Multiple sequence alignment - TraesCS1B01G269000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G269000 chr1B 100.000 2831 0 0 1 2831 473041793 473044623 0.000000e+00 5228.0
1 TraesCS1B01G269000 chr1B 77.667 300 61 4 2525 2821 68261500 68261204 8.060000e-41 178.0
2 TraesCS1B01G269000 chr3A 87.962 1271 139 10 769 2035 54861091 54859831 0.000000e+00 1487.0
3 TraesCS1B01G269000 chr3A 83.935 803 120 4 2031 2830 54827373 54826577 0.000000e+00 760.0
4 TraesCS1B01G269000 chr2B 79.553 1702 278 33 773 2443 201772091 201773753 0.000000e+00 1151.0
5 TraesCS1B01G269000 chr2B 86.217 341 44 3 2491 2830 201810620 201810958 1.600000e-97 366.0
6 TraesCS1B01G269000 chr2B 79.310 203 42 0 2523 2725 91029065 91029267 2.940000e-30 143.0
7 TraesCS1B01G269000 chr2D 75.740 2061 412 56 767 2790 616498006 616495997 0.000000e+00 955.0
8 TraesCS1B01G269000 chr4B 77.346 309 62 7 2525 2829 11588413 11588109 2.900000e-40 176.0
9 TraesCS1B01G269000 chr5D 76.923 312 62 10 2523 2829 481187736 481188042 4.850000e-38 169.0
10 TraesCS1B01G269000 chr1D 76.806 263 59 2 2523 2784 333379497 333379758 2.270000e-31 147.0
11 TraesCS1B01G269000 chr3B 77.990 209 42 4 2511 2718 14383320 14383525 8.230000e-26 128.0
12 TraesCS1B01G269000 chr2A 77.512 209 43 4 2511 2718 34506992 34507197 3.830000e-24 122.0
13 TraesCS1B01G269000 chr6B 100.000 29 0 0 768 796 118072211 118072239 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G269000 chr1B 473041793 473044623 2830 False 5228 5228 100.000 1 2831 1 chr1B.!!$F1 2830
1 TraesCS1B01G269000 chr3A 54859831 54861091 1260 True 1487 1487 87.962 769 2035 1 chr3A.!!$R2 1266
2 TraesCS1B01G269000 chr3A 54826577 54827373 796 True 760 760 83.935 2031 2830 1 chr3A.!!$R1 799
3 TraesCS1B01G269000 chr2B 201772091 201773753 1662 False 1151 1151 79.553 773 2443 1 chr2B.!!$F2 1670
4 TraesCS1B01G269000 chr2D 616495997 616498006 2009 True 955 955 75.740 767 2790 1 chr2D.!!$R1 2023


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
130 131 0.034477 AATAACTGGACCGGGCCAAG 60.034 55.0 33.44 25.86 37.52 3.61 F
498 499 0.105964 TATTTAGCATCTGGCCGCGT 59.894 50.0 4.92 0.00 46.50 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1494 1501 0.249280 CACGCAAAAACTTCCCCACC 60.249 55.0 0.0 0.0 0.0 4.61 R
2264 2302 0.253207 TCTCCCTTTCTTCCCTCCCC 60.253 60.0 0.0 0.0 0.0 4.81 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 8.411991 AAAAGGATAATAAAAACCGTTGGAGA 57.588 30.769 0.00 0.00 0.00 3.71
54 55 6.997239 AGGATAATAAAAACCGTTGGAGAC 57.003 37.500 0.00 0.00 0.00 3.36
55 56 5.884232 AGGATAATAAAAACCGTTGGAGACC 59.116 40.000 0.00 0.00 0.00 3.85
56 57 5.066893 GGATAATAAAAACCGTTGGAGACCC 59.933 44.000 0.00 0.00 0.00 4.46
57 58 3.512219 ATAAAAACCGTTGGAGACCCA 57.488 42.857 0.00 0.00 41.64 4.51
102 103 8.648557 AAAAGAAAATTCAGTAAAACTGGAGC 57.351 30.769 7.18 0.00 45.94 4.70
103 104 6.332735 AGAAAATTCAGTAAAACTGGAGCC 57.667 37.500 7.18 0.00 45.94 4.70
104 105 6.071320 AGAAAATTCAGTAAAACTGGAGCCT 58.929 36.000 7.18 0.00 45.94 4.58
105 106 5.966742 AAATTCAGTAAAACTGGAGCCTC 57.033 39.130 7.18 0.00 45.94 4.70
106 107 4.640771 ATTCAGTAAAACTGGAGCCTCA 57.359 40.909 7.18 0.00 45.94 3.86
107 108 3.685139 TCAGTAAAACTGGAGCCTCAG 57.315 47.619 7.18 2.74 45.94 3.35
108 109 3.239449 TCAGTAAAACTGGAGCCTCAGA 58.761 45.455 10.40 0.00 45.94 3.27
109 110 3.646162 TCAGTAAAACTGGAGCCTCAGAA 59.354 43.478 10.40 0.00 45.94 3.02
110 111 3.748568 CAGTAAAACTGGAGCCTCAGAAC 59.251 47.826 10.40 4.08 42.35 3.01
111 112 3.391296 AGTAAAACTGGAGCCTCAGAACA 59.609 43.478 10.40 0.00 38.11 3.18
112 113 3.297134 AAAACTGGAGCCTCAGAACAA 57.703 42.857 10.40 0.00 38.11 2.83
113 114 3.515602 AAACTGGAGCCTCAGAACAAT 57.484 42.857 10.40 0.00 38.11 2.71
114 115 4.640771 AAACTGGAGCCTCAGAACAATA 57.359 40.909 10.40 0.00 38.11 1.90
115 116 4.640771 AACTGGAGCCTCAGAACAATAA 57.359 40.909 10.40 0.00 38.11 1.40
116 117 3.944087 ACTGGAGCCTCAGAACAATAAC 58.056 45.455 10.40 0.00 38.11 1.89
117 118 3.584848 ACTGGAGCCTCAGAACAATAACT 59.415 43.478 10.40 0.00 38.11 2.24
118 119 3.937706 CTGGAGCCTCAGAACAATAACTG 59.062 47.826 0.00 0.00 36.93 3.16
119 120 3.274288 GGAGCCTCAGAACAATAACTGG 58.726 50.000 0.00 0.00 35.20 4.00
120 121 3.055094 GGAGCCTCAGAACAATAACTGGA 60.055 47.826 0.00 0.00 35.20 3.86
121 122 3.935828 GAGCCTCAGAACAATAACTGGAC 59.064 47.826 0.00 0.00 35.20 4.02
122 123 3.010420 GCCTCAGAACAATAACTGGACC 58.990 50.000 0.00 0.00 35.20 4.46
123 124 3.262420 CCTCAGAACAATAACTGGACCG 58.738 50.000 0.00 0.00 35.20 4.79
124 125 3.262420 CTCAGAACAATAACTGGACCGG 58.738 50.000 0.00 0.00 35.20 5.28
125 126 2.027561 TCAGAACAATAACTGGACCGGG 60.028 50.000 6.32 0.00 35.20 5.73
126 127 1.092348 GAACAATAACTGGACCGGGC 58.908 55.000 6.32 0.21 0.00 6.13
127 128 0.323087 AACAATAACTGGACCGGGCC 60.323 55.000 23.70 23.70 0.00 5.80
128 129 1.301623 CAATAACTGGACCGGGCCA 59.698 57.895 31.87 31.87 36.30 5.36
129 130 0.322997 CAATAACTGGACCGGGCCAA 60.323 55.000 33.44 17.76 37.52 4.52
130 131 0.034477 AATAACTGGACCGGGCCAAG 60.034 55.000 33.44 25.86 37.52 3.61
131 132 0.912487 ATAACTGGACCGGGCCAAGA 60.912 55.000 33.44 19.21 37.52 3.02
132 133 1.550130 TAACTGGACCGGGCCAAGAG 61.550 60.000 33.44 22.32 37.52 2.85
133 134 4.785453 CTGGACCGGGCCAAGAGC 62.785 72.222 33.44 0.00 37.52 4.09
135 136 3.081409 GGACCGGGCCAAGAGCTA 61.081 66.667 25.88 0.00 43.05 3.32
136 137 2.501610 GACCGGGCCAAGAGCTAG 59.498 66.667 6.32 0.00 43.05 3.42
137 138 2.284699 ACCGGGCCAAGAGCTAGT 60.285 61.111 6.32 0.00 43.05 2.57
138 139 2.187946 CCGGGCCAAGAGCTAGTG 59.812 66.667 4.39 0.00 43.05 2.74
139 140 2.512515 CGGGCCAAGAGCTAGTGC 60.513 66.667 4.39 0.00 43.05 4.40
149 150 4.164252 GCTAGTGCTACACGCGTT 57.836 55.556 10.22 3.81 43.27 4.84
150 151 1.702299 GCTAGTGCTACACGCGTTG 59.298 57.895 10.22 8.21 43.27 4.10
151 152 1.683790 GCTAGTGCTACACGCGTTGG 61.684 60.000 10.22 0.71 43.27 3.77
152 153 1.076533 CTAGTGCTACACGCGTTGGG 61.077 60.000 10.22 0.00 43.27 4.12
153 154 2.495366 TAGTGCTACACGCGTTGGGG 62.495 60.000 10.22 0.00 43.27 4.96
162 163 3.899395 GCGTTGGGGCGACTATTT 58.101 55.556 0.00 0.00 0.00 1.40
163 164 1.427819 GCGTTGGGGCGACTATTTG 59.572 57.895 0.00 0.00 0.00 2.32
164 165 1.022451 GCGTTGGGGCGACTATTTGA 61.022 55.000 0.00 0.00 0.00 2.69
165 166 0.725117 CGTTGGGGCGACTATTTGAC 59.275 55.000 0.00 0.00 0.00 3.18
166 167 0.725117 GTTGGGGCGACTATTTGACG 59.275 55.000 0.00 0.00 36.94 4.35
167 168 0.391927 TTGGGGCGACTATTTGACGG 60.392 55.000 0.00 0.00 34.64 4.79
168 169 1.259142 TGGGGCGACTATTTGACGGA 61.259 55.000 0.00 0.00 34.64 4.69
169 170 0.106149 GGGGCGACTATTTGACGGAT 59.894 55.000 0.00 0.00 34.64 4.18
170 171 1.217882 GGGCGACTATTTGACGGATG 58.782 55.000 0.00 0.00 34.64 3.51
171 172 1.472728 GGGCGACTATTTGACGGATGT 60.473 52.381 0.00 0.00 34.64 3.06
172 173 1.593006 GGCGACTATTTGACGGATGTG 59.407 52.381 0.00 0.00 34.64 3.21
173 174 2.536365 GCGACTATTTGACGGATGTGA 58.464 47.619 0.00 0.00 34.64 3.58
174 175 2.535984 GCGACTATTTGACGGATGTGAG 59.464 50.000 0.00 0.00 34.64 3.51
175 176 2.535984 CGACTATTTGACGGATGTGAGC 59.464 50.000 0.00 0.00 0.00 4.26
176 177 2.535984 GACTATTTGACGGATGTGAGCG 59.464 50.000 0.00 0.00 0.00 5.03
177 178 2.094182 ACTATTTGACGGATGTGAGCGT 60.094 45.455 0.00 0.00 0.00 5.07
178 179 1.808411 ATTTGACGGATGTGAGCGTT 58.192 45.000 0.00 0.00 0.00 4.84
179 180 1.144969 TTTGACGGATGTGAGCGTTC 58.855 50.000 0.00 0.00 0.00 3.95
180 181 1.006825 TTGACGGATGTGAGCGTTCG 61.007 55.000 0.00 0.00 38.53 3.95
181 182 1.154093 GACGGATGTGAGCGTTCGA 60.154 57.895 0.00 0.00 36.19 3.71
182 183 0.731514 GACGGATGTGAGCGTTCGAA 60.732 55.000 0.00 0.00 36.19 3.71
183 184 0.319211 ACGGATGTGAGCGTTCGAAA 60.319 50.000 0.00 0.00 36.19 3.46
184 185 0.787787 CGGATGTGAGCGTTCGAAAA 59.212 50.000 0.00 0.00 34.64 2.29
185 186 1.201812 CGGATGTGAGCGTTCGAAAAG 60.202 52.381 0.00 0.00 34.64 2.27
186 187 1.798813 GGATGTGAGCGTTCGAAAAGT 59.201 47.619 0.00 0.00 0.00 2.66
187 188 2.991190 GGATGTGAGCGTTCGAAAAGTA 59.009 45.455 0.00 0.00 0.00 2.24
188 189 3.430895 GGATGTGAGCGTTCGAAAAGTAA 59.569 43.478 0.00 0.00 0.00 2.24
189 190 4.092968 GGATGTGAGCGTTCGAAAAGTAAT 59.907 41.667 0.00 0.00 0.00 1.89
190 191 5.390567 GGATGTGAGCGTTCGAAAAGTAATT 60.391 40.000 0.00 0.00 0.00 1.40
191 192 6.183360 GGATGTGAGCGTTCGAAAAGTAATTA 60.183 38.462 0.00 0.00 0.00 1.40
192 193 6.715344 TGTGAGCGTTCGAAAAGTAATTAT 57.285 33.333 0.00 0.00 0.00 1.28
193 194 7.124347 TGTGAGCGTTCGAAAAGTAATTATT 57.876 32.000 0.00 0.00 0.00 1.40
194 195 7.012943 TGTGAGCGTTCGAAAAGTAATTATTG 58.987 34.615 0.00 0.00 0.00 1.90
195 196 6.464834 GTGAGCGTTCGAAAAGTAATTATTGG 59.535 38.462 0.00 0.00 0.00 3.16
196 197 5.875930 AGCGTTCGAAAAGTAATTATTGGG 58.124 37.500 0.00 0.00 0.00 4.12
197 198 5.644636 AGCGTTCGAAAAGTAATTATTGGGA 59.355 36.000 0.00 0.00 0.00 4.37
198 199 6.149807 AGCGTTCGAAAAGTAATTATTGGGAA 59.850 34.615 0.00 0.00 0.00 3.97
199 200 6.802834 GCGTTCGAAAAGTAATTATTGGGAAA 59.197 34.615 0.00 0.00 0.00 3.13
200 201 7.486870 GCGTTCGAAAAGTAATTATTGGGAAAT 59.513 33.333 0.00 0.00 0.00 2.17
201 202 9.991388 CGTTCGAAAAGTAATTATTGGGAAATA 57.009 29.630 0.00 0.00 0.00 1.40
230 231 6.575162 TTTGAGAGGAAATTACTGGAAAGC 57.425 37.500 0.00 0.00 0.00 3.51
231 232 5.241403 TGAGAGGAAATTACTGGAAAGCA 57.759 39.130 0.00 0.00 0.00 3.91
232 233 5.819991 TGAGAGGAAATTACTGGAAAGCAT 58.180 37.500 0.00 0.00 0.00 3.79
233 234 6.248433 TGAGAGGAAATTACTGGAAAGCATT 58.752 36.000 0.00 0.00 0.00 3.56
234 235 7.402054 TGAGAGGAAATTACTGGAAAGCATTA 58.598 34.615 0.00 0.00 0.00 1.90
235 236 7.888021 TGAGAGGAAATTACTGGAAAGCATTAA 59.112 33.333 0.00 0.00 0.00 1.40
236 237 8.829373 AGAGGAAATTACTGGAAAGCATTAAT 57.171 30.769 0.00 0.00 0.00 1.40
237 238 8.907885 AGAGGAAATTACTGGAAAGCATTAATC 58.092 33.333 0.00 0.00 0.00 1.75
238 239 8.011844 AGGAAATTACTGGAAAGCATTAATCC 57.988 34.615 0.00 0.00 0.00 3.01
239 240 7.841222 AGGAAATTACTGGAAAGCATTAATCCT 59.159 33.333 0.00 0.00 34.24 3.24
240 241 8.478066 GGAAATTACTGGAAAGCATTAATCCTT 58.522 33.333 0.00 0.00 34.24 3.36
241 242 9.875691 GAAATTACTGGAAAGCATTAATCCTTT 57.124 29.630 3.97 3.97 34.24 3.11
247 248 9.136323 ACTGGAAAGCATTAATCCTTTATTAGG 57.864 33.333 4.32 0.00 46.27 2.69
268 269 6.610075 AGGAGACCCTAATTGTAACGTTAA 57.390 37.500 10.11 0.00 42.15 2.01
269 270 6.637657 AGGAGACCCTAATTGTAACGTTAAG 58.362 40.000 10.11 3.26 42.15 1.85
270 271 6.438425 AGGAGACCCTAATTGTAACGTTAAGA 59.562 38.462 10.11 1.84 42.15 2.10
271 272 6.755607 GGAGACCCTAATTGTAACGTTAAGAG 59.244 42.308 10.11 3.30 0.00 2.85
