 40.909 0.00 0.00 0.00 1.90
138 139 3.611766 AAACTACACTAGGCGAGCATT 57.388 42.857 0.00 0.00 0.00 3.56
139 140 3.056107 TGAAAACTACACTAGGCGAGCAT 60.056 43.478 0.00 0.00 0.00 3.79
140 141 2.297880 TGAAAACTACACTAGGCGAGCA 59.702 45.455 0.00 0.00 0.00 4.26
141 142 2.955614 TGAAAACTACACTAGGCGAGC 58.044 47.619 0.00 0.00 0.00 5.03
142 143 4.567159 GGAATGAAAACTACACTAGGCGAG 59.433 45.833 0.00 0.00 0.00 5.03
143 144 4.501071 GGAATGAAAACTACACTAGGCGA 58.499 43.478 0.00 0.00 0.00 5.54
144 145 3.306166 CGGAATGAAAACTACACTAGGCG 59.694 47.826 0.00 0.00 0.00 5.52
145 146 3.063588 GCGGAATGAAAACTACACTAGGC 59.936 47.826 0.00 0.00 0.00 3.93
146 147 4.330074 CAGCGGAATGAAAACTACACTAGG 59.670 45.833 0.00 0.00 0.00 3.02
147 148 4.201724 GCAGCGGAATGAAAACTACACTAG 60.202 45.833 0.00 0.00 0.00 2.57
148 149 3.682858 GCAGCGGAATGAAAACTACACTA 59.317 43.478 0.00 0.00 0.00 2.74
149 150 2.484264 GCAGCGGAATGAAAACTACACT 59.516 45.455 0.00 0.00 0.00 3.55
150 151 2.484264 AGCAGCGGAATGAAAACTACAC 59.516 45.455 0.00 0.00 0.00 2.90
151 152 2.778299 AGCAGCGGAATGAAAACTACA 58.222 42.857 0.00 0.00 0.00 2.74
152 153 3.831715 AAGCAGCGGAATGAAAACTAC 57.168 42.857 0.00 0.00 0.00 2.73
153 154 4.575885 AGTAAGCAGCGGAATGAAAACTA 58.424 39.130 0.00 0.00 0.00 2.24
154 155 3.412386 AGTAAGCAGCGGAATGAAAACT 58.588 40.909 0.00 0.00 0.00 2.66
155 156 3.831715 AGTAAGCAGCGGAATGAAAAC 57.168 42.857 0.00 0.00 0.00 2.43
156 157 8.935844 CATATATAGTAAGCAGCGGAATGAAAA 58.064 33.333 0.00 0.00 0.00 2.29
157 158 7.064609 GCATATATAGTAAGCAGCGGAATGAAA 59.935 37.037 0.00 0.00 0.00 2.69
158 159 6.535150 GCATATATAGTAAGCAGCGGAATGAA 59.465 38.462 0.00 0.00 0.00 2.57
159 160 6.042777 GCATATATAGTAAGCAGCGGAATGA 58.957 40.000 0.00 0.00 0.00 2.57
160 161 6.045318 AGCATATATAGTAAGCAGCGGAATG 58.955 40.000 0.00 0.00 0.00 2.67
161 162 6.127338 TGAGCATATATAGTAAGCAGCGGAAT 60.127 38.462 0.00 0.00 0.00 3.01
162 163 5.185056 TGAGCATATATAGTAAGCAGCGGAA 59.815 40.000 0.00 0.00 0.00 4.30
163 164 4.705023 TGAGCATATATAGTAAGCAGCGGA 59.295 41.667 0.00 0.00 0.00 5.54
164 165 4.998788 TGAGCATATATAGTAAGCAGCGG 58.001 43.478 0.00 0.00 0.00 5.52
165 166 5.645624 ACTGAGCATATATAGTAAGCAGCG 58.354 41.667 0.00 0.00 0.00 5.18
166 167 7.897575 AAACTGAGCATATATAGTAAGCAGC 57.102 36.000 0.00 0.00 0.00 5.25
167 168 9.360093 GGTAAACTGAGCATATATAGTAAGCAG 57.640 37.037 0.00 0.00 0.00 4.24
168 169 9.090103 AGGTAAACTGAGCATATATAGTAAGCA 57.910 33.333 0.00 0.00 0.00 3.91
186 187 5.652452 AGCTTTGAAGACAAACAGGTAAACT 59.348 36.000 0.00 0.00 40.47 2.66
187 188 5.891451 AGCTTTGAAGACAAACAGGTAAAC 58.109 37.500 0.00 0.00 40.47 2.01