272 273 6.637657 AGACCCTAATTGTAACGTTAAGAGG 58.362 40.000 10.11 11.41 0.00 3.69
273 274 6.438425 AGACCCTAATTGTAACGTTAAGAGGA 59.562 38.462 10.11 0.00 0.00 3.71
274 275 7.008021 ACCCTAATTGTAACGTTAAGAGGAA 57.992 36.000 10.11 0.00 0.00 3.36
275 276 7.452562 ACCCTAATTGTAACGTTAAGAGGAAA 58.547 34.615 10.11 0.00 0.00 3.13
276 277 7.605309 ACCCTAATTGTAACGTTAAGAGGAAAG 59.395 37.037 10.11 2.52 0.00 2.62
277 278 7.605309 CCCTAATTGTAACGTTAAGAGGAAAGT 59.395 37.037 10.11 0.88 0.00 2.66
278 279 9.643693 CCTAATTGTAACGTTAAGAGGAAAGTA 57.356 33.333 10.11 1.91 0.00 2.24
280 281 7.592439 ATTGTAACGTTAAGAGGAAAGTAGC 57.408 36.000 10.11 0.00 0.00 3.58
281 282 5.473039 TGTAACGTTAAGAGGAAAGTAGCC 58.527 41.667 10.11 0.00 0.00 3.93
282 283 4.612264 AACGTTAAGAGGAAAGTAGCCA 57.388 40.909 0.00 0.00 0.00 4.75
283 284 4.612264 ACGTTAAGAGGAAAGTAGCCAA 57.388 40.909 0.00 0.00 0.00 4.52
284 285 4.566987 ACGTTAAGAGGAAAGTAGCCAAG 58.433 43.478 0.00 0.00 0.00 3.61
285 286 4.282703 ACGTTAAGAGGAAAGTAGCCAAGA 59.717 41.667 0.00 0.00 0.00 3.02
286 287 4.626172 CGTTAAGAGGAAAGTAGCCAAGAC 59.374 45.833 0.00 0.00 0.00 3.01
287 288 3.704800 AAGAGGAAAGTAGCCAAGACC 57.295 47.619 0.00 0.00 0.00 3.85
288 289 1.909986 AGAGGAAAGTAGCCAAGACCC 59.090 52.381 0.00 0.00 0.00 4.46
289 290 1.628846 GAGGAAAGTAGCCAAGACCCA 59.371 52.381 0.00 0.00 0.00 4.51
290 291 1.630878 AGGAAAGTAGCCAAGACCCAG 59.369 52.381 0.00 0.00 0.00 4.45
291 292 1.340114 GGAAAGTAGCCAAGACCCAGG 60.340 57.143 0.00 0.00 0.00 4.45
292 293 0.698818 AAAGTAGCCAAGACCCAGGG 59.301 55.000 2.85 2.85 0.00 4.45
293 294 0.475828 AAGTAGCCAAGACCCAGGGT 60.476 55.000 12.53 12.53 39.44 4.34
301 302 2.033602 GACCCAGGGTCGGTTTGG 59.966 66.667 23.67 0.00 43.14 3.28
302 303 2.775219 ACCCAGGGTCGGTTTGGT 60.775 61.111 4.76 0.00 0.00 3.67
303 304 2.347691 GACCCAGGGTCGGTTTGGTT 62.348 60.000 23.67 0.00 43.14 3.67
304 305 1.152631 CCCAGGGTCGGTTTGGTTT 60.153 57.895 0.00 0.00 0.00 3.27
305 306 1.460273 CCCAGGGTCGGTTTGGTTTG 61.460 60.000 0.00 0.00 0.00 2.93
306 307 0.753848 CCAGGGTCGGTTTGGTTTGT 60.754 55.000 0.00 0.00 0.00 2.83
307 308 0.383949 CAGGGTCGGTTTGGTTTGTG 59.616 55.000 0.00 0.00 0.00 3.33
308 309 0.753848 AGGGTCGGTTTGGTTTGTGG 60.754 55.000 0.00 0.00 0.00 4.17
309 310 1.066752 GGTCGGTTTGGTTTGTGGC 59.933 57.895 0.00 0.00 0.00 5.01
310 311 1.388837 GGTCGGTTTGGTTTGTGGCT 61.389 55.000 0.00 0.00 0.00 4.75
311 312 0.458260 GTCGGTTTGGTTTGTGGCTT 59.542 50.000 0.00 0.00 0.00 4.35
312 313 0.457851 TCGGTTTGGTTTGTGGCTTG 59.542 50.000 0.00 0.00 0.00 4.01
313 314 1.151172 CGGTTTGGTTTGTGGCTTGC 61.151 55.000 0.00 0.00 0.00 4.01
314 315 0.813610 GGTTTGGTTTGTGGCTTGCC 60.814 55.000 4.43 4.43 0.00 4.52
315 316 0.813610 GTTTGGTTTGTGGCTTGCCC 60.814 55.000 9.35 1.44 0.00 5.36
316 317 1.977293 TTTGGTTTGTGGCTTGCCCC 61.977 55.000 9.35 3.20 0.00 5.80
317 318 2.524148 GGTTTGTGGCTTGCCCCT 60.524 61.111 9.35 0.00 0.00 4.79
318 319 2.736531 GTTTGTGGCTTGCCCCTG 59.263 61.111 9.35 0.00 0.00 4.45
319 320 2.133641 GTTTGTGGCTTGCCCCTGT 61.134 57.895 9.35 0.00 0.00 4.00
320 321 1.382420 TTTGTGGCTTGCCCCTGTT 60.382 52.632 9.35 0.00 0.00 3.16
321 322 1.684386 TTTGTGGCTTGCCCCTGTTG 61.684 55.000 9.35 0.00 0.00 3.33
322 323 3.994853 GTGGCTTGCCCCTGTTGC 61.995 66.667 9.35 0.00 0.00 4.17
325 326 3.688159 GCTTGCCCCTGTTGCCTG 61.688 66.667 0.00 0.00 0.00 4.85
326 327 2.993264 CTTGCCCCTGTTGCCTGG 60.993 66.667 0.00 0.00 0.00 4.45
327 328 3.506743 TTGCCCCTGTTGCCTGGA 61.507 61.111 0.00 0.00 31.55 3.86
328 329 3.080158 TTGCCCCTGTTGCCTGGAA 62.080 57.895 0.00 0.00 31.55 3.53
329 330 2.991540 GCCCCTGTTGCCTGGAAC 60.992 66.667 0.00 0.00 31.55 3.62
330 331 2.846532 CCCCTGTTGCCTGGAACT 59.153 61.111 0.00 0.00 31.55 3.01
331 332 1.153756 CCCCTGTTGCCTGGAACTT 59.846 57.895 0.00 0.00 31.55 2.66
332 333 0.469892 CCCCTGTTGCCTGGAACTTT 60.470 55.000 0.00 0.00 31.55 2.66
333 334 1.413118 CCCTGTTGCCTGGAACTTTT 58.587 50.000 0.00 0.00 31.55 2.27
334 335 1.069049 CCCTGTTGCCTGGAACTTTTG 59.931 52.381 0.00 0.00 31.55 2.44
335 336 1.756538 CCTGTTGCCTGGAACTTTTGT 59.243 47.619 0.00 0.00 31.55 2.83
336 337 2.481795 CCTGTTGCCTGGAACTTTTGTG 60.482 50.000 0.00 0.00 31.55 3.33
337 338 2.166254 CTGTTGCCTGGAACTTTTGTGT 59.834 45.455 0.00 0.00 0.00 3.72
338 339 2.564947 TGTTGCCTGGAACTTTTGTGTT 59.435 40.909 0.00 0.00 0.00 3.32
339 340 2.929398 GTTGCCTGGAACTTTTGTGTTG 59.071 45.455 0.00 0.00 0.00 3.33
340 341 1.134848 TGCCTGGAACTTTTGTGTTGC 60.135 47.619 0.00 0.00 38.49 4.17
341 342 1.134848 GCCTGGAACTTTTGTGTTGCA 60.135 47.619 0.00 0.00 43.94 4.08
342 343 2.483538 GCCTGGAACTTTTGTGTTGCAT 60.484 45.455 0.00 0.00 44.76 3.96
343 344 3.125316 CCTGGAACTTTTGTGTTGCATG 58.875 45.455 2.40 0.00 44.76 4.06
344 345 3.125316 CTGGAACTTTTGTGTTGCATGG 58.875 45.455 2.40 0.00 44.76 3.66
345 346 1.866601 GGAACTTTTGTGTTGCATGGC 59.133 47.619 0.00 0.00 38.02 4.40
346 347 1.522258 GAACTTTTGTGTTGCATGGCG 59.478 47.619 0.00 0.00 0.00 5.69
347 348 0.459489 ACTTTTGTGTTGCATGGCGT 59.541 45.000 0.00 0.00 0.00 5.68
348 349 1.678627 ACTTTTGTGTTGCATGGCGTA 59.321 42.857 0.00 0.00 0.00 4.42
349 350 2.295909 ACTTTTGTGTTGCATGGCGTAT 59.704 40.909 0.00 0.00 0.00 3.06
350 351 3.504134 ACTTTTGTGTTGCATGGCGTATA 59.496 39.130 0.00 0.00 0.00 1.47
351 352 3.479505 TTTGTGTTGCATGGCGTATAC 57.520 42.857 0.00 0.00 0.00 1.47
352 353 1.003108 TGTGTTGCATGGCGTATACG 58.997 50.000 20.87 20.87 43.27 3.06
366 367 4.111489 CGTATACGCGGAATTTTCCTTC 57.889 45.455 13.08 0.00 45.33 3.46
367 368 3.060070 CGTATACGCGGAATTTTCCTTCC 60.060 47.826 13.08 0.00 45.33 3.46
368 369 2.773993 TACGCGGAATTTTCCTTCCT 57.226 45.000 12.47 0.00 45.33 3.36
369 370 1.165270 ACGCGGAATTTTCCTTCCTG 58.835 50.000 12.47 0.00 45.33 3.86
370 371 1.271163 ACGCGGAATTTTCCTTCCTGA 60.271 47.619 12.47 0.00 45.33 3.86
371 372 2.017049 CGCGGAATTTTCCTTCCTGAT 58.983 47.619 0.00 0.00 45.33 2.90
372 373 2.423538 CGCGGAATTTTCCTTCCTGATT 59.576 45.455 0.00 0.00 45.33 2.57
373 374 3.625764 CGCGGAATTTTCCTTCCTGATTA 59.374 43.478 0.00 0.00 45.33 1.75
374 375 4.260784 CGCGGAATTTTCCTTCCTGATTAG 60.261 45.833 0.00 0.00 45.33 1.73
375 376 4.036852 GCGGAATTTTCCTTCCTGATTAGG 59.963 45.833 7.69 0.00 45.33 2.69
376 377 4.036852 CGGAATTTTCCTTCCTGATTAGGC 59.963 45.833 7.69 0.00 45.33 3.93
377 378 5.204292 GGAATTTTCCTTCCTGATTAGGCT 58.796 41.667 0.00 0.00 42.86 4.58
378 379 6.365520 GGAATTTTCCTTCCTGATTAGGCTA 58.634 40.000 0.00 0.00 42.86 3.93
379 380 6.488344 GGAATTTTCCTTCCTGATTAGGCTAG 59.512 42.308 0.00 0.00 42.86 3.42
380 381 6.582929 ATTTTCCTTCCTGATTAGGCTAGT 57.417 37.500 0.00 0.00 44.22 2.57
381 382 5.359194 TTTCCTTCCTGATTAGGCTAGTG 57.641 43.478 0.00 0.00 44.22 2.74
382 383 2.700897 TCCTTCCTGATTAGGCTAGTGC 59.299 50.000 0.00 0.00 44.22 4.40
383 384 2.435805 CCTTCCTGATTAGGCTAGTGCA 59.564 50.000 0.00 0.00 44.22 4.57
384 385 3.494048 CCTTCCTGATTAGGCTAGTGCAG 60.494 52.174 0.00 11.24 44.22 4.41
385 386 3.032265 TCCTGATTAGGCTAGTGCAGA 57.968 47.619 16.85 2.83 44.22 4.26
386 387 3.581101 TCCTGATTAGGCTAGTGCAGAT 58.419 45.455 16.85 0.00 44.22 2.90
387 388 4.740902 TCCTGATTAGGCTAGTGCAGATA 58.259 43.478 16.85 6.61 44.22 1.98
388 389 4.524714 TCCTGATTAGGCTAGTGCAGATAC 59.475 45.833 16.85 0.00 44.22 2.24
389 390 4.480541 CTGATTAGGCTAGTGCAGATACG 58.519 47.826 12.30 0.00 41.91 3.06
390 391 4.142038 TGATTAGGCTAGTGCAGATACGA 58.858 43.478 0.00 0.00 41.91 3.43
391 392 4.583073 TGATTAGGCTAGTGCAGATACGAA 59.417 41.667 0.00 0.00 41.91 3.85
392 393 4.569761 TTAGGCTAGTGCAGATACGAAG 57.430 45.455 0.00 0.00 41.91 3.79
393 394 1.067821 AGGCTAGTGCAGATACGAAGC 59.932 52.381 0.00 0.00 41.91 3.86
394 395 1.202417 GGCTAGTGCAGATACGAAGCA 60.202 52.381 0.00 0.00 41.91 3.91
395 396 2.546795 GGCTAGTGCAGATACGAAGCAT 60.547 50.000 0.00 0.00 40.78 3.79
396 397 3.126831 GCTAGTGCAGATACGAAGCATT 58.873 45.455 0.00 0.00 40.78 3.56
397 398 3.557595 GCTAGTGCAGATACGAAGCATTT 59.442 43.478 0.00 0.00 40.78 2.32
398 399 4.551603 GCTAGTGCAGATACGAAGCATTTG 60.552 45.833 0.00 0.00 40.78 2.32
399 400 2.679837 AGTGCAGATACGAAGCATTTGG 59.320 45.455 0.00 0.00 40.78 3.28
400 401 2.420022 GTGCAGATACGAAGCATTTGGT 59.580 45.455 0.00 0.00 40.78 3.67
401 402 3.081061 TGCAGATACGAAGCATTTGGTT 58.919 40.909 0.00 0.00 38.61 3.67
402 403 3.505680 TGCAGATACGAAGCATTTGGTTT 59.494 39.130 0.00 0.00 35.69 3.27
403 404 3.853671 GCAGATACGAAGCATTTGGTTTG 59.146 43.478 7.94 7.94 41.41 2.93
404 405 4.414852 CAGATACGAAGCATTTGGTTTGG 58.585 43.478 12.89 4.45 40.31 3.28
405 406 4.079253 AGATACGAAGCATTTGGTTTGGT 58.921 39.130 12.89 9.09 40.31 3.67
406 407 2.793278 ACGAAGCATTTGGTTTGGTC 57.207 45.000 12.89 0.00 40.31 4.02
407 408 1.339929 ACGAAGCATTTGGTTTGGTCC 59.660 47.619 12.89 0.00 40.31 4.46
408 409 1.336795 CGAAGCATTTGGTTTGGTCCC 60.337 52.381 2.43 0.00 35.69 4.46
409 410 1.970640 GAAGCATTTGGTTTGGTCCCT 59.029 47.619 0.00 0.00 35.69 4.20
410 411 1.341080 AGCATTTGGTTTGGTCCCTG 58.659 50.000 0.00 0.00 0.00 4.45
411 412 0.321346 GCATTTGGTTTGGTCCCTGG 59.679 55.000 0.00 0.00 0.00 4.45
412 413 0.321346 CATTTGGTTTGGTCCCTGGC 59.679 55.000 0.00 0.00 0.00 4.85
413 414 0.835971 ATTTGGTTTGGTCCCTGGCC 60.836 55.000 0.00 0.00 0.00 5.36
414 415 1.955458 TTTGGTTTGGTCCCTGGCCT 61.955 55.000 3.32 0.00 0.00 5.19
415 416 2.283173 GGTTTGGTCCCTGGCCTG 60.283 66.667 3.32 2.54 0.00 4.85
416 417 2.283173 GTTTGGTCCCTGGCCTGG 60.283 66.667 21.51 21.51 0.00 4.45
417 418 2.780924 TTTGGTCCCTGGCCTGGT 60.781 61.111 25.58 0.00 0.00 4.00
418 419 1.464395 TTTGGTCCCTGGCCTGGTA 60.464 57.895 25.58 9.06 0.00 3.25
419 420 1.068943 TTTGGTCCCTGGCCTGGTAA 61.069 55.000 25.58 11.89 0.00 2.85
420 421 1.068943 TTGGTCCCTGGCCTGGTAAA 61.069 55.000 25.58 12.05 0.00 2.01
421 422 1.303282 GGTCCCTGGCCTGGTAAAG 59.697 63.158 25.58 11.58 0.00 1.85
422 423 1.378646 GTCCCTGGCCTGGTAAAGC 60.379 63.158 25.58 8.34 0.00 3.51
428 429 2.568003 GGCCTGGTAAAGCCTCAAC 58.432 57.895 0.00 0.00 46.14 3.18
429 430 1.305930 GGCCTGGTAAAGCCTCAACG 61.306 60.000 0.00 0.00 46.14 4.10
430 431 0.605589 GCCTGGTAAAGCCTCAACGT 60.606 55.000 0.00 0.00 38.35 3.99
431 432 1.439679 CCTGGTAAAGCCTCAACGTC 58.560 55.000 0.00 0.00 38.35 4.34
432 433 1.439679 CTGGTAAAGCCTCAACGTCC 58.560 55.000 0.00 0.00 38.35 4.79
433 434 1.002087 CTGGTAAAGCCTCAACGTCCT 59.998 52.381 0.00 0.00 38.35 3.85
434 435 2.232941 CTGGTAAAGCCTCAACGTCCTA 59.767 50.000 0.00 0.00 38.35 2.94
435 436 2.835764 TGGTAAAGCCTCAACGTCCTAT 59.164 45.455 0.00 0.00 38.35 2.57
436 437 3.118884 TGGTAAAGCCTCAACGTCCTATC 60.119 47.826 0.00 0.00 38.35 2.08
437 438 3.118884 GGTAAAGCCTCAACGTCCTATCA 60.119 47.826 0.00 0.00 0.00 2.15
438 439 2.674796 AAGCCTCAACGTCCTATCAC 57.325 50.000 0.00 0.00 0.00 3.06
439 440 0.456221 AGCCTCAACGTCCTATCACG 59.544 55.000 0.00 0.00 45.65 4.35
440 441 0.527817 GCCTCAACGTCCTATCACGG 60.528 60.000 0.00 0.00 44.41 4.94
441 442 0.815734 CCTCAACGTCCTATCACGGT 59.184 55.000 0.00 0.00 44.41 4.83
444 445 2.965805 AACGTCCTATCACGGTGGA 58.034 52.632 8.50 0.00 44.41 4.02
445 446 0.529378 AACGTCCTATCACGGTGGAC 59.471 55.000 8.50 6.79 44.41 4.02
446 447 1.318158 ACGTCCTATCACGGTGGACC 61.318 60.000 8.50 0.00 45.31 4.46
447 448 1.035932 CGTCCTATCACGGTGGACCT 61.036 60.000 8.50 0.00 45.31 3.85
448 449 1.748244 CGTCCTATCACGGTGGACCTA 60.748 57.143 8.50 0.00 45.31 3.08
449 450 2.595238 GTCCTATCACGGTGGACCTAT 58.405 52.381 8.50 0.00 43.10 2.57
450 451 2.963782 GTCCTATCACGGTGGACCTATT 59.036 50.000 8.50 0.00 43.10 1.73
451 452 3.387050 GTCCTATCACGGTGGACCTATTT 59.613 47.826 8.50 0.00 43.10 1.40
452 453 4.035112 TCCTATCACGGTGGACCTATTTT 58.965 43.478 8.50 0.00 0.00 1.82
453 454 4.472108 TCCTATCACGGTGGACCTATTTTT 59.528 41.667 8.50 0.00 0.00 1.94
475 476 5.643379 TTTAGTTCAACATTCATCCAGGC 57.357 39.130 0.00 0.00 0.00 4.85
476 477 3.446442 AGTTCAACATTCATCCAGGCT 57.554 42.857 0.00 0.00 0.00 4.58
477 478 3.087031 AGTTCAACATTCATCCAGGCTG 58.913 45.455 7.75 7.75 0.00 4.85
478 479 1.466856 TCAACATTCATCCAGGCTGC 58.533 50.000 9.56 0.00 0.00 5.25
479 480 1.005097 TCAACATTCATCCAGGCTGCT 59.995 47.619 9.56 0.00 0.00 4.24
480 481 2.239402 TCAACATTCATCCAGGCTGCTA 59.761 45.455 9.56 0.00 0.00 3.49
481 482 3.117776 TCAACATTCATCCAGGCTGCTAT 60.118 43.478 9.56 1.52 0.00 2.97
482 483 3.589951 ACATTCATCCAGGCTGCTATT 57.410 42.857 9.56 0.00 0.00 1.73
483 484 3.907221 ACATTCATCCAGGCTGCTATTT 58.093 40.909 9.56 0.00 0.00 1.40
484 485 5.052693 ACATTCATCCAGGCTGCTATTTA 57.947 39.130 9.56 0.00 0.00 1.40
485 486 5.068636 ACATTCATCCAGGCTGCTATTTAG 58.931 41.667 9.56 0.00 0.00 1.85
497 498 0.792640 CTATTTAGCATCTGGCCGCG 59.207 55.000 0.00 0.00 46.50 6.46
498 499 0.105964 TATTTAGCATCTGGCCGCGT 59.894 50.000 4.92 0.00 46.50 6.01
499 500 1.439353 ATTTAGCATCTGGCCGCGTG 61.439 55.000 4.92 0.00 46.50 5.34
541 542 2.435372 CCTGGCCAGGCTAATTACAA 57.565 50.000 38.39 0.00 42.44 2.41
542 543 2.024414 CCTGGCCAGGCTAATTACAAC 58.976 52.381 38.39 0.00 42.44 3.32
543 544 2.357154 CCTGGCCAGGCTAATTACAACT 60.357 50.000 38.39 0.00 42.44 3.16
544 545 3.118038 CCTGGCCAGGCTAATTACAACTA 60.118 47.826 38.39 0.00 42.44 2.24
545 546 4.130118 CTGGCCAGGCTAATTACAACTAG 58.870 47.826 26.14 0.00 0.00 2.57
546 547 2.879026 GGCCAGGCTAATTACAACTAGC 59.121 50.000 12.43 0.00 39.89 3.42
547 548 3.541632 GCCAGGCTAATTACAACTAGCA 58.458 45.455 3.29 0.00 41.96 3.49
548 549 3.561725 GCCAGGCTAATTACAACTAGCAG 59.438 47.826 3.29 0.00 41.96 4.24
549 550 4.130118 CCAGGCTAATTACAACTAGCAGG 58.870 47.826 4.98 2.70 41.96 4.85
550 551 4.384208 CCAGGCTAATTACAACTAGCAGGT 60.384 45.833 4.98 0.00 41.96 4.00
551 552 5.163343 CCAGGCTAATTACAACTAGCAGGTA 60.163 44.000 4.98 0.00 41.96 3.08
552 553 5.986135 CAGGCTAATTACAACTAGCAGGTAG 59.014 44.000 5.02 5.02 41.96 3.18
553 554 5.897824 AGGCTAATTACAACTAGCAGGTAGA 59.102 40.000 13.77 0.00 41.96 2.59
554 555 6.383147 AGGCTAATTACAACTAGCAGGTAGAA 59.617 38.462 13.77 0.00 41.96 2.10
555 556 6.702282 GGCTAATTACAACTAGCAGGTAGAAG 59.298 42.308 13.77 7.46 41.96 2.85
556 557 6.702282 GCTAATTACAACTAGCAGGTAGAAGG 59.298 42.308 13.77 4.83 40.27 3.46
557 558 4.467198 TTACAACTAGCAGGTAGAAGGC 57.533 45.455 13.77 0.00 32.41 4.35
558 559 1.204941 ACAACTAGCAGGTAGAAGGCG 59.795 52.381 13.77 0.00 32.41 5.52
559 560 0.175989 AACTAGCAGGTAGAAGGCGC 59.824 55.000 13.77 0.00 32.41 6.53
560 561 1.068250 CTAGCAGGTAGAAGGCGCC 59.932 63.158 21.89 21.89 0.00 6.53
561 562 2.685387 CTAGCAGGTAGAAGGCGCCG 62.685 65.000 23.20 4.86 0.00 6.46
581 582 3.554692 GCCGCGACCGTGATTGAG 61.555 66.667 8.23 0.00 0.00 3.02
582 583 3.554692 CCGCGACCGTGATTGAGC 61.555 66.667 8.23 0.00 0.00 4.26
583 584 3.554692 CGCGACCGTGATTGAGCC 61.555 66.667 0.00 0.00 0.00 4.70
584 585 3.195698 GCGACCGTGATTGAGCCC 61.196 66.667 0.00 0.00 0.00 5.19
585 586 2.885644 CGACCGTGATTGAGCCCG 60.886 66.667 0.00 0.00 0.00 6.13
586 587 2.264794 GACCGTGATTGAGCCCGT 59.735 61.111 0.00 0.00 0.00 5.28
587 588 2.047274 ACCGTGATTGAGCCCGTG 60.047 61.111 0.00 0.00 0.00 4.94
588 589 3.499737 CCGTGATTGAGCCCGTGC 61.500 66.667 0.00 0.00 37.95 5.34
589 590 3.853330 CGTGATTGAGCCCGTGCG 61.853 66.667 0.00 0.00 44.33 5.34
590 591 2.742372 GTGATTGAGCCCGTGCGT 60.742 61.111 0.00 0.00 44.33 5.24
591 592 1.447140 GTGATTGAGCCCGTGCGTA 60.447 57.895 0.00 0.00 44.33 4.42
592 593 0.810031 GTGATTGAGCCCGTGCGTAT 60.810 55.000 0.00 0.00 44.33 3.06
593 594 0.809636 TGATTGAGCCCGTGCGTATG 60.810 55.000 0.00 0.00 44.33 2.39
594 595 0.810031 GATTGAGCCCGTGCGTATGT 60.810 55.000 0.00 0.00 44.33 2.29
595 596 1.089481 ATTGAGCCCGTGCGTATGTG 61.089 55.000 0.00 0.00 44.33 3.21
596 597 2.125673 GAGCCCGTGCGTATGTGT 60.126 61.111 0.00 0.00 44.33 3.72
597 598 1.740296 GAGCCCGTGCGTATGTGTT 60.740 57.895 0.00 0.00 44.33 3.32
598 599 1.296056 GAGCCCGTGCGTATGTGTTT 61.296 55.000 0.00 0.00 44.33 2.83
599 600 1.154301 GCCCGTGCGTATGTGTTTG 60.154 57.895 0.00 0.00 0.00 2.93
600 601 1.847890 GCCCGTGCGTATGTGTTTGT 61.848 55.000 0.00 0.00 0.00 2.83
601 602 0.589223 CCCGTGCGTATGTGTTTGTT 59.411 50.000 0.00 0.00 0.00 2.83
602 603 1.002251 CCCGTGCGTATGTGTTTGTTT 60.002 47.619 0.00 0.00 0.00 2.83
603 604 2.541999 CCCGTGCGTATGTGTTTGTTTT 60.542 45.455 0.00 0.00 0.00 2.43
604 605 3.109619 CCGTGCGTATGTGTTTGTTTTT 58.890 40.909 0.00 0.00 0.00 1.94
629 630 9.822727 TTTCTATTTTGAAATAAGAGAAGGGGT 57.177 29.630 0.00 0.00 31.81 4.95
630 631 8.807948 TCTATTTTGAAATAAGAGAAGGGGTG 57.192 34.615 0.00 0.00 31.03 4.61
631 632 6.857437 ATTTTGAAATAAGAGAAGGGGTGG 57.143 37.500 0.00 0.00 0.00 4.61
632 633 5.333566 TTTGAAATAAGAGAAGGGGTGGT 57.666 39.130 0.00 0.00 0.00 4.16
633 634 4.301072 TGAAATAAGAGAAGGGGTGGTG 57.699 45.455 0.00 0.00 0.00 4.17
634 635 3.010138 TGAAATAAGAGAAGGGGTGGTGG 59.990 47.826 0.00 0.00 0.00 4.61
635 636 2.361085 ATAAGAGAAGGGGTGGTGGT 57.639 50.000 0.00 0.00 0.00 4.16
636 637 3.502051 ATAAGAGAAGGGGTGGTGGTA 57.498 47.619 0.00 0.00 0.00 3.25
637 638 1.657804 AAGAGAAGGGGTGGTGGTAG 58.342 55.000 0.00 0.00 0.00 3.18
638 639 0.492276 AGAGAAGGGGTGGTGGTAGT 59.508 55.000 0.00 0.00 0.00 2.73
639 640 1.720533 AGAGAAGGGGTGGTGGTAGTA 59.279 52.381 0.00 0.00 0.00 1.82
640 641 1.829849 GAGAAGGGGTGGTGGTAGTAC 59.170 57.143 0.00 0.00 0.00 2.73
641 642 1.150560 AGAAGGGGTGGTGGTAGTACA 59.849 52.381 2.06 0.00 0.00 2.90
642 643 1.553704 GAAGGGGTGGTGGTAGTACAG 59.446 57.143 2.06 0.00 0.00 2.74
643 644 0.788383 AGGGGTGGTGGTAGTACAGA 59.212 55.000 2.06 0.00 0.00 3.41
644 645 1.192428 GGGGTGGTGGTAGTACAGAG 58.808 60.000 2.06 0.00 0.00 3.35
645 646 1.192428 GGGTGGTGGTAGTACAGAGG 58.808 60.000 2.06 0.00 0.00 3.69
646 647 1.551791 GGGTGGTGGTAGTACAGAGGT 60.552 57.143 2.06 0.00 0.00 3.85
647 648 1.823610 GGTGGTGGTAGTACAGAGGTC 59.176 57.143 2.06 0.00 0.00 3.85
648 649 1.471684 GTGGTGGTAGTACAGAGGTCG 59.528 57.143 2.06 0.00 0.00 4.79
649 650 1.352017 TGGTGGTAGTACAGAGGTCGA 59.648 52.381 2.06 0.00 0.00 4.20
650 651 2.015587 GGTGGTAGTACAGAGGTCGAG 58.984 57.143 2.06 0.00 0.00 4.04
651 652 1.401199 GTGGTAGTACAGAGGTCGAGC 59.599 57.143 6.48 6.48 0.00 5.03
652 653 1.281287 TGGTAGTACAGAGGTCGAGCT 59.719 52.381 18.67 18.67 0.00 4.09
653 654 1.671845 GGTAGTACAGAGGTCGAGCTG 59.328 57.143 23.97 14.59 38.10 4.24
654 655 2.630158 GTAGTACAGAGGTCGAGCTGA 58.370 52.381 23.97 1.21 36.07 4.26
655 656 2.428544 AGTACAGAGGTCGAGCTGAT 57.571 50.000 23.97 7.54 36.07 2.90
656 657 2.729194 AGTACAGAGGTCGAGCTGATT 58.271 47.619 23.97 7.75 36.07 2.57
657 658 2.425312 AGTACAGAGGTCGAGCTGATTG 59.575 50.000 23.97 18.39 36.07 2.67
658 659 0.108424 ACAGAGGTCGAGCTGATTGC 60.108 55.000 23.97 7.03 43.29 3.56
659 660 0.108472 CAGAGGTCGAGCTGATTGCA 60.108 55.000 23.97 0.00 45.94 4.08
660 661 0.175302 AGAGGTCGAGCTGATTGCAG 59.825 55.000 23.97 0.00 45.94 4.41
661 662 0.174389 GAGGTCGAGCTGATTGCAGA 59.826 55.000 23.97 0.00 45.17 4.26
662 663 0.108424 AGGTCGAGCTGATTGCAGAC 60.108 55.000 17.85 0.00 45.17 3.51
663 664 1.416813 GGTCGAGCTGATTGCAGACG 61.417 60.000 7.51 0.00 45.64 4.18
664 665 1.807165 TCGAGCTGATTGCAGACGC 60.807 57.895 0.00 0.00 45.17 5.19
665 666 1.808799 CGAGCTGATTGCAGACGCT 60.809 57.895 0.00 2.17 45.17 5.07
666 667 0.526310 CGAGCTGATTGCAGACGCTA 60.526 55.000 0.00 0.00 45.17 4.26
667 668 1.863267 GAGCTGATTGCAGACGCTAT 58.137 50.000 0.00 0.00 45.17 2.97
668 669 2.208431 GAGCTGATTGCAGACGCTATT 58.792 47.619 0.00 0.00 45.17 1.73
669 670 2.208431 AGCTGATTGCAGACGCTATTC 58.792 47.619 0.00 0.00 45.17 1.75
670 671 2.158986 AGCTGATTGCAGACGCTATTCT 60.159 45.455 0.00 0.00 45.17 2.40
671 672 2.611292 GCTGATTGCAGACGCTATTCTT 59.389 45.455 0.00 0.00 45.17 2.52
672 673 3.804325 GCTGATTGCAGACGCTATTCTTA 59.196 43.478 0.00 0.00 45.17 2.10
673 674 4.450419 GCTGATTGCAGACGCTATTCTTAT 59.550 41.667 0.00 0.00 45.17 1.73
674 675 5.049818 GCTGATTGCAGACGCTATTCTTATT 60.050 40.000 0.00 0.00 45.17 1.40
675 676 6.512415 GCTGATTGCAGACGCTATTCTTATTT 60.512 38.462 0.00 0.00 45.17 1.40
676 677 6.948353 TGATTGCAGACGCTATTCTTATTTC 58.052 36.000 0.00 0.00 39.64 2.17
677 678 6.538381 TGATTGCAGACGCTATTCTTATTTCA 59.462 34.615 0.00 0.00 39.64 2.69
678 679 6.925610 TTGCAGACGCTATTCTTATTTCAT 57.074 33.333 0.00 0.00 39.64 2.57
679 680 8.607441 ATTGCAGACGCTATTCTTATTTCATA 57.393 30.769 0.00 0.00 39.64 2.15
680 681 7.408132 TGCAGACGCTATTCTTATTTCATAC 57.592 36.000 0.00 0.00 39.64 2.39
681 682 6.983890 TGCAGACGCTATTCTTATTTCATACA 59.016 34.615 0.00 0.00 39.64 2.29
682 683 7.657354 TGCAGACGCTATTCTTATTTCATACAT 59.343 33.333 0.00 0.00 39.64 2.29
683 684 8.165428 GCAGACGCTATTCTTATTTCATACATC 58.835 37.037 0.00 0.00 34.30 3.06
684 685 9.196552 CAGACGCTATTCTTATTTCATACATCA 57.803 33.333 0.00 0.00 0.00 3.07
685 686 9.764363 AGACGCTATTCTTATTTCATACATCAA 57.236 29.630 0.00 0.00 0.00 2.57
687 688 8.993121 ACGCTATTCTTATTTCATACATCAAGG 58.007 33.333 0.00 0.00 0.00 3.61
688 689 8.446273 CGCTATTCTTATTTCATACATCAAGGG 58.554 37.037 0.00 0.00 0.00 3.95
689 690 8.734386 GCTATTCTTATTTCATACATCAAGGGG 58.266 37.037 0.00 0.00 0.00 4.79
690 691 9.236006 CTATTCTTATTTCATACATCAAGGGGG 57.764 37.037 0.00 0.00 0.00 5.40
708 709 3.976015 GGGGGAAAGTACATCCAAATGA 58.024 45.455 16.76 0.00 38.80 2.57