188 189 6.038936 GGTAGCTTTGAAGACAAACAGGTAAA 59.961 38.462 0.00 0.00 40.47 2.01
189 190 5.529800 GGTAGCTTTGAAGACAAACAGGTAA 59.470 40.000 0.00 0.00 40.47 2.85
190 191 5.061179 GGTAGCTTTGAAGACAAACAGGTA 58.939 41.667 0.00 0.00 40.47 3.08
191 192 3.883489 GGTAGCTTTGAAGACAAACAGGT 59.117 43.478 0.00 0.00 40.47 4.00
192 193 3.058914 CGGTAGCTTTGAAGACAAACAGG 60.059 47.826 0.00 0.00 40.47 4.00
193 194 3.560068 ACGGTAGCTTTGAAGACAAACAG 59.440 43.478 0.00 0.00 40.47 3.16
194 195 3.311322 CACGGTAGCTTTGAAGACAAACA 59.689 43.478 0.00 0.00 40.47 2.83
195 196 3.311596 ACACGGTAGCTTTGAAGACAAAC 59.688 43.478 0.00 0.00 40.47 2.93
196 197 3.537580 ACACGGTAGCTTTGAAGACAAA 58.462 40.909 0.00 0.00 42.66 2.83
197 198 3.188159 ACACGGTAGCTTTGAAGACAA 57.812 42.857 0.00 0.00 0.00 3.18
198 199 2.902705 ACACGGTAGCTTTGAAGACA 57.097 45.000 0.00 0.00 0.00 3.41
199 200 4.547406 AAAACACGGTAGCTTTGAAGAC 57.453 40.909 0.00 0.00 0.00 3.01
200 201 6.680874 TTTAAAACACGGTAGCTTTGAAGA 57.319 33.333 0.00 0.00 0.00 2.87
201 202 8.287503 AGTATTTAAAACACGGTAGCTTTGAAG 58.712 33.333 0.00 0.00 0.00 3.02
202 203 8.156994 AGTATTTAAAACACGGTAGCTTTGAA 57.843 30.769 0.00 0.00 0.00 2.69
203 204 7.733402 AGTATTTAAAACACGGTAGCTTTGA 57.267 32.000 0.00 0.00 0.00 2.69
204 205 8.791355 AAAGTATTTAAAACACGGTAGCTTTG 57.209 30.769 0.00 0.00 35.86 2.77
234 235 5.506708 AGAGGGTTATGAATAGGCGTTTTT 58.493 37.500 0.00 0.00 0.00 1.94
235 236 5.112129 AGAGGGTTATGAATAGGCGTTTT 57.888 39.130 0.00 0.00 0.00 2.43
236 237 4.772886 AGAGGGTTATGAATAGGCGTTT 57.227 40.909 0.00 0.00 0.00 3.60
237 238 4.900054 ACTAGAGGGTTATGAATAGGCGTT 59.100 41.667 0.00 0.00 0.00 4.84
238 239 4.481072 ACTAGAGGGTTATGAATAGGCGT 58.519 43.478 0.00 0.00 0.00 5.68
239 240 5.010719 TCAACTAGAGGGTTATGAATAGGCG 59.989 44.000 0.00 0.00 0.00 5.52
240 241 6.420913 TCAACTAGAGGGTTATGAATAGGC 57.579 41.667 0.00 0.00 0.00 3.93
241 242 9.930693 GTTATCAACTAGAGGGTTATGAATAGG 57.069 37.037 0.00 0.00 0.00 2.57
257 258 7.027760 CGAGTGAAAGTGCTAGTTATCAACTA 58.972 38.462 0.00 0.00 42.81 2.24
258 259 5.864474 CGAGTGAAAGTGCTAGTTATCAACT 59.136 40.000 0.00 0.00 45.40 3.16
259 260 5.634020 ACGAGTGAAAGTGCTAGTTATCAAC 59.366 40.000 0.00 0.00 0.00 3.18
260 261 5.633601 CACGAGTGAAAGTGCTAGTTATCAA 59.366 40.000 0.00 0.00 0.00 2.57
261 262 5.048294 TCACGAGTGAAAGTGCTAGTTATCA 60.048 40.000 3.11 0.00 38.19 2.15
262 263 5.399858 TCACGAGTGAAAGTGCTAGTTATC 58.600 41.667 3.11 0.00 38.19 1.75
263 264 5.386958 TCACGAGTGAAAGTGCTAGTTAT 57.613 39.130 3.11 0.00 38.19 1.89