709 710 4.349365 GGGGGAAAGTACATCCAAATGAA 58.651 43.478 16.76 0.00 38.80 2.57
710 711 4.402474 GGGGGAAAGTACATCCAAATGAAG 59.598 45.833 16.76 0.00 38.80 3.02
711 712 5.016831 GGGGAAAGTACATCCAAATGAAGT 58.983 41.667 16.76 0.00 38.80 3.01
712 713 6.184789 GGGGAAAGTACATCCAAATGAAGTA 58.815 40.000 16.76 0.00 38.80 2.24
713 714 6.661805 GGGGAAAGTACATCCAAATGAAGTAA 59.338 38.462 16.76 0.00 38.80 2.24
714 715 7.342026 GGGGAAAGTACATCCAAATGAAGTAAT 59.658 37.037 16.76 0.00 38.80 1.89
715 716 8.749354 GGGAAAGTACATCCAAATGAAGTAATT 58.251 33.333 16.76 0.00 37.13 1.40
771 772 4.632153 AGATGTTAATGTATGAGGTCCGC 58.368 43.478 0.00 0.00 0.00 5.54
799 800 1.003112 TGGCGGTTGGCGTAAATCT 60.003 52.632 0.00 0.00 44.92 2.40
887 891 4.552365 CCCGATGCCATCACGCCT 62.552 66.667 5.40 0.00 0.00 5.52
894 898 1.106944 TGCCATCACGCCTAGATCGA 61.107 55.000 10.57 0.00 0.00 3.59
897 901 1.413382 CATCACGCCTAGATCGAAGC 58.587 55.000 10.57 0.00 0.00 3.86
899 903 1.035385 TCACGCCTAGATCGAAGCCA 61.035 55.000 10.57 0.00 0.00 4.75
916 920 1.272212 GCCATCAAACACCAATCCGTT 59.728 47.619 0.00 0.00 0.00 4.44
919 923 2.649531 TCAAACACCAATCCGTTCCT 57.350 45.000 0.00 0.00 0.00 3.36
933 937 1.763968 GTTCCTTCCACCATAAGCCC 58.236 55.000 0.00 0.00 0.00 5.19
934 938 1.285078 GTTCCTTCCACCATAAGCCCT 59.715 52.381 0.00 0.00 0.00 5.19
945 951 3.181465 ACCATAAGCCCTGTAGTTCATCG 60.181 47.826 0.00 0.00 0.00 3.84
955 961 4.106029 TGTAGTTCATCGGTTCTACTGC 57.894 45.455 0.00 0.00 35.31 4.40
960 966 2.307768 TCATCGGTTCTACTGCTAGGG 58.692 52.381 0.00 0.00 0.00 3.53
961 967 2.032620 CATCGGTTCTACTGCTAGGGT 58.967 52.381 0.00 0.00 0.00 4.34
962 968 2.226962 TCGGTTCTACTGCTAGGGTT 57.773 50.000 0.00 0.00 0.00 4.11
963 969 2.532843 TCGGTTCTACTGCTAGGGTTT 58.467 47.619 0.00 0.00 0.00 3.27
983 989 0.605319 TTTCCTGTAGGTTGGCGCAG 60.605 55.000 10.83 0.00 36.34 5.18
994 1000 2.442272 GGCGCAGAGGGGAGTAGA 60.442 66.667 10.83 0.00 0.00 2.59
1029 1036 1.056700 TAGAGGGGCTCATGAAGGGC 61.057 60.000 0.00 0.00 32.06 5.19
1035 1042 1.549203 GGCTCATGAAGGGCTTGAAA 58.451 50.000 0.00 0.00 31.17 2.69
1077 1084 0.532573 GTCTGAAGATCGGGCAGTCA 59.467 55.000 10.77 0.00 0.00 3.41
1092 1099 1.830477 CAGTCAGAGAAGGGGAAGGAG 59.170 57.143 0.00 0.00 0.00 3.69
1104 1111 0.462759 GGAAGGAGAGTGAATGGGCG 60.463 60.000 0.00 0.00 0.00 6.13
1109 1116 4.778143 GAGTGAATGGGCGCCGGT 62.778 66.667 22.54 8.61 0.00 5.28
1159 1166 3.612247 GAGAAGCCGGCTCCTGCAA 62.612 63.158 32.93 0.00 41.91 4.08
1230 1237 2.111384 GATTGTAGGGAGCTGGAGACA 58.889 52.381 0.00 0.00 39.59 3.41
1242 1249 2.887152 GCTGGAGACAAATGTGTTCCTT 59.113 45.455 14.54 0.00 42.06 3.36
1250 1257 5.587043 AGACAAATGTGTTCCTTTTCACGTA 59.413 36.000 0.00 0.00 38.41 3.57
1254 1261 2.204237 GTGTTCCTTTTCACGTACCGT 58.796 47.619 0.00 0.00 42.36 4.83
1262 1269 2.157834 TTCACGTACCGTCAAGCATT 57.842 45.000 0.00 0.00 38.32 3.56
1312 1319 2.353406 CCGTGGTGGTTCGATAAAGAGT 60.353 50.000 0.00 0.00 0.00 3.24
1350 1357 3.056465 AGTTTGATCCAGAGAAGACGGTC 60.056 47.826 0.00 0.00 0.00 4.79
1353 1360 1.064357 GATCCAGAGAAGACGGTCGAC 59.936 57.143 7.13 7.13 0.00 4.20
1392 1399 1.574263 TCCCCATGTGGATTCGTGTA 58.426 50.000 0.00 0.00 37.39 2.90
1398 1405 3.489059 CCATGTGGATTCGTGTATTTGGC 60.489 47.826 0.00 0.00 37.39 4.52
1443 1450 1.817099 GACAGGAGAGCGCATTGGG 60.817 63.158 11.47 0.00 0.00 4.12
1477 1484 4.832248 TGATCTGGTTGAAGTGGATGTAC 58.168 43.478 0.00 0.00 0.00 2.90
1479 1486 2.028476 TCTGGTTGAAGTGGATGTACGG 60.028 50.000 0.00 0.00 0.00 4.02
1494 1501 2.717485 CGGCATGATGGAAAGGCG 59.283 61.111 0.00 0.00 43.34 5.52
1505 1512 1.228459 GAAAGGCGGTGGGGAAGTT 60.228 57.895 0.00 0.00 0.00 2.66
1527 1535 1.961793 TGCGTGTGAAGGTTAAGCTT 58.038 45.000 19.41 19.41 0.00 3.74
1536 1544 8.447833 CGTGTGAAGGTTAAGCTTGATATTAAA 58.552 33.333 23.83 0.00 0.00 1.52
1542 1550 8.521170 AGGTTAAGCTTGATATTAAAGAACCC 57.479 34.615 9.86 0.00 33.01 4.11
1595 1603 0.320508 AAGAAAGGGAAGGACGACGC 60.321 55.000 0.00 0.00 0.00 5.19
1623 1631 5.222254 GGAGATGGAGGTAATAGGAGAGACT 60.222 48.000 0.00 0.00 0.00 3.24
1645 1671 9.362151 AGACTAAGAAGAAGAAGAAGAAAGAGA 57.638 33.333 0.00 0.00 0.00 3.10
1686 1714 4.448210 AGTACGAATACATGCCGGATTTT 58.552 39.130 5.05 0.00 33.30 1.82
1707 1735 7.987750 TTTTTGCTATACTTGTGGTGTGATA 57.012 32.000 0.00 0.00 0.00 2.15
1722 1750 1.066430 GTGATAGGGCACGGTGAGAAA 60.066 52.381 13.29 0.00 0.00 2.52
1733 1761 2.029828 ACGGTGAGAAAGACTGCAGTAG 60.030 50.000 21.73 0.00 0.00 2.57
1734 1762 2.029828 CGGTGAGAAAGACTGCAGTAGT 60.030 50.000 21.73 7.44 44.02 2.73
1789 1817 0.033228 CATGGATGAGAGCGGAGGAC 59.967 60.000 0.00 0.00 0.00 3.85
1790 1818 1.118356 ATGGATGAGAGCGGAGGACC 61.118 60.000 0.00 0.00 0.00 4.46
1806 1834 1.000896 ACCGCAAATTGGGAGAGGG 60.001 57.895 11.79 0.00 31.21 4.30
1810 1838 0.625849 GCAAATTGGGAGAGGGAGGA 59.374 55.000 0.00 0.00 0.00 3.71
1812 1840 2.941480 CAAATTGGGAGAGGGAGGATG 58.059 52.381 0.00 0.00 0.00 3.51
1832 1860 1.566298 GCAGGGGAAGGGTCATGAGT 61.566 60.000 0.00 0.00 0.00 3.41
1837 1865 1.648467 GGAAGGGTCATGAGTTGCGC 61.648 60.000 0.00 0.00 0.00 6.09
1848 1876 2.048503 GTTGCGCGGAGGTAGTGT 60.049 61.111 8.83 0.00 0.00 3.55
1849 1877 2.092882 GTTGCGCGGAGGTAGTGTC 61.093 63.158 8.83 0.00 0.00 3.67
1870 1898 1.045911 GTAGGAGCTGGAGTGGAGGG 61.046 65.000 0.00 0.00 0.00 4.30
1873 1901 2.040278 AGCTGGAGTGGAGGGAGG 59.960 66.667 0.00 0.00 0.00 4.30
1909 1938 1.236026 AGTCCATGGGGAGTAGGGGA 61.236 60.000 13.02 0.00 45.30 4.81
1912 1941 1.345715 CCATGGGGAGTAGGGGACAC 61.346 65.000 2.85 0.00 35.59 3.67
1918 1947 1.527370 GAGTAGGGGACACCATGCC 59.473 63.158 0.00 0.00 43.89 4.40
1936 1965 1.002274 CTGGGGTAGAGGCTCAGGT 59.998 63.158 18.26 0.00 0.00 4.00
1951 1980 1.380112 AGGTAGCTCGGGGAGTGAC 60.380 63.158 0.00 0.00 31.39 3.67
1960 1989 3.399181 GGGAGTGACGGCCCATCA 61.399 66.667 10.99 0.00 44.07 3.07
1975 2004 2.511218 CCCATCATGGAGGAAGGAAGAA 59.489 50.000 4.75 0.00 40.96 2.52
1977 2006 3.549794 CATCATGGAGGAAGGAAGAACC 58.450 50.000 0.00 0.00 39.35 3.62
1986 2015 4.232091 AGGAAGGAAGAACCAGTGTCTAA 58.768 43.478 0.00 0.00 42.04 2.10
1990 2019 4.742012 AGGAAGAACCAGTGTCTAAGAGA 58.258 43.478 0.00 0.00 42.04 3.10
2008 2037 2.834549 GAGAGGTGACAAGATCTTGGGA 59.165 50.000 33.11 19.44 44.45 4.37
2052 2081 5.449862 CGAGTCCCTTAAAGATCACAGAGAG 60.450 48.000 0.00 0.00 0.00 3.20
2061 2090 8.789767 TTAAAGATCACAGAGAGGGAAGATAT 57.210 34.615 0.00 0.00 29.94 1.63
2071 2100 5.542251 AGAGAGGGAAGATATAGCAAGGAAC 59.458 44.000 0.00 0.00 0.00 3.62
2077 2106 5.921408 GGAAGATATAGCAAGGAACTGTACG 59.079 44.000 0.00 0.00 40.86 3.67
2089 2118 0.602905 ACTGTACGGCTGCAAAGTCC 60.603 55.000 0.23 0.00 0.00 3.85
2099 2128 3.494924 GGCTGCAAAGTCCCTTCAATTTT 60.495 43.478 0.50 0.00 0.00 1.82
2112 2141 4.461781 CCTTCAATTTTCTCCAGCATCTGT 59.538 41.667 0.00 0.00 0.00 3.41
2115 2144 6.500684 TCAATTTTCTCCAGCATCTGTTAC 57.499 37.500 0.00 0.00 0.00 2.50
2116 2145 6.003326 TCAATTTTCTCCAGCATCTGTTACA 58.997 36.000 0.00 0.00 0.00 2.41
2120 2149 4.623932 TCTCCAGCATCTGTTACAAGTT 57.376 40.909 0.00 0.00 0.00 2.66
2122 2151 3.325870 TCCAGCATCTGTTACAAGTTCG 58.674 45.455 0.00 0.00 0.00 3.95
2124 2153 2.416547 CAGCATCTGTTACAAGTTCGGG 59.583 50.000 0.00 0.00 0.00 5.14
2129 2158 2.367567 TCTGTTACAAGTTCGGGAAGCT 59.632 45.455 0.00 0.00 0.00 3.74
2142 2171 1.075536 GGGAAGCTTGGAAGGAAAGGA 59.924 52.381 2.10 0.00 0.00 3.36
2144 2173 2.040412 GGAAGCTTGGAAGGAAAGGAGA 59.960 50.000 2.10 0.00 0.00 3.71
2150 2179 2.921221 TGGAAGGAAAGGAGAGTGGAT 58.079 47.619 0.00 0.00 0.00 3.41
2152 2181 2.637947 GAAGGAAAGGAGAGTGGATGC 58.362 52.381 0.00 0.00 0.00 3.91
2164 2202 3.326006 AGAGTGGATGCAGAAGTGAAGAA 59.674 43.478 0.00 0.00 0.00 2.52
2168 2206 3.269178 GGATGCAGAAGTGAAGAAGGAG 58.731 50.000 0.00 0.00 0.00 3.69
2169 2207 2.847327 TGCAGAAGTGAAGAAGGAGG 57.153 50.000 0.00 0.00 0.00 4.30
2170 2208 2.329267 TGCAGAAGTGAAGAAGGAGGA 58.671 47.619 0.00 0.00 0.00 3.71
2175 2213 5.312079 CAGAAGTGAAGAAGGAGGAACAAT 58.688 41.667 0.00 0.00 0.00 2.71
2181 2219 3.463048 AGAAGGAGGAACAATTGGCAT 57.537 42.857 10.83 0.00 0.00 4.40
2208 2246 2.087646 TGGTGATGAGACAGTCGAGAG 58.912 52.381 0.00 0.00 0.00 3.20
2223 2261 1.614824 AGAGAGCAAGGGGTGGAGG 60.615 63.158 0.00 0.00 0.00 4.30
2224 2262 1.613630 GAGAGCAAGGGGTGGAGGA 60.614 63.158 0.00 0.00 0.00 3.71
2232 2270 4.035102 GGGTGGAGGACTGGGCAC 62.035 72.222 0.00 0.00 0.00 5.01
2257 2295 8.497745 ACCATTAACATTATCAAGGAGACAGAT 58.502 33.333 0.00 0.00 0.00 2.90
2260 2298 9.775854 ATTAACATTATCAAGGAGACAGATGAG 57.224 33.333 0.00 0.00 0.00 2.90
2264 2302 2.744760 TCAAGGAGACAGATGAGGAGG 58.255 52.381 0.00 0.00 0.00 4.30
2275 2313 1.238896 ATGAGGAGGGGGAGGGAAGA 61.239 60.000 0.00 0.00 0.00 2.87
2283 2321 0.253207 GGGGAGGGAAGAAAGGGAGA 60.253 60.000 0.00 0.00 0.00 3.71
2351 2398 1.294659 GAAGCACCGTGAGCCAAGAG 61.295 60.000 1.65 0.00 0.00 2.85
2368 2415 1.625818 AGAGCACAAGTGGGGTTAGAG 59.374 52.381 2.00 0.00 0.00 2.43
2380 2427 1.613520 GGGTTAGAGGTCAAGTTGGGC 60.614 57.143 2.34 0.00 0.00 5.36
2383 2430 3.219281 GTTAGAGGTCAAGTTGGGCAAA 58.781 45.455 2.34 0.00 0.00 3.68
2390 2437 0.752054 CAAGTTGGGCAAAAGGAGCA 59.248 50.000 0.00 0.00 0.00 4.26
2415 2462 3.767902 TGATATGGACATCGATGCCAA 57.232 42.857 31.40 23.64 37.46 4.52
2453 2500 8.740906 AGAAGAGTAGAACTATCAATGAAACGA 58.259 33.333 0.00 0.00 0.00 3.85
2454 2501 9.355215 GAAGAGTAGAACTATCAATGAAACGAA 57.645 33.333 0.00 0.00 0.00 3.85
2458 2505 8.088981 AGTAGAACTATCAATGAAACGAACAGT 58.911 33.333 0.00 0.00 0.00 3.55
2479 2526 2.202864 GAAGAGCAGCGAGAGGGC 60.203 66.667 0.00 0.00 0.00 5.19
2480 2527 2.999648 AAGAGCAGCGAGAGGGCA 61.000 61.111 0.00 0.00 34.64 5.36
2482 2529 2.280052 GAGCAGCGAGAGGGCATC 60.280 66.667 0.00 0.00 34.64 3.91
2483 2530 3.805891 GAGCAGCGAGAGGGCATCC 62.806 68.421 0.00 0.00 34.64 3.51
2520 2567 1.360192 GCAGGGTCAACACAACAGC 59.640 57.895 0.00 0.00 0.00 4.40
2521 2568 1.648720 CAGGGTCAACACAACAGCG 59.351 57.895 0.00 0.00 0.00 5.18
2530 2577 0.108377 ACACAACAGCGATATCGGCA 60.108 50.000 25.51 0.00 40.23 5.69
2576 2623 4.098349 GGGCACAATGAAAATCATCAGCTA 59.902 41.667 0.00 0.00 35.76 3.32
2589 2636 2.284699 AGCTAGAACTGCCGGGGT 60.285 61.111 2.18 0.00 0.00 4.95
2615 2662 3.561120 ATGGCCCGGCAGTTCGAAA 62.561 57.895 12.58 0.00 0.00 3.46
2643 2690 0.921256 AAATGGGGAGGGTGGAGGAG 60.921 60.000 0.00 0.00 0.00 3.69
2674 2721 3.437049 GCTGTTTTTAGCGGAGACAAGAT 59.563 43.478 0.00 0.00 33.46 2.40
2680 2727 0.108615 AGCGGAGACAAGATTGACGG 60.109 55.000 0.00 0.00 0.00 4.79
2708 2755 4.470304 GGAGTTGGATAGTCTAAGGTGGTT 59.530 45.833 0.00 0.00 0.00 3.67
2709 2756 5.420409 GAGTTGGATAGTCTAAGGTGGTTG 58.580 45.833 0.00 0.00 0.00 3.77
2718 2765 2.424842 TAAGGTGGTTGCTGGGGCTG 62.425 60.000 0.00 0.00 39.59 4.85
2727 2774 0.407528 TGCTGGGGCTGGTTCATTTA 59.592 50.000 0.00 0.00 39.59 1.40
2739 2786 4.415596 TGGTTCATTTACTTGCTTGGGAT 58.584 39.130 0.00 0.00 0.00 3.85
2767 2814 2.009042 GCAGAAGTAGAGGCATTGCGT 61.009 52.381 3.02 3.02 0.00 5.24
2772 2819 2.076863 AGTAGAGGCATTGCGTTGTTC 58.923 47.619 5.19 0.00 0.00 3.18
2784 2831 1.002011 GTTGTTCTGGAGGAGGGGC 60.002 63.158 0.00 0.00 0.00 5.80
2800 2847 4.116878 GCGTGGAGCTGGATCTTC 57.883 61.111 0.00 0.00 44.04 2.87
2811 2858 4.155709 AGCTGGATCTTCGATCTTATGGA 58.844 43.478 4.10 0.00 0.00 3.41
2830 2877 3.266772 TGGAAGGAGGCATGTAGATGTTT 59.733 43.478 1.37 0.00 31.50 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.862085 TCTCCAACGGTTTTTATTATCCTTTTT 58.138 29.630 0.00 0.00 0.00 1.94
28 29 8.301720 GTCTCCAACGGTTTTTATTATCCTTTT 58.698 33.333 0.00 0.00 0.00 2.27
29 30 7.094075 GGTCTCCAACGGTTTTTATTATCCTTT 60.094 37.037 0.00 0.00 0.00 3.11
30 31 6.376299 GGTCTCCAACGGTTTTTATTATCCTT 59.624 38.462 0.00 0.00 0.00 3.36
31 32 5.884232 GGTCTCCAACGGTTTTTATTATCCT 59.116 40.000 0.00 0.00 0.00 3.24
32 33 5.066893 GGGTCTCCAACGGTTTTTATTATCC 59.933 44.000 0.00 0.00 0.00 2.59
33 34 5.648960 TGGGTCTCCAACGGTTTTTATTATC 59.351 40.000 0.00 0.00 40.73 1.75
34 35 5.572252 TGGGTCTCCAACGGTTTTTATTAT 58.428 37.500 0.00 0.00 40.73 1.28
35 36 4.983053 TGGGTCTCCAACGGTTTTTATTA 58.017 39.130 0.00 0.00 40.73 0.98
36 37 3.834938 TGGGTCTCCAACGGTTTTTATT 58.165 40.909 0.00 0.00 40.73 1.40
37 38 3.512219 TGGGTCTCCAACGGTTTTTAT 57.488 42.857 0.00 0.00 40.73 1.40
39 40 3.907458 TGGGTCTCCAACGGTTTTT 57.093 47.368 0.00 0.00 40.73 1.94
88 89 3.685139 TCTGAGGCTCCAGTTTTACTG 57.315 47.619 12.86 0.00 45.53 2.74
89 90 3.391296 TGTTCTGAGGCTCCAGTTTTACT 59.609 43.478 12.86 0.00 35.71 2.24
90 91 3.740115 TGTTCTGAGGCTCCAGTTTTAC 58.260 45.455 12.86 7.75 35.71 2.01
91 92 4.431416 TTGTTCTGAGGCTCCAGTTTTA 57.569 40.909 12.86 0.00 35.71 1.52
92 93 3.297134 TTGTTCTGAGGCTCCAGTTTT 57.703 42.857 12.86 0.00 35.71 2.43
93 94 3.515602 ATTGTTCTGAGGCTCCAGTTT 57.484 42.857 12.86 0.00 35.71 2.66
94 95 4.042187 AGTTATTGTTCTGAGGCTCCAGTT 59.958 41.667 12.86 0.00 35.71 3.16
95 96 3.584848 AGTTATTGTTCTGAGGCTCCAGT 59.415 43.478 12.86 1.97 35.71 4.00
96 97 3.937706 CAGTTATTGTTCTGAGGCTCCAG 59.062 47.826 12.86 9.62 34.02 3.86
97 98 3.307691 CCAGTTATTGTTCTGAGGCTCCA 60.308 47.826 12.86 0.00 34.02 3.86
98 99 3.055094 TCCAGTTATTGTTCTGAGGCTCC 60.055 47.826 12.86 0.00 34.02 4.70
99 100 3.935828 GTCCAGTTATTGTTCTGAGGCTC 59.064 47.826 7.79 7.79 34.02 4.70
100 101 3.307762 GGTCCAGTTATTGTTCTGAGGCT 60.308 47.826 0.00 0.00 34.02 4.58
101 102 3.010420 GGTCCAGTTATTGTTCTGAGGC 58.990 50.000 0.00 0.00 34.02 4.70
102 103 3.262420 CGGTCCAGTTATTGTTCTGAGG 58.738 50.000 0.00 0.00 34.02 3.86
103 104 3.262420 CCGGTCCAGTTATTGTTCTGAG 58.738 50.000 0.00 0.00 34.02 3.35
104 105 2.027561 CCCGGTCCAGTTATTGTTCTGA 60.028 50.000 0.00 0.00 34.02 3.27
105 106 2.356135 CCCGGTCCAGTTATTGTTCTG 58.644 52.381 0.00 0.00 0.00 3.02
106 107 1.339727 GCCCGGTCCAGTTATTGTTCT 60.340 52.381 0.00 0.00 0.00 3.01
107 108 1.092348 GCCCGGTCCAGTTATTGTTC 58.908 55.000 0.00 0.00 0.00 3.18
108 109 0.323087 GGCCCGGTCCAGTTATTGTT 60.323 55.000 0.00 0.00 0.00 2.83
109 110 1.301954 GGCCCGGTCCAGTTATTGT 59.698 57.895 0.00 0.00 0.00 2.71
110 111 0.322997 TTGGCCCGGTCCAGTTATTG 60.323 55.000 3.53 0.00 37.44 1.90
111 112 0.034477 CTTGGCCCGGTCCAGTTATT 60.034 55.000 3.53 0.00 37.44 1.40
112 113 0.912487 TCTTGGCCCGGTCCAGTTAT 60.912 55.000 3.53 0.00 37.44 1.89
113 114 1.536907 TCTTGGCCCGGTCCAGTTA 60.537 57.895 3.53 0.00 37.44 2.24
114 115 2.852075 TCTTGGCCCGGTCCAGTT 60.852 61.111 3.53 0.00 37.44 3.16
115 116 3.322466 CTCTTGGCCCGGTCCAGT 61.322 66.667 3.53 0.00 37.44 4.00
116 117 4.785453 GCTCTTGGCCCGGTCCAG 62.785 72.222 3.53 0.00 37.44 3.86
117 118 3.916438 TAGCTCTTGGCCCGGTCCA 62.916 63.158 0.00 0.00 43.05 4.02
118 119 3.081409 TAGCTCTTGGCCCGGTCC 61.081 66.667 0.00 0.00 43.05 4.46
119 120 2.359967 ACTAGCTCTTGGCCCGGTC 61.360 63.158 0.00 0.00 43.05 4.79
120 121 2.284699 ACTAGCTCTTGGCCCGGT 60.285 61.111 0.00 0.00 43.05 5.28
121 122 2.187946 CACTAGCTCTTGGCCCGG 59.812 66.667 0.00 0.00 43.05 5.73
122 123 2.512515 GCACTAGCTCTTGGCCCG 60.513 66.667 0.00 0.00 43.05 6.13
145 146 1.022451 TCAAATAGTCGCCCCAACGC 61.022 55.000 0.00 0.00 0.00 4.84
146 147 0.725117 GTCAAATAGTCGCCCCAACG 59.275 55.000 0.00 0.00 0.00 4.10
147 148 0.725117 CGTCAAATAGTCGCCCCAAC 59.275 55.000 0.00 0.00 0.00 3.77
148 149 0.391927 CCGTCAAATAGTCGCCCCAA 60.392 55.000 0.00 0.00 0.00 4.12
149 150 1.219664 CCGTCAAATAGTCGCCCCA 59.780 57.895 0.00 0.00 0.00 4.96
150 151 0.106149 ATCCGTCAAATAGTCGCCCC 59.894 55.000 0.00 0.00 0.00 5.80
151 152 1.217882 CATCCGTCAAATAGTCGCCC 58.782 55.000 0.00 0.00 0.00 6.13
152 153 1.593006 CACATCCGTCAAATAGTCGCC 59.407 52.381 0.00 0.00 0.00 5.54
153 154 2.535984 CTCACATCCGTCAAATAGTCGC 59.464 50.000 0.00 0.00 0.00 5.19
154 155 2.535984 GCTCACATCCGTCAAATAGTCG 59.464 50.000 0.00 0.00 0.00 4.18
155 156 2.535984 CGCTCACATCCGTCAAATAGTC 59.464 50.000 0.00 0.00 0.00 2.59
156 157 2.094182 ACGCTCACATCCGTCAAATAGT 60.094 45.455 0.00 0.00 31.00 2.12
157 158 2.540515 ACGCTCACATCCGTCAAATAG 58.459 47.619 0.00 0.00 31.00 1.73
158 159 2.665649 ACGCTCACATCCGTCAAATA 57.334 45.000 0.00 0.00 31.00 1.40
159 160 1.732259 GAACGCTCACATCCGTCAAAT 59.268 47.619 0.00 0.00 36.56 2.32
160 161 1.144969 GAACGCTCACATCCGTCAAA 58.855 50.000 0.00 0.00 36.56 2.69
161 162 1.006825 CGAACGCTCACATCCGTCAA 61.007 55.000 0.00 0.00 36.56 3.18
162 163 1.443702 CGAACGCTCACATCCGTCA 60.444 57.895 0.00 0.00 36.56 4.35
163 164 0.731514 TTCGAACGCTCACATCCGTC 60.732 55.000 0.00 0.00 36.56 4.79
164 165 0.319211 TTTCGAACGCTCACATCCGT 60.319 50.000 0.00 0.00 39.70 4.69
165 166 0.787787 TTTTCGAACGCTCACATCCG 59.212 50.000 0.00 0.00 0.00 4.18
166 167 1.798813 ACTTTTCGAACGCTCACATCC 59.201 47.619 0.00 0.00 0.00 3.51
167 168 4.640805 TTACTTTTCGAACGCTCACATC 57.359 40.909 0.00 0.00 0.00 3.06
168 169 5.607119 AATTACTTTTCGAACGCTCACAT 57.393 34.783 0.00 0.00 0.00 3.21
169 170 6.715344 ATAATTACTTTTCGAACGCTCACA 57.285 33.333 0.00 0.00 0.00 3.58
170 171 6.464834 CCAATAATTACTTTTCGAACGCTCAC 59.535 38.462 0.00 0.00 0.00 3.51
171 172 6.402766 CCCAATAATTACTTTTCGAACGCTCA 60.403 38.462 0.00 0.00 0.00 4.26
172 173 5.963586 CCCAATAATTACTTTTCGAACGCTC 59.036 40.000 0.00 0.00 0.00 5.03
173 174 5.644636 TCCCAATAATTACTTTTCGAACGCT 59.355 36.000 0.00 0.00 0.00 5.07
174 175 5.871539 TCCCAATAATTACTTTTCGAACGC 58.128 37.500 0.00 0.00 0.00 4.84
175 176 8.905103 ATTTCCCAATAATTACTTTTCGAACG 57.095 30.769 0.00 0.00 0.00 3.95
204 205 8.739972 GCTTTCCAGTAATTTCCTCTCAAATTA 58.260 33.333 0.00 0.00 37.23 1.40
205 206 7.233348 TGCTTTCCAGTAATTTCCTCTCAAATT 59.767 33.333 0.00 0.00 39.01 1.82
206 207 6.721208 TGCTTTCCAGTAATTTCCTCTCAAAT 59.279 34.615 0.00 0.00 0.00 2.32
207 208 6.068010 TGCTTTCCAGTAATTTCCTCTCAAA 58.932 36.000 0.00 0.00 0.00 2.69
208 209 5.630121 TGCTTTCCAGTAATTTCCTCTCAA 58.370 37.500 0.00 0.00 0.00 3.02
209 210 5.241403 TGCTTTCCAGTAATTTCCTCTCA 57.759 39.130 0.00 0.00 0.00 3.27
210 211 6.765915 AATGCTTTCCAGTAATTTCCTCTC 57.234 37.500 0.00 0.00 0.00 3.20
211 212 8.829373 ATTAATGCTTTCCAGTAATTTCCTCT 57.171 30.769 0.00 0.00 40.66 3.69
212 213 8.138074 GGATTAATGCTTTCCAGTAATTTCCTC 58.862 37.037 0.00 0.00 42.78 3.71
213 214 7.841222 AGGATTAATGCTTTCCAGTAATTTCCT 59.159 33.333 3.24 0.00 42.78 3.36
214 215 8.011844 AGGATTAATGCTTTCCAGTAATTTCC 57.988 34.615 3.24 0.00 42.78 3.13
215 216 9.875691 AAAGGATTAATGCTTTCCAGTAATTTC 57.124 29.630 24.42 0.00 43.61 2.17
244 245 7.615365 TCTTAACGTTACAATTAGGGTCTCCTA 59.385 37.037 7.70 0.00 44.38 2.94
245 246 6.438425 TCTTAACGTTACAATTAGGGTCTCCT 59.562 38.462 7.70 0.00 46.96 3.69
246 247 6.633856 TCTTAACGTTACAATTAGGGTCTCC 58.366 40.000 7.70 0.00 0.00 3.71
247 248 6.755607 CCTCTTAACGTTACAATTAGGGTCTC 59.244 42.308 7.70 0.00 0.00 3.36
248 249 6.438425 TCCTCTTAACGTTACAATTAGGGTCT 59.562 38.462 7.70 0.00 0.00 3.85
249 250 6.633856 TCCTCTTAACGTTACAATTAGGGTC 58.366 40.000 7.70 0.00 0.00 4.46
250 251 6.610075 TCCTCTTAACGTTACAATTAGGGT 57.390 37.500 7.70 0.00 0.00 4.34
251 252 7.605309 ACTTTCCTCTTAACGTTACAATTAGGG 59.395 37.037 7.70 2.07 0.00 3.53
252 253 8.543862 ACTTTCCTCTTAACGTTACAATTAGG 57.456 34.615 7.70 10.22 0.00 2.69
254 255 9.143631 GCTACTTTCCTCTTAACGTTACAATTA 57.856 33.333 7.70 0.00 0.00 1.40
255 256 7.118825 GGCTACTTTCCTCTTAACGTTACAATT 59.881 37.037 7.70 0.00 0.00 2.32
256 257 6.592994 GGCTACTTTCCTCTTAACGTTACAAT 59.407 38.462 7.70 0.00 0.00 2.71
257 258 5.928264 GGCTACTTTCCTCTTAACGTTACAA 59.072 40.000 7.70 0.00 0.00 2.41
258 259 5.010922 TGGCTACTTTCCTCTTAACGTTACA 59.989 40.000 7.70 0.00 0.00 2.41
259 260 5.473039 TGGCTACTTTCCTCTTAACGTTAC 58.527 41.667 7.70 0.00 0.00 2.50
260 261 5.726980 TGGCTACTTTCCTCTTAACGTTA 57.273 39.130 3.29 3.29 0.00 3.18
261 262 4.612264 TGGCTACTTTCCTCTTAACGTT 57.388 40.909 5.88 5.88 0.00 3.99
262 263 4.282703 TCTTGGCTACTTTCCTCTTAACGT 59.717 41.667 0.00 0.00 0.00 3.99
263 264 4.626172 GTCTTGGCTACTTTCCTCTTAACG 59.374 45.833 0.00 0.00 0.00 3.18
264 265 4.936411 GGTCTTGGCTACTTTCCTCTTAAC 59.064 45.833 0.00 0.00 0.00 2.01
265 266 4.019591 GGGTCTTGGCTACTTTCCTCTTAA 60.020 45.833 0.00 0.00 0.00 1.85
266 267 3.518303 GGGTCTTGGCTACTTTCCTCTTA 59.482 47.826 0.00 0.00 0.00 2.10
267 268 2.306219 GGGTCTTGGCTACTTTCCTCTT 59.694 50.000 0.00 0.00 0.00 2.85
268 269 1.909986 GGGTCTTGGCTACTTTCCTCT 59.090 52.381 0.00 0.00 0.00 3.69
269 270 1.628846 TGGGTCTTGGCTACTTTCCTC 59.371 52.381 0.00 0.00 0.00 3.71
270 271 1.630878 CTGGGTCTTGGCTACTTTCCT 59.369 52.381 0.00 0.00 0.00 3.36
271 272 1.340114 CCTGGGTCTTGGCTACTTTCC 60.340 57.143 0.00 0.00 0.00 3.13
272 273 1.340114 CCCTGGGTCTTGGCTACTTTC 60.340 57.143 3.97 0.00 0.00 2.62
273 274 0.698818 CCCTGGGTCTTGGCTACTTT 59.301 55.000 3.97 0.00 0.00 2.66
274 275 0.475828 ACCCTGGGTCTTGGCTACTT 60.476 55.000 14.05 0.00 0.00 2.24
275 276 1.161113 ACCCTGGGTCTTGGCTACT 59.839 57.895 14.05 0.00 0.00 2.57
276 277 3.821886 ACCCTGGGTCTTGGCTAC 58.178 61.111 14.05 0.00 0.00 3.58
285 286 1.940242 AAACCAAACCGACCCTGGGT 61.940 55.000 20.72 20.72 40.20 4.51
286 287 1.152631 AAACCAAACCGACCCTGGG 60.153 57.895 12.28 12.28 34.31 4.45