264 265 4.841443 TCACGAGTGAAAGTGCTAGTTA 57.159 40.909 3.11 0.00 38.19 2.24
265 266 3.728076 TCACGAGTGAAAGTGCTAGTT 57.272 42.857 3.11 0.00 38.19 2.24
266 267 3.944055 ATCACGAGTGAAAGTGCTAGT 57.056 42.857 10.15 0.00 43.58 2.57
267 268 7.043325 GGTTATAATCACGAGTGAAAGTGCTAG 60.043 40.741 10.15 0.00 43.58 3.42
268 269 6.755141 GGTTATAATCACGAGTGAAAGTGCTA 59.245 38.462 10.15 0.00 43.58 3.49
269 270 5.581085 GGTTATAATCACGAGTGAAAGTGCT 59.419 40.000 10.15 0.00 43.58 4.40
270 271 5.581085 AGGTTATAATCACGAGTGAAAGTGC 59.419 40.000 10.15 0.38 43.58 4.40
271 272 7.596749 AAGGTTATAATCACGAGTGAAAGTG 57.403 36.000 10.15 0.00 43.58 3.16
298 299 9.725019 GATGAAAGGGAGTTTTATTCCAAAATT 57.275 29.630 0.00 0.00 36.40 1.82
299 300 8.321353 GGATGAAAGGGAGTTTTATTCCAAAAT 58.679 33.333 0.00 0.00 36.40 1.82
300 301 7.512402 AGGATGAAAGGGAGTTTTATTCCAAAA 59.488 33.333 0.00 0.00 36.40 2.44
301 302 7.016296 AGGATGAAAGGGAGTTTTATTCCAAA 58.984 34.615 0.00 0.00 36.40 3.28
302 303 6.437162 CAGGATGAAAGGGAGTTTTATTCCAA 59.563 38.462 0.00 0.00 39.69 3.53
303 304 5.951747 CAGGATGAAAGGGAGTTTTATTCCA 59.048 40.000 0.00 0.00 39.69 3.53
304 305 6.187682 TCAGGATGAAAGGGAGTTTTATTCC 58.812 40.000 0.00 0.00 45.97 3.01
334 335 7.397892 TTCTACGCCATCCATTTCATAAAAA 57.602 32.000 0.00 0.00 0.00 1.94
335 336 7.581213 ATTCTACGCCATCCATTTCATAAAA 57.419 32.000 0.00 0.00 0.00 1.52
338 339 6.013725 ACCTATTCTACGCCATCCATTTCATA 60.014 38.462 0.00 0.00 0.00 2.15
349 350 2.364324 GTCCATGACCTATTCTACGCCA 59.636 50.000 0.00 0.00 0.00 5.69
387 388 4.209080 GGATGGCTCTTTGAAACAAAAACG 59.791 41.667 0.00 0.00 0.00 3.60
447 449 3.883744 GAGTGTGGACTGTGGGGCG 62.884 68.421 0.00 0.00 30.16 6.13
450 452 1.300931 CGTGAGTGTGGACTGTGGG 60.301 63.158 0.00 0.00 30.16 4.61
451 453 1.441729 ACGTGAGTGTGGACTGTGG 59.558 57.895 0.00 0.00 46.97 4.17
519 560 1.214589 GAACTGCCCTTCGAGCGTA 59.785 57.895 0.00 0.00 0.00 4.42
861 916 3.431725 CACCGAAGCGAAAGGGGC 61.432 66.667 0.00 0.00 0.00 5.80
862 917 2.536997 ATCCACCGAAGCGAAAGGGG 62.537 60.000 0.00 0.00 0.00 4.79
863 918 0.676782 AATCCACCGAAGCGAAAGGG 60.677 55.000 0.00 0.00 0.00 3.95
864 919 1.130561 GAAATCCACCGAAGCGAAAGG 59.869 52.381 0.00 0.00 0.00 3.11
865 920 1.201921 CGAAATCCACCGAAGCGAAAG 60.202 52.381 0.00 0.00 0.00 2.62
866 921 0.793861 CGAAATCCACCGAAGCGAAA 59.206 50.000 0.00 0.00 0.00 3.46
867 922 0.320073 ACGAAATCCACCGAAGCGAA 60.320 50.000 0.00 0.00 0.00 4.70
868 923 0.320073 AACGAAATCCACCGAAGCGA 60.320 50.000 0.00 0.00 0.00 4.93
869 924 0.179225 CAACGAAATCCACCGAAGCG 60.179 55.000 0.00 0.00 0.00 4.68
891 946 2.278857 CAAGCTACGCGCGGAGAT 60.279 61.111 44.27 37.73 45.59 2.75
901 956 3.840763 CGAAACAAATCGAAGCAAGCTAC 59.159 43.478 0.00 0.00 45.48 3.58
905 960 3.536158 TCCGAAACAAATCGAAGCAAG 57.464 42.857 0.00 0.00 45.48 4.01
929 994 0.037697 TCCGTCGGAAACACCAGATG 60.038 55.000 12.68 0.00 38.90 2.90
931 996 0.245539 GATCCGTCGGAAACACCAGA 59.754 55.000 19.76 0.00 38.90 3.86
936 1001 0.109458 CGTCAGATCCGTCGGAAACA 60.109 55.000 19.76 0.00 34.34 2.83
963 1028 1.305219 CCCTGCAAAAATCGAGCCGA 61.305 55.000 0.00 0.00 41.13 5.54
974 1039 1.899437 CTCCCTACGCTCCCTGCAAA 61.899 60.000 0.00 0.00 43.06 3.68
975 1040 2.284331 TCCCTACGCTCCCTGCAA 60.284 61.111 0.00 0.00 43.06 4.08
1428 1513 2.050477 CGGAATATGCGGAAATTGGC 57.950 50.000 0.00 0.00 0.00 4.52
1827 2018 2.013400 CACCACGTTGCCAGCATAATA 58.987 47.619 0.00 0.00 0.00 0.98
1919 2117 2.778299 TGCAGTCAGTTTGTATCACCC 58.222 47.619 0.00 0.00 0.00 4.61
2001 2202 3.521126 ACTTAGATGGCTGTCAGGTGATT 59.479 43.478 1.14 0.00 0.00 2.57
2063 2285 5.886960 AAAACTGGCAAGATATGACACTC 57.113 39.130 0.00 0.00 44.10 3.51
2108 2331 1.128200 TTGTGGACACTACAGGCTGT 58.872 50.000 25.34 25.34 0.00 4.40
2154 2378 1.134367 CAGCTTCCAACATGGCATCAG 59.866 52.381 0.00 0.00 37.47 2.90
2176 2400 9.643693 AACATATTTCCAGCAGATAAAACAAAG 57.356 29.630 0.00 0.00 0.00 2.77
2258 2482 6.207417 ACAAAAATCACTCCAACTACATCCAG 59.793 38.462 0.00 0.00 0.00 3.86
2372 2597 3.214328 ACAACCACTCTGAAATCACACC 58.786 45.455 0.00 0.00 0.00 4.16
2379 2604 6.426937 GCTACAATAGAACAACCACTCTGAAA 59.573 38.462 0.00 0.00 0.00 2.69
2515 2740 6.888632 GGAACGGAGGGAGTAACATATATAGA 59.111 42.308 0.00 0.00 0.00 1.98
2524 2749 2.845363 TTTGGAACGGAGGGAGTAAC 57.155 50.000 0.00 0.00 0.00 2.50
2526 2751 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
2527 2752 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
2528 2753 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
2529 2754 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
2530 2755 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2531 2756 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2532 2757 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
2533 2758 2.030007 ACGACGAGTAATTTGGAACGGA 60.030 45.455 0.00 0.00 0.00 4.69
2534 2759 2.331194 ACGACGAGTAATTTGGAACGG 58.669 47.619 0.00 0.00 0.00 4.44
2535 2760 4.406069 TCTACGACGAGTAATTTGGAACG 58.594 43.478 0.00 0.00 34.45 3.95
2536 2761 6.695292 TTTCTACGACGAGTAATTTGGAAC 57.305 37.500 0.00 0.00 34.45 3.62
2537 2762 7.092079 TGATTTCTACGACGAGTAATTTGGAA 58.908 34.615 0.00 0.00 34.45 3.53