287 288 0.753848 ACAAACCAAACCGACCCTGG 60.754 55.000 0.00 0.00 36.24 4.45
288 289 0.383949 CACAAACCAAACCGACCCTG 59.616 55.000 0.00 0.00 0.00 4.45
289 290 0.753848 CCACAAACCAAACCGACCCT 60.754 55.000 0.00 0.00 0.00 4.34
290 291 1.737201 CCACAAACCAAACCGACCC 59.263 57.895 0.00 0.00 0.00 4.46
291 292 1.066752 GCCACAAACCAAACCGACC 59.933 57.895 0.00 0.00 0.00 4.79
292 293 0.458260 AAGCCACAAACCAAACCGAC 59.542 50.000 0.00 0.00 0.00 4.79
293 294 0.457851 CAAGCCACAAACCAAACCGA 59.542 50.000 0.00 0.00 0.00 4.69
294 295 1.151172 GCAAGCCACAAACCAAACCG 61.151 55.000 0.00 0.00 0.00 4.44
295 296 0.813610 GGCAAGCCACAAACCAAACC 60.814 55.000 6.14 0.00 35.81 3.27
296 297 0.813610 GGGCAAGCCACAAACCAAAC 60.814 55.000 13.87 0.00 37.98 2.93
297 298 1.524482 GGGCAAGCCACAAACCAAA 59.476 52.632 13.87 0.00 37.98 3.28
298 299 2.439104 GGGGCAAGCCACAAACCAA 61.439 57.895 13.87 0.00 39.85 3.67
299 300 2.841988 GGGGCAAGCCACAAACCA 60.842 61.111 13.87 0.00 39.85 3.67
300 301 2.524148 AGGGGCAAGCCACAAACC 60.524 61.111 16.83 5.66 43.35 3.27
301 302 1.685355 AACAGGGGCAAGCCACAAAC 61.685 55.000 16.83 0.00 43.35 2.93
302 303 1.382420 AACAGGGGCAAGCCACAAA 60.382 52.632 16.83 0.00 43.35 2.83
303 304 2.132996 CAACAGGGGCAAGCCACAA 61.133 57.895 16.83 0.00 43.35 3.33
304 305 2.521465 CAACAGGGGCAAGCCACA 60.521 61.111 16.83 0.00 43.35 4.17
305 306 3.994853 GCAACAGGGGCAAGCCAC 61.995 66.667 13.87 9.75 40.57 5.01
308 309 3.688159 CAGGCAACAGGGGCAAGC 61.688 66.667 0.00 0.00 41.41 4.01
309 310 2.993264 CCAGGCAACAGGGGCAAG 60.993 66.667 0.00 0.00 40.18 4.01
310 311 3.080158 TTCCAGGCAACAGGGGCAA 62.080 57.895 0.00 0.00 44.98 4.52
311 312 3.506743 TTCCAGGCAACAGGGGCA 61.507 61.111 0.00 0.00 44.98 5.36
312 313 2.991540 GTTCCAGGCAACAGGGGC 60.992 66.667 0.00 0.00 44.98 5.80
313 314 0.469892 AAAGTTCCAGGCAACAGGGG 60.470 55.000 5.03 0.00 44.98 4.79
314 315 1.069049 CAAAAGTTCCAGGCAACAGGG 59.931 52.381 5.03 0.00 44.98 4.45
315 316 1.756538 ACAAAAGTTCCAGGCAACAGG 59.243 47.619 5.03 0.00 46.62 4.00
316 317 2.166254 ACACAAAAGTTCCAGGCAACAG 59.834 45.455 5.03 0.00 41.41 3.16
317 318 2.175202 ACACAAAAGTTCCAGGCAACA 58.825 42.857 5.03 0.00 41.41 3.33
318 319 2.929398 CAACACAAAAGTTCCAGGCAAC 59.071 45.455 0.00 0.00 0.00 4.17
319 320 2.676463 GCAACACAAAAGTTCCAGGCAA 60.676 45.455 0.00 0.00 0.00 4.52
320 321 1.134848 GCAACACAAAAGTTCCAGGCA 60.135 47.619 0.00 0.00 0.00 4.75
321 322 1.134848 TGCAACACAAAAGTTCCAGGC 60.135 47.619 0.00 0.00 0.00 4.85
322 323 2.957491 TGCAACACAAAAGTTCCAGG 57.043 45.000 0.00 0.00 0.00 4.45
323 324 3.125316 CCATGCAACACAAAAGTTCCAG 58.875 45.455 0.00 0.00 0.00 3.86
324 325 2.741228 GCCATGCAACACAAAAGTTCCA 60.741 45.455 0.00 0.00 0.00 3.53
325 326 1.866601 GCCATGCAACACAAAAGTTCC 59.133 47.619 0.00 0.00 0.00 3.62
326 327 1.522258 CGCCATGCAACACAAAAGTTC 59.478 47.619 0.00 0.00 0.00 3.01
327 328 1.134848 ACGCCATGCAACACAAAAGTT 60.135 42.857 0.00 0.00 0.00 2.66
328 329 0.459489 ACGCCATGCAACACAAAAGT 59.541 45.000 0.00 0.00 0.00 2.66
329 330 2.414058 TACGCCATGCAACACAAAAG 57.586 45.000 0.00 0.00 0.00 2.27
330 331 3.668226 CGTATACGCCATGCAACACAAAA 60.668 43.478 13.08 0.00 0.00 2.44
331 332 2.159639 CGTATACGCCATGCAACACAAA 60.160 45.455 13.08 0.00 0.00 2.83
332 333 1.395262 CGTATACGCCATGCAACACAA 59.605 47.619 13.08 0.00 0.00 3.33
333 334 1.003108 CGTATACGCCATGCAACACA 58.997 50.000 13.08 0.00 0.00 3.72
334 335 3.798506 CGTATACGCCATGCAACAC 57.201 52.632 13.08 0.00 0.00 3.32
354 355 5.204292 AGCCTAATCAGGAAGGAAAATTCC 58.796 41.667 3.93 3.93 45.91 3.01
355 356 7.012799 CACTAGCCTAATCAGGAAGGAAAATTC 59.987 40.741 0.00 0.00 45.91 2.17
356 357 6.830838 CACTAGCCTAATCAGGAAGGAAAATT 59.169 38.462 0.00 0.00 45.91 1.82
357 358 6.360618 CACTAGCCTAATCAGGAAGGAAAAT 58.639 40.000 0.00 0.00 45.91 1.82
358 359 5.745227 CACTAGCCTAATCAGGAAGGAAAA 58.255 41.667 0.00 0.00 45.91 2.29
359 360 4.384208 GCACTAGCCTAATCAGGAAGGAAA 60.384 45.833 0.00 0.00 45.91 3.13
360 361 3.134804 GCACTAGCCTAATCAGGAAGGAA 59.865 47.826 0.00 0.00 45.91 3.36
361 362 2.700897 GCACTAGCCTAATCAGGAAGGA 59.299 50.000 0.00 0.00 45.91 3.36
362 363 2.435805 TGCACTAGCCTAATCAGGAAGG 59.564 50.000 0.00 0.00 45.91 3.46
363 364 3.386078 TCTGCACTAGCCTAATCAGGAAG 59.614 47.826 0.00 0.00 45.91 3.46
364 365 3.374764 TCTGCACTAGCCTAATCAGGAA 58.625 45.455 0.00 0.00 45.91 3.36
365 366 3.032265 TCTGCACTAGCCTAATCAGGA 57.968 47.619 0.00 0.00 45.91 3.86
366 367 4.617067 CGTATCTGCACTAGCCTAATCAGG 60.617 50.000 0.00 0.00 45.77 3.86
367 368 4.216472 TCGTATCTGCACTAGCCTAATCAG 59.784 45.833 0.00 0.00 41.13 2.90
368 369 4.142038 TCGTATCTGCACTAGCCTAATCA 58.858 43.478 0.00 0.00 41.13 2.57
369 370 4.768130 TCGTATCTGCACTAGCCTAATC 57.232 45.455 0.00 0.00 41.13 1.75
370 371 4.559704 GCTTCGTATCTGCACTAGCCTAAT 60.560 45.833 0.00 0.00 41.13 1.73
371 372 3.243434 GCTTCGTATCTGCACTAGCCTAA 60.243 47.826 0.00 0.00 41.13 2.69
372 373 2.293677 GCTTCGTATCTGCACTAGCCTA 59.706 50.000 0.00 0.00 41.13 3.93
373 374 1.067821 GCTTCGTATCTGCACTAGCCT 59.932 52.381 0.00 0.00 41.13 4.58
374 375 1.202417 TGCTTCGTATCTGCACTAGCC 60.202 52.381 0.00 0.00 41.13 3.93
375 376 2.209838 TGCTTCGTATCTGCACTAGC 57.790 50.000 0.00 0.00 42.57 3.42
376 377 4.025396 CCAAATGCTTCGTATCTGCACTAG 60.025 45.833 0.00 0.00 39.63 2.57
377 378 3.871006 CCAAATGCTTCGTATCTGCACTA 59.129 43.478 0.00 0.00 39.63 2.74
378 379 2.679837 CCAAATGCTTCGTATCTGCACT 59.320 45.455 0.00 0.00 39.63 4.40
379 380 2.420022 ACCAAATGCTTCGTATCTGCAC 59.580 45.455 0.00 0.00 39.63 4.57
380 381 2.710377 ACCAAATGCTTCGTATCTGCA 58.290 42.857 0.00 0.00 41.13 4.41
381 382 3.764885 AACCAAATGCTTCGTATCTGC 57.235 42.857 0.00 0.00 0.00 4.26
382 383 4.082787 ACCAAACCAAATGCTTCGTATCTG 60.083 41.667 0.00 0.00 0.00 2.90
383 384 4.079253 ACCAAACCAAATGCTTCGTATCT 58.921 39.130 0.00 0.00 0.00 1.98
384 385 4.412207 GACCAAACCAAATGCTTCGTATC 58.588 43.478 0.00 0.00 0.00 2.24
385 386 3.192633 GGACCAAACCAAATGCTTCGTAT 59.807 43.478 0.00 0.00 0.00 3.06
386 387 2.554893 GGACCAAACCAAATGCTTCGTA 59.445 45.455 0.00 0.00 0.00 3.43
387 388 1.339929 GGACCAAACCAAATGCTTCGT 59.660 47.619 0.00 0.00 0.00 3.85
388 389 1.336795 GGGACCAAACCAAATGCTTCG 60.337 52.381 0.00 0.00 0.00 3.79
389 390 1.970640 AGGGACCAAACCAAATGCTTC 59.029 47.619 0.00 0.00 0.00 3.86
390 391 1.693606 CAGGGACCAAACCAAATGCTT 59.306 47.619 0.00 0.00 0.00 3.91
391 392 1.341080 CAGGGACCAAACCAAATGCT 58.659 50.000 0.00 0.00 0.00 3.79
392 393 0.321346 CCAGGGACCAAACCAAATGC 59.679 55.000 0.00 0.00 0.00 3.56
393 394 0.321346 GCCAGGGACCAAACCAAATG 59.679 55.000 0.00 0.00 0.00 2.32
394 395 0.835971 GGCCAGGGACCAAACCAAAT 60.836 55.000 0.00 0.00 0.00 2.32
395 396 1.458588 GGCCAGGGACCAAACCAAA 60.459 57.895 0.00 0.00 0.00 3.28
396 397 2.200092 GGCCAGGGACCAAACCAA 59.800 61.111 0.00 0.00 0.00 3.67
397 398 2.780924 AGGCCAGGGACCAAACCA 60.781 61.111 5.01 0.00 0.00 3.67
398 399 2.283173 CAGGCCAGGGACCAAACC 60.283 66.667 5.01 0.00 0.00 3.27
399 400 1.785353 TACCAGGCCAGGGACCAAAC 61.785 60.000 19.81 0.00 0.00 2.93
400 401 1.068943 TTACCAGGCCAGGGACCAAA 61.069 55.000 19.81 1.85 0.00 3.28
401 402 1.068943 TTTACCAGGCCAGGGACCAA 61.069 55.000 19.81 0.00 0.00 3.67
402 403 1.464395 TTTACCAGGCCAGGGACCA 60.464 57.895 19.81 0.00 0.00 4.02
403 404 1.303282 CTTTACCAGGCCAGGGACC 59.697 63.158 19.81 0.00 0.00 4.46
404 405 1.378646 GCTTTACCAGGCCAGGGAC 60.379 63.158 19.81 0.00 0.00 4.46
405 406 2.612493 GGCTTTACCAGGCCAGGGA 61.612 63.158 19.81 7.19 46.84 4.20
406 407 2.043953 GGCTTTACCAGGCCAGGG 60.044 66.667 19.81 15.53 46.84 4.45
412 413 1.439679 GACGTTGAGGCTTTACCAGG 58.560 55.000 0.00 0.00 43.14 4.45
413 414 1.002087 AGGACGTTGAGGCTTTACCAG 59.998 52.381 0.00 0.00 43.14 4.00
414 415 1.053424 AGGACGTTGAGGCTTTACCA 58.947 50.000 0.00 0.00 43.14 3.25
415 416 3.118884 TGATAGGACGTTGAGGCTTTACC 60.119 47.826 0.00 0.00 39.61 2.85
416 417 3.864003 GTGATAGGACGTTGAGGCTTTAC 59.136 47.826 0.00 0.00 0.00 2.01
417 418 3.428452 CGTGATAGGACGTTGAGGCTTTA 60.428 47.826 0.00 0.00 34.56 1.85
418 419 2.674177 CGTGATAGGACGTTGAGGCTTT 60.674 50.000 0.00 0.00 34.56 3.51
419 420 1.135083 CGTGATAGGACGTTGAGGCTT 60.135 52.381 0.00 0.00 34.56 4.35
420 421 0.456221 CGTGATAGGACGTTGAGGCT 59.544 55.000 0.00 0.00 34.56 4.58
421 422 0.527817 CCGTGATAGGACGTTGAGGC 60.528 60.000 0.00 0.00 37.66 4.70
422 423 0.815734 ACCGTGATAGGACGTTGAGG 59.184 55.000 0.00 0.00 37.66 3.86
423 424 1.469251 CCACCGTGATAGGACGTTGAG 60.469 57.143 0.00 0.00 33.96 3.02
424 425 0.528924 CCACCGTGATAGGACGTTGA 59.471 55.000 0.00 0.00 33.96 3.18
425 426 0.528924 TCCACCGTGATAGGACGTTG 59.471 55.000 0.00 0.00 37.66 4.10
426 427 0.529378 GTCCACCGTGATAGGACGTT 59.471 55.000 0.00 0.00 42.02 3.99
427 428 2.187073 GTCCACCGTGATAGGACGT 58.813 57.895 0.00 0.00 42.02 4.34
430 431 3.323774 AATAGGTCCACCGTGATAGGA 57.676 47.619 0.00 0.00 42.08 2.94
431 432 4.417426 AAAATAGGTCCACCGTGATAGG 57.583 45.455 0.00 0.00 42.08 2.57
451 452 6.267471 AGCCTGGATGAATGTTGAACTAAAAA 59.733 34.615 0.00 0.00 0.00 1.94
452 453 5.774690 AGCCTGGATGAATGTTGAACTAAAA 59.225 36.000 0.00 0.00 0.00 1.52
453 454 5.183713 CAGCCTGGATGAATGTTGAACTAAA 59.816 40.000 5.94 0.00 0.00 1.85
454 455 4.701651 CAGCCTGGATGAATGTTGAACTAA 59.298 41.667 5.94 0.00 0.00 2.24
455 456 4.264253 CAGCCTGGATGAATGTTGAACTA 58.736 43.478 5.94 0.00 0.00 2.24
456 457 3.087031 CAGCCTGGATGAATGTTGAACT 58.913 45.455 5.94 0.00 0.00 3.01
457 458 2.416431 GCAGCCTGGATGAATGTTGAAC 60.416 50.000 17.53 0.00 0.00 3.18
458 459 1.820519 GCAGCCTGGATGAATGTTGAA 59.179 47.619 17.53 0.00 0.00 2.69
459 460 1.005097 AGCAGCCTGGATGAATGTTGA 59.995 47.619 17.53 0.00 0.00 3.18
460 461 1.471119 AGCAGCCTGGATGAATGTTG 58.529 50.000 17.53 0.00 0.00 3.33
461 462 3.589951 ATAGCAGCCTGGATGAATGTT 57.410 42.857 17.53 0.00 0.00 2.71
462 463 3.589951 AATAGCAGCCTGGATGAATGT 57.410 42.857 17.53 0.00 0.00 2.71
463 464 5.624344 CTAAATAGCAGCCTGGATGAATG 57.376 43.478 17.53 0.00 0.00 2.67
478 479 0.792640 CGCGGCCAGATGCTAAATAG 59.207 55.000 2.24 0.00 40.92 1.73
479 480 0.105964 ACGCGGCCAGATGCTAAATA 59.894 50.000 12.47 0.00 40.92 1.40
480 481 1.153168 ACGCGGCCAGATGCTAAAT 60.153 52.632 12.47 0.00 40.92 1.40
481 482 2.106074 CACGCGGCCAGATGCTAAA 61.106 57.895 12.47 0.00 40.92 1.85
482 483 2.511373 CACGCGGCCAGATGCTAA 60.511 61.111 12.47 0.00 40.92 3.09
507 508 3.692406 AGGCCACCTCGTTCCGAC 61.692 66.667 5.01 0.00 0.00 4.79
508 509 3.691342 CAGGCCACCTCGTTCCGA 61.691 66.667 5.01 0.00 0.00 4.55
509 510 4.760047 CCAGGCCACCTCGTTCCG 62.760 72.222 5.01 0.00 0.00 4.30