2538 2763 6.623486 TGATTTCTACGACGAGTAATTTGGA 58.377 36.000 0.00 0.00 34.45 3.53
2539 2764 6.880822 TGATTTCTACGACGAGTAATTTGG 57.119 37.500 0.00 0.00 34.45 3.28
2540 2765 8.380644 ACATTGATTTCTACGACGAGTAATTTG 58.619 33.333 0.00 3.78 34.45 2.32
2541 2766 8.475331 ACATTGATTTCTACGACGAGTAATTT 57.525 30.769 0.00 0.00 34.45 1.82
2542 2767 9.017669 GTACATTGATTTCTACGACGAGTAATT 57.982 33.333 0.00 0.00 34.45 1.40
2543 2768 7.646922 GGTACATTGATTTCTACGACGAGTAAT 59.353 37.037 0.00 0.60 34.45 1.89
2544 2769 6.968904 GGTACATTGATTTCTACGACGAGTAA 59.031 38.462 0.00 0.00 34.45 2.24
2545 2770 6.317140 AGGTACATTGATTTCTACGACGAGTA 59.683 38.462 0.00 0.00 0.00 2.59
2546 2771 5.125097 AGGTACATTGATTTCTACGACGAGT 59.875 40.000 0.00 0.00 0.00 4.18
2547 2772 5.579718 AGGTACATTGATTTCTACGACGAG 58.420 41.667 0.00 0.00 0.00 4.18
2548 2773 5.571784 AGGTACATTGATTTCTACGACGA 57.428 39.130 0.00 0.00 0.00 4.20
2549 2774 6.722301 TCTAGGTACATTGATTTCTACGACG 58.278 40.000 0.00 0.00 0.00 5.12
2550 2775 8.189460 AGTTCTAGGTACATTGATTTCTACGAC 58.811 37.037 0.00 0.00 0.00 4.34
2551 2776 8.289939 AGTTCTAGGTACATTGATTTCTACGA 57.710 34.615 0.00 0.00 0.00 3.43
2580 2805 8.797438 CGCAGGTATGGATGTATATAGATGTAT 58.203 37.037 0.00 0.00 0.00 2.29
2581 2806 7.996644 TCGCAGGTATGGATGTATATAGATGTA 59.003 37.037 0.00 0.00 0.00 2.29
2582 2807 6.833933 TCGCAGGTATGGATGTATATAGATGT 59.166 38.462 0.00 0.00 0.00 3.06
2583 2808 7.142021 GTCGCAGGTATGGATGTATATAGATG 58.858 42.308 0.00 0.00 0.00 2.90
2584 2809 6.833933 TGTCGCAGGTATGGATGTATATAGAT 59.166 38.462 0.00 0.00 0.00 1.98
2585 2810 6.184789 TGTCGCAGGTATGGATGTATATAGA 58.815 40.000 0.00 0.00 0.00 1.98
2586 2811 6.451064 TGTCGCAGGTATGGATGTATATAG 57.549 41.667 0.00 0.00 0.00 1.31
2587 2812 6.436218 ACTTGTCGCAGGTATGGATGTATATA 59.564 38.462 0.00 0.00 0.00 0.86
2588 2813 5.246203 ACTTGTCGCAGGTATGGATGTATAT 59.754 40.000 0.00 0.00 0.00 0.86
2589 2814 4.587262 ACTTGTCGCAGGTATGGATGTATA 59.413 41.667 0.00 0.00 0.00 1.47
2590 2815 3.388024 ACTTGTCGCAGGTATGGATGTAT 59.612 43.478 0.00 0.00 0.00 2.29
2591 2816 2.764010 ACTTGTCGCAGGTATGGATGTA 59.236 45.455 0.00 0.00 0.00 2.29
2592 2817 1.555075 ACTTGTCGCAGGTATGGATGT 59.445 47.619 0.00 0.00 0.00 3.06
2593 2818 2.315925 ACTTGTCGCAGGTATGGATG 57.684 50.000 0.00 0.00 0.00 3.51
2594 2819 4.689612 ATTACTTGTCGCAGGTATGGAT 57.310 40.909 3.46 0.00 0.00 3.41
2595 2820 4.439057 GAATTACTTGTCGCAGGTATGGA 58.561 43.478 3.46 0.00 0.00 3.41
2596 2821 3.245284 CGAATTACTTGTCGCAGGTATGG 59.755 47.826 3.46 0.00 0.00 2.74
2597 2822 3.245284 CCGAATTACTTGTCGCAGGTATG 59.755 47.826 3.46 0.00 35.93 2.39