523 524 3.004752 AGTTGTAATTAGCCTGGCCAG 57.995 47.619 26.87 26.87 0.00 4.85
524 525 3.684413 GCTAGTTGTAATTAGCCTGGCCA 60.684 47.826 16.57 4.71 38.02 5.36
525 526 2.879026 GCTAGTTGTAATTAGCCTGGCC 59.121 50.000 16.57 0.00 38.02 5.36
526 527 3.541632 TGCTAGTTGTAATTAGCCTGGC 58.458 45.455 11.65 11.65 41.80 4.85
527 528 4.130118 CCTGCTAGTTGTAATTAGCCTGG 58.870 47.826 14.11 12.41 41.80 4.45
528 529 4.770795 ACCTGCTAGTTGTAATTAGCCTG 58.229 43.478 14.11 9.00 41.80 4.85
529 530 5.897824 TCTACCTGCTAGTTGTAATTAGCCT 59.102 40.000 14.11 2.96 41.80 4.58
530 531 6.158023 TCTACCTGCTAGTTGTAATTAGCC 57.842 41.667 14.11 1.15 41.80 3.93
531 532 6.702282 CCTTCTACCTGCTAGTTGTAATTAGC 59.298 42.308 10.97 10.97 42.52 3.09
532 533 6.702282 GCCTTCTACCTGCTAGTTGTAATTAG 59.298 42.308 0.00 0.00 0.00 1.73
533 534 6.579865 GCCTTCTACCTGCTAGTTGTAATTA 58.420 40.000 0.00 0.00 0.00 1.40
534 535 5.429130 GCCTTCTACCTGCTAGTTGTAATT 58.571 41.667 0.00 0.00 0.00 1.40
535 536 4.441634 CGCCTTCTACCTGCTAGTTGTAAT 60.442 45.833 0.00 0.00 0.00 1.89
536 537 3.119245 CGCCTTCTACCTGCTAGTTGTAA 60.119 47.826 0.00 0.00 0.00 2.41
537 538 2.426024 CGCCTTCTACCTGCTAGTTGTA 59.574 50.000 0.00 0.00 0.00 2.41
538 539 1.204941 CGCCTTCTACCTGCTAGTTGT 59.795 52.381 0.00 0.00 0.00 3.32
539 540 1.927895 CGCCTTCTACCTGCTAGTTG 58.072 55.000 0.00 0.00 0.00 3.16
540 541 0.175989 GCGCCTTCTACCTGCTAGTT 59.824 55.000 0.00 0.00 0.00 2.24
541 542 1.677637 GGCGCCTTCTACCTGCTAGT 61.678 60.000 22.15 0.00 0.00 2.57
542 543 1.068250 GGCGCCTTCTACCTGCTAG 59.932 63.158 22.15 0.00 0.00 3.42
543 544 2.782222 CGGCGCCTTCTACCTGCTA 61.782 63.158 26.68 0.00 0.00 3.49
544 545 4.148825 CGGCGCCTTCTACCTGCT 62.149 66.667 26.68 0.00 0.00 4.24
564 565 3.554692 CTCAATCACGGTCGCGGC 61.555 66.667 6.13 3.04 0.00 6.53
565 566 3.554692 GCTCAATCACGGTCGCGG 61.555 66.667 6.13 0.00 0.00 6.46
566 567 3.554692 GGCTCAATCACGGTCGCG 61.555 66.667 0.00 0.00 0.00 5.87
567 568 3.195698 GGGCTCAATCACGGTCGC 61.196 66.667 0.00 0.00 0.00 5.19
568 569 2.885644 CGGGCTCAATCACGGTCG 60.886 66.667 0.00 0.00 0.00 4.79
569 570 2.100631 CACGGGCTCAATCACGGTC 61.101 63.158 0.00 0.00 0.00 4.79
570 571 2.047274 CACGGGCTCAATCACGGT 60.047 61.111 0.00 0.00 0.00 4.83
571 572 3.499737 GCACGGGCTCAATCACGG 61.500 66.667 0.00 0.00 36.96 4.94
572 573 3.853330 CGCACGGGCTCAATCACG 61.853 66.667 8.62 0.00 38.10 4.35
573 574 0.810031 ATACGCACGGGCTCAATCAC 60.810 55.000 8.62 0.00 38.10 3.06
574 575 0.809636 CATACGCACGGGCTCAATCA 60.810 55.000 8.62 0.00 38.10 2.57
575 576 0.810031 ACATACGCACGGGCTCAATC 60.810 55.000 8.62 0.00 38.10 2.67
576 577 1.089481 CACATACGCACGGGCTCAAT 61.089 55.000 8.62 0.00 38.10 2.57
577 578 1.739929 CACATACGCACGGGCTCAA 60.740 57.895 8.62 0.00 38.10 3.02
578 579 2.125713 CACATACGCACGGGCTCA 60.126 61.111 8.62 0.00 38.10 4.26
579 580 1.296056 AAACACATACGCACGGGCTC 61.296 55.000 8.62 0.00 38.10 4.70
580 581 1.302192 AAACACATACGCACGGGCT 60.302 52.632 8.62 0.00 38.10 5.19
581 582 1.154301 CAAACACATACGCACGGGC 60.154 57.895 0.00 0.00 0.00 6.13
582 583 0.589223 AACAAACACATACGCACGGG 59.411 50.000 0.00 0.00 0.00 5.28
583 584 2.392933 AAACAAACACATACGCACGG 57.607 45.000 0.00 0.00 0.00 4.94
603 604 9.822727 ACCCCTTCTCTTATTTCAAAATAGAAA 57.177 29.630 0.00 0.00 41.31 2.52
604 605 9.243105 CACCCCTTCTCTTATTTCAAAATAGAA 57.757 33.333 0.00 0.00 32.87 2.10
605 606 7.834181 CCACCCCTTCTCTTATTTCAAAATAGA 59.166 37.037 0.00 0.00 32.87 1.98
606 607 7.615757 ACCACCCCTTCTCTTATTTCAAAATAG 59.384 37.037 0.00 0.00 32.87 1.73
607 608 7.396055 CACCACCCCTTCTCTTATTTCAAAATA 59.604 37.037 0.00 0.00 0.00 1.40
608 609 6.211384 CACCACCCCTTCTCTTATTTCAAAAT 59.789 38.462 0.00 0.00 0.00 1.82
609 610 5.538433 CACCACCCCTTCTCTTATTTCAAAA 59.462 40.000 0.00 0.00 0.00 2.44
610 611 5.076873 CACCACCCCTTCTCTTATTTCAAA 58.923 41.667 0.00 0.00 0.00 2.69
611 612 4.508405 CCACCACCCCTTCTCTTATTTCAA 60.508 45.833 0.00 0.00 0.00 2.69
612 613 3.010138 CCACCACCCCTTCTCTTATTTCA 59.990 47.826 0.00 0.00 0.00 2.69
613 614 3.010250 ACCACCACCCCTTCTCTTATTTC 59.990 47.826 0.00 0.00 0.00 2.17
614 615 2.993863 ACCACCACCCCTTCTCTTATTT 59.006 45.455 0.00 0.00 0.00 1.40
615 616 2.644151 ACCACCACCCCTTCTCTTATT 58.356 47.619 0.00 0.00 0.00 1.40
616 617 2.361085 ACCACCACCCCTTCTCTTAT 57.639 50.000 0.00 0.00 0.00 1.73
617 618 2.113052 ACTACCACCACCCCTTCTCTTA 59.887 50.000 0.00 0.00 0.00 2.10
618 619 1.132495 ACTACCACCACCCCTTCTCTT 60.132 52.381 0.00 0.00 0.00 2.85
619 620 0.492276 ACTACCACCACCCCTTCTCT 59.508 55.000 0.00 0.00 0.00 3.10
620 621 1.829849 GTACTACCACCACCCCTTCTC 59.170 57.143 0.00 0.00 0.00 2.87
621 622 1.150560 TGTACTACCACCACCCCTTCT 59.849 52.381 0.00 0.00 0.00 2.85
622 623 1.553704 CTGTACTACCACCACCCCTTC 59.446 57.143 0.00 0.00 0.00 3.46
623 624 1.150560 TCTGTACTACCACCACCCCTT 59.849 52.381 0.00 0.00 0.00 3.95
624 625 0.788383 TCTGTACTACCACCACCCCT 59.212 55.000 0.00 0.00 0.00 4.79
625 626 1.192428 CTCTGTACTACCACCACCCC 58.808 60.000 0.00 0.00 0.00 4.95
626 627 1.192428 CCTCTGTACTACCACCACCC 58.808 60.000 0.00 0.00 0.00 4.61
627 628 1.823610 GACCTCTGTACTACCACCACC 59.176 57.143 0.00 0.00 0.00 4.61
628 629 1.471684 CGACCTCTGTACTACCACCAC 59.528 57.143 0.00 0.00 0.00 4.16
629 630 1.352017 TCGACCTCTGTACTACCACCA 59.648 52.381 0.00 0.00 0.00 4.17
630 631 2.015587 CTCGACCTCTGTACTACCACC 58.984 57.143 0.00 0.00 0.00 4.61
631 632 1.401199 GCTCGACCTCTGTACTACCAC 59.599 57.143 0.00 0.00 0.00 4.16
632 633 1.281287 AGCTCGACCTCTGTACTACCA 59.719 52.381 0.00 0.00 0.00 3.25
633 634 1.671845 CAGCTCGACCTCTGTACTACC 59.328 57.143 0.00 0.00 0.00 3.18
634 635 2.630158 TCAGCTCGACCTCTGTACTAC 58.370 52.381 0.00 0.00 0.00 2.73
635 636 3.562343 ATCAGCTCGACCTCTGTACTA 57.438 47.619 0.00 0.00 0.00 1.82
636 637 2.425312 CAATCAGCTCGACCTCTGTACT 59.575 50.000 0.00 0.00 0.00 2.73
637 638 2.803451 CAATCAGCTCGACCTCTGTAC 58.197 52.381 0.00 0.00 0.00 2.90
638 639 1.135139 GCAATCAGCTCGACCTCTGTA 59.865 52.381 0.00 0.00 41.15 2.74
639 640 0.108424 GCAATCAGCTCGACCTCTGT 60.108 55.000 0.00 0.00 41.15 3.41
640 641 0.108472 TGCAATCAGCTCGACCTCTG 60.108 55.000 0.00 0.00 45.94 3.35
641 642 0.175302 CTGCAATCAGCTCGACCTCT 59.825 55.000 0.00 0.00 45.94 3.69
642 643 0.174389 TCTGCAATCAGCTCGACCTC 59.826 55.000 0.00 0.00 45.94 3.85
643 644 0.108424 GTCTGCAATCAGCTCGACCT 60.108 55.000 0.00 0.00 45.94 3.85
644 645 1.416813 CGTCTGCAATCAGCTCGACC 61.417 60.000 0.00 0.00 45.94 4.79
645 646 1.994467 CGTCTGCAATCAGCTCGAC 59.006 57.895 0.00 0.00 45.94 4.20
646 647 1.807165 GCGTCTGCAATCAGCTCGA 60.807 57.895 11.39 0.00 45.94 4.04
647 648 0.526310 TAGCGTCTGCAATCAGCTCG 60.526 55.000 8.57 0.00 46.23 5.03
648 649 1.863267 ATAGCGTCTGCAATCAGCTC 58.137 50.000 8.57 0.00 46.23 4.09
649 650 2.158986 AGAATAGCGTCTGCAATCAGCT 60.159 45.455 9.90 9.90 46.23 4.24
650 651 2.208431 AGAATAGCGTCTGCAATCAGC 58.792 47.619 0.00 0.00 46.23 4.26
651 652 6.536731 AATAAGAATAGCGTCTGCAATCAG 57.463 37.500 0.00 0.00 46.23 2.90
652 653 6.538381 TGAAATAAGAATAGCGTCTGCAATCA 59.462 34.615 0.00 0.00 46.23 2.57
653 654 6.948353 TGAAATAAGAATAGCGTCTGCAATC 58.052 36.000 0.00 0.00 46.23 2.67
654 655 6.925610 TGAAATAAGAATAGCGTCTGCAAT 57.074 33.333 0.00 0.00 46.23 3.56
655 656 6.925610 ATGAAATAAGAATAGCGTCTGCAA 57.074 33.333 0.00 0.00 46.23 4.08
656 657 6.983890 TGTATGAAATAAGAATAGCGTCTGCA 59.016 34.615 0.00 0.00 46.23 4.41
657 658 7.408132 TGTATGAAATAAGAATAGCGTCTGC 57.592 36.000 0.00 0.00 43.24 4.26
658 659 9.196552 TGATGTATGAAATAAGAATAGCGTCTG 57.803 33.333 0.00 0.00 0.00 3.51
659 660 9.764363 TTGATGTATGAAATAAGAATAGCGTCT 57.236 29.630 0.00 0.00 0.00 4.18
661 662 8.993121 CCTTGATGTATGAAATAAGAATAGCGT 58.007 33.333 0.00 0.00 0.00 5.07
662 663 8.446273 CCCTTGATGTATGAAATAAGAATAGCG 58.554 37.037 0.00 0.00 0.00 4.26
663 664 8.734386 CCCCTTGATGTATGAAATAAGAATAGC 58.266 37.037 0.00 0.00 0.00 2.97
664 665 9.236006 CCCCCTTGATGTATGAAATAAGAATAG 57.764 37.037 0.00 0.00 0.00 1.73
687 688 3.976015 TCATTTGGATGTACTTTCCCCC 58.024 45.455 11.45 0.00 34.77 5.40
688 689 5.016831 ACTTCATTTGGATGTACTTTCCCC 58.983 41.667 11.45 0.00 32.56 4.81
689 690 7.696992 TTACTTCATTTGGATGTACTTTCCC 57.303 36.000 11.45 1.03 36.28 3.97
744 745 9.273016 CGGACCTCATACATTAACATCTTATTT 57.727 33.333 0.00 0.00 0.00 1.40
745 746 7.387948 GCGGACCTCATACATTAACATCTTATT 59.612 37.037 0.00 0.00 0.00 1.40
746 747 6.874134 GCGGACCTCATACATTAACATCTTAT 59.126 38.462 0.00 0.00 0.00 1.73
747 748 6.220930 GCGGACCTCATACATTAACATCTTA 58.779 40.000 0.00 0.00 0.00 2.10
748 749 5.057149 GCGGACCTCATACATTAACATCTT 58.943 41.667 0.00 0.00 0.00 2.40
749 750 4.503296 GGCGGACCTCATACATTAACATCT 60.503 45.833 0.00 0.00 0.00 2.90
750 751 3.746492 GGCGGACCTCATACATTAACATC 59.254 47.826 0.00 0.00 0.00 3.06
751 752 3.496160 GGGCGGACCTCATACATTAACAT 60.496 47.826 0.00 0.00 35.85 2.71
752 753 2.158871 GGGCGGACCTCATACATTAACA 60.159 50.000 0.00 0.00 35.85 2.41
753 754 2.490991 GGGCGGACCTCATACATTAAC 58.509 52.381 0.00 0.00 35.85 2.01
754 755 1.418637 GGGGCGGACCTCATACATTAA 59.581 52.381 0.00 0.00 35.91 1.40
755 756 1.053424 GGGGCGGACCTCATACATTA 58.947 55.000 0.00 0.00 35.91 1.90
756 757 0.694444 AGGGGCGGACCTCATACATT 60.694 55.000 0.00 0.00 39.93 2.71
757 758 0.694444 AAGGGGCGGACCTCATACAT 60.694 55.000 0.00 0.00 39.93 2.29
758 759 0.031917 TAAGGGGCGGACCTCATACA 60.032 55.000 0.00 0.00 39.93 2.29
759 760 0.391966 GTAAGGGGCGGACCTCATAC 59.608 60.000 0.00 0.00 39.93 2.39
760 761 1.111116 CGTAAGGGGCGGACCTCATA 61.111 60.000 0.00 0.00 39.93 2.15
761 762 2.432300 CGTAAGGGGCGGACCTCAT 61.432 63.158 0.00 0.00 39.93 2.90
762 763 3.072468 CGTAAGGGGCGGACCTCA 61.072 66.667 0.00 0.00 39.93 3.86
799 800 3.309436 CTCCCAATCGCCACACCGA 62.309 63.158 0.00 0.00 41.98 4.69
887 891 3.055458 TGGTGTTTGATGGCTTCGATCTA 60.055 43.478 0.00 0.00 0.00 1.98
894 898 1.545582 CGGATTGGTGTTTGATGGCTT 59.454 47.619 0.00 0.00 0.00 4.35
897 901 2.094752 GGAACGGATTGGTGTTTGATGG 60.095 50.000 0.00 0.00 0.00 3.51
899 903 3.154827 AGGAACGGATTGGTGTTTGAT 57.845 42.857 0.00 0.00 0.00 2.57
916 920 0.918983 CAGGGCTTATGGTGGAAGGA 59.081 55.000 0.00 0.00 0.00 3.36
919 923 2.557869 ACTACAGGGCTTATGGTGGAA 58.442 47.619 0.00 0.00 0.00 3.53
933 937 4.106197 GCAGTAGAACCGATGAACTACAG 58.894 47.826 0.00 0.00 38.02 2.74
934 938 3.762288 AGCAGTAGAACCGATGAACTACA 59.238 43.478 0.00 0.00 38.02 2.74
962 968 0.955905 GCGCCAACCTACAGGAAAAA 59.044 50.000 1.29 0.00 38.94 1.94
963 969 0.179015 TGCGCCAACCTACAGGAAAA 60.179 50.000 4.18 0.00 38.94 2.29