2598 2823 3.131577 TCCGAATTACTTGTCGCAGGTAT 59.868 43.478 3.46 0.00 35.93 2.73
2599 2824 2.492881 TCCGAATTACTTGTCGCAGGTA 59.507 45.455 0.00 0.00 35.93 3.08
2600 2825 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00
2601 2826 2.004583 TCCGAATTACTTGTCGCAGG 57.995 50.000 0.00 0.00 35.93 4.85
2602 2827 2.222508 CGTTCCGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 35.93 5.18
2603 2828 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
2604 2829 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
2605 2830 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
2606 2831 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2607 2832 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2608 2833 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2609 2834 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
2610 2835 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
2611 2836 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
2612 2837 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
2613 2838 1.479730 GTACTCCCTCCGTTCCGAATT 59.520 52.381 0.00 0.00 0.00 2.17
2614 2839 1.109609 GTACTCCCTCCGTTCCGAAT 58.890 55.000 0.00 0.00 0.00 3.34
2615 2840 0.038744 AGTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
2616 2841 0.038744 AAGTACTCCCTCCGTTCCGA 59.961 55.000 0.00 0.00 0.00 4.55
2617 2842 0.893447 AAAGTACTCCCTCCGTTCCG 59.107 55.000 0.00 0.00 0.00 4.30
2618 2843 2.038164 ACAAAAGTACTCCCTCCGTTCC 59.962 50.000 0.00 0.00 0.00 3.62
2619 2844 3.397849 ACAAAAGTACTCCCTCCGTTC 57.602 47.619 0.00 0.00 0.00 3.95
2620 2845 3.851458 AACAAAAGTACTCCCTCCGTT 57.149 42.857 0.00 0.00 0.00 4.44
2621 2846 3.899980 ACTAACAAAAGTACTCCCTCCGT 59.100 43.478 0.00 0.00 0.00 4.69
2622 2847 4.532314 ACTAACAAAAGTACTCCCTCCG 57.468 45.455 0.00 0.00 0.00 4.63
2623 2848 6.013898 ACCTAACTAACAAAAGTACTCCCTCC 60.014 42.308 0.00 0.00 0.00 4.30
2624 2849 7.002250 ACCTAACTAACAAAAGTACTCCCTC 57.998 40.000 0.00 0.00 0.00 4.30
2625 2850 7.384524 AACCTAACTAACAAAAGTACTCCCT 57.615 36.000 0.00 0.00 0.00 4.20
2626 2851 7.521099 GCAAACCTAACTAACAAAAGTACTCCC 60.521 40.741 0.00 0.00 0.00 4.30
2627 2852 7.228108 AGCAAACCTAACTAACAAAAGTACTCC 59.772 37.037 0.00 0.00 0.00 3.85
2628 2853 8.068380 CAGCAAACCTAACTAACAAAAGTACTC 58.932 37.037 0.00 0.00 0.00 2.59
2629 2854 7.468220 GCAGCAAACCTAACTAACAAAAGTACT 60.468 37.037 0.00 0.00 0.00 2.73
2630 2855 6.635641 GCAGCAAACCTAACTAACAAAAGTAC 59.364 38.462 0.00 0.00 0.00 2.73
2684 3014 5.554437 TCATACCACAACCTACACTTCAA 57.446 39.130 0.00 0.00 0.00 2.69
2772 3102 5.728471 TGTCAACAAAAAGGCAAGATTCAA 58.272 33.333 0.00 0.00 0.00 2.69
2891 3222 2.668632 GGGATCAGGTTGACGGCA 59.331 61.111 0.00 0.00 0.00 5.69
3113 3444 2.738314 CTGCACGTTGATCATCTGTTCA 59.262 45.455 0.00 0.00 0.00 3.18
3116 3447 2.738846 GTTCTGCACGTTGATCATCTGT 59.261 45.455 0.00 0.00 0.00 3.41
3762 4098 5.356882 TCAATTCAGATGAAACGAACCAC 57.643 39.130 0.00 0.00 37.61 4.16
3763 4099 6.384258 TTTCAATTCAGATGAAACGAACCA 57.616 33.333 0.00 0.00 40.75 3.67
3796 4132 0.649475 GTGCTGCAGCGAATAGAGTG 59.351 55.000 32.11 0.00 45.83 3.51
3803 4139 0.737804 TTTTCAAGTGCTGCAGCGAA 59.262 45.000 32.11 24.93 45.83 4.70
3813 4149 3.801594 CACAAATCCGGGTTTTTCAAGTG 59.198 43.478 10.81 11.41 0.00 3.16
3819 4155 5.545063 ATTTCTCACAAATCCGGGTTTTT 57.455 34.783 10.81 0.13 0.00 1.94
3823 4159 5.110814 TCATATTTCTCACAAATCCGGGT 57.889 39.130 0.00 0.00 0.00 5.28
3844 4180 3.006940 TGCATCCGTCACATTTACCTTC 58.993 45.455 0.00 0.00 0.00 3.46
3849 4185 2.746904 CAACCTGCATCCGTCACATTTA 59.253 45.455 0.00 0.00 0.00 1.40
3850 4186 1.541147 CAACCTGCATCCGTCACATTT 59.459 47.619 0.00 0.00 0.00 2.32
3851 4187 1.167851 CAACCTGCATCCGTCACATT 58.832 50.000 0.00 0.00 0.00 2.71
3852 4188 0.036732 ACAACCTGCATCCGTCACAT 59.963 50.000 0.00 0.00 0.00 3.21
3862 4198 3.702548 ACGATGTATACCTACAACCTGCA 59.297 43.478 0.00 0.00 41.09 4.41
3888 4224 1.355043 AGTATACCCCACCCGCAAAAA 59.645 47.619 0.00 0.00 0.00 1.94
3889 4225 0.993470 AGTATACCCCACCCGCAAAA 59.007 50.000 0.00 0.00 0.00 2.44
3890 4226 0.542805 GAGTATACCCCACCCGCAAA 59.457 55.000 0.00 0.00 0.00 3.68
3891 4227 1.339644 GGAGTATACCCCACCCGCAA 61.340 60.000 0.00 0.00 0.00 4.85
3892 4228 1.763256 GGAGTATACCCCACCCGCA 60.763 63.158 0.00 0.00 0.00 5.69
3893 4229 2.514164 GGGAGTATACCCCACCCGC 61.514 68.421 19.24 0.00 43.81 6.13
3894 4230 3.881334 GGGAGTATACCCCACCCG 58.119 66.667 19.24 0.00 43.81 5.28
3901 4237 1.144503 TCCAGACGGAGGGAGTATACC 59.855 57.143 0.00 0.00 35.91 2.73
3902 4238 2.653234 TCCAGACGGAGGGAGTATAC 57.347 55.000 0.00 0.00 35.91 1.47
3918 4254 1.357334 GCGCGGACAACTTTTTCCA 59.643 52.632 8.83 0.00 0.00 3.53
3921 4257 0.656785 TAACGCGCGGACAACTTTTT 59.343 45.000 35.22 17.74 0.00 1.94
3965 4302 3.570125 AGCAGTTTAAAAGGCAGAAGGTC 59.430 43.478 13.07 0.00 0.00 3.85
4399 4815 3.073735 CAGCGAGAGGGGAGCAGT 61.074 66.667 0.00 0.00 0.00 4.40
4401 4817 3.071206 GTCAGCGAGAGGGGAGCA 61.071 66.667 0.00 0.00 0.00 4.26
4436 4852 3.691342 CCACCGGGAAGACTCGCA 61.691 66.667 6.32 0.00 38.86 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.