976 982 2.759973 CTACTCCCCTCTGCGCCA 60.760 66.667 4.18 0.00 0.00 5.69
983 989 2.178106 TCCATCTCCTTCTACTCCCCTC 59.822 54.545 0.00 0.00 0.00 4.30
994 1000 3.439260 CCCTCTACATCCTCCATCTCCTT 60.439 52.174 0.00 0.00 0.00 3.36
1029 1036 1.636340 CGCCGCCGATAGTTTCAAG 59.364 57.895 0.00 0.00 36.29 3.02
1051 1058 0.665835 CCGATCTTCAGACCTCTCCG 59.334 60.000 0.00 0.00 0.00 4.63
1077 1084 1.719378 TCACTCTCCTTCCCCTTCTCT 59.281 52.381 0.00 0.00 0.00 3.10
1092 1099 4.778143 ACCGGCGCCCATTCACTC 62.778 66.667 23.46 0.00 0.00 3.51
1104 1111 1.675641 AGCTTGTGGATCAACCGGC 60.676 57.895 0.00 2.19 42.61 6.13
1122 1129 6.684613 GCTTCTCCGATAGTAATTTACCCACA 60.685 42.308 2.92 0.00 0.00 4.17
1159 1166 2.590575 CGTTTGTCCCACCGCACT 60.591 61.111 0.00 0.00 0.00 4.40
1163 1170 2.548295 CCCAACGTTTGTCCCACCG 61.548 63.158 0.00 0.00 0.00 4.94
1217 1224 1.271597 ACACATTTGTCTCCAGCTCCC 60.272 52.381 0.00 0.00 0.00 4.30
1230 1237 5.177725 GGTACGTGAAAAGGAACACATTT 57.822 39.130 0.00 0.00 36.91 2.32
1250 1257 0.680921 CCATCCCAATGCTTGACGGT 60.681 55.000 0.00 0.00 0.00 4.83
1254 1261 1.213678 CTCCTCCATCCCAATGCTTGA 59.786 52.381 0.00 0.00 0.00 3.02
1262 1269 4.843331 GGGCCCTCCTCCATCCCA 62.843 72.222 17.04 0.00 36.96 4.37
1312 1319 4.724399 TCAAACTCCTCCATAACAAGCAA 58.276 39.130 0.00 0.00 0.00 3.91
1350 1357 3.092135 CAGATTGAACTCGTACTCGTCG 58.908 50.000 0.00 0.00 38.33 5.12
1353 1360 4.283678 GGATCAGATTGAACTCGTACTCG 58.716 47.826 0.00 0.00 38.55 4.18
1437 1444 2.449464 TCATGAAAGTCAGCCCCAATG 58.551 47.619 0.00 0.00 0.00 2.82
1443 1450 2.996631 ACCAGATCATGAAAGTCAGCC 58.003 47.619 0.00 0.00 0.00 4.85
1477 1484 2.717485 CGCCTTTCCATCATGCCG 59.283 61.111 0.00 0.00 0.00 5.69
1479 1486 1.434696 CACCGCCTTTCCATCATGC 59.565 57.895 0.00 0.00 0.00 4.06
1494 1501 0.249280 CACGCAAAAACTTCCCCACC 60.249 55.000 0.00 0.00 0.00 4.61
1505 1512 2.685897 AGCTTAACCTTCACACGCAAAA 59.314 40.909 0.00 0.00 0.00 2.44
1527 1535 8.213679 CCTCTCATCAAGGGTTCTTTAATATCA 58.786 37.037 0.00 0.00 0.00 2.15
1536 1544 4.141158 ACAAAACCTCTCATCAAGGGTTCT 60.141 41.667 0.00 0.00 43.11 3.01
1542 1550 4.276678 TCAAGCACAAAACCTCTCATCAAG 59.723 41.667 0.00 0.00 0.00 3.02
1595 1603 3.093057 CCTATTACCTCCATCTCCTCCG 58.907 54.545 0.00 0.00 0.00 4.63
1645 1671 3.476552 ACTCAAATCGACACCACAACAT 58.523 40.909 0.00 0.00 0.00 2.71
1686 1714 5.396324 CCCTATCACACCACAAGTATAGCAA 60.396 44.000 0.00 0.00 0.00 3.91
1707 1735 1.122019 AGTCTTTCTCACCGTGCCCT 61.122 55.000 0.00 0.00 0.00 5.19
1722 1750 6.188407 TCTGATAGGTTTACTACTGCAGTCT 58.812 40.000 25.56 14.72 38.80 3.24
1733 1761 3.004944 CGCCTCTCCTCTGATAGGTTTAC 59.995 52.174 0.00 0.00 46.62 2.01
1734 1762 3.223435 CGCCTCTCCTCTGATAGGTTTA 58.777 50.000 0.00 0.00 46.62 2.01
1762 1790 1.097232 CTCTCATCCATGCGCCAAAA 58.903 50.000 4.18 0.00 0.00 2.44
1769 1797 1.301558 CCTCCGCTCTCATCCATGC 60.302 63.158 0.00 0.00 0.00 4.06
1783 1811 1.001393 TCCCAATTTGCGGTCCTCC 60.001 57.895 0.00 0.00 0.00 4.30
1789 1817 0.749454 CTCCCTCTCCCAATTTGCGG 60.749 60.000 0.00 0.00 0.00 5.69
1790 1818 0.749454 CCTCCCTCTCCCAATTTGCG 60.749 60.000 0.00 0.00 0.00 4.85
1806 1834 2.761465 CCCTTCCCCTGCCATCCTC 61.761 68.421 0.00 0.00 0.00 3.71
1810 1838 1.623686 ATGACCCTTCCCCTGCCAT 60.624 57.895 0.00 0.00 0.00 4.40
1812 1840 2.276309 CTCATGACCCTTCCCCTGCC 62.276 65.000 0.00 0.00 0.00 4.85
1832 1860 2.260434 GACACTACCTCCGCGCAA 59.740 61.111 8.75 0.00 0.00 4.85
1837 1865 2.290464 CTCCTACTGACACTACCTCCG 58.710 57.143 0.00 0.00 0.00 4.63
1848 1876 0.704664 TCCACTCCAGCTCCTACTGA 59.295 55.000 0.00 0.00 40.25 3.41
1849 1877 1.110442 CTCCACTCCAGCTCCTACTG 58.890 60.000 0.00 0.00 37.42 2.74
1870 1898 2.442272 TAGCGAGTGCCTCCCCTC 60.442 66.667 0.00 0.00 44.31 4.30
1873 1901 3.075005 TGGTAGCGAGTGCCTCCC 61.075 66.667 0.00 0.00 44.31 4.30
1891 1919 1.054978 GTCCCCTACTCCCCATGGAC 61.055 65.000 15.22 0.00 35.03 4.02
1909 1938 1.229820 TCTACCCCAGGCATGGTGT 60.230 57.895 17.55 14.26 46.10 4.16
1918 1947 0.261991 TACCTGAGCCTCTACCCCAG 59.738 60.000 0.00 0.00 0.00 4.45
1930 1959 1.076632 ACTCCCCGAGCTACCTGAG 60.077 63.158 0.00 0.00 32.04 3.35
1936 1965 2.439701 CCGTCACTCCCCGAGCTA 60.440 66.667 0.00 0.00 32.04 3.32
1945 1974 1.524621 CCATGATGGGCCGTCACTC 60.525 63.158 29.91 2.59 31.87 3.51
1951 1980 1.228063 CTTCCTCCATGATGGGCCG 60.228 63.158 12.26 0.61 38.32 6.13
1960 1989 2.307098 CACTGGTTCTTCCTTCCTCCAT 59.693 50.000 0.00 0.00 37.07 3.41
1975 2004 3.158676 GTCACCTCTCTTAGACACTGGT 58.841 50.000 0.00 0.00 0.00 4.00
1977 2006 4.520874 TCTTGTCACCTCTCTTAGACACTG 59.479 45.833 0.00 0.00 40.37 3.66
1986 2015 2.836981 CCCAAGATCTTGTCACCTCTCT 59.163 50.000 29.03 0.00 38.85 3.10
1990 2019 1.912043 CCTCCCAAGATCTTGTCACCT 59.088 52.381 29.03 0.00 38.85 4.00
2008 2037 1.229658 CACCTCCTGTTCCCCTCCT 60.230 63.158 0.00 0.00 0.00 3.69
2052 2081 5.297569 ACAGTTCCTTGCTATATCTTCCC 57.702 43.478 0.00 0.00 0.00 3.97
2061 2090 1.067142 CAGCCGTACAGTTCCTTGCTA 60.067 52.381 0.00 0.00 0.00 3.49
2071 2100 1.298859 GGGACTTTGCAGCCGTACAG 61.299 60.000 0.00 0.00 0.00 2.74
2072 2101 1.302192 GGGACTTTGCAGCCGTACA 60.302 57.895 0.00 0.00 0.00 2.90
2089 2118 4.461781 ACAGATGCTGGAGAAAATTGAAGG 59.538 41.667 0.00 0.00 35.51 3.46
2099 2128 4.569943 GAACTTGTAACAGATGCTGGAGA 58.430 43.478 0.00 0.00 35.51 3.71
2112 2141 2.105134 TCCAAGCTTCCCGAACTTGTAA 59.895 45.455 0.00 4.82 39.30 2.41
2115 2144 1.537202 CTTCCAAGCTTCCCGAACTTG 59.463 52.381 0.00 10.36 40.36 3.16
2116 2145 1.545651 CCTTCCAAGCTTCCCGAACTT 60.546 52.381 0.00 0.00 0.00 2.66
2120 2149 0.768622 TTTCCTTCCAAGCTTCCCGA 59.231 50.000 0.00 0.00 0.00 5.14
2122 2151 1.075536 TCCTTTCCTTCCAAGCTTCCC 59.924 52.381 0.00 0.00 0.00 3.97
2124 2153 3.244735 ACTCTCCTTTCCTTCCAAGCTTC 60.245 47.826 0.00 0.00 0.00 3.86
2129 2158 2.701551 TCCACTCTCCTTTCCTTCCAA 58.298 47.619 0.00 0.00 0.00 3.53
2142 2171 2.902486 TCTTCACTTCTGCATCCACTCT 59.098 45.455 0.00 0.00 0.00 3.24
2144 2173 3.558746 CCTTCTTCACTTCTGCATCCACT 60.559 47.826 0.00 0.00 0.00 4.00
2150 2179 2.329267 TCCTCCTTCTTCACTTCTGCA 58.671 47.619 0.00 0.00 0.00 4.41
2152 2181 4.342862 TGTTCCTCCTTCTTCACTTCTG 57.657 45.455 0.00 0.00 0.00 3.02
2164 2202 2.450476 GTGATGCCAATTGTTCCTCCT 58.550 47.619 4.43 0.00 0.00 3.69
2196 2234 1.173043 CCTTGCTCTCTCGACTGTCT 58.827 55.000 6.21 0.00 0.00 3.41
2198 2236 1.254284 CCCCTTGCTCTCTCGACTGT 61.254 60.000 0.00 0.00 0.00 3.55
2199 2237 1.254284 ACCCCTTGCTCTCTCGACTG 61.254 60.000 0.00 0.00 0.00 3.51
2202 2240 1.984570 CCACCCCTTGCTCTCTCGA 60.985 63.158 0.00 0.00 0.00 4.04
2208 2246 1.920835 AGTCCTCCACCCCTTGCTC 60.921 63.158 0.00 0.00 0.00 4.26
2223 2261 4.887071 TGATAATGTTAATGGTGCCCAGTC 59.113 41.667 0.00 0.00 36.75 3.51
2224 2262 4.865905 TGATAATGTTAATGGTGCCCAGT 58.134 39.130 0.41 0.22 36.75 4.00
2232 2270 8.781196 CATCTGTCTCCTTGATAATGTTAATGG 58.219 37.037 0.00 0.00 0.00 3.16
2233 2271 9.551734 TCATCTGTCTCCTTGATAATGTTAATG 57.448 33.333 0.00 0.00 0.00 1.90
2234 2272 9.775854 CTCATCTGTCTCCTTGATAATGTTAAT 57.224 33.333 0.00 0.00 0.00 1.40
2235 2273 8.206867 CCTCATCTGTCTCCTTGATAATGTTAA 58.793 37.037 0.00 0.00 0.00 2.01
2236 2274 7.565029 TCCTCATCTGTCTCCTTGATAATGTTA 59.435 37.037 0.00 0.00 0.00 2.41
2237 2275 6.385176 TCCTCATCTGTCTCCTTGATAATGTT 59.615 38.462 0.00 0.00 0.00 2.71
2238 2276 5.901853 TCCTCATCTGTCTCCTTGATAATGT 59.098 40.000 0.00 0.00 0.00 2.71
2239 2277 6.416631 TCCTCATCTGTCTCCTTGATAATG 57.583 41.667 0.00 0.00 0.00 1.90
2257 2295 1.460839 TTCTTCCCTCCCCCTCCTCA 61.461 60.000 0.00 0.00 0.00 3.86
2260 2298 1.282653 CCTTTCTTCCCTCCCCCTCC 61.283 65.000 0.00 0.00 0.00 4.30
2264 2302 0.253207 TCTCCCTTTCTTCCCTCCCC 60.253 60.000 0.00 0.00 0.00 4.81
2275 2313 1.464198 AGCCACTGGGTCTCCCTTT 60.464 57.895 6.38 0.00 45.70 3.11
2283 2321 1.004745 CTCCATTTACAGCCACTGGGT 59.995 52.381 0.00 0.00 35.51 4.51
2289 2327 4.385199 CCTGATAACCTCCATTTACAGCCA 60.385 45.833 0.00 0.00 0.00 4.75
2292 2330 4.446311 CCCCCTGATAACCTCCATTTACAG 60.446 50.000 0.00 0.00 0.00 2.74
2351 2398 0.400594 ACCTCTAACCCCACTTGTGC 59.599 55.000 0.00 0.00 0.00 4.57
2353 2400 2.112279 TGACCTCTAACCCCACTTGT 57.888 50.000 0.00 0.00 0.00 3.16
2368 2415 1.341209 CTCCTTTTGCCCAACTTGACC 59.659 52.381 0.00 0.00 0.00 4.02
2380 2427 5.469421 GTCCATATCATCTCTGCTCCTTTTG 59.531 44.000 0.00 0.00 0.00 2.44
2383 2430 4.229639 TGTCCATATCATCTCTGCTCCTT 58.770 43.478 0.00 0.00 0.00 3.36
2390 2437 4.141981 GGCATCGATGTCCATATCATCTCT 60.142 45.833 25.47 0.00 39.36 3.10
2415 2462 7.736893 AGTTCTACTCTTCTTTACACCATTGT 58.263 34.615 0.00 0.00 40.02 2.71
2435 2482 6.147821 CCACTGTTCGTTTCATTGATAGTTCT 59.852 38.462 0.00 0.00 0.00 3.01
2443 2490 3.961477 TCACCACTGTTCGTTTCATTG 57.039 42.857 0.00 0.00 0.00 2.82
2451 2498 1.143305 CTGCTCTTCACCACTGTTCG 58.857 55.000 0.00 0.00 0.00 3.95
2453 2500 0.882042 CGCTGCTCTTCACCACTGTT 60.882 55.000 0.00 0.00 0.00 3.16
2454 2501 1.301244 CGCTGCTCTTCACCACTGT 60.301 57.895 0.00 0.00 0.00 3.55
2458 2505 1.588597 CTCTCGCTGCTCTTCACCA 59.411 57.895 0.00 0.00 0.00 4.17
2479 2526 4.019860 CCCATGTTATCTGTAGAGGGGATG 60.020 50.000 0.00 0.00 34.97 3.51
2480 2527 4.171234 CCCATGTTATCTGTAGAGGGGAT 58.829 47.826 0.00 0.00 34.97 3.85
2482 2529 2.039084 GCCCATGTTATCTGTAGAGGGG 59.961 54.545 0.00 0.00 35.58 4.79
2483 2530 2.705658 TGCCCATGTTATCTGTAGAGGG 59.294 50.000 0.00 0.00 38.10 4.30
2485 2532 3.244353 CCCTGCCCATGTTATCTGTAGAG 60.244 52.174 0.00 0.00 0.00 2.43
2576 2623 3.382832 CGAGACCCCGGCAGTTCT 61.383 66.667 0.00 0.00 0.00 3.01
2643 2690 2.599659 GCTAAAAACAGCACATCAGGC 58.400 47.619 0.00 0.00 41.40 4.85
2674 2721 0.178944 TCCAACTCCCTCTCCGTCAA 60.179 55.000 0.00 0.00 0.00 3.18
2680 2727 4.830600 CCTTAGACTATCCAACTCCCTCTC 59.169 50.000 0.00 0.00 0.00 3.20
2708 2755 0.407528 TAAATGAACCAGCCCCAGCA 59.592 50.000 0.00 0.00 43.56 4.41
2709 2756 0.817654 GTAAATGAACCAGCCCCAGC 59.182 55.000 0.00 0.00 40.32 4.85
2718 2765 4.142160 GGATCCCAAGCAAGTAAATGAACC 60.142 45.833 0.00 0.00 0.00 3.62
2727 2774 1.604378 CTCCGGATCCCAAGCAAGT 59.396 57.895 3.57 0.00 0.00 3.16
2739 2786 0.395862 CTCTACTTCTGCCCTCCGGA 60.396 60.000 2.93 2.93 0.00 5.14
2767 2814 2.592993 CGCCCCTCCTCCAGAACAA 61.593 63.158 0.00 0.00 0.00 2.83
2784 2831 0.387202 ATCGAAGATCCAGCTCCACG 59.613 55.000 0.00 0.00 45.12 4.94
2791 2838 5.244851 TCCTTCCATAAGATCGAAGATCCAG 59.755 44.000 8.39 0.00 45.12 3.86
2800 2847 3.244353 ACATGCCTCCTTCCATAAGATCG 60.244 47.826 0.00 0.00 34.37 3.69



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.